ENTRY       sly03250                    Pathway
NAME        Viral life cycle - HIV-1 - Solanum lycopersicum (tomato)
CLASS       Genetic Information Processing; Information processing in viruses
PATHWAY_MAP sly03250  Viral life cycle - HIV-1
ORGANISM    Solanum lycopersicum (tomato) [GN:sly]
GENE        101252985  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 [KO:K22544] [EC:3.1.5.-]
            101249513  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [KO:K22544] [EC:3.1.5.-]
            101250363  peptidyl-prolyl cis-trans isomerase Pin1 [KO:K09578] [EC:5.2.1.8]
            101245005  peptidyl-prolyl cis-trans isomerase Pin1 [KO:K09578] [EC:5.2.1.8]
            101256344  chromatin structure-remodeling complex protein BSH-like isoform X1 [KO:K11648]
            101255453  chromatin structure-remodeling complex protein BSH [KO:K11648]
            104649492  uncharacterized protein LOC104649492 [KO:K14398]
            101251182  LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6 [KO:K14398]
            101251491  cleavage and polyadenylation specificity factor subunit 6 [KO:K14398]
            101251795  cleavage and polyadenylation specificity factor subunit 6-like [KO:K14398]
            101246063  transportin MOS14 isoform X1 [KO:K15436]
            101256535  transportin MOS14 isoform X1 [KO:K15436]
            101251677  probable histone acetyltransferase HAC-like 1 [KO:K04498] [EC:2.3.1.48]
            101259213  probable histone acetyltransferase HAC-like 1 [KO:K04498] [EC:2.3.1.48]
            101252382  histone acetyltransferase HAC1-like isoform X1 [KO:K04498] [EC:2.3.1.48]
            101246749  histone acetyltransferase HAC1-like isoform X1 [KO:K04498] [EC:2.3.1.48]
            101253033  histone acetyltransferase GCN5 isoform X1 [KO:K06062] [EC:2.3.1.48]
            101258485  cyclin-T1-3 [KO:K15188]
            101260979  cyclin-T1-4 [KO:K15188]
            101250904  cyclin-T1-3 [KO:K15188]
            101248963  transcription elongation factor SPT4 homolog 2-like isoform X2 [KO:K15171]
            101260813  putative transcription elongation factor SPT5 homolog 1 [KO:K15172]
            100313952  Xpo1; exportin 1 [KO:K14290]
            778290  RAN2A; GTP-binding nuclear protein Ran2 [KO:K07936]
            778289  RAN1; GTP-binding nuclear protein Ran1 [KO:K07936]
            778291  RAN2B; GTP-binding nuclear protein Ran2 [KO:K07936]
            101266551  protein ELC [KO:K12183]
            101267950  protein ELC-like [KO:K12183]
            101266865  protein ELC-like [KO:K12183]
            101250100  vacuolar protein sorting-associated protein 20 homolog 2 [KO:K12195]
            101264627  vacuolar protein sorting-associated protein 32 homolog 2 [KO:K12194]
            101248169  vacuolar protein sorting-associated protein 32 homolog 2-like [KO:K12194]
            101268300  vacuolar protein sorting-associated protein 32 homolog 2 [KO:K12194]
            101245450  vacuolar-sorting protein BRO1-like [KO:K12200]
            101261621  vacuolar-sorting protein BRO1 [KO:K12200]
            101256349  protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [KO:K12196]
            101246490  SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like protein [KO:K12196]
            101256646  protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [KO:K12196]
REFERENCE   PMID:27357278
  AUTHORS   Li G, De Clercq E
  TITLE     HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  JOURNAL   Microbiol Mol Biol Rev 80:679-731 (2016)
            DOI:10.1128/MMBR.00065-15
REFERENCE   PMID:21284899
  AUTHORS   Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  TITLE     Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  JOURNAL   J Transl Med 9 Suppl 1:S1 (2011)
            DOI:10.1186/1479-5876-9-S1-S1
REFERENCE   PMID:31028522
  AUTHORS   Novikova M, Zhang Y, Freed EO, Peng K
  TITLE     Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  JOURNAL   Virol Sin 34:119-134 (2019)
            DOI:10.1007/s12250-019-00095-3
REFERENCE   PMID:30286189
  AUTHORS   Rawle DJ, Harrich D
  TITLE     Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  JOURNAL   PLoS Pathog 14:e1007270 (2018)
            DOI:10.1371/journal.ppat.1007270
REFERENCE   PMID:25036886
  AUTHORS   Le Sage V, Mouland AJ, Valiente-Echeverria F
  TITLE     Roles of HIV-1 capsid in viral replication and immune evasion.
  JOURNAL   Virus Res 193:116-29 (2014)
            DOI:10.1016/j.virusres.2014.07.010
REFERENCE   PMID:32429351
  AUTHORS   Murphy RE, Saad JS
  TITLE     The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  JOURNAL   Viruses 12:E548 (2020)
            DOI:10.3390/v12050548
REFERENCE   PMID:21360054
  AUTHORS   He N, Zhou Q
  TITLE     New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  JOURNAL   J Neuroimmune Pharmacol 6:260-8 (2011)
            DOI:10.1007/s11481-011-9267-6
REFERENCE   PMID:19865606
  AUTHORS   Pincetic A, Leis J
  TITLE     The Mechanism of Budding of Retroviruses From Cell Membranes.
  JOURNAL   Adv Virol 2009:6239691-6239699 (2009)
            DOI:10.1155/2009/623969
REFERENCE   PMID:32858867
  AUTHORS   Kleinpeter AB, Freed EO
  TITLE     HIV-1 Maturation: Lessons Learned from Inhibitors.
  JOURNAL   Viruses 12:E940 (2020)
            DOI:10.3390/v12090940
REL_PATHWAY sly03013  Nucleocytoplasmic transport
            sly04144  Endocytosis
KO_PATHWAY  ko03250
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