ENTRY       mtr00230                    Pathway
NAME        Purine metabolism - Medicago truncatula (barrel medic)
CLASS       Metabolism; Nucleotide metabolism
PATHWAY_MAP mtr00230  Purine metabolism
MODULE      mtr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mtr00230]
            mtr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mtr00230]
            mtr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mtr00230]
            mtr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mtr00230]
            mtr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mtr00230]
DBLINKS     GO: 0006163 0042278
ORGANISM    Medicago truncatula (barrel medic) [GN:mtr]
GENE        11416144  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
            25493698  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [KO:K01517] [EC:3.6.1.13 3.6.1.16 3.6.1.53]
            11437937  nudix hydrolase 23, chloroplastic [KO:K18453] [EC:3.6.1.13 3.6.1.18]
            11426348  nudix hydrolase 14, chloroplastic isoform X1 [KO:K18447] [EC:3.6.1.21]
            11413693  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
            11414670  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
            25500166  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
            11415474  ribose-phosphate pyrophosphokinase 1 [KO:K00948] [EC:2.7.6.1]
            11438087  amidophosphoribosyltransferase, chloroplastic [KO:K00764] [EC:2.4.2.14]
            11407383  LOW QUALITY PROTEIN: phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
            11431305  phosphoribosylglycinamide formyltransferase, chloroplastic [KO:K00601] [EC:2.1.2.2]
            25502246  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
            25495271  probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [KO:K01952] [EC:6.3.5.3]
            11440983  phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [KO:K01933] [EC:6.3.3.1]
            11405596  phosphoribosylaminoimidazole carboxylase, chloroplastic [KO:K11808] [EC:4.1.1.21]
            11426009  phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic [KO:K01923] [EC:6.3.2.6]
            11444747  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
            11429175  bifunctional purine biosynthesis protein PurH isoform X1 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
            11437125  bifunctional purine biosynthesis protein PurH isoform X1 [KO:K00602] [EC:2.1.2.3 3.5.4.10]
            25493618  adenine phosphoribosyltransferase 4 isoform X1 [KO:K00759] [EC:2.4.2.7]
            11436051  adenine phosphoribosyltransferase 5 isoform X1 [KO:K00759] [EC:2.4.2.7]
            11439020  adenine phosphoribosyltransferase 4 [KO:K00759] [EC:2.4.2.7]
            25489954  adenine phosphoribosyltransferase 1 [KO:K00759] [EC:2.4.2.7]
            11417330  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11425771  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11438663  uncharacterized protein LOC11438663 isoform X1 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            11439598  5'-nucleotidase SurE isoform X2 [KO:K03787] [EC:3.1.3.5 3.1.3.6]
            25485030  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
            11439043  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
            25500090  nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
            11407961  nucleoside diphosphate kinase 2, chloroplastic [KO:K00940] [EC:2.7.4.6]
            11413244  probable apyrase 6 [KO:K01510] [EC:3.6.1.5]
            112416222  nucleoside-triphosphatase-like [KO:K14641] [EC:3.6.1.5]
            25495872  apyrase 2 [KO:K14641] [EC:3.6.1.5]
            11443103  apyrase 2 [KO:K14641] [EC:3.6.1.5]
            11441027  nucleoside-triphosphatase [KO:K14641] [EC:3.6.1.5]
            11441028  nucleoside-triphosphatase isoform X1 [KO:K14641] [EC:3.6.1.5]
            11436281  nucleoside-triphosphatase [KO:K14641] [EC:3.6.1.5]
            25483117  inosine triphosphate pyrophosphatase [KO:K01519] [EC:3.6.1.66]
            11431418  xanthine dehydrogenase 1 isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
            25502051  GMP synthase [glutamine-hydrolyzing] [KO:K01951] [EC:6.3.5.2]
            25486064  guanylate kinase 3, chloroplastic [KO:K00942] [EC:2.7.4.8]
            11433812  guanylate kinase 2 isoform X3 [KO:K00942] [EC:2.7.4.8]
