ENTRY       sly00230                    Pathway
NAME        Purine metabolism - Solanum lycopersicum (tomato)
CLASS       Metabolism; Nucleotide metabolism
PATHWAY_MAP sly00230  Purine metabolism
MODULE      sly_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sly00230]
            sly_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sly00230]
            sly_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sly00230]
            sly_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sly00230]
            sly_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sly00230]
DBLINKS     GO: 0006163 0042278
ORGANISM    Solanum lycopersicum (tomato) [GN:sly]
GENE        101246124  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
            101263980  nudix hydrolase 23, chloroplastic isoform X6 [KO:K18453] [EC:3.6.1.13 3.6.1.18]
            101256314  nudix hydrolase 14, chloroplastic [KO:K18447] [EC:3.6.1.21]
            101267287  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
            101267885  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
            101263060  ribose-phosphate pyrophosphokinase 1 isoform X1 [KO:K00948] [EC:2.7.6.1]
            101244195  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
            101262942  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
            101250934  amidophosphoribosyltransferase, chloroplastic [KO:K00764] [EC:2.4.2.14]
            101266758  amidophosphoribosyltransferase, chloroplastic-like [KO:K00764] [EC:2.4.2.14]
            101265372  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
            101252648  phosphoribosylglycinamide formyltransferase, chloroplastic [KO:K00601] [EC:2.1.2.2]
            101268249  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
            101246417  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [KO:K01933] [EC:6.3.3.1]
            101255944  phosphoribosylaminoimidazole carboxylase, chloroplastic-like [KO:K11808] [EC:4.1.1.21]
            101262799  phosphoribosylaminoimidazole carboxylase, chloroplastic-like [KO:K11808] [EC:4.1.1.21]
            101258302  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [KO:K01923] [EC:6.3.2.6]
            101263129  uncharacterized protein LOC101263129 [KO:K01756] [EC:4.3.2.2]
            100316897  IMPCHase; putative inosine monophosphate cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
            101260722  adenine phosphoribosyltransferase 1 [KO:K00759] [EC:2.4.2.7]
            101248507  adenine phosphoribosyltransferase 4 [KO:K00759] [EC:2.4.2.7]
            101263094  uncharacterized protein LOC101263094 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            101253828  uncharacterized protein LOC101253828 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            101267031  uncharacterized protein LOC101267031 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            101261528  uncharacterized protein LOC101261528 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            101261826  uncharacterized protein LOC101261826 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            101262298  uncharacterized protein LOC101262298 [KO:K00760] [EC:2.4.2.8]
            101266279  inosine-5'-monophosphate dehydrogenase 2 [KO:K00088] [EC:1.1.1.205]
            101244761  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
            544095  NDK; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
            101262221  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
            104648939  nucleoside diphosphate kinase 3 [KO:K00940] [EC:2.7.4.6]
            101260252  nucleoside diphosphate kinase 3 [KO:K00940] [EC:2.7.4.6]
            101268182  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
            101252471  probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
            101250072  apyrase isoform X1 [KO:K14641] [EC:3.6.1.5]
            101249402  apyrase-like [KO:K14641] [EC:3.6.1.5]
            109119465  apyrase-like [KO:K14641] [EC:3.6.1.5]
            101258050  apyrase [KO:K14641] [EC:3.6.1.5]
            101262543  apyrase 2 [KO:K14641] [EC:3.6.1.5]
            101254338  inosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
            101252744  xanthine dehydrogenase 1-like isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
            101252457  xanthine dehydrogenase 1-like [KO:K00106] [EC:1.17.1.4 1.17.3.2]
