ENTRY       gmx00730                    Pathway
NAME        Thiamine metabolism - Glycine max (soybean)
CLASS       Metabolism; Metabolism of cofactors and vitamins
PATHWAY_MAP gmx00730  Thiamine metabolism
MODULE      gmx_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:gmx00730]
            gmx_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:gmx00730]
DBLINKS     GO: 0006772
ORGANISM    Glycine max (soybean) [GN:gmx]
GENE        100786478  phosphomethylpyrimidine synthase, chloroplastic [KO:K03147] [EC:4.1.99.17]
            100787350  phosphomethylpyrimidine synthase, chloroplastic [KO:K03147] [EC:4.1.99.17]
            100811722  thiamine biosynthetic bifunctional enzyme TH1, chloroplastic [KO:K14153] [EC:2.7.1.49 2.7.4.7 2.5.1.3]
            100817332  thiamine biosynthetic bifunctional enzyme TH1, chloroplastic [KO:K14153] [EC:2.7.1.49 2.7.4.7 2.5.1.3]
            100785725  cysteine desulfurase, mitochondrial [KO:K04487] [EC:2.8.1.7]
            100789340  cysteine desulfurase, mitochondrial [KO:K04487] [EC:2.8.1.7]
            100301901  DXS1; 1-deoxy-D-xylulose 5-phosphate synthase 1 [KO:K01662] [EC:2.2.1.7]
            100793268  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100798930  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100799983  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100799481  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100787937  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X2 [KO:K01662] [EC:2.2.1.7]
            100776569  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100789279  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100814637  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X2 [KO:K01662] [EC:2.2.1.7]
            100819373  probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100786607  probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [KO:K01662] [EC:2.2.1.7]
            100788953  thiamine thiazole synthase 2, chloroplastic [KO:K03146] [EC:2.4.2.60]
            547461  SC-04; thiamin biosynthetic enzyme [KO:K03146] [EC:2.4.2.60]
            100794288  thiamine thiazole synthase 2, chloroplastic [KO:K03146] [EC:2.4.2.60]
            547462  SC-03; thiamin biosynthetic enzyme [KO:K03146] [EC:2.4.2.60]
            100775614  thiamine thiazole synthase 1, chloroplastic [KO:K03146] [EC:2.4.2.60]
            100786113  hydroxyethylthiazole kinase isoform X2 [KO:K00878] [EC:2.7.1.50]
            100527302  uncharacterized protein LOC100527302 [KO:K06928] [EC:3.6.1.15]
            100801862  small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [KO:K06949] [EC:3.6.1.- 3.1.3.100]
            100796145  small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [KO:K06949] [EC:3.6.1.- 3.1.3.100]
            100788250  bifunctional TH2 protein, mitochondrial isoform X1 [KO:K22911] [EC:3.1.3.100 3.5.99.-]
            100813450  bifunctional TH2 protein, mitochondrial isoform X4 [KO:K22911] [EC:3.1.3.100 3.5.99.-]
            100786303  thiamine pyrophosphokinase 2 isoform X1 [KO:K00949] [EC:2.7.6.2]
            100795320  uncharacterized protein LOC100795320 [KO:K00949] [EC:2.7.6.2]
            100818561  adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            100779881  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            100790268  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            100791848  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            100796331  adenylate kinase 5, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
            100784319  uncharacterized protein LOC100784319 [KO:K00939] [EC:2.7.4.3]
            100784111  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
            100777619  probable adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            102666238  adenylate kinase 1, chloroplastic [KO:K00939] [EC:2.7.4.3]
