
seed used = 996434853

Before deleting alignment gaps
     21   1395

D_rerio_2                                  ATG GCA --- GTG GTG TTT CTT TCC CTG TGT GTT TGC ATG GCT TTA TCT CTG AGC CAC GCA GCG CCG GCA CAA --- CAT GAT GTT ATG CTG AAA GAT GCC --- --- --- --- --- --- --- --- --- --- --- --- --- --- CCT GAG GAC CAC CAT GAA GAC CGA TGT AAA GGT ATT GAA TTT GAT GCC ATC GCT CCA GAC GAG AAA GGA --- AAC ACT TTC TTT TTC AAA GTA GGT GAC CGT TTG TGG AAG GGT TTA ACT GGA GCA TCT GTG CTC TCG AGC AGT GTA TTC ACA GAG CTG GAT GAC TAT GCT CAC CTG GGT CAC GTT GAT GCA GCT TTC CGC ATG CAC CAT GAA --- --- CAT GAC GCC AGC AGT CAT GAC CAC ATC TAC TTC TTT CTG GAT GAT AAA GTC TTC AGC TAC TAC AAC TAC ACA CTT GAA AAA GGC TAC CCA ATG GAG ATC CAG CAG GAG TTT CCT GGC GTC CCC AGC CAT CTA GAT GCT GCT GTC GAG TGT CCC AAA GGC GAA TGC ATC ACG GAT TCG GTG CTC TTC TTC AAA GGA AAT GAA GCC TAT AGT TTC GAC ATC AAG ACA AAG TCG GTT AAG AAG AAG GTG --- --- --- --- --- --- TGG ACA CAT TTA CCA AAC TGC ACT TCT GCT TTC CGC TGG CTC GAG CAC TAC TAT TGC TTT CAT GGT CAC AAC TTC ACC AGA TTT CAT CCA GTT ACT GGG GAG GTC ACG GGA AAT TAT CCT AAA GAT GCA CGA AAC TAC TTC ATG AGG TGT GGT GAA GGA TTC GGT --- --- --- CAT GGA GGA GGT GCA AGA AAA CTG CGC TGC AGT GAG GTC AAG CTG GAT GCC ATC AGC GCT GAT GAG AGA GGC AGA ATG TAT GCG TTC CAG GAT GTG ATG TAC GTG AGA TTG GAC ACA CAC CGA GAT GGC AGT CAC CAT TTC CCC ATT TCC AGG TTA TGG AAG GAA ATC TCC GGT CGA GTG GAT GCT GCG TTT GCT TAT GGA GAA AAT ATG TAC ATC ATT CAG GGT GAT CAG GTC TAC ATC TAT AAG TCT GCA GTC CAT TAT ACC CTG ATT GAG GGC TAT CCA AAA CCT CTG AAG GAA GAG CTG GGC ATT GAT GGT CCT GTG AAC GCA GCA TTT CTC TGC CCA CAA CAA CAC ACT GTT CAC ATT ATA AAA --- GAT CAA AAG ATG TAT GAT GTT GAC CTT GTG GCC ACC CCC CGA ACT GCT CAA ACG GTG AGG CTT ATT CCC TTC GCT GAC ACT GAT GCT GGC TTT TGT GAT GCT GAA GGC CTG AAG GTG TTC ATC GGC CCA GAA TAT TAC TCC TAT GCA AAC CCA ACG CTT CTA GCC ATG AGC AGA CTC AGA CCT GAA CCT CGT CAG ATC TCT CCT GAA ACA TTT GGC TGT GAG GAA 
D_labrax_2                                 ATG GAG --- CTG TTC ACC AAA ACT CTG TTT CTG TGC TTA GCA CTY GCC CTC ACT AAT GGA GCC CCT GCT CTA CAA CAA GAT GCA GCA GTA GAA GAT GCT --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- GCT CTG CCA GAC CGG TGT GAA GGC ATT GAG TTT GAT GCC ATC ACT CCT GAC GAG AAA GGA --- ACC ACT TTC TTC TTC AAA --- GGT CCC CAC TTG TGG AAG GGT TAT CAT GGT TCG GCT CAG CCT TCC AAT GAG CAC TTC AAG GAG CTC GAT GAC ATC CAT AAC ATC GGC CAC GTT GAT GCT GCC TTC CGC ATG CAC AAC ATA --- --- GAT AAC CCA GAC AAA CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT AAC CAC ACC CTG GAA GAC GGG TAT CCT AAA CAG ATC CAA GAT GAC TTC CCA GGA GTC CCC ACT CAT CTG GAT TCT GCT GTG GAG TGC CCC AAA GGA GAA TGC ATG GCT GAC TCA GTT TTG TTC TTC AAG GGA CAT GAT GTC CAT CTT TAT GAT ATT ACC ACA AAG ACA GTG AAG ACC AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCC GTC TGC ACC TCT GCT TTA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCG GTA TCC GGA GAG GTG AAC GGT ACC TAC CCA AAG GAC GCC CGC AAT TAC TTC ATG GGG TGC GCT GAC --- TTT GGT --- --- --- CAT GGA GGT GGT TAT CGA CCC CGT AAA TGC AGT GAG GTC AAA ATA GAT GCC ATC ACC ACT GAC GAT GCT GGC AAA ACT TAT TTC TTT GCA GGC CCC ATC TAC ATG CGT CTG GAC ACC CAT CGA GAC GGC CTT CAC GCC TTC CCG ATC ACC AGG GCG TGG AAG GAG GTG ACC AAT GGA GTG GAC GCT GTC TTT TCC TAC ACT GAC AAA ATC TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAT AAA GCA GCG GCT CAC TAC ACC CTG ATC GAA GGT TAC CCT AAG ACT GTG AAG GAG GAG CTG GGC GTT GAA GGA CGC GTG GAC GCT GCT TTT GTG TGT CCT GAT GAC AAC ACA GTT CAT ATA ATC CAA --- GGA CAG AGG ATT CTT TAT GTT GAC CTG ACC GCC ACG CCC AGG GCT GTG ACC CAA AAT CTG CCC TTG CCC TTG GAC GGC ATC GAC GCT GCT CTG TGC AAC GCA AAG GGA ATT GAC TTG TTC AAG GGC CCC CAG TAT TAC CAC TAT GAG AGC CCC ATG ATA CTG GCT ATG GGC AGA ATG GCC CCT TTG CCC GAG AAC ATC ACC TCA ACA ATG ATG GGA TGT CAG GAT 
D_mawsoni_2                                ATG GAG --- CTG TTC ACC AAA ACT CTG TTT CTG TGC CTA GCA CTC GCC CTT ACT AAT GGA GCA CCT GCG CAC --- CAT GAT GCA GCA GTA GAC GAT GCT --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- TCT CTA CCA GAC CGG TGT GAT GGG ATT GGG TTT GAT GCC ATT ACT CCT GAC GAG CAA GGA --- ACC ACT TTC TTC TTC AGA --- GGT AGC CAC TTG TGG GAA GGC TTT CGT GGT CCA GCT CAG CTG TCC AAT GGG TCC TTC CAG GAG CTT GAT GAC --- --- --- ATC GGC CAT GTT GAT GCC GCC TTC CGC ATG CAC GAC ATA --- --- GAG CAC CTA --- --- CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT GCC CAC CAT CTG GAA GAA GGG TAT CCG AAA GAA ATC CAG CAA GAC TTC CCA GGA GTC CCC TCT CAT CTG GAC GCT GCT GTG GAG TGC CCC AAA GGA GAG TGC ATG GCC GAC TCA GTT CTG TTC TTC AAG GGA AAG GAT GTA CAT GTT TAT GAC ATT GTA ACA AAG ACA GTG AAG ACC AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCC GTC TGC ACC TCT GCT TTG CGC TGG CTA GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACC AAG TTC CAC CCG GTA ACC GGA CAG GTG AAC GGT GTT TAC CCA AAG GAC GCC CGC AGT TAC TTC ATG AAG TGC CCC AAC --- TAC GGT --- --- --- CAT GGC GGT GAC TAC AAA GTC CGG AAA TGC AGT GAT GTC AAA ATA GAT GCC ATC ACC ACT GAC GAT GCA GGC AAA AGT TAC TTC TTC GCA GGC CCC ATC TAC ATG CGT CTG GAC ACC AGG CGT GAC GGC CGC CAC GCC TTC CCA ATC AGC AGG TCG TGG AAG GAG GTG ACA AGC GGG GTG GAT GCT GTC TTT TCC TAC GCT GAC AAC ATT TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAC AAA GCA GCT GCT CAC TAC ACC CTG ATT GCA GGA TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CAC GTG GAC GCT GCT TTC GTC TGT CCT GAT AAT CAC ACA GTT CAT ATT ATC ATA --- GGA GGG ACG ATT CGT GCG GTG GAC CTA TCT GCC ACG CCC AGG GCC GTG ACC CGG GAG ATG CCC CTG CCT TTC TCC GAC ATT GAC GCT GCT TTG TGC AGT GCA GAA GGA GTT AAT GTG TTC AAA GGT GCA ACG TAT TAC CAC TAC GAA AGC CCC ATG ACA CTG GCT ATG AGC AGA ATT GCC CCT GAG CCT CTA AAT GTT ACC AGA GCA ATG ATG GGA TGT GAG GAA 
