ENTRY       osa00190                    Pathway
NAME        Oxidative phosphorylation - Oryza sativa japonica (Japanese rice) (RefSeq)
CLASS       Metabolism; Energy metabolism
PATHWAY_MAP osa00190  Oxidative phosphorylation
MODULE      osa_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:osa00190]
            osa_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:osa00190]
            osa_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:osa00190]
            osa_M00148  Succinate dehydrogenase (ubiquinone) [PATH:osa00190]
            osa_M00151  Cytochrome bc1 complex respiratory unit [PATH:osa00190]
            osa_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:osa00190]
ORGANISM    Oryza sativa japonica (Japanese rice) (RefSeq) [GN:osa]
GENE        3131395  ndhA; NADH dehydrogenase subunit 1 [KO:K05572] [EC:7.1.1.2]
            107279209  NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic-like isoform X1 [KO:K05572] [EC:7.1.1.2]
            3131396  ndhB; NADH dehydrogenase subunit 2 [KO:K05573] [EC:7.1.1.2]
            3131397  ndhB; NADH dehydrogenase subunit 2 [KO:K05573] [EC:7.1.1.2]
            3131460  ndhC; NADH dehydrogenase subunit 3 [KO:K05574] [EC:7.1.1.2]
            3131398  ndhD; NADH dehydrogenase subunit 4 [KO:K05575] [EC:7.1.1.2]
            3131399  ndhE; NADH dehydrogenase subunit 4L [KO:K05576] [EC:7.1.1.2]
            3131400  ndhF; NADH dehydrogenase subunit 5 [KO:K05577] [EC:7.1.1.2]
            3131401  ndhG; NADH dehydrogenase subunit 6 [KO:K05578] [EC:7.1.1.2]
            3131489  ndhH; NADH dehydrogenase subunit 7 [KO:K05579] [EC:7.1.1.2]
            3131488  ndhI; NADH dehydrogenase subunit I [KO:K05580] [EC:7.1.1.2]
            3131458  ndhJ; NADH dehydrogenase subunit J [KO:K05581] [EC:7.1.1.2]
            3131459  ndhK; NADH dehydrogenase subunit K [KO:K05582] [EC:7.1.1.2]
            6450162  nad1; NADH dehydrogenase subunit 1 [KO:K03878] [EC:7.1.1.2]
            107276733  NADH-ubiquinone oxidoreductase chain 1-like [KO:K03878] [EC:7.1.1.2]
            6450140  nad2; NADH dehydrogenase subunit 2 [KO:K03879] [EC:7.1.1.2]
            6450168  nad3; NADH dehydrogenase subunit 3 [KO:K03880] [EC:7.1.1.2]
            107279550  NADH-ubiquinone oxidoreductase chain 3 [KO:K03880] [EC:7.1.1.2]
            107279592  NADH-ubiquinone oxidoreductase chain 3 [KO:K03880] [EC:7.1.1.2]
            6450121  nad4; NADH dehydrogenase subunit 4 [KO:K03881] [EC:7.1.1.2]
            6450148  nad4L; NADH dehydrogenase subunit 4L [KO:K03882] [EC:7.1.1.2]
            6450143  nad5; NADH dehydrogenase subunit 5 [KO:K03883] [EC:7.1.1.2]
            6450132  nad6; NADH dehydrogenase subunit 6 [KO:K03884] [EC:7.1.1.2]
            4333901  NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [KO:K03934] [EC:7.1.1.2]
            6450198  nad7; NADH dehydrogenase subunit 7 [KO:K03935] [EC:7.1.1.2]
            6450154  nad9; NADH dehydrogenase subunit 9 [KO:K03936] [EC:7.1.1.2]
            4343746  NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [KO:K03937]
            4346289  NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [KO:K03938]
            4344724  NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [KO:K03939]
            4339427  NADH-quinone oxidoreductase subunit B [KO:K03940] [EC:7.1.1.2]
            107276869  NADH-quinone oxidoreductase subunit B-like [KO:K03940] [EC:7.1.1.2]
            4334276  NADH-ubiquinone oxidoreductase subunit 8 [KO:K03941] [EC:7.1.1.2]
            4344095  NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [KO:K03942] [EC:7.1.1.2]
            4339271  NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [KO:K03943] [EC:7.1.1.2]
            4339127  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [KO:K03945]
            4335450  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [KO:K03946]
            4332639  probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [KO:K03949]
            4344058  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [KO:K03950]
            4332532  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [KO:K03952]
            4331143  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [KO:K03953]
            4342743  acyl carrier protein 1, mitochondrial [KO:K03955]
            4332854  acyl carrier protein 2, mitochondrial [KO:K03955]
            4338621  acyl carrier protein 2, mitochondrial [KO:K03955]
            4349513  probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [KO:K11352]
            4331914  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [KO:K11353]
            4331499  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [KO:K03963]
            4342058  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [KO:K03965]