            101256508  uncharacterized protein LOC101256508 [KO:K01951] [EC:6.3.5.2]
            101248066  guanylate kinase 2, chloroplastic/mitochondrial [KO:K00942] [EC:2.7.4.8]
            101261672  guanylate kinase 2-like [KO:K00942] [EC:2.7.4.8]
            101246321  guanylate kinase [KO:K00942] [EC:2.7.4.8]
            101249065  ribonucleoside-diphosphate reductase large subunit-like [KO:K10807] [EC:1.17.4.1]
            101263997  ribonucleoside-diphosphate reductase large subunit isoform X1 [KO:K10807] [EC:1.17.4.1]
            101261156  ribonucleoside-diphosphate reductase small chain A-like [KO:K10808] [EC:1.17.4.1]
            101268630  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            101246425  HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
            101257084  HD domain-containing protein 2 [KO:K07023] [EC:3.1.3.89]
            112940880  uncharacterized protein LOC112940880 [KO:K01514] [EC:3.6.1.11]
            101250287  probable GTP diphosphokinase CRSH, chloroplastic [KO:K00951] [EC:2.7.6.5]
            101253322  putative GTP diphosphokinase RSH1, chloroplastic isoform X4 [KO:K00951] [EC:2.7.6.5]
            101251456  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
            101266068  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
            101253148  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
            101258802  adenylosuccinate synthetase, chloroplastic [KO:K01939] [EC:6.3.4.4]
            101246464  adenosine monophosphate deaminase [KO:K01490] [EC:3.5.4.6]
            101254382  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
            101251530  adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
            101244800  adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
            101251751  nucleoside/nucleotide kinase superfamily protein [KO:K00939] [EC:2.7.4.3]
            101246297  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
            101265630  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            101261649  adenylate kinase [KO:K00939] [EC:2.7.4.3]
            101254478  probable adenylate kinase 6, chloroplastic [KO:K00939] [EC:2.7.4.3]
            101248270  adenylate kinase 5, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
            101253795  adenylate kinase, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
            101264422  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            101055607  Hop-interacting protein THI105 [KO:K18532] [EC:2.7.4.3]
            101260825  adenylate kinase isoenzyme 6 homolog isoform X2 [KO:K18532] [EC:2.7.4.3]
            101263792  uncharacterized protein LOC101263792 [KO:K06928] [EC:3.6.1.15]
            101247040  ectonucleotide pyrophosphatase/phosphodiesterase family member 3-like [KO:K01513] [EC:3.1.4.1 3.6.1.9]
            101251711  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [KO:K01522] [EC:3.6.1.29]
            101256557  ATP sulfurylase 1, chloroplastic [KO:K13811] [EC:2.7.7.4 2.7.1.25]
            101259979  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
            101256255  ATP sulfurylase 1, chloroplastic-like [KO:K13811] [EC:2.7.7.4 2.7.1.25]
            101247286  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
            101267663  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
            101262973  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
            100037732  urate oxidase [KO:K00365] [EC:1.7.3.3]
            101253420  uric acid degradation bifunctional protein TTL isoform X1 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
            101245519  allantoinase [KO:K01466] [EC:3.5.2.5]
            101266592  allantoate deiminase 2 [KO:K02083] [EC:3.5.3.9]
            101248901  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
            101246378  ureidoglycolate hydrolase [KO:K18151] [EC:3.5.1.116]
            101264119  urease isoform X1 [KO:K01427] [EC:3.5.1.5]
COMPOUND    C00002  ATP
            C00008  ADP
            C00011  CO2
            C00014  Ammonia
            C00020  AMP
            C00035  GDP
            C00037  Glycine
            C00039  DNA
            C00044  GTP
            C00046  RNA
            C00048  Glyoxylate
            C00053  3'-Phosphoadenylyl sulfate
            C00054  Adenosine 3',5'-bisphosphate
