path_project="/Volumes/cluster/Claire/SO_PaperI/manuscript"
path_softwares_exe="/Volumes/cluster/Claire/SO_PaperI/manuscript/software"
subpath_pool_rename="/BAMs/BAMs_SamOr/raw/Pool_280a"

subpath_raw_BAM="/BAMs/BAMs_SamOr/raw"
subpath_processed_BAM="/BAMs/BAMs_SamOr/processed" 

subpath_BAM_var_call="/results/processed_BAM"

subpath_fasta="/annotations"
subpath_raw_vcf="/results/raw_vcf"

