ENTRY       sly00564                    Pathway
NAME        Glycerophospholipid metabolism - Solanum lycopersicum (tomato)
CLASS       Metabolism; Lipid metabolism
PATHWAY_MAP sly00564  Glycerophospholipid metabolism
DBLINKS     GO: 0006650
ORGANISM    Solanum lycopersicum (tomato) [GN:sly]
GENE        101264154  probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [KO:K00006] [EC:1.1.1.8]
            101253049  glycerol-3-phosphate dehydrogenase [NAD(+)] isoform X1 [KO:K00006] [EC:1.1.1.8]
            101253092  glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic isoform X1 [KO:K00006] [EC:1.1.1.8]
            101260923  probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [KO:K00006] [EC:1.1.1.8]
            101244050  glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X2 [KO:K00111] [EC:1.1.5.3]
            101256206  glycerol-3-phosphate acyltransferase 9 [KO:K13506] [EC:2.3.1.15]
            543901  GPAT; glycerol-3-phosphate acyltransferase [KO:K00630] [EC:2.3.1.15]
            101254424  glycerol-3-phosphate 2-O-acyltransferase 4 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
            101249731  glycerol-3-phosphate acyltransferase 5-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
            101251501  GPAT6; glycerol-3-phosphate 2-O-acyltransferase 6 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
            101257357  glycerol-3-phosphate acyltransferase 5-like [KO:K13508] [EC:2.3.1.15 2.3.1.198]
            101247838  glycerol-3-phosphate acyltransferase 1 [KO:K13508] [EC:2.3.1.15 2.3.1.198]
            101267419  1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [KO:K00655] [EC:2.3.1.51]
            101249615  1-acyl-sn-glycerol-3-phosphate acyltransferase 2 [KO:K13523] [EC:2.3.1.51 2.3.1.-]
            101261177  1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like isoform X1 [KO:K13523] [EC:2.3.1.51 2.3.1.-]
            101251846  1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 isoform X1 [KO:K13523] [EC:2.3.1.51 2.3.1.-]
            101261466  probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 [KO:K13513] [EC:2.3.1.- 2.3.1.51]
            101248193  probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [KO:K13513] [EC:2.3.1.- 2.3.1.51]
            101262395  lysophospholipid acyltransferase 1-like [KO:K13519] [EC:2.3.1.51 2.3.1.23 2.3.1.-]
            101246167  lysophospholipid acyltransferase 1 [KO:K13519] [EC:2.3.1.51 2.3.1.23 2.3.1.-]
            101249665  lysophospholipid acyltransferase 1 [KO:K13519] [EC:2.3.1.51 2.3.1.23 2.3.1.-]
            101263951  triacylglycerol lipase SDP1 [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
            101255254  triacylglycerol lipase SDP1-like [KO:K14674] [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]
            101246124  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
            101243737  phosphatidate phosphatase PAH1-like isoform X2 [KO:K15728] [EC:3.1.3.4]
            101261812  phosphatidate phosphatase PAH2-like isoform X1 [KO:K15728] [EC:3.1.3.4]
            101256049  phosphatidate phosphatase PAH1-like isoform X1 [KO:K15728] [EC:3.1.3.4]
            101257361  probable lipid phosphate phosphatase 4 isoform X2 [KO:K18693] [EC:3.6.1.75 3.1.3.4]
            101267988  lipid phosphate phosphatase 2 [KO:K18693] [EC:3.6.1.75 3.1.3.4]
            101268277  lipid phosphate phosphatase 2-like [KO:K18693] [EC:3.6.1.75 3.1.3.4]
            101260497  lipid phosphate phosphatase 2 isoform X2 [KO:K18693] [EC:3.6.1.75 3.1.3.4]
            101268570  putative lipid phosphate phosphatase 3, chloroplastic isoform X2 [KO:K18693] [EC:3.6.1.75 3.1.3.4]
            101256961  diacylglycerol kinase 1-like isoform X1 [KO:K00901] [EC:2.7.1.107]
            101243786  diacylglycerol kinase 2 [KO:K00901] [EC:2.7.1.107]
            101257014  diacylglycerol kinase 5 [KO:K00901] [EC:2.7.1.107]
            101253668  diacylglycerol kinase 5-like [KO:K00901] [EC:2.7.1.107]
            101243968  diacylglycerol kinase 1-like [KO:K00901] [EC:2.7.1.107]
            544171  DGK1; calmodulin-binding diacylglycerol kinase LeCBDGK [KO:K00901] [EC:2.7.1.107]
