ENTRY       mtr00970                    Pathway
NAME        Aminoacyl-tRNA biosynthesis - Medicago truncatula (barrel medic)
CLASS       Genetic Information Processing; Translation
PATHWAY_MAP mtr00970  Aminoacyl-tRNA biosynthesis
ORGANISM    Medicago truncatula (barrel medic) [GN:mtr]
GENE        26974315  trnF-GAA; tRNA-Phe [KO:K14231]
            25500188  glutamate--tRNA ligase, chloroplastic/mitochondrial [KO:K01885] [EC:6.1.1.17]
            11407510  glutamate--tRNA ligase, cytoplasmic [KO:K01885] [EC:6.1.1.17]
            11440476  glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
            11408229  glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
            11421004  glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
            11418586  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
            11419289  alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01872] [EC:6.1.1.7]
            11443642  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
            11441602  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
            11427296  aspartate--tRNA ligase 2, cytoplasmic [KO:K22503] [EC:6.1.1.12]
            11415753  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
            11444696  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
            11417726  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
            11443734  aspartate--tRNA ligase, chloroplastic/mitochondrial [KO:K01876] [EC:6.1.1.12]
            11424955  asparagine--tRNA ligase, cytoplasmic 2 [KO:K01893] [EC:6.1.1.22]
            11434753  asparagine--tRNA ligase, cytoplasmic 1 [KO:K01893] [EC:6.1.1.22]
            11412373  asparagine--tRNA ligase, cytoplasmic 1 [KO:K01893] [EC:6.1.1.22]
            11409968  asparagine--tRNA ligase, chloroplastic/mitochondrial [KO:K01893] [EC:6.1.1.22]
            25499807  glycine--tRNA ligase, mitochondrial 1 [KO:K01880] [EC:6.1.1.14]
            25488481  glycine--tRNA ligase, mitochondrial 1 [KO:K01880] [EC:6.1.1.14]
            25488482  glycine--tRNA ligase, mitochondrial 1 [KO:K01880] [EC:6.1.1.14]
            25500059  glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K14164] [EC:6.1.1.14]
            11437353  threonine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K01868] [EC:6.1.1.3]
            11405640  threonine--tRNA ligase, mitochondrial 1 [KO:K01868] [EC:6.1.1.3]
            11434218  serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01875] [EC:6.1.1.11]
            11426408  serine--tRNA ligase isoform X2 [KO:K01875] [EC:6.1.1.11]
            11432999  cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [KO:K01883] [EC:6.1.1.16]
            11431016  cysteine--tRNA ligase 2, cytoplasmic [KO:K01883] [EC:6.1.1.16]
            25485698  methionine--tRNA ligase, chloroplastic/mitochondrial [KO:K01874] [EC:6.1.1.10]
            11441226  probable methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
            11422324  probable methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
            25495075  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
            25495825  valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [KO:K01873] [EC:6.1.1.9]
            11414665  valine--tRNA ligase, mitochondrial 1 isoform X1 [KO:K01873] [EC:6.1.1.9]
            11437887  leucine--tRNA ligase, chloroplastic/mitochondrial [KO:K01869] [EC:6.1.1.4]
            25489111  leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
            11422357  leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
            11439215  isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
            25488131  isoleucine--tRNA ligase, chloroplastic/mitochondrial [KO:K01870] [EC:6.1.1.5]
            11443601  lysine--tRNA ligase, cytoplasmic [KO:K04567] [EC:6.1.1.6]
            25500097  lysine--tRNA ligase, chloroplastic/mitochondrial [KO:K04567] [EC:6.1.1.6]
            11423898  LOW QUALITY PROTEIN: lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
            11415626  LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
            25496992  arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
            25490148  arginine--tRNA ligase, chloroplastic/mitochondrial [KO:K01887] [EC:6.1.1.19]
            25485317  arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
            11428666  proline--tRNA ligase, cytoplasmic [KO:K01881] [EC:6.1.1.15]