            C00059  Sulfate
            C00064  L-Glutamine
            C00081  ITP
            C00086  Urea
            C00104  IDP
            C00117  D-Ribose 5-phosphate
            C00119  5-Phospho-alpha-D-ribose 1-diphosphate
            C00130  IMP
            C00131  dATP
            C00144  GMP
            C00147  Adenine
            C00169  Carbamoyl phosphate
            C00206  dADP
            C00209  Oxalate
            C00212  Adenosine
            C00224  Adenylyl sulfate
            C00242  Guanine
            C00262  Hypoxanthine
            C00286  dGTP
            C00288  HCO3-
            C00294  Inosine
            C00301  ADP-ribose
            C00330  Deoxyguanosine
            C00360  dAMP
            C00361  dGDP
            C00362  dGMP
            C00366  Urate
            C00385  Xanthine
            C00387  Guanosine
            C00499  Allantoate
            C00559  Deoxyadenosine
            C00575  3',5'-Cyclic AMP
            C00603  (S)-Ureidoglycolate
            C00620  alpha-D-Ribose 1-phosphate
            C00655  Xanthosine 5'-phosphate
            C00700  XTP
            C00802  Oxalureate
            C00942  3',5'-Cyclic GMP
            C01228  Guanosine 3',5'-bis(diphosphate)
            C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
            C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
            C01344  dIDP
            C01345  dITP
            C01367  3'-AMP
            C01444  Oxamate
            C01762  Xanthosine
            C02091  (S)-Ureidoglycine
            C02348  (R)(-)-Allantoin
            C02350  (S)-Allantoin
            C02353  2',3'-Cyclic AMP
            C02718  N-Formiminoglycine
            C03090  5-Phosphoribosylamine
            C03373  Aminoimidazole ribotide
            C03483  Adenosine tetraphosphate
            C03614  Inosine 5'-tetraphosphate
            C03794  N6-(1,2-Dicarboxyethyl)-AMP
            C03838  5'-Phosphoribosylglycinamide
            C04051  5-Amino-4-imidazolecarboxyamide
            C04376  5'-Phosphoribosyl-N-formylglycinamide
            C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
            C04494  Guanosine 3'-diphosphate 5'-triphosphate
            C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
            C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
            C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
            C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
            C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
            C05239  5-Aminoimidazole
            C05512  Deoxyinosine
            C05513  Urate-3-ribonucleoside
            C05515  5-Ureido-4-imidazole carboxylate
            C05516  5-Amino-4-imidazole carboxylate
            C05993  Acetyl adenylate
            C06193  Guanosine 3'-phosphate
            C06194  2',3'-Cyclic GMP
            C06195  Imidazolone
            C06196  2'-Deoxyinosine 5'-phosphate
            C06197  P1,P3-Bis(5'-adenosyl) triphosphate
            C06433  5'-Benzoylphosphoadenosine
            C06435  5'-Butyrylphosphoinosine
            C11821  5-Hydroxyisourate
            C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
            C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
            C22395  N6-Succino-2-amino-2'-deoxyadenylate
            C22441  dZMP
            C22442  dZDP
            C22443  dZTP
            C22499  8-Hydroxyadenine
            C22500  2,8-Dihydroxyadenine
REFERENCE   PMID:10601204
  AUTHORS   Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  TITLE     Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  JOURNAL   J Bacteriol 181:7479-84 (1999)
            DOI:10.1128/JB.181.24.7479-7484.1999
REFERENCE   PMID:10986234
  AUTHORS   Xi H, Schneider BL, Reitzer L.
  TITLE     Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  JOURNAL   J Bacteriol 182:5332-41 (2000)
            DOI:10.1128/JB.182.19.5332-5341.2000
REL_PATHWAY sly00030  Pentose phosphate pathway
            sly00220  Arginine biosynthesis
            sly00250  Alanine, aspartate and glutamate metabolism
            sly00260  Glycine, serine and threonine metabolism
            sly00340  Histidine metabolism
            sly00630  Glyoxylate and dicarboxylate metabolism
            sly00730  Thiamine metabolism
            sly00740  Riboflavin metabolism
            sly00790  Folate biosynthesis
KO_PATHWAY  ko00230
///