            101262422  diacylglycerol kinase 7 [KO:K00901] [EC:2.7.1.107]
            101264835  diacylglycerol kinase 7 [KO:K00901] [EC:2.7.1.107]
            101259566  non-specific phospholipase C2 [KO:K01114] [EC:3.1.4.3]
            101248078  non-specific phospholipase C6 [KO:K01114] [EC:3.1.4.3]
            101244700  non-specific phospholipase C1-like [KO:K01114] [EC:3.1.4.3]
            101265364  phospholipase D zeta 1 isoform X1 [KO:K01115] [EC:3.1.4.4]
            101260675  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
            101245304  LOW QUALITY PROTEIN: phospholipase D zeta 1 [KO:K01115] [EC:3.1.4.4]
            101246303  phospholipase D delta [KO:K01115] [EC:3.1.4.4]
            101244067  phospholipase D alpha 4 [KO:K01115] [EC:3.1.4.4]
            101248969  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
            101249590  phospholipase D gamma 1-like [KO:K01115] [EC:3.1.4.4]
            101253987  phospholipase D alpha 1 [KO:K01115] [EC:3.1.4.4]
            101256058  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
            101257989  TPLD; phospholipase D alpha [KO:K01115] [EC:3.1.4.4]
            101264185  phospholipase D alpha 1-like [KO:K01115] [EC:3.1.4.4]
            101264680  phospholipase D delta-like [KO:K01115] [EC:3.1.4.4]
            544251  PLDa2; phospholipase PLDa2 [KO:K01115] [EC:3.1.4.4]
            543821  PLDb2; phospholipase PLDb2 [KO:K01115] [EC:3.1.4.4]
            543819  PLDa1; phospholipase PLDa1 [KO:K01115] [EC:3.1.4.4]
            544181  PLDb1; phospholipase PLDb1 [KO:K01115] [EC:3.1.4.4]
            101264238  phospholipase D Z [KO:K16860] [EC:3.1.4.4]
            101252788  phospholipase A2-alpha [KO:K01047] [EC:3.1.1.4]
            101267740  lysophospholipid acyltransferase LPEAT2 [KO:K13510] [EC:2.3.1.23 2.3.1.67]
            101251880  lysophospholipid acyltransferase LPEAT1 isoform X2 [KO:K13510] [EC:2.3.1.23 2.3.1.67]
            101244190  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
            101256040  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
            101249029  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
            101243895  phospholipase A(1) DAD1, chloroplastic-like [KO:K16818] [EC:3.1.1.32]
            101248256  phospholipase A(1) LCAT3 [KO:K22389] [EC:3.1.1.32]
            544234  lecithine cholesterol acyltransferase-like protein [KO:K22389] [EC:3.1.1.32]
            101261789  acyl-protein thioesterase 2-like [KO:K06130] [EC:3.1.1.5]
            101243765  acyl-protein thioesterase 2 [KO:K06130] [EC:3.1.1.5]
            101266950  acyl-protein thioesterase 2-like isoform X1 [KO:K06130] [EC:3.1.1.5]
            101264846  acyl-protein thioesterase 1 homolog 1-like isoform X1 [KO:K06130] [EC:3.1.1.5]
            101264545  glycerophosphodiester phosphodiesterase GDPD3-like isoform X1 [KO:K18696] [EC:3.1.4.46]
            101261081  glycerophosphodiester phosphodiesterase GDPD1, chloroplastic [KO:K18696] [EC:3.1.4.46]
            101261241  glycerophosphodiester phosphodiesterase GDPD6 [KO:K01126] [EC:3.1.4.46]
            101256870  probable choline kinase 1 [KO:K14156] [EC:2.7.1.32 2.7.1.82]
            101264888  choline-phosphate cytidylyltransferase 1 [KO:K00968] [EC:2.7.7.15]
            101262912  serine decarboxylase [KO:K25193] [EC:4.1.1.-]
            101258577  probable ethanolamine kinase [KO:K00894] [EC:2.7.1.82]
            101265643  ethanolamine-phosphate cytidylyltransferase [KO:K00967] [EC:2.7.7.14]
            101255745  ethanolamine-phosphate cytidylyltransferase [KO:K00967] [EC:2.7.7.14]
            101248311  ethanolamine-phosphate cytidylyltransferase [KO:K00967] [EC:2.7.7.14]
            101247110  phosphomethylethanolamine N-methyltransferase isoform X1 [KO:K05929] [EC:2.1.1.103]
            101246730  phosphoethanolamine N-methyltransferase [KO:K05929] [EC:2.1.1.103]
            543681  phosphoethanolamine N-methyltransferase [KO:K05929] [EC:2.1.1.103]
            101257780  phosphatidyl-N-methylethanolamine N-methyltransferase [KO:K00550] [EC:2.1.1.71]
            101245291  phosphatidate cytidylyltransferase 4, chloroplastic [KO:K00981] [EC:2.7.7.41]