            4349491  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [KO:K03966]
            9266372  external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial isoform X1 [KO:K03885] [EC:1.6.5.9]
            4341876  external alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial [KO:K03885] [EC:1.6.5.9]
            4343616  internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [KO:K03885] [EC:1.6.5.9]
            4327426  internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial isoform X1 [KO:K03885] [EC:1.6.5.9]
            4338442  external alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [KO:K03885] [EC:1.6.5.9]
            4342350  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
            4344541  succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial isoform X2 [KO:K00235] [EC:1.3.5.1]
            4346890  succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [KO:K00235] [EC:1.3.5.1]
            4328125  succinate dehydrogenase subunit 3-1, mitochondrial [KO:K00236]
            4343404  succinate dehydrogenase subunit 3-2, mitochondrial [KO:K00236]
            4338591  succinate dehydrogenase subunit 4, mitochondrial-like [KO:K25801]
            4326521  succinate dehydrogenase subunit 4, mitochondrial [KO:K25801]
            4335710  cytochrome b-c1 complex subunit Rieske, mitochondrial [KO:K00411] [EC:7.1.1.8]
            4329497  cytochrome b-c1 complex subunit Rieske, mitochondrial [KO:K00411] [EC:7.1.1.8]
            6450178  cob; apocytochrome b [KO:K00412]
            4338350  cytochrome c1-2, heme protein, mitochondrial [KO:K00413]
            4326795  cytochrome c1-2, heme protein, mitochondrial [KO:K00413]
            4349859  cytochrome b-c1 complex subunit 6 [KO:K00416]
            4334506  cytochrome b-c1 complex subunit 7 [KO:K00417]
            4345059  cytochrome b-c1 complex subunit 7-1 [KO:K00417]
            107275250  cytochrome b-c1 complex subunit 7-like [KO:K00417]
            4338723  cytochrome b-c1 complex subunit 9 [KO:K00419]
            4323939  protoheme IX farnesyltransferase, mitochondrial [KO:K02257] [EC:2.5.1.141]
            6450138  cox3; cytochrome c oxidase subunit 3 [KO:K02262]
            6450122  cox1; cytochrome c oxidase subunit1 [KO:K02256] [EC:7.1.1.9]
            6450161  cox2; cytochrome c oxidase subunit 2 [KO:K02261]
            4325317  putative cytochrome c oxidase subunit 5b-like [KO:K02265]
            4340088  putative cytochrome c oxidase subunit 5b-like [KO:K02265]
            4334266  cytochrome c oxidase subunit 6a, mitochondrial [KO:K02266]
            4330974  cytochrome c oxidase subunit 6b-2 [KO:K02267]
            4336292  cytochrome c oxidase subunit 6b-2 [KO:K02267]
            4333018  cytochrome c oxidase subunit 6b-1 [KO:K02267]
            4343941  cytochrome c oxidase subunit 6b-1 [KO:K02267]
            4333922  cytochrome c oxidase assembly protein COX11, mitochondrial [KO:K02258]
            4345926  cytochrome c oxidase assembly protein COX15 [KO:K02259] [EC:1.17.99.9]
            4330997  cytochrome c oxidase copper chaperone 1 [KO:K02260]
            4347084  cytochrome c oxidase copper chaperone 1 [KO:K02260]
            4324880  cytochrome c-like [KO:K08738]
            4338825  cytochrome c [KO:K08738]
            107278135  cytochrome c-like [KO:K08738]
            3131390  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
            107279124  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
            3131462  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
            4343366  ATP synthase subunit gamma, chloroplastic [KO:K02115]
            9270776  ATP synthase delta chain, chloroplastic [KO:K02113]
            3131461  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
            3131393  atpI; ATP synthase CF0 A subunit [KO:K02108]
            3131391  atpF; ATP synthase CF0 B subunit [KO:K02109]
            4332431  ATP synthase subunit b', chloroplastic [KO:K02109]
            6450152  orfB; ORFB protein [KO:K02109]
            3131392  atpH; ATP synthase CF0 C subunit [KO:K02110]
            6450183  atp1; ATP synthase F0 subunit 1 [KO:K02132]
            4339546  ATP synthase subunit beta, mitochondrial [KO:K02133] [EC:7.1.2.2]
            4324151  ATP synthase subunit beta, mitochondrial-like [KO:K02133] [EC:7.1.2.2]
            4348305  ATP synthase subunit gamma, mitochondrial [KO:K02136]
            4343288  ATP synthase subunit delta', mitochondrial [KO:K02134]
            4345078  ATP synthase subunit epsilon, mitochondrial [KO:K02135]
            4341660  ATP synthase subunit O, mitochondrial [KO:K02137]
            6450195  atp6; ATP synthase F0 subunit 6 [KO:K02126]