            11407954  proline--tRNA ligase, cytoplasmic [KO:K01881] [EC:6.1.1.15]
            11420887  proline--tRNA ligase, chloroplastic/mitochondrial [KO:K01881] [EC:6.1.1.15]
            11427409  proline--tRNA ligase, cytoplasmic [KO:K01881] [EC:6.1.1.15]
            25499324  histidine--tRNA ligase, chloroplastic/mitochondrial [KO:K01892] [EC:6.1.1.21]
            25483747  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
            11417135  phenylalanine--tRNA ligase alpha subunit, cytoplasmic [KO:K01889] [EC:6.1.1.20]
            11438534  phenylalanine--tRNA ligase, chloroplastic/mitochondrial [KO:K01889] [EC:6.1.1.20]
            120577607  phenylalanine--tRNA ligase beta subunit, cytoplasmic-like [KO:K01890] [EC:6.1.1.20]
            11435355  phenylalanine--tRNA ligase beta subunit, cytoplasmic [KO:K01890] [EC:6.1.1.20]
            11439682  phenylalanine--tRNA ligase beta subunit, cytoplasmic [KO:K01890] [EC:6.1.1.20]
            25494107  tyrosine--tRNA ligase, chloroplastic/mitochondrial [KO:K01866] [EC:6.1.1.1]
            25491022  tyrosine--tRNA ligase, chloroplastic/mitochondrial [KO:K01866] [EC:6.1.1.1]
            25483460  tyrosine--tRNA ligase 1, cytoplasmic [KO:K01866] [EC:6.1.1.1]
            25500099  tryptophan--tRNA ligase, cytoplasmic isoform X1 [KO:K01867] [EC:6.1.1.2]
            25490146  tryptophan--tRNA ligase, chloroplastic/mitochondrial [KO:K01867] [EC:6.1.1.2]
COMPOUND    C00025  L-Glutamate
            C00037  Glycine
            C00041  L-Alanine
            C00047  L-Lysine
            C00049  L-Aspartate
            C00062  L-Arginine
            C00064  L-Glutamine
            C00065  L-Serine
            C00073  L-Methionine
            C00078  L-Tryptophan
            C00079  L-Phenylalanine
            C00082  L-Tyrosine
            C00097  L-Cysteine
            C00101  Tetrahydrofolate
            C00123  L-Leucine
            C00135  L-Histidine
            C00148  L-Proline
            C00152  L-Asparagine
            C00183  L-Valine
            C00188  L-Threonine
            C00234  10-Formyltetrahydrofolate
            C00407  L-Isoleucine
            C00886  L-Alanyl-tRNA
            C01005  O-Phospho-L-serine
            C01931  L-Lysyl-tRNA
            C02047  L-Leucyl-tRNA
            C02163  L-Arginyl-tRNA(Arg)
            C02282  Glutaminyl-tRNA
            C02412  Glycyl-tRNA(Gly)
            C02430  L-Methionyl-tRNA
            C02553  L-Seryl-tRNA(Ser)
            C02554  L-Valyl-tRNA(Val)
            C02702  L-Prolyl-tRNA(Pro)
            C02839  L-Tyrosyl-tRNA(Tyr)
            C02984  L-Aspartyl-tRNA(Asp)
            C02987  L-Glutamyl-tRNA(Glu)
            C02988  L-Histidyl-tRNA(His)
            C02992  L-Threonyl-tRNA(Thr)
            C03125  L-Cysteinyl-tRNA(Cys)
            C03127  L-Isoleucyl-tRNA(Ile)
            C03294  N-Formylmethionyl-tRNA
            C03402  L-Asparaginyl-tRNA(Asn)
            C03511  L-Phenylalanyl-tRNA(Phe)
            C03512  L-Tryptophanyl-tRNA(Trp)
            C06112  L-Glutamyl-tRNA(Gln)
            C06113  L-Aspartyl-tRNA(Asn)
            C06481  L-Seryl-tRNA(Sec)
            C06482  L-Selenocysteinyl-tRNA(Sec)
            C16138  L-Pyrrolysine
            C16638  O-Phosphoseryl-tRNA(Sec)
            C17022  O-Phosphoseryl-tRNA(Cys)
            C17027  L-Pyrrolysyl-tRNA(Pyl)
REFERENCE   PMID:18252769
  AUTHORS   Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  TITLE     From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  JOURNAL   Nucleic Acids Res 36:1813-25 (2008)
            DOI:10.1093/nar/gkn015
REFERENCE   PMID:15314242
  AUTHORS   Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  TITLE     An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  JOURNAL   Proc Natl Acad Sci U S A 101:12450-4 (2004)
            DOI:10.1073/pnas.0405362101
REL_PATHWAY mtr00250  Alanine, aspartate and glutamate metabolism
            mtr00260  Glycine, serine and threonine metabolism
            mtr00270  Cysteine and methionine metabolism
            mtr00290  Valine, leucine and isoleucine biosynthesis
            mtr00300  Lysine biosynthesis
            mtr00330  Arginine and proline metabolism
            mtr00340  Histidine metabolism
            mtr00380  Tryptophan metabolism
            mtr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO_PATHWAY  ko00970
///