            11438405  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
            25488510  ribonucleoside-diphosphate reductase large subunit [KO:K10807] [EC:1.17.4.1]
            25502786  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25480771  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25497818  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25494012  ribonucleoside-diphosphate reductase small chain A [KO:K10808] [EC:1.17.4.1]
            25483253  ribonucleoside-diphosphate reductase small chain [KO:K10808] [EC:1.17.4.1]
            25480606  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            25494275  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            25494276  5'-deoxynucleotidase HDDC2 [KO:K07023] [EC:3.1.3.89]
            11421249  probable GTP diphosphokinase RSH2, chloroplastic [KO:K00951] [EC:2.7.6.5]
            25499616  putative GTP diphosphokinase RSH1, chloroplastic [KO:K00951] [EC:2.7.6.5]
            11428310  probable GTP diphosphokinase CRSH, chloroplastic [KO:K00951] [EC:2.7.6.5]
            11440429  adenylosuccinate synthetase 2, chloroplastic [KO:K01939] [EC:6.3.4.4]
            25502814  probable AMP deaminase [KO:K01490] [EC:3.5.4.6]
            112417574  AMP deaminase-like [KO:K01490] [EC:3.5.4.6]
            11411569  AMP deaminase [KO:K01490] [EC:3.5.4.6]
            25494427  LOW QUALITY PROTEIN: adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
            11421324  adenosine kinase 2 [KO:K00856] [EC:2.7.1.20]
            120576796  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
            11429873  adenylate kinase, chloroplastic [KO:K00939] [EC:2.7.4.3]
            11407139  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            25488395  adenylate kinase 5, chloroplastic [KO:K00939] [EC:2.7.4.3]
            25484059  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            11432926  adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            11432884  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
            11411926  cancer-related nucleoside-triphosphatase homolog isoform X4 [KO:K06928] [EC:3.6.1.15]
            11436512  venom phosphodiesterase 2 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
            11439434  ectonucleotide pyrophosphatase/phosphodiesterase family member 1 [KO:K01513] [EC:3.1.4.1 3.6.1.9]
            25489167  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [KO:K01522] [EC:3.6.1.29]
            25489168  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [KO:K01522] [EC:3.6.1.29]
            25489174  bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [KO:K01522] [EC:3.6.1.29]
            25495488  ATP sulfurylase 2 [KO:K13811] [EC:2.7.7.4 2.7.1.25]
            25485115  ATP sulfurylase 1, chloroplastic [KO:K13811] [EC:2.7.7.4 2.7.1.25]
            25498985  adenylyl-sulfate kinase 3 [KO:K00860] [EC:2.7.1.25]
            11407258  adenylyl-sulfate kinase 3-like isoform X1 [KO:K00860] [EC:2.7.1.25]
            11418757  adenylyl-sulfate kinase 3 isoform X1 [KO:K00860] [EC:2.7.1.25]
            25483173  uricase-2 isozyme 1 [KO:K00365] [EC:1.7.3.3]
            25500241  uric acid degradation bifunctional protein TTL isoform X2 [KO:K13484] [EC:3.5.2.17 4.1.1.97]
            11417093  hydroxyisourate hydrolase-like isoform X1 [KO:K19964] [EC:3.5.2.17]
            11415969  hydroxyisourate hydrolase-like isoform X1 [KO:K19964] [EC:3.5.2.17]
            11410877  hydroxyisourate hydrolase isoform X2 [KO:K19964] [EC:3.5.2.17]
            11424917  allantoinase [KO:K01466] [EC:3.5.2.5]
            25486381  allantoate deiminase 2 [KO:K02083] [EC:3.5.3.9]
            25493588  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
            11425622  ureidoglycolate hydrolase [KO:K18151] [EC:3.5.1.116]
            11429087  urease isoform X1 [KO:K01427] [EC:3.5.1.5]
COMPOUND    C00002  ATP
            C00008  ADP
            C00011  CO2
            C00014  Ammonia
            C00020  AMP
            C00035  GDP
            C00037  Glycine
            C00039  DNA
            C00044  GTP
            C00046  RNA
            C00048  Glyoxylate
            C00053  3'-Phosphoadenylyl sulfate
            C00054  Adenosine 3',5'-bisphosphate
            C00059  Sulfate
            C00064  L-Glutamine
