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Get the Open Tree of Life Taxonomic identifiers (OTT ids) and name of one or several given taxonomic ranks from one or more input taxa.

Source: R/opentree_taxonomy.R
get_ott_clade.Rd

Get the Open Tree of Life Taxonomic identifiers (OTT ids) and name of one or several given taxonomic ranks from one or more input taxa.

Usage

get_ott_clade(input = NULL, ott_ids = NULL, ott_rank = "family")

Arguments

input

Optional. A character vector of names or a datelifeQuery object.

ott_ids

If not NULL, it takes this argument and ignores input. A numeric vector of ott ids obtained with rotl::taxonomy_taxon_info() or rotl::tnrs_match_names() or tnrs_match().

ott_rank

A character vector with the ranks you wanna get lineage children from.

Value

A list of named numeric vectors with OTT ids from input and all requested ranks.