            101259812  phosphatidate cytidylyltransferase 1 [KO:K00981] [EC:2.7.7.41]
            101244032  phosphatidate cytidylyltransferase 1-like [KO:K00981] [EC:2.7.7.41]
            101264650  LOW QUALITY PROTEIN: phosphatidate cytidylyltransferase 1 [KO:K00981] [EC:2.7.7.41]
            101251081  CDP-diacylglycerol--serine O-phosphatidyltransferase 1 isoform X1 [KO:K08730] [EC:2.7.8.29]
            101264518  CDP-diacylglycerol--serine O-phosphatidyltransferase 1-like [KO:K08730] [EC:2.7.8.29]
            101266981  phosphatidylserine decarboxylase proenzyme 2 isoform X2 [KO:K01613] [EC:4.1.1.65]
            543838  phosphatidylserine decarboxylase [KO:K01613] [EC:4.1.1.65]
            101255984  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 isoform X1 [KO:K00995] [EC:2.7.8.5]
            101255486  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [KO:K00995] [EC:2.7.8.5]
            101261489  uncharacterized protein LOC101261489 [KO:K01094] [EC:3.1.3.27]
            101255115  uncharacterized protein LOC101255115 isoform X1 [KO:K01094] [EC:3.1.3.27]
            101257308  cardiolipin synthase (CMP-forming), mitochondrial [KO:K08744] [EC:2.7.8.41]
            101254534  tafazzin [KO:K13511] [EC:2.3.1.-]
            101267193  N-acylphosphatidylethanolamine synthase isoform X1 [KO:K13511] [EC:2.3.1.-]
            101255609  probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 [KO:K00999] [EC:2.7.8.11]
COMPOUND    C00040  Acyl-CoA
            C00065  L-Serine
            C00084  Acetaldehyde
            C00093  sn-Glycerol 3-phosphate
            C00111  Glycerone phosphate
            C00114  Choline
            C00157  Phosphatidylcholine
            C00189  Ethanolamine
            C00269  CDP-diacylglycerol
            C00307  CDP-choline
            C00344  Phosphatidylglycerol
            C00346  Ethanolamine phosphate
            C00350  Phosphatidylethanolamine
            C00416  Phosphatidate
            C00513  CDP-glycerol
            C00570  CDP-ethanolamine
            C00588  Choline phosphate
            C00623  sn-Glycerol 1-phosphate
            C00641  1,2-Diacyl-sn-glycerol
            C00670  sn-Glycero-3-phosphocholine
            C00681  1-Acyl-sn-glycerol 3-phosphate
            C01194  1-Phosphatidyl-D-myo-inositol
            C01210  N-Methylethanolamine phosphate
            C01233  sn-Glycero-3-phosphoethanolamine
            C01241  Phosphatidyl-N-methylethanolamine
            C01996  Acetylcholine
            C02737  Phosphatidylserine
            C03372  Acylglycerone phosphate
            C03819  1-Acylglycerophosphoinositol
            C03872  L-Serine-phosphoethanolamine
            C03892  Phosphatidylglycerophosphate
            C03974  2-Acyl-sn-glycerol 3-phosphate
            C04230  1-Acyl-sn-glycero-3-phosphocholine
            C04233  2-Acyl-sn-glycero-3-phosphocholine
            C04308  Phosphatidyl-N-dimethylethanolamine
            C04438  1-Acyl-sn-glycero-3-phosphoethanolamine
            C04590  3-(O-Geranylgeranyl)-sn-glycerol 1-phosphate
            C04638  2,3-Bis-(O-geranylgeranyl)-sn-glycerol 1-phosphate
            C05973  2-Acyl-sn-glycero-3-phosphoethanolamine
            C05974  2-Acyl-sn-glycero-3-phosphoserine
            C05976  Aminoacyl-phosphatidylglycerol
            C05980  Cardiolipin
            C06771  Triethanolamine
            C06772  Diethanolamine
            C13482  Phosphodimethylethanolamine
            C18059  CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol
            C18125  1-Acyl-sn-glycero-3-phosphoserine
            C18126  1-Acyl-sn-glycero-3-phosphoglycerol
            C18129  Monolysocardiolipin
            C18168  Diacylglycerylhomoserine
            C18169  Diacylglyceryl-N,N,N-trimethylhomoserine
            C20466  2,3-Bis-(O-geranylgeranyl)-sn-glycero-1-phospho-L-serine
            C20518  2,3-Bis-(O-phytanyl)-sn-glycerol 1-phosphate
            C22340  Heptaprenylglyceryl phosphate
            C22341  Heptaprenylglycerol
            C22342  Diacetylheptaprenylglycerol
REFERENCE   PMID:1512203
  AUTHORS   Racenis PV, Lai JL, Das AK, Mullick PC, Hajra AK, Greenberg ML.
