ENTRY       mtr03022                    Pathway
NAME        Basal transcription factors - Medicago truncatula (barrel medic)
CLASS       Genetic Information Processing; Transcription
PATHWAY_MAP mtr03022  Basal transcription factors
DBLINKS     GO: 0005668 0005669 0005672 0005673 0005674 0005675
ORGANISM    Medicago truncatula (barrel medic) [GN:mtr]
GENE        11416101  transcription initiation factor IIA large subunit [KO:K03122]
            11428884  transcription initiation factor IIA subunit 2 [KO:K03123]
            11419402  transcription initiation factor IIA subunit 2 [KO:K03123]
            25488844  transcription initiation factor IIB-like [KO:K03124]
            11411099  plant-specific TFIIB-related protein 1 [KO:K03124]
            25488804  transcription initiation factor IIB-2 [KO:K03124]
            25488839  transcription initiation factor IIB-2 [KO:K03124]
            25483447  transcription initiation factor IIB [KO:K03124]
            11411517  transcription initiation factor IIB-2 [KO:K03124]
            25489234  TATA-box-binding protein [KO:K03120]
            25491712  TATA-box-binding protein [KO:K03120]
            25498820  TATA-box-binding protein [KO:K03120]
            25489244  TATA-box-binding protein isoform X1 [KO:K03120]
            11409951  transcription initiation factor TFIID subunit 1 isoform X2 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
            25481544  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2 [KO:K03128]
            25497809  transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
            11433231  transcription initiation factor TFIID subunit 7 [KO:K03132]
            11429047  uncharacterized protein LOC11429047 [KO:K14649]
            25497546  transcription initiation factor TFIID subunit 8 [KO:K14649]
            25485118  transcription initiation factor TFIID subunit 8 [KO:K14649]
            11432171  transcription initiation factor TFIID subunit 10 [KO:K03134]
            11425826  transcription initiation factor TFIID subunit 5 [KO:K03130]
            25489943  transcription initiation factor TFIID subunit 4b isoform X1 [KO:K03129]
            25483846  transcription initiation factor TFIID subunit 12 [KO:K03126]
            11443540  transcription initiation factor TFIID subunit 6 [KO:K03131]
            11432982  transcription initiation factor TFIID subunit 6 isoform X1 [KO:K03131]
            11421562  transcription initiation factor TFIID subunit 9 [KO:K03133]
            25494130  transcription initiation factor TFIID subunit 9 [KO:K03133]
            25483108  transcription initiation factor TFIID subunit 11 [KO:K03135]
            11427653  transcription initiation factor TFIID subunit 13 [KO:K03127]
            11408174  general transcription factor IIE subunit 1 [KO:K03136]
            120580122  transcription initiation factor IIE subunit alpha-like [KO:K03136]
            11443092  transcription initiation factor IIE subunit beta [KO:K03137]
            25502025  LOW QUALITY PROTEIN: general transcription factor IIE subunit 2 [KO:K03137]
            11406415  transcription initiation factor IIF subunit alpha [KO:K03138]
            11405916  transcription initiation factor IIF subunit alpha-like [KO:K03138]
            25495919  general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
            25490245  transcription initiation factor IIF subunit beta [KO:K03139] [EC:5.6.2.-]
            25496637  general transcription and DNA repair factor IIH subunit TFB1-1 [KO:K03141]
            11406928  general transcription and DNA repair factor IIH subunit TFB1-1 [KO:K03141]
            11417626  general transcription factor IIH subunit 2 [KO:K03142]
            11419054  general transcription and DNA repair factor IIH subunit TFB4 isoform X1 [KO:K03143]
            11406173  general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [KO:K03144]
            25493180  general transcription and DNA repair factor IIH subunit TFB2 [KO:K03144]
            25502076  general transcription and DNA repair factor IIH helicase subunit XPB1 [KO:K10843] [EC:5.6.2.4]
            25487506  general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
            11411289  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
            11406059  general transcription and DNA repair factor IIH subunit TFB5 [KO:K10845]
            25496775  cyclin-dependent kinase D-3 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
            25489030  cyclin-dependent kinase D-3 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
            11434892  CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
            11415666  cyclin-H1-1 [KO:K06634]
REFERENCE   PMID:16858867
  AUTHORS   Thomas MC, Chiang CM
  TITLE     The general transcription machinery and general cofactors.
  JOURNAL   Crit Rev Biochem Mol Biol 41:105-78 (2006)
            DOI:10.1080/10409230600648736
REFERENCE   PMID:12516863
  AUTHORS   Martinez E
  TITLE     Multi-protein complexes in eukaryotic gene transcription.
  JOURNAL   Plant Mol Biol 50:925-47 (2002)
            DOI:10.1023/A:1021258713850
REFERENCE   PMID:19308322
  AUTHORS   Cler E, Papai G, Schultz P, Davidson I
  TITLE     Recent advances in understanding the structure and function of general transcription factor TFIID.
  JOURNAL   Cell Mol Life Sci 66:2123-34 (2009)
            DOI:10.1007/s00018-009-0009-3
REFERENCE   PMID:10838567
  AUTHORS   Malik S, Roeder RG.
  TITLE     Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  JOURNAL   Trends Biochem Sci 25:277-283 (2000)
            DOI:10.1016/S0968-0004(00)01596-6
REL_PATHWAY mtr03020  RNA polymerase
            mtr03420  Nucleotide excision repair
KO_PATHWAY  ko03022
///
