/lustre/atlas2/csc206/proj-shared/kevin/sc16-amd-branch
nid03779
Application 12647075 resources: utime ~0s, stime ~0s, Rss ~7288, inblocks ~19, outblocks ~28
Welcome to Ludwig v0.5.59 (MPI version running on 2 processes)

The SVN revision details are: 2997
Read 31 user parameters from input

System details
--------------
System size:    128 128 128
Decomposition:  2 1 1
Local domain:   64 128 128
Periodic:       1 1 1
Halo nhalo:     2
Reorder:        true
Initialised:    1

Free energy details
-------------------

Blue phase free energy selected.

Liquid crystal blue phase free energy
Bulk parameter A0:         =  1.0000000e-02
Magnitude of order gamma   =  3.0000000e+00
Pitch wavevector q0        =  1.9635000e-01
... gives pitch length     =  3.1999925e+01
Elastic constant kappa0    =  6.4845600e-04
Elastic constant kappa1    =  6.4845600e-04
Amplitude (uniaxial) order =  3.3333333e-01
Effective aspect ratio xi  =  7.0000000e-01
Chirality                  =  3.0000080e-01
Reduced temperature        =  0.0000000e+00
Initial redshift           =  1.0000000e+00
Dynamic redshift update    =             no
LC activity constant zeta  =  0.0000000e+00

Liquid crystal anchoring
Anchoring method:          =            two
Anchoring type (colloids): =         normal
Anchoring type (walls):          =         normal
Surface free energy (colloid)w1: =  2.5938240e-03
Surface free energy (colloid)w2: =  0.0000000e+00
Surface free energy (wall) w1:   =  0.0000000e+00
Surface free energy (wall) w2:   =  0.0000000e+00
Ratio (colloid) w1/kappa0:       =  4.0000000e+00
Ratio (wall) w1/kappa0:          =  0.0000000e+00
Computed surface order f(gamma)  =  3.3333333e-01

Using Beris-Edwards solver:
Rotational diffusion const =  5.0000000e-01
LC fluctuations:           =  off

System properties
----------------
Mean fluid density:           1.00000e+00
Shear viscosity               1.00000e+00
Bulk viscosity                1.00000e+00
Temperature                   0.00000e+00
External body force density   0.00000e+00  0.00000e+00  0.00000e+00
External E-field amplitude    0.00000e+00  0.00000e+00  0.00000e+00
External E-field frequency    0.00000e+00
External magnetic field       0.00000e+00  0.00000e+00  0.00000e+00

Lattice Boltzmann distributions
-------------------------------
Model:            d3q19  
SIMD vector len:  1
Number of sets:   1
Halo type:        full
Input format:     binary
Output format:    binary
I/O grid:         1 1 1

Lattice Boltzmann collision
---------------------------
Hydrodynamic modes:       on
Ghost modes:              on
Isothermal fluctuations:  off
Shear relaxation time:    3.50000e+00
Bulk relaxation time:     3.50000e+00
Ghost relaxation time:    1.00000e+00
[User   ] Random number seed: 8361235

Hydrodynamics
-------------
Hydrodynamics: on

Order parameter I/O
-------------------
Order parameter I/O format:   
I/O decomposition:            1 1 1

Advection scheme order: 3
Gradient calcaulation: 3d_7pt_fluid


Initialising Q_ab to cholesteric
Helical axis Z
Initial conditions.

Scalars - total mean variance min max
[rho]     2097152.00  1.00000000000  0.0000000e+00  1.00000000000  1.00000000000
[phi]  1.7476388e+05  8.3333910e-02 3.1250069e-02 -1.6666667e-01 3.3333333e-01
[phi]  2.4079829e-01  1.1482157e-07 3.1249931e-02 -2.5000000e-01 2.5000000e-01
[phi]  0.0000000e+00  0.0000000e+00 0.0000000e+00  0.0000000e+00 0.0000000e+00
[phi]  1.7476146e+05  8.3332756e-02 3.1250069e-02 -1.6666667e-01 3.3333333e-01
[phi]  0.0000000e+00  0.0000000e+00 0.0000000e+00  0.0000000e+00 0.0000000e+00

Momentum - x y z
[total   ]  2.9103830e-11  0.0000000e+00  0.0000000e+00
[fluid   ]  2.9103830e-11  0.0000000e+00  0.0000000e+00

Starting time step loop.

Scalars - total mean variance min max
[rho]     2097152.00  0.99999999998  3.4473757e-11  0.99999999991  1.00000000302
[phi]  1.7303123e+05  8.2507719e-02 3.1029972e-02 -1.6661093e-01 3.3162533e-01
[phi]  2.2790390e-01  1.0867305e-07 3.1029859e-02 -2.4911811e-01 2.4911811e-01
[phi]  1.2694110e-12  6.0530235e-19 2.4351748e-33 -1.3127508e-16 1.0504498e-16
[phi]  1.7302894e+05  8.2506627e-02 3.1029972e-02 -1.6661097e-01 3.3162528e-01
[phi] -4.9039184e-13 -2.3383705e-19 1.3100910e-33 -9.2409055e-17 1.2802092e-16

Free energy density - timestep total fluid
[fed]           1000 -6.7377806476e-05 -6.7377806476e-05

Momentum - x y z
[total   ] -8.8897423e-10 -1.0114150e-09 -7.6170181e-11
[fluid   ] -8.8897423e-10 -1.0114150e-09 -7.6170181e-11

Velocity - x y z
[minimum ] -4.8573987e-16 -5.3429854e-16 -1.6326076e-12
[maximum ]  1.1754944e-38  1.1754944e-38  1.6323752e-12

Completed cycle 1000

Timer resolution: 1e-06 second

Timer statistics
             Section:       tmin       tmax      total
               Total:    557.706    557.706    557.706 557.706276 (1 call)
      Time step loop:      0.551      0.727    556.656   0.556656 (1000 calls)
         Propagation:      0.051      0.075     53.628   0.053628 (1000 calls)
    Propagtn (krnl) :      0.051      0.075     53.623   0.053623 (1000 calls)
           Collision:      0.094      0.127     95.883   0.095883 (1000 calls)
   Collision (krnl) :      0.094      0.127     95.875   0.095875 (1000 calls)
       Lattice halos:      0.009      0.029      9.894   0.009894 (1000 calls)
       phi gradients:      0.038      0.070     39.981   0.039981 (1000 calls)
    phi grad (krnl) :      0.033      0.053     33.815   0.033815 (1000 calls)
           phi halos:      0.005      0.017      6.159   0.006159 (1000 calls)
                 BBL:      0.000      0.000      0.001   0.000001 (1000 calls)
   Force calculation:      0.161      0.193    161.481   0.161481 (1000 calls)
   Phi force (krnl) :      0.023      0.039     23.269   0.023269 (1000 calls)
          phi update:      0.185      0.251    189.957   0.189957 (1000 calls)
      Velocity Halo :      0.002      0.031      2.003   0.002003 (1000 calls)
BE mol field (krnl) :      0.042      0.048     42.775   0.042775 (1000 calls)
BP BE update (krnl) :      0.051      0.052     51.458   0.051458 (1000 calls)
     Advectn (krnl) :      0.047      0.083     48.661   0.048661 (1000 calls)
 Advectn BCS (krnl) :      0.034      0.046     38.173   0.038173 (1000 calls)
               Free1:      0.000      0.559      0.560   0.000560 (1000 calls)
Ludwig finished normally.
Application 12647076 resources: utime ~8910s, stime ~3s, Rss ~992404, inblocks ~1444, outblocks ~2572