            100814972  adenylate kinase 4 [KO:K00939] [EC:2.7.4.3]
            100784021  probable adenylate kinase 7, mitochondrial [KO:K00939] [EC:2.7.4.3]
            100818830  adenylate kinase 5, chloroplastic isoform X1 [KO:K00939] [EC:2.7.4.3]
            547557  TENA_E; probable bifunctional TENA-E protein [KO:K20896] [EC:3.5.1.- 3.5.99.-]
COMPOUND    C00003  NAD+
            C00018  Pyridoxal phosphate
            C00022  Pyruvate
            C00037  Glycine
            C00068  Thiamin diphosphate
            C00082  L-Tyrosine
            C00097  L-Cysteine
            C00118  D-Glyceraldehyde 3-phosphate
            C00378  Thiamine
            C01081  Thiamin monophosphate
            C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
            C02892  Thiamine acetic acid
            C03028  Thiamin triphosphate
            C03373  Aminoimidazole ribotide
            C04294  5-(2-Hydroxyethyl)-4-methylthiazole
            C04327  4-Methyl-5-(2-phosphooxyethyl)thiazole
            C04556  4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine
            C04752  4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate
            C05856  Thiamine aldehyde
            C11437  1-Deoxy-D-xylulose 5-phosphate
            C15809  Iminoglycine
            C15810  Sulfur-carrier protein
            C15811  [Enzyme]-cysteine
            C15812  [Enzyme]-S-sulfanylcysteine
            C15813  Adenylyl-[sulfur-carrier protein]
            C15814  Thiocarboxy-[sulfur-carrier protein]
            C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
            C20246  2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
            C20247  2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate
            C20267  4-Amino-5-aminomethyl-2-methylpyrimidine
            C20784  ADP-5-ethyl-4-methylthiazole-2-carboxylate
REFERENCE   PMID:15614489
  AUTHORS   Kawasaki Y, Onozuka M, Mizote T, Nosaka K.
  TITLE     Biosynthesis of hydroxymethylpyrimidine pyrophosphate in Saccharomyces cerevisiae.
  JOURNAL   Curr Genet 47:156-62 (2005)
            DOI:10.1007/s00294-004-0557-x
REFERENCE   PMID:14567704
  AUTHORS   Park JH, Dorrestein PC, Zhai H, Kinsland C, McLafferty FW, Begley TP.
  TITLE     Biosynthesis of the thiazole moiety of thiamin pyrophosphate (vitamin B1).
  JOURNAL   Biochemistry 42:12430-8 (2003)
            DOI:10.1021/bi034902z
REFERENCE   PMID:22616866
  AUTHORS   Begley TP, Ealick SE, McLafferty FW
  TITLE     Thiamin biosynthesis: still yielding fascinating biological chemistry.
  JOURNAL   Biochem Soc Trans 40:555-60 (2012)
            DOI:10.1042/BST20120084
REFERENCE   PMID:12777485
  AUTHORS   Wightman R, Meacock PA
  TITLE     The THI5 gene family of Saccharomyces cerevisiae: distribution of homologues among the hemiascomycetes and functional redundancy in the aerobic biosynthesis of thiamin from pyridoxine.
  JOURNAL   Microbiology 149:1447-60 (2003)
            DOI:10.1099/mic.0.26194-0
REFERENCE   PMID:22031445
  AUTHORS   Chatterjee A, Abeydeera ND, Bale S, Pai PJ, Dorrestein PC, Russell DH, Ealick SE, Begley TP
  TITLE     Saccharomyces cerevisiae THI4p is a suicide thiamine thiazole synthase.
  JOURNAL   Nature 478:542-6 (2011)
            DOI:10.1038/nature10503
REFERENCE   PMID:19348578
  AUTHORS   Jurgenson CT, Begley TP, Ealick SE
  TITLE     The structural and biochemical foundations of thiamin biosynthesis.
  JOURNAL   Annu Rev Biochem 78:569-603 (2009)
            DOI:10.1146/annurev.biochem.78.072407.102340
REL_PATHWAY gmx00010  Glycolysis / Gluconeogenesis
            gmx00230  Purine metabolism
            gmx00260  Glycine, serine and threonine metabolism
            gmx00270  Cysteine and methionine metabolism
            gmx00400  Phenylalanine, tyrosine and tryptophan biosynthesis
            gmx00750  Vitamin B6 metabolism
KO_PATHWAY  ko00730
///