G_aculeatus_2                              ATG GAG --- CTG CTC ACC AAA ACT CTG TTT CTG TGC CTA GCT CTT GCT CTC ACC AAT GGA TTA CCT GTC CAG --- CCC CTT GAC GCT GCA GCA GAG GTA --- --- --- --- --- AAG CAA CGA TTG ACG TTA TCT GTG TGT TTA GAT GCT GCA CTA CCA GAC CGC TGC GCC GGC ATC GAG TTT GAT GCC ATC ACT CCT GAT GAG AAA GGA --- AAC ACT TTC TTC TTC AAA --- GGC AGC CAC TTG TGG AAG GGT TAC CAC GGT GCG GCT CAG CTC GCC AAT CAG TTC TTC ACA GAG CTC GAT GAC ATC CAT CAC ATC GGC CAC GTG GAC GCA GCC TTC CGC ATG CAC AAC GCA --- --- GCA AAC --- --- --- CAT GAG CAC AAC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAC AAC CAC ACT CTG GAG AAC GGC TAC CCC AAG GAG ATC CAG GAG GAC TTC CCA GGA GTC CCC TCG CAT CTG GAT GCT GCC GTA GAG TGT CCC AAA GGA GAG TGC ATG GCT AAC TCG GTT CTG TTC TTC AAG GGC CAC GAT GTG CAT ATA TAT GAT ATT ACC ACA AGG ACG GTG AAG ACC AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCC GTC TGC ACC TCC GCT CTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA AAC AAC TTC ACC AGG TTC AAT CCG GTG TCC GGA GAG GTG AGC GGT GCC TAC CCC AAG GAC GCC CGC CAC TAC TTC ATG AGG TGC CCC GAC --- TTC GGT --- --- --- CAT GGA GGT GAC TAT GAA GTC CCA AAA TGC AGC GAG ATC AAA ATA AAT GCC ATC TCT ACC GAT GAT GAA GGC AAA AGT TAT TTA TTT TCA GGT TCC ATG TAC GTG CGT CTG GAC ACG CGT AAA AGC GGC CTT CAT TCC TTC CCG ATC ACC AGG TCG TGG AAG GAG GTC ACC CAA GGG GTG GAC GCC GTC TTT GCC TAC GAT GAC AAG ATG TAC ATG ATT AAG GAT GAC CAC GTT TAC ATC TAC AAA ACG GCG GCT CAC TAC ATG CTG ATC GAA GGC TAC CCC AAA ACC CTG AAC GAG GAG CTC GGC ATC GAG GGA CAC GTG GAC GCT ACT TTT GTC TGT CCA AAT ACA CAC ACA GTT TAT GTA CTC CAA --- GGA CGG AAT ATG CGT TCC GTG GAC CTT ACC GCC ACC CCC AGG GCC GTG GTG GAG GAT CTA CCC ATG CCT TTC TCC GAC ATA GAC GCC GCT CTG TGC AGT AAT GAA GGA ATC CAT TTG TTC AAG GGC TCT GAC TAT TAC CTC TAC GAG ACC CCC ATG ATA CTG GCT ATG AGC AGG ATG GCC CCT GTG CCT CAG CCC GTG ACC AAC GCC TTG TTG GGG TGT CAG GAT 
H_antarcticus_2                            ATG GAG --- CTG TTC ACC AAA ACT CTG TTT CTG TGC CTA GCA CTC GCC CTT ACC CAG GGA GCT CCT GCG CAC --- CAT GAT GCA GCA GTA GAC GAT GCT --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- TCT CTA CCA GAC CGG TGT GAT GGG ATT GGG TTT GAT GCC ATT ACT CCT GAC GAG AAA GGA --- ACC ACT TTC TTC TTC AGA --- GGT AGC CAC TTG TGG GAA GGC TTT CAT GGT CCA GCT CAG CTG TCC AAT GAG TCC TTC CAG CAG CTT GAT GAC ATC CAT AAC ATC GGC CAT GTT GAT GCC GCC TTC CGC ATG CAC AAC ATA --- --- GAG CAC CTA GAC GAC CAC GAT CAC ATC TAT TTA TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT GAG CAA GCT CTG GAA GAA GGG TAT CCG AAA GAA ATC CAG CAA GAC TTC CCA GGA GTC CCC TCT CAT CTG GAC GCG GCT GTG GAG TGC CCC AAA GGA GAG TGC ATG GCC GAC TCA GTT CTG TTC TTC AAG GGA CAG GAT GTA CAT GTT TAT GAC ATT GTA ACA AAG ACA GTG AAG ACC AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCT GTC TGC ACC TCT GCT TTG CGC TGG CTA GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACC AAG TTC CAC CCG GTA TCC GGA GAG GTG AGC GGT GTT TAC CCA AAA GAC GCC CGC AGT TAC TTC ATG AAG TGC CCC GAC --- TAC GGT --- --- --- CAT GGC GGT GAC CAC AAA GTC CTG AAA TGC AGT GAT GTC AAA ATA GAT GCC ATC ACC ACT GAT GAT GCA GGC AAA AGT TAC TTC TTC GCA GGC CCC ATC TAC ATG CGT CTG GAC ACC AAG CGT GAC GGC CTC CAC GCC TTC CCA ATC ACC AGG TCG TGG AAG GAG GTG ACC AAC GGG GTG GAT GCT GTC TTT TCC TAC GCT GAC AAC ATT TAC TTG ATT AAG GAT GAT CAG GTG TAC ATC TAC AAA GCA GCT GCT CAC TAC ACC CTG ATT GAA GGA TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CAC GTG GAC GCT GCT TTC GTC TGT CCT GAT GAC CAC ACA GTT CAT ATT ATC ATA --- GGA CGG ACG ATT CGT GCG ATC GAC CTA TCT GCC ACG CCA AGG GCC GTG ACC CGG GAG AGG CCC CTG CCT TTC TCC GAC ATT GAC GCT GCT TTG TGC AGT GCA GAT GGA ATT AAT GTA TTC AAA GGT GCA ACG TAT TAC CGC TAC GAA AGC CCC ATG ACA CTG GCT ATG AGC AGA ATC GCC CCT GAG CCT CTA AAT GTT ACC AGA GCA ATG ATG GGA TGT GAG GAG 
I_furcatus_2                               ATG AAG --- CGG CTC TTG GTA TTC TTT TGT GCG TGC TTT GTT CTG CCT CTG AGC TAT ACA GCA CCA GCC CAC --- CAT GCT GCT ATA GAA CAT GCT GAA --- --- --- --- --- GAA AAT CCA CAA GTT GAT GAC GAT TCC CAT TAC AAT GCC AAG TAT GAC CGC TGT GAG GGC ATC GAG TTT GAC GCT ATA GCT CCT GAC AAG AAA GGA --- ACC GCA CTC TTT TTT AAA --- GGA GAC CAT TTA TGG AAG GGG TTT TCA GGC CCT GCT GAG CTT GCA AAT GCT ACA TTC CAG GAA TTA GAT GAA TAT CAT CAC CTG GGT CAT GTG GAT GCA GCC TTC CGC ATG CAC AAT AAA ACT GAG GAA GAC AGC AAA CAC CAT GAC CAT GTC TTC TTC TTT CTG GAT GAC CAA GTC TTT AGT TAC TAC RAC CAC ACT TTG GAG AAA GAC TTC CCT CTG GAG ATC CAG CAG GTG TTT CCA GGT GTT CCC AGC CAC CTC GAT GCA GCA GTG GAG TGT CCA AAA GGA GAG TGC ACT ACT GAC TCG GTC CTG TTC TTC AAG GGA CAT GAA GTG TAC AAC TTT GAT ATC CAG ACC AAG ACC GTG AAG AAG AAG GTG --- --- --- --- --- --- TGG GAT CAC TTG CCT GTC TGC ACA TCT GCA TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAT GGT CAC AAC TTT ACC AGA TTT CAT CCC CTG TCT GGA GAA GTG GAA GTT AAT TAT CCC AAG GAA ACT AGA CGT TAC TTC ATG AGA TGC CCR AAT --- GTT GGT --- --- --- CAC GGG GCT GGC CAC AGA AGG CCG CGC TGT --- --- --- AAA CTT GAT GCC ATC ACT ACA GAC AGC ACT GGC AAA TCC TAT GCA TTT ATC GGG ATA ATG TAC ATT AGA TTG GAC ACA CAC CGT GAT GGC ATT CAT CCC TTC CCC ATT GTA AGA TCA TGG AAG GAA GTC TCA GGA CAT GTA GAT GCT GTG TTC TCT TAT GGT GAC AGG ATT TAC ATC ATC CAG CGT GAT CAA ATT TAT ATC TAC AAA TCG GCA GCA CAT TAC ACA CTC ATA GAG GGC TAT CCT AAA CCG CTG AAG GAG GAG TTG GGC ATT GAC GGA CCC GTG GAT GCT GCA TTT GTA TGT --- GAC GAA CAT ATT GTA CAT GTT ATA CAA --- GGT CAG AAA ATG CTC GAT ATT GAT CTG GAA GCG ACC CCA AGA GCT GTG AAG ACC GAG GCT CCA CTG CCC TTC TCT AAA ATT GAT GCT GCT ACA TGT CAC ACT GAT GGT GTG AAA GTG TTT GTT GGT GGG GAA TAC TAC CTG TAC CAG AGT CCT AAA CTG CTT GCT ACA AGC AAG ATT AAC CCA GTA CCC CAC AAG ATC TCA TCT GAA TTG TTT GGT TGT GAA GAA 
