ENTRY       mtr00240                    Pathway
NAME        Pyrimidine metabolism - Medicago truncatula (barrel medic)
CLASS       Metabolism; Nucleotide metabolism
PATHWAY_MAP mtr00240  Pyrimidine metabolism
MODULE      mtr_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:mtr00240]
            mtr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mtr00240]
            mtr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mtr00240]
            mtr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mtr00240]
DBLINKS     GO: 0006220 0006213
ORGANISM    Medicago truncatula (barrel medic) [GN:mtr]
GENE        11418051  carbamoyl-phosphate synthase large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
            11424976  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
            11407155  carbamoyl-phosphate synthase small chain, chloroplastic [KO:K01956] [EC:6.3.5.5]
            11437903  aspartate carbamoyltransferase 2, chloroplastic isoform X3 [KO:K00609] [EC:2.1.3.2]
            11426800  aspartate carbamoyltransferase 1, chloroplastic [KO:K00609] [EC:2.1.3.2]
            11444984  dihydroorotase, mitochondrial [KO:K01465] [EC:3.5.2.3]
            11421923  dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
            11441435  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
            11434799  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
            11414291  uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
            11425503  UMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
            25491834  UMP-CMP kinase isoform X1 [KO:K13800] [EC:2.7.4.14]
            11405787  UMP-CMP kinase [KO:K13800] [EC:2.7.4.14]
            11437214  uridylate kinase [KO:K09903] [EC:2.7.4.22]
            25500090  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
            11407961  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
            11413244  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
            112416222  nucleoside-triphosphatase-like [KO:K14641] [EC:3.6.1.5]
            25495872  apyrase 2 [KO:K14641] [EC:3.6.1.5]
            11443103  apyrase 2 [KO:K14641] [EC:3.6.1.5]
            11441027  nucleoside-triphosphatase [KO:K14641] [EC:3.6.1.5]
            11441028  nucleoside-triphosphatase isoform X1 [KO:K14641] [EC:3.6.1.5]
            11436281  nucleoside-triphosphatase [KO:K14641] [EC:3.6.1.5]
            11436512  venom phosphodiesterase 2 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
            11439434  ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
            11423868  CTP synthase [KO:K01937] [EC:6.3.4.2]
            11444287  CTP synthase [KO:K01937] [EC:6.3.4.2]
            25502430  CTP synthase [KO:K01937] [EC:6.3.4.2]
            11419996  CTP synthase [KO:K01937] [EC:6.3.4.2]
            11444865  uridine kinase-like protein 4 [KO:K00876] [EC:2.7.1.48]
            11407137  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
            25501494  inorganic pyrophosphatase TTM2 [KO:K00876] [EC:2.7.1.48]
            25497859  uridine kinase-like protein 1, chloroplastic [KO:K00876] [EC:2.7.1.48]
            11446601  inorganic pyrophosphatase TTM1 isoform X1 [KO:K00876] [EC:2.7.1.48]
            25492797  inorganic pyrophosphatase TTM2 isoform X1 [KO:K00876] [EC:2.7.1.48]
            11433705  uridine kinase-like protein 4 [KO:K00876] [EC:2.7.1.48]
            11416863  uridine kinase-like protein 5 [KO:K00876] [EC:2.7.1.48]
            11417330  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11425771  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11438663  uncharacterized protein LOC11438663 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11439598  5'-nucleotidase SurE isoform X2 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11430380  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
            11428555  probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
            11434767  uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
            25491555  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
            11424519  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
            11415179  7-methylguanosine phosphate-specific 5'-nucleotidase [KO:K24242] [EC:3.1.3.91]
            11428999  cytidine deaminase 1 [KO:K01489] [EC:3.5.4.5]
            11430168  cytidine deaminase 1 [KO:K01489] [EC:3.5.4.5]
            11438405  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
            25488510  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
            25502786  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25480771  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25497818  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25494012  ribonucleoside-diphosphate reductase small chain A [KO:K10808] [EC:1.17.4.1]
            25483253  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            11431912  dCTP pyrophosphatase 1 [KO:K16904] [EC:3.6.1.12]
            25480606  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            25494275  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            25494276  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            11409501  deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
            25480774  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
            11405368  thymidylate kinase-like [KO:K00943] [EC:2.7.4.9]
            25489181  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
            11436557  thymidine kinase a [KO:K00857] [EC:2.7.1.21]
            112418988  thymidine kinase a-like [KO:K00857] [EC:2.7.1.21]
            11415341  bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
            25495385  bifunctional dihydrofolate reductase-thymidylate synthase isoform X1 [KO:K13998] [EC:1.5.1.3 2.1.1.45]
            11440565  bifunctional dihydrofolate reductase-thymidylate synthase [KO:K13998] [EC:1.5.1.3 2.1.1.45]
            11414639  dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic [KO:K00207] [EC:1.3.1.2]
            11421464  dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
            11434280  dihydropyrimidinase isoform X1 [KO:K01464] [EC:3.5.2.2]
            11411828  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
            11406828  beta-ureidopropionase [KO:K01431] [EC:3.5.1.6]
COMPOUND    C00015  UDP
            C00039  DNA
            C00046  RNA
            C00055  CMP
            C00063  CTP
            C00064  L-Glutamine
            C00075  UTP
            C00086  Urea
            C00099  beta-Alanine
            C00105  UMP
            C00106  Uracil
            C00112  CDP
            C00119  5-Phospho-alpha-D-ribose 1-diphosphate
            C00169  Carbamoyl phosphate
            C00178  Thymine
            C00214  Thymidine
            C00222  3-Oxopropanoate
            C00239  dCMP
            C00295  Orotate
            C00299  Uridine
            C00337  (S)-Dihydroorotate
            C00363  dTDP
            C00364  dTMP
            C00365  dUMP
            C00380  Cytosine
            C00383  Malonate
            C00429  5,6-Dihydrouracil
            C00438  N-Carbamoyl-L-aspartate
            C00458  dCTP
            C00459  dTTP
            C00460  dUTP
            C00475  Cytidine
            C00526  Deoxyuridine
            C00672  2-Deoxy-D-ribose 1-phosphate
            C00705  dCDP
            C00813  Barbiturate
            C00881  Deoxycytidine
            C01013  3-Hydroxypropanoate
            C01103  Orotidine 5'-phosphate
            C01168  Pseudouridine 5'-phosphate
            C01205  (R)-3-Amino-2-methylpropanoate
            C01346  dUDP
            C01368  3'-UMP
            C01563  Carbamate
            C02067  Pseudouridine
            C02170  Methylmalonate
            C02354  2',3'-Cyclic CMP
            C02355  2',3'-Cyclic UMP
            C02376  5-Methylcytosine
            C02642  3-Ureidopropionate
            C03997  5-Hydroxymethyldeoxycytidylate
            C05281  5-Methylbarbiturate
            C05822  3'-CMP
            C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
            C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
            C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
            C15607  3-Oxo-3-ureidopropanoate
            C20231  (Z)-3-Ureidoacrylate peracid
            C20249  (Z)-3-Peroxyaminoacrylate
            C20253  Aminoacrylate
            C20254  Ureidoacrylate
            C20846  3-Oxo-3-ureidoisobutyrate
            C21028  (R)-5,6-Dihydrothymine
            C21029  (R)-3-Ureidoisobutyrate
REL_PATHWAY mtr00030  Pentose phosphate pathway
            mtr00220  Arginine biosynthesis
            mtr00250  Alanine, aspartate and glutamate metabolism
            mtr00280  Valine, leucine and isoleucine degradation
            mtr00410  beta-Alanine metabolism
KO_PATHWAY  ko00240
///