            C00081  ITP
            C00086  Urea
            C00104  IDP
            C00117  D-Ribose 5-phosphate
            C00119  5-Phospho-alpha-D-ribose 1-diphosphate
            C00130  IMP
            C00131  dATP
            C00144  GMP
            C00147  Adenine
            C00169  Carbamoyl phosphate
            C00206  dADP
            C00209  Oxalate
            C00212  Adenosine
            C00224  Adenylyl sulfate
            C00242  Guanine
            C00262  Hypoxanthine
            C00286  dGTP
            C00288  HCO3-
            C00294  Inosine
            C00301  ADP-ribose
            C00330  Deoxyguanosine
            C00360  dAMP
            C00361  dGDP
            C00362  dGMP
            C00366  Urate
            C00385  Xanthine
            C00387  Guanosine
            C00499  Allantoate
            C00559  Deoxyadenosine
            C00575  3',5'-Cyclic AMP
            C00603  (S)-Ureidoglycolate
            C00620  alpha-D-Ribose 1-phosphate
            C00655  Xanthosine 5'-phosphate
            C00700  XTP
            C00802  Oxalureate
            C00942  3',5'-Cyclic GMP
            C01228  Guanosine 3',5'-bis(diphosphate)
            C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
            C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
            C01344  dIDP
            C01345  dITP
            C01367  3'-AMP
            C01444  Oxamate
            C01762  Xanthosine
            C02091  (S)-Ureidoglycine
            C02348  (R)(-)-Allantoin
            C02350  (S)-Allantoin
            C02353  2',3'-Cyclic AMP
            C02718  N-Formiminoglycine
            C03090  5-Phosphoribosylamine
            C03373  Aminoimidazole ribotide
            C03483  Adenosine tetraphosphate
            C03614  Inosine 5'-tetraphosphate
            C03794  N6-(1,2-Dicarboxyethyl)-AMP
            C03838  5'-Phosphoribosylglycinamide
            C04051  5-Amino-4-imidazolecarboxyamide
            C04376  5'-Phosphoribosyl-N-formylglycinamide
            C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
            C04494  Guanosine 3'-diphosphate 5'-triphosphate
            C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
            C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
            C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
            C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
            C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
            C05239  5-Aminoimidazole
            C05512  Deoxyinosine
            C05513  Urate-3-ribonucleoside
            C05515  5-Ureido-4-imidazole carboxylate
            C05516  5-Amino-4-imidazole carboxylate
            C05993  Acetyl adenylate
            C06193  Guanosine 3'-phosphate
            C06194  2',3'-Cyclic GMP
            C06195  Imidazolone
            C06196  2'-Deoxyinosine 5'-phosphate
            C06197  P1,P3-Bis(5'-adenosyl) triphosphate
            C06433  5'-Benzoylphosphoadenosine
            C06435  5'-Butyrylphosphoinosine
            C11821  5-Hydroxyisourate
            C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
            C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
            C22395  N6-Succino-2-amino-2'-deoxyadenylate
            C22441  dZMP
            C22442  dZDP
            C22443  dZTP
            C22499  8-Hydroxyadenine
            C22500  2,8-Dihydroxyadenine
REFERENCE   PMID:10601204
  AUTHORS   Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  TITLE     Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  JOURNAL   J Bacteriol 181:7479-84 (1999)
            DOI:10.1128/JB.181.24.7479-7484.1999
REFERENCE   PMID:10986234
  AUTHORS   Xi H, Schneider BL, Reitzer L.
  TITLE     Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  JOURNAL   J Bacteriol 182:5332-41 (2000)
            DOI:10.1128/JB.182.19.5332-5341.2000
REL_PATHWAY mtr00030  Pentose phosphate pathway
            mtr00220  Arginine biosynthesis
            mtr00250  Alanine, aspartate and glutamate metabolism
            mtr00260  Glycine, serine and threonine metabolism
            mtr00340  Histidine metabolism
            mtr00630  Glyoxylate and dicarboxylate metabolism
            mtr00730  Thiamine metabolism
            mtr00740  Riboflavin metabolism
            mtr00790  Folate biosynthesis
KO_PATHWAY  ko00230
///
