Find simulation tools

@BioSimulators

 Find simulations

@BioSimulations

 Run simulations

@runBioSimulations

 Viz simulation results

@runBioSimulations

 Combine simulations

@Vivarium

 BioSimulators is a free registry of biosimulation tools. The registry includes tools for a broad range of frameworks (e.g., logical, kinetic), simulation algorithms (e.g., FBA, SSA), and model formats (e.g., BNGL, CellML, NeuroML/LEMS, SBML, Smoldyn). Many of the simulation tools provide Python packages, command-line programs, and Docker images with consistent interfaces. Together, BioSimulators makes it easier to run simulations. BioSimulators is powered by several conventions including SED-ML, KiSAO, COMBINE, and other standards. Helping investigators run biosimulations BioSimulators makes it easy to find tools that can run specific simulations and download and run them. The tools in the BioSimulators registry can run a broad range of modeling frameworks, simulation algorithms, and model formats. BioSimulators makes it easier for developers to compare simulation tools. This can be used to identify the strengths of different approaches, find bugs, and drive standardization. Consistent access to multiple modeling frameworks, algorithms, formats & tools About BioSimulators

BioSimulators was developed by the Center for Reproducible Biomedical Modeling , the Karr Lab at the Icahn School of Medicine at Mount Sinai , and the Center for Cell Analysis & Modeling at the University of Connecticut Health Center with support from the National Institutes of Health and the National Science Foundation.

BioSimulators is implemented using several open-source tools and cloud platforms. The simulators are available under the licenses specified for each simulator. The BioSimulators code is openly available under the MIT license .

Please see the documentation for more information.