ENTRY       sly00330                    Pathway
NAME        Arginine and proline metabolism - Solanum lycopersicum (tomato)
CLASS       Metabolism; Amino acid metabolism
PATHWAY_MAP sly00330  Arginine and proline metabolism
MODULE      sly_M00015  Proline biosynthesis, glutamate => proline [PATH:sly00330]
            sly_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:sly00330]
DBLINKS     GO: 0006525 0006560
ORGANISM    Solanum lycopersicum (tomato) [GN:sly]
GENE        543807  adc1; arginine decarboxylase [KO:K01583] [EC:4.1.1.19]
            543960  ADC; arginine decarboxylase [KO:K01583] [EC:4.1.1.19]
            101267493  agmatine deiminase [KO:K10536] [EC:3.5.3.12]
            544141  CPA; N-carbamoylputrescine amidase [KO:K12251] [EC:3.5.1.53]
            544209  ODC; ornithine decarboxylase [KO:K01581] [EC:4.1.1.17]
            101255673  ornithine decarboxylase-like [KO:K01581] [EC:4.1.1.17]
            101265415  ornithine decarboxylase-like [KO:K01581] [EC:4.1.1.17]
            101263807  spermidine synthase 1 [KO:K00797] [EC:2.5.1.16]
            101247725  spermidine synthase 2-like [KO:K00797] [EC:2.5.1.16]
            544177  spdsyn; spermidine synthase [KO:K00797] [EC:2.5.1.16]
            543894  SPM1; SPM1 protein [KO:K00797] [EC:2.5.1.16]
            101265860  S-adenosylmethionine decarboxylase proenzyme 4 [KO:K01611] [EC:4.1.1.50]
            101260400  S-adenosylmethionine decarboxylase 2 [KO:K01611] [EC:4.1.1.50]
            100134880  SAMDC; S-adenosylmethionine decarboxylase [KO:K01611] [EC:4.1.1.50]
            101262142  S-adenosylmethionine decarboxylase proenzyme-like [KO:K01611] [EC:4.1.1.50]
            101265343  S-adenosylmethionine decarboxylase proenzyme 4-like [KO:K01611] [EC:4.1.1.50]
            101249640  probable polyamine oxidase 5 [KO:K12259] [EC:1.5.3.16 1.5.3.-]
            101266198  probable polyamine oxidase 5 [KO:K12259] [EC:1.5.3.16 1.5.3.-]
            101244015  probable polyamine oxidase 5 [KO:K12259] [EC:1.5.3.16 1.5.3.-]
            101253022  polyamine oxidase 1 [KO:K13366] [EC:1.5.3.14 1.5.3.16 1.5.3.-]
            101264170  probable polyamine oxidase 4 [KO:K17839] [EC:1.5.3.17 1.5.3.-]
            101252005  probable polyamine oxidase 2 [KO:K17839] [EC:1.5.3.17 1.5.3.-]
            101258232  probable polyamine oxidase 4 [KO:K17839] [EC:1.5.3.17 1.5.3.-]
            101260014  probable polyamine oxidase 2 [KO:K17839] [EC:1.5.3.17 1.5.3.-]
            104645747  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
            101247085  glutaredoxin-C3 [KO:K00128] [EC:1.2.1.3]
            101250104  ALDH2B7a; aldehyde dehydrogenase family 2 member B7a [KO:K00128] [EC:1.2.1.3]
            101262822  ALD3H1; aldehyde dehydrogenase family 3 member H2 [KO:K00128] [EC:1.2.1.3]
            101267634  ADH3F1a; aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
            101250474  aldehyde dehydrogenase family 2 member B7, mitochondrial [KO:K00128] [EC:1.2.1.3]
            101254485  ADH2B7d; aldehyde dehydrogenase family 2 member B7d [KO:K00128] [EC:1.2.1.3]
            101257095  aldehyde dehydrogenase family 2 member B7, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
            112940646  aldehyde dehydrogenase family 3 member F1-like [KO:K00128] [EC:1.2.1.3]
            101252968  aldehyde dehydrogenase family 7 member B4 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
            109119323  probable amidase At4g34880 [KO:K01426] [EC:3.5.1.4]
            101255659  probable amidase At4g34880 [KO:K01426] [EC:3.5.1.4]
            101257218  probable amidase At4g34880 [KO:K01426] [EC:3.5.1.4]
            104644402  amidase 1 [KO:K01426] [EC:3.5.1.4]
            778272  putative nitric oxide synthase [KO:K13427] [EC:1.14.13.39]
            544271  ARG2; arginase 2 [KO:K01476] [EC:3.5.3.1]
            543944  ARG1; arginase 1 [KO:K01476] [EC:3.5.3.1]
            778331  OAT; ornithine aminotransferase [KO:K00819] [EC:2.6.1.13]
            101261090  pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
            101268445  proline dehydrogenase 2, mitochondrial [KO:K00318] [EC:1.5.5.2]
            778202  PDH; proline dehydrogenase [KO:K00318] [EC:1.5.5.2]
            101250515  ADH12A1; probable aldehyde dehydrogenase [KO:K00294] [EC:1.2.1.88]
            544281  PRO2; delta-1-pyrroline-5-carboxylate synthase [KO:K12657] [EC:2.7.2.11 1.2.1.41]
            101244293  delta-1-pyrroline-5-carboxylate synthase-like isoform X2 [KO:K12657] [EC:2.7.2.11 1.2.1.41]
            101246987  proline iminopeptidase [KO:K01259] [EC:3.4.11.5]
            101244118  probable prolyl 4-hydroxylase 4 [KO:K00472] [EC:1.14.11.2]
            101262682  probable prolyl 4-hydroxylase 6 [KO:K00472] [EC:1.14.11.2]
            101254254  probable prolyl 4-hydroxylase 9 [KO:K00472] [EC:1.14.11.2]
            101267095  probable prolyl 4-hydroxylase 10 [KO:K00472] [EC:1.14.11.2]
            101246711  probable prolyl 4-hydroxylase 3 [KO:K00472] [EC:1.14.11.2]
