ENTRY       zma03060                    Pathway
NAME        Protein export - Zea mays (maize)
DESCRIPTION The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
CLASS       Genetic Information Processing; Folding, sorting and degradation
PATHWAY_MAP zma03060  Protein export
DBLINKS     GO: 0043952 0043953
ORGANISM    Zea mays (maize) [GN:zma]
GENE        103630827  mitochondrial inner membrane protein OXA1-like [KO:K03217]
            100284226  inner membrane protein ALBINO3 [KO:K03217]
            100382702  uncharacterized protein LOC100382702 [KO:K03217]
            100285911  uncharacterized protein LOC100285911 [KO:K03217]
            103625721  ALBINO3-like protein 1, chloroplastic isoform X1 [KO:K03217]
            100216602  uncharacterized protein LOC100216602 isoform 1 [KO:K03217]
            103648919  protein translocase subunit SECA2, chloroplastic [KO:K03070] [EC:7.4.2.8]
            542347  protein translocase subunit SECA1, chloroplastic [KO:K03070] [EC:7.4.2.8]
            100274153  uncharacterized protein LOC100274153 [KO:K03106] [EC:3.6.5.4]
            100274376  uncharacterized protein LOC100274376 [KO:K03106] [EC:3.6.5.4]
            100502496  uncharacterized protein LOC100502496 [KO:K03106] [EC:3.6.5.4]
            103630576  signal recognition particle 54 kDa protein 2 [KO:K03106] [EC:3.6.5.4]
            103654352  signal recognition particle 54 kDa protein, chloroplastic isoform X1 [KO:K03106] [EC:3.6.5.4]
            542753  chloroplast srp54 receptor 1 [KO:K03110]
            542482  preprotein translocase subunit SECY, chloroplastic [KO:K10956]
            100280289  uncharacterized protein LOC100280289 [KO:K10956]
            100276798  uncharacterized protein LOC100276798 [KO:K10956]
            100217058  uncharacterized protein LOC100217058 [KO:K10956]
            100280873  protein transport protein Sec61 beta subunit [KO:K09481]
            100285315  protein transport protein Sec61 beta subunit [KO:K09481]
            100286118  protein transport protein Sec61 beta subunit [KO:K09481]
            103651507  protein transport protein Sec61 subunit beta [KO:K09481]
            100280916  protein transport protein SEC61 gamma subunit [KO:K07342]
            100284544  protein transport protein SEC61 gamma subunit [KO:K07342]
            100282298  protein transport protein SEC61 gamma subunit [KO:K07342]
            100192024  uncharacterized protein LOC100192024 [KO:K07342]
            103625723  protein transporter [KO:K12275]
            100286182  uncharacterized protein LOC100286182 [KO:K12275]
            100384319  uncharacterized protein LOC100384319 [KO:K09540]
            103641549  dnaJ protein ERDJ2 [KO:K09540]
            732809  luminal-binding protein 3 precursor [KO:K09490] [EC:3.6.4.10]
            732808  luminal-binding protein 2 precursor [KO:K09490] [EC:3.6.4.10]
            103625886  heat shock 70 kDa protein BIP2 [KO:K09490] [EC:3.6.4.10]
            103641707  heat shock 70 kDa protein BIP2 [KO:K09490] [EC:3.6.4.10]
            103637376  luminal-binding protein 3-like [KO:K09490] [EC:3.6.4.10]
            109941019  LOW QUALITY PROTEIN: luminal-binding protein 3-like [KO:K09490] [EC:3.6.4.10]
            542750  signal recognition particle 9 kDa protein [KO:K03109]
            100216656  Signal recognition particle protein [KO:K03109]
            100280752  signal recognition particle 14 kDa protein [KO:K03104]
            100382925  uncharacterized protein LOC100382925 [KO:K03108]
            100192526  uncharacterized protein LOC100192526 [KO:K03107]
            100282410  signal recognition particle 19 kDa protein [KO:K03105]
            103645776  signal recognition particle 19 kDa protein [KO:K03105]
            100191673  signal recognition particle receptor homolog 1 [KO:K13431]
            100193087  uncharacterized protein LOC100193087 [KO:K12272]
            100283769  signal recognition particle receptor beta subunit [KO:K12272]
            541789  uncharacterized protein LOC541789 [KO:K03116]
            541788  sec-independent protein translocase protein TATA, chloroplastic [KO:K03116]
            100279882  uncharacterized protein LOC100279882 [KO:K03118]
            103632985  sec-independent protein translocase protein TATC, chloroplastic isoform 2 [KO:K03118]
            100273277  uncharacterized protein LOC100273277 [KO:K03100] [EC:3.4.21.89]
            100283156  uncharacterized protein LOC100283156 [KO:K03100] [EC:3.4.21.89]