I_punctatus_2                              ATG AAG --- CGG CTC TTG GTA TTC TTT TGT GCG TGC TTT GTT CTG CCT CTG AGC TAT ACA GCA CCA GCC CAC --- CAT GCT GCT ATA GTT TTC GAA CAT --- --- --- GCT GAA GAA AAT CCA CAA GTT GAT GAC GAG TCC CAT TAC AAT GCC AAG TAT GAC CGC TGT GAG GGC ATC GAG TTT GAC GCC ATA GCT CCT GAC GAG AAA GGA --- ACC GCA CTC TTT TTT AAA --- GGA GAC CAT TTA TGG AAG GGG TTT TCA GGC CCT GCT GAG CTT GCA AAT GCT ACA TTC CAG GAA TTA GAT GAA TAT CAT CAC CTG GGT CAT GTG GAT GCA GCC TTC CGC ATG CAC AAT AAA GAT GGG AAA GAC AGC AAA CAC CAT GAC CAT GTC TTC TTC TTT CTG GAT GAC AAG GTC TTT AGT TAC TAC AAC CAC ACT TTG GAG AAA AGC TTC CCT CTG GAG ATC CAG CAG GTG TTT CCA GGT ATT CCC AGC CAC CTC GAT GCA GCA GTG GAG TGT CCA AAA GGA GAG TGC ACT ACT GAC TCG GTC CTG TTC TTC AAA GGA CAT GAA GTG TAC AAG TTT GAT ATC CGG AAC AAC ACC GTG AAG AAG AAG GTG --- --- --- --- --- --- TGG GAT CAC TTG CCT GTC TGC ACA TCT GCA TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTT ACC AGA TTT CAT CCC TTG TCT GGA GAA GTG GAA GCT AAT TAT CCC AAG GAA ACT AGA CGT TAC TTC ATG AGC TGC CCA AAT --- TTT GGT --- --- --- CAC GGG GCT GGC CAC AGA AGG CCG CGC TGT --- --- --- AAA CTC GAT GCC ATC ACT ACA GAC AGC ACT GGC AAA TCC TAT GCA TTT ATC GGG ATA ATG TAC ATT AGA TTG GAC ACA CTC CGT GAT GGC ATT CAT CCC TTC CAC ATT GTA AGA TCA TGG AAG GAA GTC TCA GGA CAT GTA GAT GCT GTG TTC TCT TAT GGT GAC AAG ATT TAC ATC ATC CAG CGT GAT CAA ATT TAT ATC TAC AAA TCG GCA GCA CAT TAC ACA CTC ATA GAG GGC TAT CCT AAA CCG CTG AAG GAG GAG TTG GGC ATT GAC GGA CCC GTG GAT GCT GCA TTT GTA TGT --- GAC GAA CAT ATT GTA CAT GTT ATA CAA --- GGT CAG AAA ATG CTC GAT ATT AAT CTG GAA GCG ACC CCA AGA GCT GTG AAG ACC GAG GCT CCA CTG CCC TTC TCT AAA ATT GAT GCT GCT ACA TGT CAC ACT GAT GGT GTG AAA GTG TTT GTT GGT GGG GAA TAC TAC CTG TAC CAG AGT CCT AAA CTG CTT GCT ACA AGC AAG ATT AAC CCA GTA CCC CAC AAG ATC TCA TCT GAA TTG TTT GGT TGT GAA GAA 
L_japonicus_2                              ATG GAG --- CTG TTC ACC AAA ATT CTG TTT CTG TGC TTA GCA CTT GCC CTC ACA AAT GGA GCA CCT GCG GCG CCA CAA GAT GCA GCA GTA GAT GAT GGA --- --- --- --- --- --- --- --- --- --- --- --- --- GAT GCC CTT GCT GCC CTG CCA GAC CGA TGC GCA GGT ATT GAG TTT GAT GCC ATC GCT CCC GAC GAG GAA GGA --- GAC ACT TTC TTC TTC AAA --- GGT GGC CAC TTG TGG AAG GGT TAC CAT GGT GCA GCT CAG CTC TCC AAC GAG TCC TTC AAG GAG CTC GAT GAC ATC CAT CAC ATC GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC AAC AAA --- --- GAC AAC CCA GAC GAC CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT AAC CAC ACA CTG GAA GAC GGG TAT CCA AAA GAG ATC CAG GAG GAC TTC CCA GGA GTC CCC ACT CAC CTG GAT GCT GCT GTG GAG TGT CCC AAG GGA GAG TGT AAA GGC GAC TCG GTT CTG TTC TTC AAG GGA CAG GAT GTG CAT TTT TAT GAT ATT GCC ACA AAG ACA GTG AAG ACC AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCT GCC TGT ACC TCT GCC TTA CGC TGG TTG GAG AAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AAG TTC AAC CCG CTA TCT GGA GAG GTG ACT GGT GCC TAC CCA AAG GAT GCC CGC AAT TAC TTC ATG ACG TGC CCG AAC --- TTT GGT --- --- --- CAT GGA GGT GAT TAT AAA GGC CGT AAA TGC AGT GAC GTC AAA CTA GAT GCC ATC ACC AGT GAT GAT GGA GGC AAA TCT TAT CTC TTT GCA GGC CCC ATC TAC ATG CGC CTG GAC AGC CAT CGC GAC GGC TTC CAC GCC TTC CCA ATC GTC AGG AAC TGG AAG GAG GTG GCC AGA GGG GTG GAC GCG ATC TTT TCC TAC ACT GAC AAA ATC TAC TTC ATT AAG GAT GAT CAG GTT TAC ATC TAT AAA GAA GGT GCT CAC TAC ACC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CGT GTG GAT GCT GCC TTC GTC TGC CCC AAT GAA CAC ACA GTT CAT ATA ATC CAA --- GGA AGC AGG ATT CGT GAC GTC GAC CTA ACC GCC ACG CCA AGG GTC GTG ACC CTA GAC CTG CCC TTG CCC TTG TCC GAC ATC GAT GCT GCT CTG TGC GGT GCG GAG GGA ATT AAT CTG TTC AAG GGC TCA GAG TAT TAC AGC TAT GAG AGC ACC AAG ATA CTG TCC ACA GGC AGA ATC GCC CTC AAC CCT CAA AAA ATT ACC TCA GCA ATG ATG GGA TGT CAG GAT 
M_miiuy_2                                  ATG AAG --- CTG CTC ACC AAA ACT CTG CTT CTG TGC ATG GCA CTT GCT CTT GTT CAT GGA GCA CCT AGT CAC CAT GGC GAC GCA GCA CAT CAT GAT GGT --- --- CAT GAT CAT GAC CAT GAC CAT GAC CAT GAC CAT GAC CAT GAC CAT GCT CTG CCA AAC CGC TGC GAT GGT ATT GAG TTT GAT GCC ATC AGT CCT GAT GAA AAA GGA --- GTC ACT TAC TTC TTC AAA --- GGT CCT CAC TTG TGG AAG GGT TTC CAT GGT CCA GCT CAT CCC TCC AAT GAA TCC TTC GAG GAG CTT GAT GAC ATC CAT AAC ATC GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC GAC GCA --- --- GAA AAC CTA GAC GAC CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAC TAT AAC CAC TCT CTG GAA GAG GGG TAT CCA AAA CAG TTG AAC GAG GAC TTC CCA GGA ATC CCT GAT CAT CTG GAT TCT GCT GTT GAG TGT CCC AAA GGA GAA TGT GGG GCC AAC TCA GTT CTG TTC TTC AAG GGA CAT GAT GTT CAT GTT TAT GAC ATT AGC ACA AAG ACA GTA AAG ACA AAG ACA --- --- --- --- --- --- TGG GAC CAC CTG CCT ATC TGC ACC TCT GCT TTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCG GTC ACC GGA GAG GTG AAC GGT ACC TAC CCG AAG GAT GCC CGT GCT TAC TTC ATG AGT TGC CCC AAC --- TTT GGT --- --- --- CAT GGA GGT CAT TAT CAA ATC CCT AAA TGC AGC GAG GTT AAA ATA GAT GCC ATC ACC ATT GAT GAC GCT GGC AAA AGT TAT TTC TTT GCA GGC CCC ATA TAC ATG CGT CTG GAC ATG CAT CGT GAC GGC CGT CAC GCC TTC AAA ATC ACC AAG TCG TGG AAG GAA CTG ACC AGT GGA GTG GAT GCT GTC TTT TCC TAT GCT GAC AAA ATG TAT ATG ATT AAG GAT GAT CAA GTT TAC ATC TAC AAA TCT GGT CCT CAC TAC ACC CTG ATC GAA GGT TAT CCT AAA ACT CTG AAG GAA GAG CTC GGC GTT GAA GGG CAT GTG GAC GCT GCT TTT GTC TGT AAT AGT CAA CAC ACA GTT CAT GTA GTC CAA --- GGA AAA AAG CTC CTT GAT GTC GAC CTA ACT GCC ACA CCC AGG GTC GTG ACC CAA GAA CGG CTT CTA CCT TTG TCC GAC ATT GAT GCT GCA ATG TGC GAT GCA AAG GGA ATT CAT TTG TTC CAA GGC TCG CAC TAT TAC AAC TAT GAG AGT GTC GAA ATA CTA ACT GCG AGC AGA ATC GCC CCT GAG CCT CAC AAT ATT ACA TCA GAA ATG TTA GGA TGT CAG GAT 
M_mizolepis_2                              ATG AAC --- GTT TTC TTT CTG TGT CTC TGT GTG TGT TTG GCT CTT CCT CGT AGC TAT GCA GCT CCA GCG CAC --- CTT GAT GAC ATG ATG GCA GAT GCC --- --- --- CCT AAG GAT CAT TCA CAT CCT AAA GGG GAG GAC CAC CAT GAT GCA CAA CTT GAC CGC TGT AAA GGC ATT GAG TTT GAT GCC ATC ACC CCA GAT GAA AAA GGA --- AGC ACT TTC TTT TTT AAA --- GGT GAC CAT CTC TGG AAT GGT TTT TCT GGC CCA GCT GAA CTC TCC AAT GGC ACA TTC AAG GAA ATG GAT GAA TAT CAT CAC CTG GGT CAC ATT GAT GCA GCT TTC CGC ATG CAC CAT AAG --- --- GAT GAC CCC ACT GCT CAT GAC CAT GTC TTT TTC TTT CTG GAT GAC AAA GTG TTT AGC TAT TAC GAC CAC ACT CTT GAG AAG GGA TAC CCG AAG GAA ATT CAG CAG GAG TTT CCT GAT ATC CCC AAC CAC CTA GAC GCT GCT GTT GAG TGT CCC AAA GGA GAA TGT GTC ACA GAT TCA GTG TTG TTT TTC AAA GGA AAT GAA GTT TAT CAC TTT GAC ATC AAG ACA AAA TTG ACT AAG AAG AAA GTG --- --- --- --- --- --- TGG AGT CAT TTG CCA AAC TGC ACA TCT GCC TTT CGA TGG CTA GAG CAC TAT TAC TGT TTC CAT GGA CAC AGC TTC ACC AGA TTC CAT CCG GTT TCT GGA GAG GTG ACA GGA GAG TAT CCT AAA GAT GCT CGA AAC TAC TTC ATG AGG TGC GGT GAA GGC TTT GGT --- --- --- CAT GGA GCT GGC ACA AGA AAG ATG AAA TGC AGT GAG ATC AAG TTG AAT GCG GCC ACC ATA GAT GAT AAA GGA AGA GAA TAT GCA TTT CAG GGT TCA GTG TAC ATG CGT TTA GAC GAA CAC CGT GAT GGC AAT CAT CCT TTC CCT ATT ACC AGA CAA TGG AAG GAA ATC TCT GGT GAA GTG GAT GCA GTT TTT TCC TAT GGT GAT AAT ATG TAT TTC ATT CAG GGA GAT CAG GTT TAT ATC TAC AAG TCT GCA GCC CAT TAC ACT CTC ATT GAG GGC TAC CCG AAA CCT CTA AAG GAA GAA CTG GGC ATC GAG GGT CCT GTG GAT GCT GCA TTT GTA TGT GGA GAT AAC ACC ATT GTA CAC ATT ATA CAA --- GGT CAA AAG ATG TAT GAC ATC GAT CTT ACA GCA AGC CCC AGA GCC ATT ACT AGA GAG ATG CCC ATT CCC ATT CCT AAA GTT GAT GCG GCC GTC TGT GAT GCT CAT GGG GTA AAG GTG TTC ATT GGT CCA GAG TAC TAT GAC TTT GGC AGC CCA ATG GTA CTA GCT GTA GCC AAG ATG ATC CCT AAT CCT CAT AAG ATT TCC CCA GAA AGG TTT GGC TGT GAA GAA 
