ENTRY       mtr01100                    Pathway
NAME        Metabolic pathways - Medicago truncatula (barrel medic)
PATHWAY_MAP mtr01100  Metabolic pathways
MODULE      mtr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mtr01100]
            mtr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mtr01100]
            mtr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mtr01100]
            mtr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mtr01100]
            mtr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mtr01100]
            mtr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mtr01100]
            mtr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mtr01100]
            mtr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mtr01100]
            mtr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mtr01100]
            mtr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mtr01100]
            mtr_M00012  Glyoxylate cycle [PATH:mtr01100]
            mtr_M00015  Proline biosynthesis, glutamate => proline [PATH:mtr01100]
            mtr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mtr01100]
            mtr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mtr01100]
            mtr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:mtr01100]
            mtr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:mtr01100]
            mtr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:mtr01100]
            mtr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:mtr01100]
            mtr_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:mtr01100]
            mtr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:mtr01100]
            mtr_M00034  Methionine salvage pathway [PATH:mtr01100]
            mtr_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:mtr01100]
            mtr_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:mtr01100]
            mtr_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:mtr01100]
            mtr_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:mtr01100]
            mtr_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:mtr01100]
            mtr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mtr01100]
            mtr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mtr01100]
            mtr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mtr01100]
            mtr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mtr01100]
            mtr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mtr01100]
            mtr_M00055  N-glycan precursor biosynthesis [PATH:mtr01100]
            mtr_M00072  N-glycosylation by oligosaccharyltransferase [PATH:mtr01100]
            mtr_M00073  N-glycan precursor trimming [PATH:mtr01100]
            mtr_M00081  Pectin degradation [PATH:mtr01100]
            mtr_M00082  Fatty acid biosynthesis, initiation [PATH:mtr01100]
            mtr_M00083  Fatty acid biosynthesis, elongation [PATH:mtr01100]
            mtr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:mtr01100]
            mtr_M00087  beta-Oxidation [PATH:mtr01100]
            mtr_M00089  Triacylglycerol biosynthesis [PATH:mtr01100]
            mtr_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:mtr01100]
            mtr_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:mtr01100]
            mtr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:mtr01100]
            mtr_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:mtr01100]
            mtr_M00098  Acylglycerol degradation [PATH:mtr01100]
            mtr_M00100  Sphingosine degradation [PATH:mtr01100]
            mtr_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:mtr01100]
            mtr_M00113  Jasmonic acid biosynthesis [PATH:mtr01100]
            mtr_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:mtr01100]
            mtr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mtr01100]
            mtr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:mtr01100]
            mtr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:mtr01100]
            mtr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mtr01100]
            mtr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mtr01100]
            mtr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mtr01100]
            mtr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:mtr01100]
            mtr_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:mtr01100]
            mtr_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:mtr01100]
            mtr_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:mtr01100]
            mtr_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:mtr01100]
            mtr_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:mtr01100]
            mtr_M00166  Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P [PATH:mtr01100]
            mtr_M00167  Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P [PATH:mtr01100]
            mtr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:mtr01100]
            mtr_M00169  CAM (Crassulacean acid metabolism), light [PATH:mtr01100]
            mtr_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:mtr01100]
            mtr_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:mtr01100]
            mtr_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:mtr01100]
            mtr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mtr01100]
            mtr_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:mtr01100]
            mtr_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:mtr01100]
            mtr_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:mtr01100]
            mtr_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:mtr01100]
            mtr_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:mtr01100]
            mtr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mtr01100]
            mtr_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:mtr01100]
            mtr_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:mtr01100]
            mtr_M00532  Photorespiration [PATH:mtr01100]
            mtr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mtr01100]
            mtr_M00555  Betaine biosynthesis, choline => betaine [PATH:mtr01100]
            mtr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mtr01100]
            mtr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:mtr01100]
