plot all trees with study titles and geochronological axis

Source: R/plots.R

plot all trees with study titles and geochronological axis

plot_phylo_all(
  trees,
  cex = graphics::par("cex"),
  include = TRUE,
  individually = TRUE,
  write = "no",
  file = "phylo_all"
)

Arguments

trees

A list of trees as multiPhylo or as a plain list object.
cex

a numeric value giving the factor scaling of the tip and node labels (Character EXpansion). The default is to take the current value from the graphical parameters.
include

Boolean or numeric vector. Default to TRUE, keep all chronograms in trees. If FALSE, exclude chronograms with only two tips. If numeric, it is used as indices to subset trees object.
individually

Boolean indicating if trees should be plotted one by one or all on the same file
write

A character vector of length 1. Use pdf or png to write a file on those formats respectively. Anything else will not write any image file.
file

A character string giving the name and path to write the files to.