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*** ks0102   Job: 3860557.sdb   started: 05/08/16 13:08:23   host: mom5 ***
*** ks0102   Job: 3860557.sdb   started: 05/08/16 13:08:23   host: mom5 ***
*** ks0102   Job: 3860557.sdb   started: 05/08/16 13:08:23   host: mom5 ***
*** ks0102   Job: 3860557.sdb   started: 05/08/16 13:08:23   host: mom5 ***

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nid00025
Application 22722958 resources: utime ~0s, stime ~0s, Rss ~6044, inblocks ~24, outblocks ~28
Welcome to Ludwig v0.5.32 (Serial version running on 1 process)

The SVN revision details are: 2946M
Read 31 user parameters from input1

System details
--------------
System size:    128 128 128
Decomposition:  1 1 1
Local domain:   128 128 128
Periodic:       1 1 1
Halo nhalo:     2
Reorder:        true
Initialised:    1

Free energy details
-------------------

Blue phase free energy selected.

Liquid crystal blue phase free energy
Bulk parameter A0:         =  1.0000000e-02
Magnitude of order gamma   =  3.0000000e+00
Pitch wavevector q0        =  1.9635000e-01
... gives pitch length     =  3.1999925e+01
Elastic constant kappa0    =  6.4845600e-04
Elastic constant kappa1    =  6.4845600e-04
Amplitude (uniaxial) order =  3.3333333e-01
Effective aspect ratio xi  =  7.0000000e-01
Chirality                  =  3.0000080e-01
Reduced temperature        =  0.0000000e+00
Initial redshift           =  1.0000000e+00
Dynamic redshift update    =             no
LC activity constant zeta  =  0.0000000e+00

Liquid crystal anchoring
Anchoring method:          =            two
Anchoring type (colloids): =         normal
Anchoring type (walls):          =         normal
Surface free energy (colloid)w1: =  2.5938240e-03
Surface free energy (colloid)w2: =  0.0000000e+00
Surface free energy (wall) w1:   =  0.0000000e+00
Surface free energy (wall) w2:   =  0.0000000e+00
Ratio (colloid) w1/kappa0:       =  4.0000000e+00
Ratio (wall) w1/kappa0:          =  0.0000000e+00
Computed surface order f(gamma)  =  3.3333333e-01

Using Beris-Edwards solver:
Rotational diffusion const =  5.0000000e-01
LC fluctuations:           =  off

System properties
----------------
Mean fluid density:           1.00000e+00
Shear viscosity               1.00000e+00
Bulk viscosity                1.00000e+00
Temperature                   0.00000e+00
External body force density   0.00000e+00  0.00000e+00  0.00000e+00
External E-field amplitude    0.00000e+00  0.00000e+00  0.00000e+00
External E-field frequency    0.00000e+00
External magnetic field       0.00000e+00  0.00000e+00  0.00000e+00

Lattice Boltzmann distributions
-------------------------------
Model:            d3q19  
SIMD vector len:  4
Number of sets:   1
Halo type:        full
Input format:     binary
Output format:    binary
I/O grid:         1 1 1

Lattice Boltzmann collision
---------------------------
Hydrodynamic modes:       on
Ghost modes:              on
Isothermal fluctuations:  off
Shear relaxation time:    3.50000e+00
Bulk relaxation time:     3.50000e+00
Ghost relaxation time:    1.00000e+00
[User   ] Random number seed: 8361235

Hydrodynamics
-------------
Hydrodynamics: on

Order parameter I/O
-------------------
Order parameter I/O format:   
I/O decomposition:            1 1 1

Advection scheme order: 3
Gradient calcaulation: 3d_7pt_fluid


Initialising Q_ab to cholesteric
Helical axis Z
Initial conditions.

Scalars - total mean variance min max
[rho]     2097152.00  1.00000000000  0.0000000e+00  1.00000000000  1.00000000000
[phi]  1.7476388e+05  8.3333910e-02 3.1250069e-02 -1.6666667e-01 3.3333333e-01
[phi]  2.4079829e-01  1.1482157e-07 3.1249931e-02 -2.5000000e-01 2.5000000e-01
[phi]  0.0000000e+00  0.0000000e+00 0.0000000e+00  0.0000000e+00 0.0000000e+00
[phi]  1.7476146e+05  8.3332756e-02 3.1250069e-02 -1.6666667e-01 3.3333333e-01
[phi]  0.0000000e+00  0.0000000e+00 0.0000000e+00  0.0000000e+00 0.0000000e+00

Momentum - x y z
[total   ]  2.9103830e-11  0.0000000e+00  0.0000000e+00
[fluid   ]  2.9103830e-11  0.0000000e+00  0.0000000e+00

Starting time step loop.