            101259696  prolyl 4-hydroxylase 1 isoform X1 [KO:K00472] [EC:1.14.11.2]
            101255367  probable prolyl 4-hydroxylase 12 [KO:K00472] [EC:1.14.11.2]
            101249044  probable prolyl 4-hydroxylase 6 [KO:K00472] [EC:1.14.11.2]
            101245118  probable prolyl 4-hydroxylase 10 [KO:K00472] [EC:1.14.11.2]
            101244153  probable prolyl 4-hydroxylase 9 [KO:K00472] [EC:1.14.11.2]
            101265933  probable prolyl 4-hydroxylase 4 [KO:K00472] [EC:1.14.11.2]
            101244012  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
            101260072  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
            101264873  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
            101244094  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
            101261642  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
COMPOUND    C00012  Peptide
            C00019  S-Adenosyl-L-methionine
            C00022  Pyruvate
            C00025  L-Glutamate
            C00048  Glyoxylate
            C00062  L-Arginine
            C00077  L-Ornithine
            C00086  Urea
            C00134  Putrescine
            C00148  L-Proline
            C00179  Agmatine
            C00213  Sarcosine
            C00223  p-Coumaroyl-CoA
            C00300  Creatine
            C00315  Spermidine
            C00334  4-Aminobutanoate
            C00406  Feruloyl-CoA
            C00431  5-Aminopentanoate
            C00436  N-Carbamoylputrescine
            C00441  L-Aspartate 4-semialdehyde
            C00533  Nitric oxide
            C00555  4-Aminobutyraldehyde
            C00581  Guanidinoacetate
            C00750  Spermine
            C00763  D-Proline
            C00791  Creatinine
            C00884  Homocarnosine
            C00986  1,3-Diaminopropane
            C01035  4-Guanidinobutanoate
            C01043  N-Carbamoylsarcosine
            C01110  5-Amino-2-oxopentanoic acid
            C01137  S-Adenosylmethioninamine
            C01157  Hydroxyproline
            C01165  L-Glutamate 5-semialdehyde
            C01250  N-Acetyl-L-glutamate 5-semialdehyde
            C01682  Nopaline
            C02305  Phosphocreatine
            C02565  N-Methylhydantoin
            C02647  4-Guanidinobutanal
            C02714  N-Acetylputrescine
            C02946  4-Acetamidobutanoate
            C03078  4-Guanidinobutanamide
            C03166  Phosphoguanidinoacetate
            C03287  L-Glutamyl 5-phosphate
            C03296  N2-Succinyl-L-arginine
            C03375  Norspermidine
            C03415  N2-Succinyl-L-ornithine
            C03564  1-Pyrroline-2-carboxylate
            C03771  5-Guanidino-2-oxopentanoate
            C03912  (S)-1-Pyrroline-5-carboxylate
            C04137  Octopine
            C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
            C05147  trans-3-Hydroxy-L-proline
            C05931  N-Succinyl-L-glutamate
            C05932  N-Succinyl-L-glutamate 5-semialdehyde
            C05933  N(omega)-Hydroxyarginine
            C05936  N4-Acetylaminobutanal
            C05938  L-4-Hydroxyglutamate semialdehyde
            C05945  L-Arginine phosphate
            C05946  (4R)-4-Hydroxy-2-oxoglutarate
            C05947  L-erythro-4-Hydroxyglutamate
            C10497  Feruloylputrescine
            C15699  gamma-L-Glutamylputrescine
            C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
            C15767  4-(L-gamma-Glutamylamino)butanoate
            C18172  Carboxyspermidine
            C18174  Carboxynorspermidine
            C18326  p-Coumaroylputrescine
            C19706  cis-3-Hydroxy-L-proline
REFERENCE   PMID:5288244
  AUTHORS   Haake P, Allen GW.
  TITLE     Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  JOURNAL   Proc Natl Acad Sci U S A 68:2691-3 (1971)
            DOI:10.1073/pnas.68.11.2691
REFERENCE   PMID:16499623
  AUTHORS   Kurihara S, Oda S, Kumagai H, Suzuki H.
  TITLE     Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  JOURNAL   FEMS Microbiol Lett 256:318-23 (2006)
            DOI:10.1111/j.1574-6968.2006.00137.x
REFERENCE   PMID:15590624
  AUTHORS   Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  TITLE     A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  JOURNAL   J Biol Chem 280:4602-8 (2005)
            DOI:10.1074/jbc.M411114200
REL_PATHWAY sly00020  Citrate cycle (TCA cycle)
            sly00220  Arginine biosynthesis
            sly00250  Alanine, aspartate and glutamate metabolism
            sly00260  Glycine, serine and threonine metabolism
            sly00270  Cysteine and methionine metabolism
            sly00310  Lysine degradation
            sly00410  beta-Alanine metabolism
            sly00470  D-Amino acid metabolism
            sly00480  Glutathione metabolism
            sly00630  Glyoxylate and dicarboxylate metabolism
            sly00650  Butanoate metabolism
            sly00770  Pantothenate and CoA biosynthesis
            sly00960  Tropane, piperidine and pyridine alkaloid biosynthesis
KO_PATHWAY  ko00330
///
