Find simulation tools

@BioSimulators

 Find simulations

@BioSimulations

 Run simulations

@runBioSimulations

 Viz simulation results

@runBioSimulations

 Combine simulations

@Vivarium

 BioSimulators is a free registry of biosimulation tools. The simulators support a broad range of frameworks (e.g., logical, kinetic), simulation algorithms (e.g., FBA, SSA), and formats (e.g., BNGL, CellML, NeuroML/LEMS, SBML, Smoldyn). Many of the simulators provide Docker images that support a consistent interface that builds on SED-ML, COMBINE, and other standards. Together, BioSimulators makes it easier to execute simulations. BioSimulators is powered by several standards for specifications, interfaces, and images of simulators and reports of simulation results. Helping investigators execute biomodeling studies The tools in the BioSimulators registry can execute a broad range of modeling frameworks, simulation algorithms, and model formats. By making it easier to execute simulations, BioSimulators makes it easier for investigators to reuse published simulations and for peer reviewers to evaluate simulations. BioSimulators makes it easier for developers to compare simulation tools. This can be used to identify the strengths of different approaches, find bugs, and drive standardization. Consistent access to multiple modeling frameworks, algorithms, formats & tools About BioSimulators

BioSimulators was developed by the Center for Reproducible Biomedical Modeling , the Karr Lab at the Icahn School of Medicine at Mount Sinai , and the Center for Cell Analysis & Modeling at the University of Connecticut Health Center with support from the National Institutes of Health and the National Science Foundation.

BioSimulators is implemented using several open-source tools and cloud platforms. The simulators are available under the licenses specified for each simulator. The BioSimulators code is openly available under the MIT license .

Please see the about page for more information.