Scalars - total mean variance min max
[rho]     2097152.00  1.00000000003  8.8264507e-11  0.99999999991  1.00000000302
[phi]  1.7303123e+05  8.2507719e-02 3.1029972e-02 -1.6661093e-01 3.3162533e-01
[phi]  2.2790390e-01  1.0867305e-07 3.1029859e-02 -2.4911811e-01 2.4911811e-01
[phi] -4.0732338e-12 -1.9422692e-18 6.5281035e-33 -2.5590456e-16 1.8333484e-16
[phi]  1.7302894e+05  8.2506627e-02 3.1029972e-02 -1.6661097e-01 3.3162528e-01
[phi] -7.0760153e-12 -3.3741070e-18 1.1339153e-32 -3.1590094e-16 2.9300874e-16

Free energy density - timestep total fluid
[fed]           1000 -6.7377806475e-05 -6.7377806475e-05

Momentum - x y z
[total   ]  4.3939963e-11  3.3821834e-11  1.1277734e-10
[fluid   ]  4.3939963e-11  3.3821834e-11  1.1277734e-10

Velocity - x y z
[minimum ] -3.8183385e-17 -4.8576693e-17 -1.6327390e-12
[maximum ]  1.0409405e-16  6.2457809e-17  1.6324786e-12

Completed cycle 1000

Timer resolution: 1e-06 second

Timer statistics
             Section:       tmin       tmax      total
               Total:    262.995    262.995    262.995 262.994981 (1 call)
      Time step loop:      0.259      0.341    261.957   0.261957 (1000 calls)
         Propagation:      0.043      0.051     43.080   0.043080 (1000 calls)
    Propagtn (krnl) :      0.043      0.051     43.076   0.043076 (1000 calls)
           Collision:      0.029      0.038     28.863   0.028863 (1000 calls)
   Collision (krnl) :      0.029      0.038     28.857   0.028857 (1000 calls)
       Lattice halos:      0.008      0.013      8.016   0.008016 (1000 calls)
       phi gradients:      0.036      0.052     35.694   0.035694 (1000 calls)
    phi grad (krnl) :      0.032      0.045     32.254   0.032254 (1000 calls)
           phi halos:      0.003      0.007      3.434   0.003434 (1000 calls)
                 BBL:      0.000      0.000      0.001   0.000001 (1000 calls)
   Force calculation:      0.048      0.054     48.537   0.048537 (1000 calls)
   Phi force (krnl) :      0.016      0.017     16.144   0.016144 (1000 calls)
          phi update:      0.091      0.117     93.910   0.093910 (1000 calls)
      Velocity Halo :      0.001      0.017      1.113   0.001113 (1000 calls)
BP BE update (krnl) :      0.038      0.039     38.272   0.038272 (1000 calls)
     Advectn (krnl) :      0.033      0.041     34.895   0.034895 (1000 calls)
 Advectn BCS (krnl) :      0.015      0.016     15.697   0.015697 (1000 calls)
               Free3:      0.000      0.477      0.479   0.000479 (1000 calls)
Ludwig finished normally.
Application 22722959 resources: utime ~3142s, stime ~5s, Rss ~1834012, inblocks ~7443, outblocks ~18254
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Resources requested: ncpus=24,place=free,walltime=00:20:00
Resources allocated: cpupercent=0,cput=00:00:01,mem=8724kb,ncpus=24,vmem=156996kb,walltime=00:04:28

*** ks0102   Job: 3860557.sdb   ended: 05/08/16 13:12:50   queue: S3849287 ***
*** ks0102   Job: 3860557.sdb   ended: 05/08/16 13:12:50   queue: S3849287 ***
*** ks0102   Job: 3860557.sdb   ended: 05/08/16 13:12:50   queue: S3849287 ***
*** ks0102   Job: 3860557.sdb   ended: 05/08/16 13:12:50   queue: S3849287 ***
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