O_latipes_2                                ATG GCG --- CTG ACC TTC AAG GCT GCT TTT CTG GCC CTA ATG CTA GCC CTG ACA CGG GCA GCC CCA TTG --- --- GAG GAT TCA GCA GCA GGT GAT GGA --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- GAT TCC GCT TTG CCA GAT CGA GGT GCA GGT ATC GAG TTC GAT GCC ATC ACT CCT GAC GAC AAG GGT --- CAA ACT TTT TTC TTC AAA --- GGA GAT CAT GTT TGG AAG GGC TTT GAG GGT GAC GCT CAA CCA TCC AGT CAG TAT TTT AAG GAG TTA AAC --- --- --- --- --- GGT CAT GTG GAT GCT GCT TTC CGT ATG CAC AAC CCA --- --- GAG AAC CAA GGC GAC CAC GAC CAT ATC TAC CTT TTC CTG GAT GAC AAA GTG TTT AGT TAC TTT GAA CAC ACT CTC GAG GAA GGC TAT CCA AAA GAA ATC CAA GAG GAT TTT CCT GGA GTT CCC GCC CAC CTG GAT GCA GCT GTG GAG TGT CCC AAA GGA GAG TGC GTC ACC GAT TCC GTT TTG TTC TTC AAA GGT CCA GAT GTA CAT GTT TAT GAT ATT GTC ACA AAG ACA GTG AAG ACC AAG ACA --- --- --- --- --- --- TGG CCC CAC CTA CCT GCC TGT ACC TCT GTC TTC CGC TGG TTG GAG CAC TAT TAC TGT TTC CAT GGA CAC AAC TTC ACC CGT TTC CAA CCC GTA ACC GGG GAG GTG ACT GGT AAT TAT CCC AAA GAT GCC CGC AGG TAT TTC ATG CGC TGC CCC GAC --- TTT GGT --- --- --- CAC GGA GGC GAA AGA ACA ACC TTG AAA TGC AGT GAC TTC AAA ATG GAC GCA ATC ACT ACT GAT GAT ACC GGC AGA ATG TAC ATG TTT AAA GGT TCC AAC TAC ATG CGT TTG GAC ACC CAC CGT GAT GGA CTG CAC GCC TTT CCA ATA ACC ACG TCG TGG AAA GAA CTG ACC AAT GGC GTG GAC GCT GTT TTC TCT TAT AAC GAC CGA ATC TAC TTG ATT AAG GGA GAT CAA GTT TAC ATC TAT AAG GCA GGT GCT CAC TTC ACC CTG ATT GAA GGC TAT CCT AAA ACG CTG AAG GAG GAG CTT AAC ATT GAA GGA CAG GTG GAT GCT GCT TTT GTG TGT CCA GGC CAA CGC ACA GCT CAC ATT ATT CAA --- GGA AGG AAG ATT ACC TAC ATC AAC CTC GCT GCC ACG CCC AGG GAA ATC ACC CTC GAC GCT CCT TTG CCT TTT GGC GAC ATA GAT GCT GCT TTC TGC TCT TCA GAC GGC ATT AAA ATT TTC CAA GGG TCG AAC TAC TAC CAC TAT GAT AGC CCG ATG TTA CTG GTT ATG AGC AGG ATT GCC CCC ATA CCT CTG AAG GTC ACA TCG GCG ATG GTG GGC TGT GAA GAT 
O_mykiss_2                                 ATG --- --- CTT CTC TCC CAA ACA CTC TGC CTG TGC TTG GCA CTA GCA CTC AGC TAT GCT GCT CCA ACG ATC --- CAT GAT GTA ATG ATG GCA GAC CAT --- --- --- --- --- GAC CAC AAC CAC CAC GAG GAT CAG GCC CAC CAC AAA GCC AAC CCA GAC CGG TGT GAC GGC ATC GAG TTT GAC GCC ATC GTC CCC GAC GAG AAC GGA --- CAC ACC TTC TTC TTC AAG --- GGG GAT CAC CTG TGG AAC GGC TTC AAG GGT CCA GCT CAG GTC TCC AGT GCC TTC TTC AAG GAG CTA GAT AAC TAC CAT CAC CTG GGG CAT GTT GAC GCT GCC TTC CGC ATG CAC AAC AAA --- --- GAA AAA CCT GAA AAA CAT GAT CAC ATC TAC TTT TTC CTG GAC GAC AAG GTT TTC AGC TAC TAT AAC CAC AGT CTG GAG GAG GGC TAC CCC AAG GAC ATC CAG CTG GAC TTC CCA GGG GTG CCC AGC CAC GTG GAC GCT GCG GTG GAG TGC CCC AAG GGR GAG TGT AAC TCA GAC TCT GTC CTA TTC TTC AAG GGA GAA GAA GTG TAC AAC TAT GAC ATC GCC ACG CAG TCA GTA AAG GAG AAA CAG --- --- --- --- --- --- TGG GCC CAC CTG CCC AAC TGT ACG TCT GCC TTC CGT TGG CTA GAG CAA TAC TAC TGT TTC CAT GGT CAC AAC TTC ACC CGG TTC CAC CCT GTA TCT GGG GAG GTG AAT GGA GTG TAC CCT AAG GAC TCC AGG CAC TAC TTC ATG AGT TGC CCC AAT --- TTC GGC --- --- --- CAT GGC GGT GAG GCA AAT GTT CCC AAA TGC AGT GAA GTG ACA TTG GAT GCC ATC ACC TCA GAC GAC TCA GGC AAA ACC TAT GCC TTC ACT GGT CAT AAT TAT ATG CGT CTA GAC ACC CAT CGT GAT GGT AAA CAT ACC TTC CCC ATT GCC AGA ACC TGG AAG GAA GTG ACC AAC GGC GTG GAC GCA GTC TTC TCC TAC AGT GAC AAG ATC TAC ATT ATC AAG GGC GAC CAA GTT TAC ATC TAC AAA TCA GCA GCT CCC TCC ACT CTG ATT GAG GGC TAC CCT AAA AGC CTG AAT GCG GAG CTG GGC ATC GAA GGG CCT GTG AAC GCA GCC TTT GTT TGT GCA GAT CAC CAT ATT GTG CAC ATT ATT CAA --- GGA CAG AAG ATG CTG GAC ATT GAC CTA TCT GCC ACC CCT AGG GTA GTA GCC AGT GAG GCC CCA CTG CCC ATC TCC GGC ATC GAG GCA GGC ATG TGT GGC CGT GAT GGA GTC AAA GTG TAT GTG GGC TCT GAG TAC TAC CAC TAC GAG ACA CCC AGG CTC CTG GCT TTC AGC AAG ATG CTC CAA GAG CCT AAA ACA ATC ACC CCA GAC ATG ATG CGC TGT GTC GAA 
O_niloticus_2                              ATG GAG --- CTG ATC ACC AGA ACT CTG CTT CTG GGT CTG GCA CTT TCC CTC ACT AAT GCA GCA CCT GCG CAT --- CAA GAC GAG CCA GCA CCA AAA GCT GGA TCT CAA TCA CAG CAG CAT TCT GTA CTT GGG AAT AAA GAT GGA GAT GCT GCT CTA CCA GAC CGG TGT GAA GGA ATT GAG TTT GAT GCC ATC ACT CTT GAT GAG AGT GGA AAA AAC CCC TTC TTT TTC AAA --- GAT GGC TAC CTG TGG AAT GGT TTC TAT GGT CCA GCT AAA CCC TCA ACG ATG TTC TTC AAG GAG CTA GAT GAA CAC CAC CAC CTC GGC CAT GTC GAT GCT GCT TTT CGG ATG --- --- --- --- --- --- --- --- --- --- CAC GAT CAC ATC TTC CTC TTC CTG GAT GAC CAC GTG TTC AGC TAT TAC AAC CAC ACT CTG GAG ACC GGA TAT CCA AAA ACT ATC CAG GAA GTT TTT CGT GGA GTC CCC ACA CAT CTA GAT GCT GCT GTG GAG TGT CCT CAA GGA GAG TGC ATT ACC GAC TCT GTT CTG TTC TTC AAA GGG CAA GAT GTG TAT GTT TAT GAT ATA GTC ACA AAG ACA GTG AAG ACC AAG ACG CGG GCC CGC CTG TCT CCC TGG GCC CGC CTG CCT CTC TGC ACG TCT GCT TTC CGC TGG GTG GAA CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCA ATA TCA GGA GTA GTT AAC GGC ACG TAC CCA AAG GAT GCC CGC AAT TAC TTC ATG AAC TGC AAA AAC --- TTT GGT --- --- --- CAC GGA GGT GAT CAC AAG GCT CCT AAA TGC AGT GAA GTC AAA CTA GAT GCC ATT ACT ACA GAT GAC AGA GGC AGA ATT TAT TTA TTT ACA GGG CTT AAC TAC ATG CGT GTG GAC AAC AGG CGT AAC GGC CTT CAC GCC TTT CCA ATA ACC AGG GGA TGG AAA GAA GTG ACA AAC GGG GTG GAT GCC GTT TTC TCC TAC ACC GAC AAA ATG TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAT AAA ACT GAT GCC CAC TAC GTC CTG ATT GAA GGC TAC CCT AAA TCC CTC AGG GAG GAA TTG GGC ATT GAA GGA ACG GTG GAT GCC GCT TTC CTC TGT CCC AAT GAA CAC ACA GTT CAT ATA CTC CAA GAA GGA CAC AGG ATT CGT GAT GTT GAC CTC AGT GCC ACA CCC AGG GTC ATC AAC CGA GAA ATA CCT TTG CCC TTG CCT GAC ATT GAT GCT GGT CTC TGT GGT CCA GAT GGC ATT AAA GTG TTC AAG GGG TCA CAG TAT TAC CTC TAT GAG AGT CCC ATG GTA TTG GCT ACA AGC AAG ATC GCT CCT GTT CCT CAA AAC ATC ACG TCA GGA ATG ATG GGG TGT GAG GAT 