  TITLE     The acyl dihydroxyacetone phosphate pathway enzymes for glycerolipid biosynthesis are present in the yeast Saccharomyces cerevisiae.
  JOURNAL   J Bacteriol 174:5702-10 (1992)
            DOI:10.1128/JB.174.17.5702-5710.1992
REFERENCE   PMID:10092508
  AUTHORS   Taniyama Y, Shibata S, Kita S, Horikoshi K, Fuse H, Shirafuji H, Sumino Y, Fujino M.
  TITLE     Cloning and expression of a novel lysophospholipase which structurally resembles lecithin cholesterol acyltransferase.
  JOURNAL   Biochem Biophys Res Commun 257:50-6 (1999)
            DOI:10.1006/bbrc.1999.0411
REFERENCE   PMID:10542045
  AUTHORS   Athenstaedt K, Daum G.
  TITLE     Phosphatidic acid, a key intermediate in lipid metabolism.
  JOURNAL   Eur J Biochem 266:1-16 (1999)
            DOI:10.1046/j.1432-1327.1999.00822.x
REFERENCE   PMID:12431977
  AUTHORS   Shields DJ, Lehner R, Agellon LB, Vance DE.
  TITLE     Membrane topography of human phosphatidylethanolamine N-methyltransferase.
  JOURNAL   J Biol Chem 278:2956-62 (2003)
            DOI:10.1074/jbc.M210904200
REFERENCE   PMID:14663079
  AUTHORS   Martinez-Morales F, Schobert M, Lopez-Lara IM, Geiger O.
  TITLE     Pathways for phosphatidylcholine biosynthesis in bacteria.
  JOURNAL   Microbiology 149:3461-71 (2003)
            DOI:10.1099/mic.0.26522-0
REFERENCE   PMID:15522832
  AUTHORS   Burgermeister M, Birner-Grunberger R, Nebauer R, Daum G.
  TITLE     Contribution of different pathways to the supply of phosphatidylethanolamine and phosphatidylcholine to mitochondrial membranes of the yeast Saccharomyces cerevisiae.
  JOURNAL   Biochim Biophys Acta 1686:161-8 (2004)
            DOI:10.1016/j.bbalip.2004.09.007
REFERENCE   PMID:1649829
  AUTHORS   Hsu L, Jackowski S, Rock CO
  TITLE     Isolation and characterization of Escherichia coli K-12 mutants lacking both 2-acyl-glycerophosphoethanolamine acyltransferase and acyl-acyl carrier protein synthetase activity.
  JOURNAL   J Biol Chem 266:13783-8 (1991)
REFERENCE   PMID:10938271
  AUTHORS   Stone SJ, Vance JE.
  TITLE     Phosphatidylserine synthase-1 and -2 are localized to mitochondria-associated membranes.
  JOURNAL   J Biol Chem 275:34534-40 (2000)
            DOI:10.1074/jbc.M002865200
REL_PATHWAY sly00010  Glycolysis / Gluconeogenesis
            sly00260  Glycine, serine and threonine metabolism
            sly00561  Glycerolipid metabolism
            sly00562  Inositol phosphate metabolism
            sly00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
            sly00565  Ether lipid metabolism
            sly00620  Pyruvate metabolism
KO_PATHWAY  ko00564
///