            mtr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mtr01100]
            mtr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mtr01100]
            mtr_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:mtr01100]
            mtr_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:mtr01100]
            mtr_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:mtr01100]
            mtr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:mtr01100]
            mtr_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:mtr01100]
            mtr_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mtr01100]
            mtr_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:mtr01100]
            mtr_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:mtr01100]
            mtr_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:mtr01100]
            mtr_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:mtr01100]
            mtr_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:mtr01100]
            mtr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mtr01100]
            mtr_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:mtr01100]
            mtr_M00941  Isoflavone biosynthesis, liquiritigenin/naringenin => daidzein/genistein [PATH:mtr01100]
            mtr_M00942  Pterocarpan biosynthesis, daidzein => medicarpin [PATH:mtr01100]
ORGANISM    Medicago truncatula (barrel medic) [GN:mtr]
REL_PATHWAY mtr00010  Glycolysis / Gluconeogenesis
            mtr00020  Citrate cycle (TCA cycle)
            mtr00030  Pentose phosphate pathway
            mtr00040  Pentose and glucuronate interconversions
            mtr00051  Fructose and mannose metabolism
            mtr00052  Galactose metabolism
            mtr00053  Ascorbate and aldarate metabolism
            mtr00061  Fatty acid biosynthesis
            mtr00062  Fatty acid elongation
            mtr00071  Fatty acid degradation
            mtr00073  Cutin, suberine and wax biosynthesis
            mtr00100  Steroid biosynthesis
            mtr00130  Ubiquinone and other terpenoid-quinone biosynthesis
            mtr00190  Oxidative phosphorylation
            mtr00195  Photosynthesis
            mtr00196  Photosynthesis - antenna proteins
            mtr00220  Arginine biosynthesis
            mtr00230  Purine metabolism
            mtr00232  Caffeine metabolism
            mtr00240  Pyrimidine metabolism
            mtr00250  Alanine, aspartate and glutamate metabolism
            mtr00260  Glycine, serine and threonine metabolism
            mtr00261  Monobactam biosynthesis
            mtr00270  Cysteine and methionine metabolism
            mtr00280  Valine, leucine and isoleucine degradation
            mtr00290  Valine, leucine and isoleucine biosynthesis
            mtr00300  Lysine biosynthesis
            mtr00310  Lysine degradation
            mtr00330  Arginine and proline metabolism
            mtr00340  Histidine metabolism
            mtr00350  Tyrosine metabolism
            mtr00360  Phenylalanine metabolism
            mtr00380  Tryptophan metabolism
            mtr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
            mtr00410  beta-Alanine metabolism
            mtr00430  Taurine and hypotaurine metabolism
            mtr00440  Phosphonate and phosphinate metabolism
            mtr00450  Selenocompound metabolism
            mtr00460  Cyanoamino acid metabolism
            mtr00470  D-Amino acid metabolism
            mtr00480  Glutathione metabolism
            mtr00500  Starch and sucrose metabolism
            mtr00510  N-Glycan biosynthesis
            mtr00511  Other glycan degradation
            mtr00513  Various types of N-glycan biosynthesis
            mtr00514  Other types of O-glycan biosynthesis
            mtr00520  Amino sugar and nucleotide sugar metabolism
            mtr00531  Glycosaminoglycan degradation
            mtr00543  Exopolysaccharide biosynthesis
            mtr00561  Glycerolipid metabolism
            mtr00562  Inositol phosphate metabolism
            mtr00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
            mtr00564  Glycerophospholipid metabolism
            mtr00565  Ether lipid metabolism
            mtr00590  Arachidonic acid metabolism
            mtr00591  Linoleic acid metabolism
            mtr00592  alpha-Linolenic acid metabolism
            mtr00600  Sphingolipid metabolism
            mtr00601  Glycosphingolipid biosynthesis - lacto and neolacto series
            mtr00603  Glycosphingolipid biosynthesis - globo and isoglobo series
            mtr00604  Glycosphingolipid biosynthesis - ganglio series
            mtr00620  Pyruvate metabolism
            mtr00630  Glyoxylate and dicarboxylate metabolism
            mtr00640  Propanoate metabolism
            mtr00650  Butanoate metabolism
            mtr00660  C5-Branched dibasic acid metabolism
            mtr00670  One carbon pool by folate
            mtr00710  Carbon fixation in photosynthetic organisms
            mtr00730  Thiamine metabolism
            mtr00740  Riboflavin metabolism
            mtr00750  Vitamin B6 metabolism
            mtr00760  Nicotinate and nicotinamide metabolism
            mtr00770  Pantothenate and CoA biosynthesis
            mtr00780  Biotin metabolism
            mtr00785  Lipoic acid metabolism
            mtr00790  Folate biosynthesis
            mtr00860  Porphyrin metabolism
            mtr00900  Terpenoid backbone biosynthesis
            mtr00903  Limonene and pinene degradation
            mtr00904  Diterpenoid biosynthesis
            mtr00905  Brassinosteroid biosynthesis
            mtr00906  Carotenoid biosynthesis
            mtr00908  Zeatin biosynthesis
            mtr00909  Sesquiterpenoid and triterpenoid biosynthesis
            mtr00910  Nitrogen metabolism
            mtr00920  Sulfur metabolism
            mtr00940  Phenylpropanoid biosynthesis
            mtr00941  Flavonoid biosynthesis
            mtr00943  Isoflavonoid biosynthesis
            mtr00944  Flavone and flavonol biosynthesis
            mtr00950  Isoquinoline alkaloid biosynthesis
            mtr00960  Tropane, piperidine and pyridine alkaloid biosynthesis
            mtr00965  Betalain biosynthesis
            mtr00966  Glucosinolate biosynthesis
            mtr00999  Biosynthesis of various plant secondary metabolites
            mtr01040  Biosynthesis of unsaturated fatty acids
KO_PATHWAY  ko01100
///