P_altivelis_2                              ATG AAG --- CTG CTC TTT CGG ACA CTG TGG CTG TGT TTG GCA CTG GGG TTC ACC AGC GCT GCT CCC TCG TAC --- CAT GAC AGA ATG ATG GCA GAT CCG --- --- --- --- --- --- --- --- --- CCC CAG GAA GAC GCT CAT CAC GCT GCC AAG CTA AAC CGG TGT GAT GGC ATC GAG TTT GAC GCC ATC GCC CCT GAT GAG AAA GGA --- AAC ACT TTC TTC TTT AAA --- GGT GAC CAC CTG TGG AAG GGC TTC CAC GGA CCA GCT CAG CTC TCT AAC GAG ACC TTC AAG GAG CTG GAT GAC CAT CAT CAC CTG GGA CAC ATA GAC GCT GCC TTC CGC ATG CAC AAC AAG --- --- GAG AAC CTC AAG GAC CAC GAT CAT ATC TAC TTC TTC TTG GAT GAT AAA GTA TTC AGC TAC TAT AAC CAG ACT CTG GAG GAG GGC TAT CCA AAA GAC ATC CAG GCA GAC TTC CCA GGT GTC CCC AGA GAC CTG GAC GCC GCT GTA GAG TGT CCA CAG GGA GAA TGT ATC TCA GAC TCG GTC CTG TTC TTC AAA GGA GAT ACG GTG TAC AGT TAC GAC ATC CCG ACC AAG ACA GTC AAA GAG AAA GCG --- --- --- --- --- --- TGG CCT CAC CTA CCC TCC TGC ACC TCC GCC TTC CGT TGG CTG GAA CAT TAC TAC TGT TTC CGA GGA AAC GAG TTC ACC AGG TTC CAC CCT GTT ACC GGG GCT GTG GAA GGA GAT TAC CCC AAG GAT GCA AGA GCT TAC TTT ATG AGG TGC CCT AAC --- TTC GGA --- --- --- CAT GGG GGA AGG TCA ATG GTT CCC AAA TGC AGT GAG ATC AGC CTG AAC GCC ATT ACA ACC GAC AGC GCC GGT AAA ACC TAC GCC TTC AGA GGT TCG CAC TAC ATG CGT CTG GAC ACG CAC CGT GAC GGC AAA CAT GCC TTC CCT ATC ACC AGG TCC TGG AAG GAC ATT CCT GGG GCT GTG GAC GCT GTC TTC AGC CAC AAA GAC AGG ATG TAC ATG ATC GCG GGG GAT CAA GTC TAC ATT TAC AAA TCG GCT GCC CAC TAC ACT CTC ATT GAG GGC TAC CCC AAA TCC CTG AAG GAG GAG ATG GGC ATT GAT GGC ACT GTG GAC GCA GCT CTT CTG TGT GGT GAC GAA AAT ACA GTG CAC TTT ATT CAA --- GGC CAG AAG ATG CTT GAC GTC GAC CTG TCT GCC ACC CCC AGG ACC GTG ACG AGT GAC GCT CCC CTG CCT ATT GCG GGG ATC AAT GCC GCC ATG TGT GGT CCG AAT GGG GTC AGA GTG TTT GTG GGG TCG GAG TAC TAC GAC TAT GAA ACC CCA AGG CTG CTG GCG TTC AGC AGG ATC AGG GTC CGG CCC CAA CAA ATT ACC TCC AAG ATG TTC GAC TGT GAG GAC 
P_flavescens_2                             --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- GAC TGT --- --- --- --- --- --- --- --- --- --- --- --- GAC AGA CCA GAT GCT GCT CTT CCA GAC CGG TGT GCA GGT ATT GAG TTT GAT GCC ATT ACT CCT GAT GAG AAA GGA --- AAC ATG TTA TTC TTC AAA --- GGT AGC CAC TTG TGG CCG GGT TTC CGT GGT CCA GCT CAG CCC TCC AAT GAG TCC TTC AAG GAG CTT GAT GAC ATG SAT AAC ATC GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC AAC ACA --- --- GAG AAC CCA GAC GAT CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAA GTG TTC AGC TAT TAC AAC CAT ACC CTG GAG GAC GGG TAT CCA AAA GAG ATC CAG GAG GAC TTC CCA GGG GTC CCC ACT CAT CTG GAT GCT GCT GTG GAG TGT CCC AAA GGA GAA TGC ATR GCT GAC TCA GTT CTA TKC TTT AAG GGA AAT GAT GTG CAC GTT TAT GAT ATT ACC ACA AAG ACA GTG AAG ACC AAG ACA --- --- --- --- --- --- TGG TCC CAC CTG CCT GTC TGC ACC TCT GCT ACA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC CAC CCG GTA TCC GGA CAG GTG AGC GGT GAC TAC CCC AAG GAC GCC CGC AGG TAC TTC ATG ACG TGC CCC AAC --- TTT GGT --- --- --- CAT GGA GGT CAT TAT AAA GTC CTG AAA TGC AGT GAG GTC AAA ATA GAT GCC ATC ACC ACT GAT GAT ACA GGA AAA ATG TAT ATC TTT GCA GGC CCC WTC TAC ATG CGT CTG GAC ACC AGT CGT GAC GGA CTT CAC GCC TTT CCA ATC ACC AGG GCG TGG AAG GAG GTG ACC GGC GGA GTG GAT GCT GTT TTT TCC TAC ACT AAC AAA ATC TAC TTG ATT AAG GGT GAT CAG ATT TAC ATC TAT AAA ACA GCT GCT CAC TAC ACC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAG CTA GGC ATT GAA GGA CAT GTG GAC GCT GCT TTT CTC TGT CCC AAT GAA CAT ACA GTT CAT GTA ATC CAA --- GGA CAG AAA TTG CGC GCC GTT GAC CTT ACC GCC TCA CCC AGG GCC GTG ACC CAG GTT CTG CCC ATG TCC TTG TCC GAC ATC GAT GCA GCT GTG TGC GGT GAA GAA GGA ATT AAA GTG TTT AAG GGC TCA CAG TTC TAC AAC TAT GAA AGC CCC AGG TTA CTG GCT TTG AGC AGA ATC GCC CCT GTG CCT CAA AAT ATT ACC AAA GCA ATG ATG GGA TGT GAG GAA 
P_promelas_2                               ATG ACA --- GCG GTG TGT CTT TTC CTG TGT GTA TCC TTG GCT CTA ACT CTG AGC AAT GCC GCT CCA GCC CAC --- CAT GAT GTC ATG ATG AAA GAT GCT --- --- --- --- --- --- --- --- --- --- --- --- CCT GAG CTC CAT GAT GCC AAA CCT GAC CGG TGT ACT GGC ATT GAG TTT GAT GCC ATC ACT CCT GAC GAA AAA GGA --- GAC ACT TTC TTT TTC AAA --- GGT GAC CAT TTA TGG AAA GGT TTC TCC GGA TCA GCT GAG CTC TCA AGC AGC TTC TTC AAA GAA CTG GCT GAC CAT CAT GAC CTG GGT CAT GTC GAT GCA GCC TTC CGC ATG CAC CAT CAA --- --- GAT GAT GCC AGT GTT CAT GAC CAT GTC TAC TTC TTT CTG GAT GAC AAA GTC TTT AGC TTT TAC AAC TAC ACC CTT GAG AAA GGC TAC CCT GTG GAG ATC CAG CAG GAG TTT CCT GGT GTC CCC AGC CAC TTA GAT GCT GCG GTC GAG TGT CCC AAA GGA GAA TGC ATC ACT GAT TCA GTG CTG TTC TTC AAA GGA AAT GAA ACT TAC AGC TAT GAC ATC AAG ACA AAG ACA GTT AAG AAG AAG ATG --- --- --- --- --- --- TGG ACA CAC TTG CCA ACC TGT ACA TCT GCC TTT CGC TGG CTA GAG CAC TAT TAC TGT TTC CAT GGG AAC AAC TTC ACC AGA TTT CAT CCT GTT TCT GGG GAG GTC ACG GGA ACA TAT CCT AAG GAT GCC CGA CAC TAC TTC ATG AGG TGC GGT GCC GGA TTT GGT --- --- --- CAT GGA GGT GAT GCA AGA AGG CTA CGC TGC AGT GAT GTC AAG CTG CAT GCT ATC ACC ACA GAT GAT AAA GGG AGA ACA TAT GCA TTC CAT GAT GCA GTG TAC TTG CGT TTG GAC TCA CAC CGA GAT GGC ATT CAC CGT TTC CCT ATT TCA AGG TCA TGG AAG GAA ATC TCT GGT GGA GTG GAT GCA GTT TTT TCT TAT GGT GAT ACT ATG TAC ATC ATC CAG AGT GAT CAA GTC TAT ATC TAC AAG TCA GCA GCC CAT TAT ACT CTC ATA GAG GGC TAC CCC AAA CCT CTG AAG GAA GAA CTA GGC ATC GAT GGC CCT GTG GAT GCA GCA TTT TTG TGT CCA AAA CAG GAC ACT GTA TTC TTT ATA CAA --- GGT CAA AAT ATG CGT GCA GTT GAT CTT GCG GCC ACA CCC CGA GTT GTT AAA AAG GAG ACA CCT ATT CCC TTC CCT AAA ATT GAT GCT GGC TTC TGT GAT GCT GAT GGT GTG AAG GTG TTT ATT GGA CCA GAA TAC TAT TCA TAT GAA AGC CCA ATG ATT CTA GCT ATG AGC AGG ATT AGA CCT CAA CCT CAA AAG ATC TCT CCA GAA AAA TTT GGC TGT GAA GAC 
