ENTRY       ath01110                    Pathway
NAME        Biosynthesis of secondary metabolites - Arabidopsis thaliana (thale cress)
PATHWAY_MAP ath01110  Biosynthesis of secondary metabolites
MODULE      ath_M00012  Glyoxylate cycle [PATH:ath01110]
            ath_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ath01110]
            ath_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ath01110]
            ath_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ath01110]
            ath_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ath01110]
            ath_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ath01110]
            ath_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ath01110]
            ath_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:ath01110]
            ath_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ath01110]
            ath_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:ath01110]
            ath_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ath01110]
            ath_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:ath01110]
            ath_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:ath01110]
            ath_M00113  Jasmonic acid biosynthesis [PATH:ath01110]
            ath_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:ath01110]
            ath_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ath01110]
            ath_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ath01110]
            ath_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:ath01110]
            ath_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:ath01110]
            ath_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:ath01110]
            ath_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:ath01110]
            ath_M00370  Glucosinolate biosynthesis, tryptophan => glucobrassicin [PATH:ath01110]
            ath_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:ath01110]
            ath_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ath01110]
            ath_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ath01110]
            ath_M00532  Photorespiration [PATH:ath01110]
            ath_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:ath01110]
            ath_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:ath01110]
            ath_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:ath01110]
            ath_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:ath01110]
            ath_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:ath01110]
            ath_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:ath01110]
ORGANISM    Arabidopsis thaliana (thale cress) [GN:ath]
REL_PATHWAY ath00010  Glycolysis / Gluconeogenesis
            ath00020  Citrate cycle (TCA cycle)
            ath00030  Pentose phosphate pathway
            ath00053  Ascorbate and aldarate metabolism
            ath00073  Cutin, suberine and wax biosynthesis
            ath00100  Steroid biosynthesis
            ath00130  Ubiquinone and other terpenoid-quinone biosynthesis
            ath00220  Arginine biosynthesis
            ath00230  Purine metabolism
            ath00232  Caffeine metabolism
            ath00250  Alanine, aspartate and glutamate metabolism
            ath00260  Glycine, serine and threonine metabolism
            ath00261  Monobactam biosynthesis
            ath00270  Cysteine and methionine metabolism
            ath00280  Valine, leucine and isoleucine degradation
            ath00290  Valine, leucine and isoleucine biosynthesis
            ath00300  Lysine biosynthesis
            ath00340  Histidine metabolism
            ath00380  Tryptophan metabolism
            ath00400  Phenylalanine, tyrosine and tryptophan biosynthesis
            ath00440  Phosphonate and phosphinate metabolism
            ath00460  Cyanoamino acid metabolism
            ath00500  Starch and sucrose metabolism
            ath00564  Glycerophospholipid metabolism
            ath00592  alpha-Linolenic acid metabolism
            ath00630  Glyoxylate and dicarboxylate metabolism
            ath00650  Butanoate metabolism
            ath00740  Riboflavin metabolism
            ath00770  Pantothenate and CoA biosynthesis
            ath00860  Porphyrin metabolism
            ath00900  Terpenoid backbone biosynthesis
            ath00901  Indole alkaloid biosynthesis
            ath00902  Monoterpenoid biosynthesis
            ath00904  Diterpenoid biosynthesis
            ath00905  Brassinosteroid biosynthesis
            ath00906  Carotenoid biosynthesis
            ath00908  Zeatin biosynthesis
            ath00909  Sesquiterpenoid and triterpenoid biosynthesis
            ath00940  Phenylpropanoid biosynthesis
            ath00941  Flavonoid biosynthesis
            ath00942  Anthocyanin biosynthesis
            ath00944  Flavone and flavonol biosynthesis
            ath00945  Stilbenoid, diarylheptanoid and gingerol biosynthesis
            ath00950  Isoquinoline alkaloid biosynthesis
            ath00960  Tropane, piperidine and pyridine alkaloid biosynthesis
            ath00965  Betalain biosynthesis
            ath00966  Glucosinolate biosynthesis
            ath00999  Biosynthesis of various plant secondary metabolites
KO_PATHWAY  ko01110
///