            100284377  uncharacterized protein LOC100284377 [KO:K03100] [EC:3.4.21.89]
            103626952  chloroplast processing peptidase [KO:K03100] [EC:3.4.21.89]
            100502377  uncharacterized protein LOC100502377 [KO:K03100] [EC:3.4.21.89]
            100280989  uncharacterized protein LOC100280989 [KO:K12946] [EC:3.4.-.-]
            100285983  uncharacterized protein LOC100285983 [KO:K12946] [EC:3.4.-.-]
            100282505  uncharacterized protein LOC100282505 [KO:K12947] [EC:3.4.-.-]
            100303814  uncharacterized protein LOC100303814 [KO:K12947] [EC:3.4.-.-]
            100274280  Signal peptidase complex subunit 3B [KO:K12948] [EC:3.4.-.-]
            100283950  uncharacterized protein LOC100283950 precursor [KO:K12948] [EC:3.4.-.-]
            100191345  uncharacterized protein LOC100191345 [KO:K13280] [EC:3.4.21.89]
            100273903  uncharacterized protein LOC100273903 [KO:K13280] [EC:3.4.21.89]
            103654093  signal peptidase complex catalytic subunit SEC11C isoform X1 [KO:K13280] [EC:3.4.21.89]
            109942576  signal peptidase complex catalytic subunit SEC11 [KO:K13280] [EC:3.4.21.89]
            100282484  uncharacterized protein LOC100282484 [KO:K09647] [EC:3.4.21.-]
            100384465  mitochondrial inner membrane protease subunit 1 [KO:K09647] [EC:3.4.21.-]
            103651187  mitochondrial inner membrane protease subunit 2 [KO:K09647] [EC:3.4.21.-]
            103631723  mitochondrial inner membrane protease subunit 2 [KO:K09648] [EC:3.4.21.-]
            100857020  uncharacterized protein LOC100857020 precursor [KO:K09648] [EC:3.4.21.-]
            100273900  uncharacterized protein LOC100273900 [KO:K09648] [EC:3.4.21.-]
            118473566  mitochondrial inner membrane protease subunit 2-like [KO:K09648] [EC:3.4.21.-]
REFERENCE   PMID:10087917
  AUTHORS   Dalbey RE, Robinson C.
  TITLE     Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  JOURNAL   Trends Biochem Sci 24:17-22 (1999)
            DOI:10.1016/S0968-0004(98)01333-4
REFERENCE   PMID:10652088
  AUTHORS   Berks BC, Sargent F, Palmer T.
  TITLE     The Tat protein export pathway.
  JOURNAL   Mol Microbiol 35:260-74 (2000)
            DOI:10.1046/j.1365-2958.2000.01719.x
REFERENCE   PMID:10747959
  AUTHORS   Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  TITLE     TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  JOURNAL   J Biol Chem 275:16717-22 (2000)
            DOI:10.1074/jbc.M000800200
REFERENCE   PMID:11007775
  AUTHORS   Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  TITLE     TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  JOURNAL   J Biol Chem 275:41350-7 (2000)
            DOI:10.1074/jbc.M004887200
REFERENCE   PMID:18046402
  AUTHORS   Rapoport TA
  TITLE     Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  JOURNAL   Nature 450:663-9 (2007)
            DOI:10.1038/nature06384
REFERENCE   PMID:17368028
  AUTHORS   Flower AM
  TITLE     The SecY translocation complex: convergence of genetics and structure.
  JOURNAL   Trends Microbiol 15:203-10 (2007)
            DOI:10.1016/j.tim.2007.03.001
REFERENCE   PMID:16212506
  AUTHORS   Osborne AR, Rapoport TA, van den Berg B
  TITLE     Protein translocation by the Sec61/SecY channel.
  JOURNAL   Annu Rev Cell Dev Biol 21:529-50 (2005)
            DOI:10.1146/annurev.cellbio.21.012704.133214
REFERENCE   PMID:12475201
  AUTHORS   Paetzel M, Karla A, Strynadka NC, Dalbey RE
  TITLE     Signal peptidases.
  JOURNAL   Chem Rev 102:4549-80 (2002)
            DOI:10.1021/cr010166y
REFERENCE   PMID:10924740
  AUTHORS   Paetzel M, Dalbey RE, Strynadka NC
  TITLE     The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  JOURNAL   Pharmacol Ther 87:27-49 (2000)
            DOI:10.1016/S0163-7258(00)00064-4
REFERENCE   PMID:17259602
  AUTHORS   Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  TITLE     Archaeal signal peptidases.
  JOURNAL   Microbiology 153:305-14 (2007)
            DOI:10.1099/mic.0.2006/003087-0
REFERENCE   PMID:19299134
  AUTHORS   Desvaux M, Hebraud M, Talon R, Henderson IR
  TITLE     Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  JOURNAL   Trends Microbiol 17:139-45 (2009)
            DOI:10.1016/j.tim.2009.01.004
REFERENCE   PMID:15063851
  AUTHORS   Nakatogawa H, Murakami A, Ito K
  TITLE     Control of SecA and SecM translation by protein secretion.
  JOURNAL   Curr Opin Microbiol 7:145-50 (2004)
            DOI:10.1016/j.mib.2004.01.001
KO_PATHWAY  ko03060
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