R_rutilus_2                                ATG ACA --- GCG CTG TTT CTT TCC CTG TGT GTA TGC TTG GCT CTA GCT CTG AGC AAC GCC GCT CCA GCG CAC --- CAT GAT GTC ATG ATA AAA GAT GCC --- --- --- --- --- CCT GAG GAA CAT CCT AAA GGG GAG GAG CAC CAT GAT GCC CAA CCT GAC CGG TGT AAA GGC ATT GAG TTT GAT GCC ATC ACT CCC GAT GAA AAA GGA --- AAC ACT TTC TTT TTC AAA --- GGT GAC CAT TTA TGG AAA GGT TTC TTT GGA TCA GCT GAG CTC TCA CGC AGC ATC TTC AAA GAA CTG GAC GAC TAT CAT CAC CTG GGT CAT GTT GAT GCA GCC TTC CGC ATG CAC CAT CAA --- --- GAT GAT GCC AGT GTT CAT GAC CAC ATC TAC TTT TTT CTG GAT GAC AAA GTC TTC AGC TTT TAC AAC CAC ACC CTT GAG AAA GGC TAC CCT GTG GAG ATA CAG CAG GAG TTT CCT GGT ATC CCC AGC CAC TTA GAT GCT GCT GTT GAG TGT CCC AAA GGA GAA TGC ATT ACT GAT TCA GTG CTG TTC TTC AAA GGA AAC GAA ACT TAC AGC TAT GAC ATC AAG ACA AAG ACA GTT AAG AAG AAG ATG --- --- --- --- --- --- TGG ACA CAC TTG CCA AAC TGC ACA TCT GCC TTT CGC TGG TTA GAG CAC TAT TAC TGT TTC CAT GGT CAC AAC TTC ACT AGA TTC CAT CCT GTT TCT GGG GAG GTG ACA GGA ACA TAT CCT AAG GAT GCC CGA AAC TAC TTC ATG AGG TGC GGT GGA GGA TTT GGT --- --- --- CAT GGA GGY GGT GCA ACA AGG CTA CGC TGC AGT GAG GTC AAG CTG CAT GCT ATC ACC ACA GAT GAT AAA GGG AGA TCA TAT GCA TTC CAT GAT GCA ACG TAC TTG CGT TTG GAC ACA CAC CGA GAT GGC AGT CAC CAT TTC CCT ATT TCA AGG TTA TGG AAG GAA ATC TCT GGT GGA GTG GAT GCT GTT TTT TCT TAT GGT GAT AAT ATG TAC ATC ATC CAG GGT GGT CAA GTC TAT ATC TAC AAR TCG GCA GTC CAT TTT ACT CTC ATA GAG GGC TAC CCT AAA CCT CTG AAG GAA GAA CTA GGC ATC GAT GGT CCT GTG GAT GCA GCA TTT TTG TGT CCA AAA CAG CAC ACT CTA CAC TTT ATA CAA --- GGT CAA AAG ATG TAT GAA GTT GAT CTT TCG GCC ACA CCC CGA GTT GTT AAA AAG GAG ATG CCT ATT CCC TTC CCT AAA ATT GAT GCC GGC TTC TGT GAT GCT GAT GGT GTG AAG GTG TTT ATT GGG GCA AAA TAC TAT TCA TAT GGA AGC CCA ATG ATT CTA GCT CTG G-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 
S_schlegelii_2                             --- --- --- --- --- NCC AAA ACC CTG TTC CTG TGC TTA GCA CTG ACC CTC GCC AAC GGA CAC CAC GAG CAT GGA CAT AAT GAT GCA CCT CAC GAT GCA --- --- --- --- --- --- --- --- --- --- --- GCA CAC GAT CAT GAT CAT GCT CTA CCA GAC CGC TGT GAT GGT GTT GAG TTT GAT GCC ATC ACT CCT GAT GAG AAA GGA --- AAC ATT TTC TAC TTC CAA --- GGA AAC CAC TTG TGG ATG GGT TTC CAC GGG GCA GCT CAA CTT TCC AAT GAG TCC TTC GAG GAG CTA GAT GAC ATC CAT CAC ATC GGT CAT GTT GAC GCT GCC TTC CGC ATG CAC AAC GAA --- --- GAG AAC GTA GAC GAC CAC GAC CAC ATC TAT TTC TTC CTG GAT GAC CAT GTG TTC AGC TAC TAT AAC CAC ACT CTG GAG GCC GGG TAT CCC AAA GAC ATC ACG GAG GAT TTC CCA GGA ATC CCC TCT CAC CTG GAT GCT GCT GTG GAG TGT CCC AAA GGA GAG TGC GCG GCC GAC TCA GTT CTG TTC TTC AAG GGA AAT GAT GTG CAC GTT TTT GAT ATT ACC ACA AAG TCG GTG AAG ACA AAG ACG --- --- --- --- --- --- TGG TCC CAC CTG CCC AAC TGC ACC TCT GCC CTA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA AAC AAC TTC ACC AGG TTC CAT CCG GTG ACC GGA GAG GTG TCC GGG ACC TAC CCC AAG GAC GCC CGG GAT TAC TTC ATG AAG TGC GCC GAC --- CAT GGT --- --- --- CAT GGA GGT GAA CGT AAG GTC ATG AAA TGC AGC GAC GTC AAA TTG GAT GCC ATC ACC TCT GAT GAT GCC GGC AAA ACT TAC TTC TTT GCA GGC TCC ATC TAC ATG CGT CTG GAC ACC CAT CGT GAC GGC CTT CAC GCA TTC AAA ATC AAC AGG ACG TGG ACG GCG GTG GAC GAC GGG GTG GAT GCT GTC TTT TCC TAC TCT GAC AAA ATC TAC ATG ATT AAG GAT GAT AAC GTT TAC ATC TAT AAA TCA ACT GCT CAC TAC GTC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAA CTC GGC ATT GAA GGA CAT GTG GAC GCT GCT TTC GTC TGT CCT GAT AGC GAC ATA GTT CAT GTA ATC CAA --- GGA AAC AAG CTT TAT GAT GTC GAC CTT ACT GCC ACA CCC AGG AAC GTG ACC CAA GAG TTT CCC TCG CCC CTG GAC GAC ATC GAT GCT GCG ATG TGC AAC GCG AAT GGA ATT AAT GTG TAC AAG GGT TCG AAT TAT TAC CAC TAT GAC AGC CTC ATG TTA CTG ACT TTC AGC AGA ATC GCC CCT GTG CCT ACC ATT GTT ACC AAC GCA ATG TGG GGG TGC GAG GAT 
T_nigroviridis_2                           ATG GAA --- CTC CTC AGC AAG ACT CTG CTC CTG TGC TGG CTC CTC GTC CTG GGC CGG GCA GCG CCC GCA CCC --- CAA GAT GCA GCA GAA AAG GAC AAC --- --- --- --- --- --- GTC TCT GAA ATG AGA GAT GAG GAT TCC GGC CCT GCT CTG CCG GAC CGA TGC GCA GGA ATC GAG TTT GAT GCC ATC ACT CCT GAC GAA AAA GGA --- AAG ACT TTC TTC TTC AAA --- GGT GCC TAC ATG TGG AAG GGT TTC CAA GGA CCG GCG CAG CTC GTC AGC GAG TCC TTC AAG GAA ATC GAC GAC ATT CCC AAC ATC GGT CAC ATA GAC GCG GCC TTC CGC ATG CAC AAC AGC --- --- GCC AAT CCG GAT GAC CAC GAC CGC ATC TAC TTC TTT TTG GAG GAC AAG GTG TTC AGT TAC TAT GAC CAC GTC CTG GAA GAC GGC TAT CCA AAA CAC ATC AGT GAG GAG TTT CCT GGT GTT TCC ACA CAC CTG GAT GCA GCC GTG GAG TGC CCC AAA GGA GAG TGC ATG GCT GAT TCA GTC TTG TTT TTC AAA GGA CAA GAG GTT TCT GTG TAT GAT CTG AGC ACC AAA ACG GTG AAG ACC AAG ACA --- --- --- --- --- --- TGG TCC CAC CTG CCT GCC TGC ACC TCT GCT CTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACT CGA TTC CAC CCC GTA TCC GGA GAG GTG AAC GGG ACC TAC CCG AAG GAC GCC AGG CAT TAC TTC ATG AGG TGT CCC AAC --- TTC GGA --- --- --- CAC GGA GCT GGC TAC CAA CCC CCC GAA TGC AGT AAC GTC AAA TTA GAC GCC ATC ACG GCT GAT GAT GCG GGG AAA ATG TAT GCC TTT GCA GGG CCC ATC TAC ATG CGC CTG GAC ACC CGG CGC GAC GGC ATC CAC GCC TTC CCC ATC ACC CGT TTG TGG AAG GAG GTG GTT GGA AGG GTG GAC GCG GTG TTT TCC TAC ACT GAC AAA ATG TAC CTA ATC AAG GGA ACA CAG GTT TAC ATC TAC AAA GGA GGC GCT CAC TAC ACG CTG ATT GAA GGC TAC CCT AAA ACC CTG AAA GAG GAG CTG GGG CTG GAG GGT CCT GTG GAC GCT GCC TTT GTG TGT CCA GAT CAA CAC CTG GTT CAC ATC ATT CAG --- GGA AAC CGA ATT CTT GAC GTT TCC CTG ACT GAC ACA CCC AGG ATC GTT ACC CGA AAC CTG CCC TTC GCC TTG ACC GGC ATC GAT GCG GCC TAC TGC GAC TCA GAG GGC GTT AAG CTG TTC ATC GGC TCC AAG TAT TAC CAC TAC CAG AGT GTC ACG GTG ATG GTT TTG GGC AAA ATT GCC GCC ATT GCA AAA CCG ATA ACC TCA GAA ATG ATG GGC TGT CGA GAT 