            6450130  atp9; ATP synthase F0 subunit 9 [KO:K02128]
            107279585  ATP synthase subunit 9, mitochondrial [KO:K02128]
            4345839  ATP synthase subunit d, mitochondrial [KO:K02138]
            4339428  uncharacterized protein LOC4339428 isoform X1 [KO:K02140]
            4324593  uncharacterized protein LOC4324593 [KO:K02140]
            107276756  uncharacterized protein LOC107276756 isoform X1 [KO:K02140]
            4341751  V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
            4328470  V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
            4341339  V-type proton ATPase subunit B 1 isoform X1 [KO:K02147]
            4327833  V-type proton ATPase subunit B 2 isoform X1 [KO:K02147]
            4339800  V-type proton ATPase subunit C [KO:K02148]
            4337176  V-type proton ATPase subunit D [KO:K02149]
            4339122  V-type proton ATPase subunit E2 [KO:K02150]
            4326699  V-type proton ATPase subunit E [KO:K02150]
            4327166  V-type proton ATPase subunit E [KO:K02150]
            4331207  V-type proton ATPase subunit F [KO:K02151]
            4335014  V-type proton ATPase subunit F [KO:K02151]
            4336883  V-type proton ATPase subunit G1 [KO:K02152]
            9272111  probable V-type proton ATPase subunit H [KO:K02144]
            4327412  V-type proton ATPase subunit a1 [KO:K02154]
            4332270  V-type proton ATPase subunit a3 [KO:K02154]
            4348218  V-type proton ATPase subunit a3 [KO:K02154]
            4337563  V-type proton ATPase 16 kDa proteolipid subunit [KO:K02155]
            4349890  V-type proton ATPase 16 kDa proteolipid subunit [KO:K02155]
            4324550  V-type proton ATPase 16 kDa proteolipid subunit-like [KO:K02155]
            4329623  V-type proton ATPase 16 kDa proteolipid subunit [KO:K02155]
            4351612  V-type proton ATPase 16 kDa proteolipid subunit-like [KO:K02155]
            4327731  V-type proton ATPase subunit c''2 [KO:K03661]
            4327660  probable V-type proton ATPase subunit d [KO:K02146]
            4337284  V-type proton ATPase subunit e1 [KO:K02153]
            4337257  plasma membrane ATPase [KO:K01535] [EC:7.1.2.1]
            4352910  plasma membrane ATPase 1 [KO:K01535] [EC:7.1.2.1]
            4342621  plasma membrane ATPase 1 [KO:K01535] [EC:7.1.2.1]
            4331281  plasma membrane ATPase 1 isoform X1 [KO:K01535] [EC:7.1.2.1]
            4338405  ATPase 2, plasma membrane-type isoform X1 [KO:K01535] [EC:7.1.2.1]
            4331853  ATPase 10, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
            4333770  plasma membrane ATPase 1 isoform X1 [KO:K01535] [EC:7.1.2.1]
            4331015  ATPase 8, plasma membrane-type isoform X1 [KO:K01535] [EC:7.1.2.1]
            4340312  ATPase 6, plasma membrane-type isoform X1 [KO:K01535] [EC:7.1.2.1]
            4345039  plasma membrane ATPase-like isoform X1 [KO:K01535] [EC:7.1.2.1]
            107276159  plasma membrane ATPase 2-like [KO:K01535] [EC:7.1.2.1]
            4350530  ATPase 3, plasma membrane-type [KO:K01535] [EC:7.1.2.1]
            4338911  soluble inorganic pyrophosphatase [KO:K01507] [EC:3.6.1.1]
            4337608  soluble inorganic pyrophosphatase 4 [KO:K01507] [EC:3.6.1.1]
            4324298  soluble inorganic pyrophosphatase 4 [KO:K01507] [EC:3.6.1.1]
            4325072  soluble inorganic pyrophosphatase [KO:K01507] [EC:3.6.1.1]
            4330457  soluble inorganic pyrophosphatase [KO:K01507] [EC:3.6.1.1]
            4330852  soluble inorganic pyrophosphatase 6, chloroplastic [KO:K01507] [EC:3.6.1.1]
            4337476  soluble inorganic pyrophosphatase [KO:K01507] [EC:3.6.1.1]
            4348583  soluble inorganic pyrophosphatase 1 [KO:K01507] [EC:3.6.1.1]
COMPOUND    C00001  H2O
            C00002  ATP
            C00003  NAD+
            C00004  NADH
            C00007  Oxygen
            C00008  ADP
            C00009  Orthophosphate
            C00013  Diphosphate
            C00042  Succinate
            C00061  FMN
            C00080  H+
            C00122  Fumarate
            C00390  Ubiquinol
            C00399  Ubiquinone
            C00524  Cytochrome c
            C00536  Triphosphate
REFERENCE   PMID:16469879
  AUTHORS   Sazanov LA, Hinchliffe P.
  TITLE     Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus.
  JOURNAL   Science 311:1430-6 (2006)
            DOI:10.1126/science.1123809
REFERENCE   PMID:16584177
  AUTHORS   Hinchliffe P, Carroll J, Sazanov LA.
  TITLE     Identification of a novel subunit of respiratory complex I from Thermus thermophilus.
  JOURNAL   Biochemistry 45:4413-20 (2006)
            DOI:10.1021/bi0600998
KO_PATHWAY  ko00190
///