T_rubripes_2                               ATG GAC --- CTC TTC AGC AAG ACT CTG CTC CTC TGT TTG CTC CTC ATC CTT ACT GAT GCA GCA CCT GCG CCC --- CAA GAT GCA GCA GAG AAA GAC AAC --- --- --- --- --- --- ATT TCT GAA GTG AAA GAA GAA GAT TCC GGT CCT GCT CTG CCA GAC CGG TGT GCA GGA ATT GAG TTT GAC GCC ATC ACT CCT GAC GAA AAA GGA --- AAG ACT TTG TTC TTC AAA --- GGT GCC TAC ATG TGG AAG GAT TTT CAT GGA CCA GCA CAG CTT GTC AGC GAG TCC TTC AAG GAA ATT GAC GAC ATT CCC AAC GCT GGC AGC ATC AGT GCT GCC TTC CGA ATG CAC AAC AAA --- --- GCC AAT CCA GAT GAC CAT GAC CGC ATT TAC CTC TTC CTG GAA GAC AAG GTG TTC AGC TAT TAT GAA CAA GTC CTG GAA GAA GGC TAT CCA AAA CAT ATC AAT GAG GAA TTC CCT GGT GTT CCC ACA CAC CTG GAC GCA GCA GTG GAG TGC CCC AAA GGA GAG TGT ATG GCT GAT TCT GTT TTA TTT TTC AAG GGA CAG GAT GTT CAC ATG TAT GAT CTG AGC ACC AAG ACA GTG AAG ACC AAG ACA --- --- --- --- --- --- TGG TCC CAC CTG CCT GCT TGC ACC TCT GCT TTT CGC TGG CTG GAG CAC TAT TAC TGC TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCA ATA TCT GGA GAG GTG AAC GGA ACT TAT CCA AAA GAT GCC CGG CAT TAC TTT ATG AGG TGT CCC AAC --- TTT GGA CTC GCA GGA CAC GGA GGT GGC TAT AAC ATC CCT AAA TGC AGT GAA GTT AAA ATA GAT GCC ATC ACG GTT GAT GAA GCA GGA AGA ATG TAT GCC TTT GCA GGA CCC ATC TAC ATG CGC CTT GAC ACT CGC CGG GAT GGT TTT CAT GCC TTC CCG ATC ACT CGG CAG TGG AAG GAG GTG GTT GGA AAA GTG GAC GCG GTA TTT TCC TAC GGC GAC AAG ATG TAC CTA ATC AAG GGT AAA CAG GTT TAC ATC TAC AAA GGC GGT GCT CAC TAC ACC CTG GTT GAA GGC TAT CCT AAG ACC CTG GAA GAG GAG CTT GGG GTC GAA GGA CCT GTG GAT GCT GCT TTC GTG TGT CCG GGC CAG CAC ACG GTT CAT ATC ATT CAA --- GGA GAA CGA TTT CTT GAT GTT TCA TTA ACG GCC ACA CCC AGG GTT GTT GCC CGA AAC CTG CCC TTC GTT CTG TCC GAC ATT GAT GCA GCC TAC TGT GAT GCA AAG GGA GTC AAG TTA TTC AGC GGC TCC AAG TAT TAT CAA TAT GCC AGC GTC ACA ATA CTG GCT TTG AGC AAA ATT GCT GCT CTT GCA GAA CCT ATA ACC TCA GAA ATG CTG GGA TGC CAA GAT 
X_hellerii_2                               ATG GAG CCG GTG ATC ACC AGA ACT CTG ATT CTG TTG GTG CTG GTC ACC ATC TCC ACA GCA GCA CCG CTA --- --- CAA GAT GCA GCA GTA GAA GAT GGA --- --- --- --- --- --- --- --- --- --- --- --- --- GGC ACT AGC CCT GCC GCT CCA GAC AGA TGT GGC GGT GTT GAA TTC GAC GCC ATT GCT CCT AAT GAA AAA GGA --- AAC ACT CTC TTC TTC AAA --- GGT GAT CAC GTG TGG AAT GGC TTC ACT GGT CCA GCT CAG CTC TCC AGT TTG CAC TTT AAG GAA CTG AGT --- --- --- --- --- GGT CCT ATT AAT GCC GCT TTC CGC ATG CAC AAC ACC --- --- GAA AAC CCC AAC GAC CAC GAT CAC ATC TAC CTT TTC CAG GAT GAT AAA GTG TAC AGT TAC TTT AAC CAA ACT CTG GAG GAA GGG TAT CCA AAA CAA ATC CAA GAG GAT TTT CCT GGA GTT CCC ACT CAC CTG GAC GCT GCA GTG GAG TGT CCC AAA GGA GAG TGC ATG GCT GAT TCG GTT CTG TTC TTT AAA GGC CAG GAT GTG CAT GTT TAT GAT ATT GCC ACA AAA GCA GTG AAG ACC AAG ACA --- --- --- --- --- --- TGG TCC CAC CTG CCG TCC TGC ACG TCT GCT TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAC GGA CAG AAC TTC ACC CGC TTC CAC CCC GTC TCA GGA GAG GTG ACC GGC GCC TAC CCC AAA GAC GCC CGG CAT TAC TTC ATG AAC TGC CCC AAC --- TTC GGT --- --- --- CAC GGA GGA GAT CGG AAA CCT CTT AAA TGC AGC AAC ATC AAA CTG AAT GCA GCC ACC ACA GAC GAT GGA GGC AGG ACG TAT TTC TTT GCA GGT CCG ATC TAC ATT CGG GTT GAC ACA CAC CGT GAC GGA TTT CAT GCC TTC CCA ATA ACC AGA GCG TGG AAG GAG GCG AAC GAT GGA GTT GAT GCC GTT TTC TCT TAC GAC AGC AAA ATG TAC TTG ATT AAG GGC GAT CAG GTT TAC ATC TAC AAA GCA GAC GCT CAC TTC ACC TTG ATT GAA GGC TAC CCT AAA ACT GTC AAG GAG GAG CTG GGC ATT GAG GGA ACT GTG GAT GCT GCA TTT GTA TGC CCA ACT GAA AAC ATA GCT CAC ATA ATT CAA --- GGG AAC AGT ATG CGT GAC GTT GAC CTC ACC GCC ACA CCC AGG GTT ATT AGC CGA GAA TTC CCA TTG CCG TTG TCT GAT ATA GAC GCC GGT CTG TGC GGT GAT GAC GGG ATA AGG TTA TTT AAA GGC TCG CAG TTT TAC TAC TAT GAA AGC CCC AGG ATA CTG GCG ATG GGC AGG ATC GCA CCA GTG GCC TCG GAC ATC ACC TCA GCG CTG ATG GGA TGT GAG GAT 



After deleting gaps. 1074 sites
     21   1074

D_rerio_2                                  GAT GCC CAC CAT GAA GAC CGA TGT AAA GGT ATT GAA TTT GAT GCC ATC GCT CCA GAC GAG AAA GGA AAC ACT TTC TTT TTC AAA GGT GAC CGT TTG TGG AAG GGT TTA ACT GGA GCA TCT GTG CTC TCG AGC AGT GTA TTC ACA GAG CTG GAT GGT CAC GTT GAT GCA GCT TTC CGC ATG CAT GAC CAC ATC TAC TTC TTT CTG GAT GAT AAA GTC TTC AGC TAC TAC TAC ACA CTT GAA AAA GGC TAC CCA ATG GAG ATC CAG CAG GAG TTT CCT GGC GTC CCC AGC CAT CTA GAT GCT GCT GTC GAG TGT CCC AAA GAA TGC ACG GAT TCG GTG CTC TTC AAA GGA AAT GAA GCC TAT AGT TTC GAC ATC AAG ACA AAG TCG GTT AAG AAG AAG GTG TGG ACA CAT TTA CCA AAC TGC ACT TCT GCT TTC CGC TGG CTC GAG CAC TAC TAT TGC TTT CAT GGT CAC AAC TTC ACC AGA TTT CAT CCA GTT ACT GGG GAG GTC ACG GGA AAT TAT CCT AAA GAT GCA CGA AAC TAC TTC ATG AGG TGT GAA TTC GGT CAT GGA GGT GCA AGA AAA CTG CGC TGC AAG CTG GAT GCC ATC AGC GCT GAT GAG AGA GGC AGA ATG TAT GCG TTC CAG GAT GTG TAC GTG AGA TTG GAC ACA CAC CGA GAT GGC AGT CAC CAT TTC CCC ATT TCC AGG TTA TGG AAG GAA ATC TCC GGT CGA GTG GAT GCT GCG TTT GCT TAT GGA GAA AAT ATG TAC ATC ATT CAG GGT GAT CAG GTC TAC ATC TAT TCT GCA GTC CAT TAT ACC CTG ATT GAG GGC TAT CCA AAA CCT CTG AAG GAA GAG CTG GGC ATT GAT GGT CCT GTG AAC GCA GCA TTT CTC TGC CAA CAA CAC ACT GTT CAC ATT ATA AAA GAT CAA AAG ATG TAT GAT GTT GAC CTT GTG GCC ACC CCC CGA ACT GCT CAA ACG GTG AGG CTT ATT CCC TTC GCT GAC ACT GAT GCT GGC TTT TGT GAT GCT GAA GGC CTG AAG GTG TTC ATC GGC CCA GAA TAT TAC TCC TAT GCA AAC CCA ACG CTT CTA GCC ATG 
D_labrax_2                                 GAT GCT GCT CTG CCA GAC CGG TGT GAA GGC ATT GAG TTT GAT GCC ATC ACT CCT GAC GAG AAA GGA ACC ACT TTC TTC TTC AAA GGT CCC CAC TTG TGG AAG GGT TAT CAT GGT TCG GCT CAG CCT TCC AAT GAG CAC TTC AAG GAG CTC GAT GGC CAC GTT GAT GCT GCC TTC CGC ATG CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT CAC ACC CTG GAA GAC GGG TAT CCT AAA CAG ATC CAA GAT GAC TTC CCA GGA GTC CCC ACT CAT CTG GAT TCT GCT GTG GAG TGC CCC AAA GAA TGC GCT GAC TCA GTT TTG TTC AAG GGA CAT GAT GTC CAT CTT TAT GAT ATT ACC ACA AAG ACA GTG AAG ACC AAG ACG TGG TCC CAC CTG CCC GTC TGC ACC TCT GCT TTA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCG GTA TCC GGA GAG GTG AAC GGT ACC TAC CCA AAG GAC GCC CGC AAT TAC TTC ATG GGG TGC GAC TTT GGT CAT GGA GGT TAT CGA CCC CGT AAA TGC AAA ATA GAT GCC ATC ACC ACT GAC GAT GCT GGC AAA ACT TAT TTC TTT GCA GGC CCC TAC ATG CGT CTG GAC ACC CAT CGA GAC GGC CTT CAC GCC TTC CCG ATC ACC AGG GCG TGG AAG GAG GTG ACC AAT GGA GTG GAC GCT GTC TTT TCC TAC ACT GAC AAA ATC TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAT GCA GCG GCT CAC TAC ACC CTG ATC GAA GGT TAC CCT AAG ACT GTG AAG GAG GAG CTG GGC GTT GAA GGA CGC GTG GAC GCT GCT TTT GTG TGT GAT GAC AAC ACA GTT CAT ATA ATC CAA GGA CAG AGG ATT CTT TAT GTT GAC CTG ACC GCC ACG CCC AGG GCT GTG ACC CAA AAT CTG CCC TTG CCC TTG GAC GGC ATC GAC GCT GCT CTG TGC AAC GCA AAG GGA ATT GAC TTG TTC AAG GGC CCC CAG TAT TAC CAC TAT GAG AGC CCC ATG ATA CTG GCT ATG 
D_mawsoni_2                                GAT GCT TCT CTA CCA GAC CGG TGT GAT GGG ATT GGG TTT GAT GCC ATT ACT CCT GAC GAG CAA GGA ACC ACT TTC TTC TTC AGA GGT AGC CAC TTG TGG GAA GGC TTT CGT GGT CCA GCT CAG CTG TCC AAT GGG TCC TTC CAG GAG CTT GAT GGC CAT GTT GAT GCC GCC TTC CGC ATG CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT CAC CAT CTG GAA GAA GGG TAT CCG AAA GAA ATC CAG CAA GAC TTC CCA GGA GTC CCC TCT CAT CTG GAC GCT GCT GTG GAG TGC CCC AAA GAG TGC GCC GAC TCA GTT CTG TTC AAG GGA AAG GAT GTA CAT GTT TAT GAC ATT GTA ACA AAG ACA GTG AAG ACC AAG ACG TGG TCC CAC CTG CCC GTC TGC ACC TCT GCT TTG CGC TGG CTA GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACC AAG TTC CAC CCG GTA ACC GGA CAG GTG AAC GGT GTT TAC CCA AAG GAC GCC CGC AGT TAC TTC ATG AAG TGC AAC TAC GGT CAT GGC GAC TAC AAA GTC CGG AAA TGC AAA ATA GAT GCC ATC ACC ACT GAC GAT GCA GGC AAA AGT TAC TTC TTC GCA GGC CCC TAC ATG CGT CTG GAC ACC AGG CGT GAC GGC CGC CAC GCC TTC CCA ATC AGC AGG TCG TGG AAG GAG GTG ACA AGC GGG GTG GAT GCT GTC TTT TCC TAC GCT GAC AAC ATT TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAC GCA GCT GCT CAC TAC ACC CTG ATT GCA GGA TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CAC GTG GAC GCT GCT TTC GTC TGT GAT AAT CAC ACA GTT CAT ATT ATC ATA GGA GGG ACG ATT CGT GCG GTG GAC CTA TCT GCC ACG CCC AGG GCC GTG ACC CGG GAG ATG CCC CTG CCT TTC TCC GAC ATT GAC GCT GCT TTG TGC AGT GCA GAA GGA GTT AAT GTG TTC AAA GGT GCA ACG TAT TAC CAC TAC GAA AGC CCC ATG ACA CTG GCT ATG 
G_aculeatus_2                              GAG GTA GCA CTA CCA GAC CGC TGC GCC GGC ATC GAG TTT GAT GCC ATC ACT CCT GAT GAG AAA GGA AAC ACT TTC TTC TTC AAA GGC AGC CAC TTG TGG AAG GGT TAC CAC GGT GCG GCT CAG CTC GCC AAT CAG TTC TTC ACA GAG CTC GAT GGC CAC GTG GAC GCA GCC TTC CGC ATG CAT GAG CAC AAC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAC CAC ACT CTG GAG AAC GGC TAC CCC AAG GAG ATC CAG GAG GAC TTC CCA GGA GTC CCC TCG CAT CTG GAT GCT GCC GTA GAG TGT CCC AAA GAG TGC GCT AAC TCG GTT CTG TTC AAG GGC CAC GAT GTG CAT ATA TAT GAT ATT ACC ACA AGG ACG GTG AAG ACC AAG ACG TGG TCC CAC CTG CCC GTC TGC ACC TCC GCT CTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA AAC AAC TTC ACC AGG TTC AAT CCG GTG TCC GGA GAG GTG AGC GGT GCC TAC CCC AAG GAC GCC CGC CAC TAC TTC ATG AGG TGC GAC TTC GGT CAT GGA GAC TAT GAA GTC CCA AAA TGC AAA ATA AAT GCC ATC TCT ACC GAT GAT GAA GGC AAA AGT TAT TTA TTT TCA GGT TCC TAC GTG CGT CTG GAC ACG CGT AAA AGC GGC CTT CAT TCC TTC CCG ATC ACC AGG TCG TGG AAG GAG GTC ACC CAA GGG GTG GAC GCC GTC TTT GCC TAC GAT GAC AAG ATG TAC ATG ATT AAG GAT GAC CAC GTT TAC ATC TAC ACG GCG GCT CAC TAC ATG CTG ATC GAA GGC TAC CCC AAA ACC CTG AAC GAG GAG CTC GGC ATC GAG GGA CAC GTG GAC GCT ACT TTT GTC TGT AAT ACA CAC ACA GTT TAT GTA CTC CAA GGA CGG AAT ATG CGT TCC GTG GAC CTT ACC GCC ACC CCC AGG GCC GTG GTG GAG GAT CTA CCC ATG CCT TTC TCC GAC ATA GAC GCC GCT CTG TGC AGT AAT GAA GGA ATC CAT TTG TTC AAG GGC TCT GAC TAT TAC CTC TAC GAG ACC CCC ATG ATA CTG GCT ATG 
H_antarcticus_2                            GAT GCT TCT CTA CCA GAC CGG TGT GAT GGG ATT GGG TTT GAT GCC ATT ACT CCT GAC GAG AAA GGA ACC ACT TTC TTC TTC AGA GGT AGC CAC TTG TGG GAA GGC TTT CAT GGT CCA GCT CAG CTG TCC AAT GAG TCC TTC CAG CAG CTT GAT GGC CAT GTT GAT GCC GCC TTC CGC ATG CAC GAT CAC ATC TAT TTA TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT CAA GCT CTG GAA GAA GGG TAT CCG AAA GAA ATC CAG CAA GAC TTC CCA GGA GTC CCC TCT CAT CTG GAC GCG GCT GTG GAG TGC CCC AAA GAG TGC GCC GAC TCA GTT CTG TTC AAG GGA CAG GAT GTA CAT GTT TAT GAC ATT GTA ACA AAG ACA GTG AAG ACC AAG ACG TGG TCC CAC CTG CCT GTC TGC ACC TCT GCT TTG CGC TGG CTA GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACC AAG TTC CAC CCG GTA TCC GGA GAG GTG AGC GGT GTT TAC CCA AAA GAC GCC CGC AGT TAC TTC ATG AAG TGC GAC TAC GGT CAT GGC GAC CAC AAA GTC CTG AAA TGC AAA ATA GAT GCC ATC ACC ACT GAT GAT GCA GGC AAA AGT TAC TTC TTC GCA GGC CCC TAC ATG CGT CTG GAC ACC AAG CGT GAC GGC CTC CAC GCC TTC CCA ATC ACC AGG TCG TGG AAG GAG GTG ACC AAC GGG GTG GAT GCT GTC TTT TCC TAC GCT GAC AAC ATT TAC TTG ATT AAG GAT GAT CAG GTG TAC ATC TAC GCA GCT GCT CAC TAC ACC CTG ATT GAA GGA TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CAC GTG GAC GCT GCT TTC GTC TGT GAT GAC CAC ACA GTT CAT ATT ATC ATA GGA CGG ACG ATT CGT GCG ATC GAC CTA TCT GCC ACG CCA AGG GCC GTG ACC CGG GAG AGG CCC CTG CCT TTC TCC GAC ATT GAC GCT GCT TTG TGC AGT GCA GAT GGA ATT AAT GTA TTC AAA GGT GCA ACG TAT TAC CGC TAC GAA AGC CCC ATG ACA CTG GCT ATG 
I_furcatus_2                               GCT GAA GCC AAG TAT GAC CGC TGT GAG GGC ATC GAG TTT GAC GCT ATA GCT CCT GAC AAG AAA GGA ACC GCA CTC TTT TTT AAA GGA GAC CAT TTA TGG AAG GGG TTT TCA GGC CCT GCT GAG CTT GCA AAT GCT ACA TTC CAG GAA TTA GAT GGT CAT GTG GAT GCA GCC TTC CGC ATG CAT GAC CAT GTC TTC TTC TTT CTG GAT GAC CAA GTC TTT AGT TAC TAC CAC ACT TTG GAG AAA GAC TTC CCT CTG GAG ATC CAG CAG GTG TTT CCA GGT GTT CCC AGC CAC CTC GAT GCA GCA GTG GAG TGT CCA AAA GAG TGC ACT GAC TCG GTC CTG TTC AAG GGA CAT GAA GTG TAC AAC TTT GAT ATC CAG ACC AAG ACC GTG AAG AAG AAG GTG TGG GAT CAC TTG CCT GTC TGC ACA TCT GCA TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAT GGT CAC AAC TTT ACC AGA TTT CAT CCC CTG TCT GGA GAA GTG GAA GTT AAT TAT CCC AAG GAA ACT AGA CGT TAC TTC ATG AGA TGC AAT GTT GGT CAC GGG GGC CAC AGA AGG CCG CGC TGT AAA CTT GAT GCC ATC ACT ACA GAC AGC ACT GGC AAA TCC TAT GCA TTT ATC GGG ATA TAC ATT AGA TTG GAC ACA CAC CGT GAT GGC ATT CAT CCC TTC CCC ATT GTA AGA TCA TGG AAG GAA GTC TCA GGA CAT GTA GAT GCT GTG TTC TCT TAT GGT GAC AGG ATT TAC ATC ATC CAG CGT GAT CAA ATT TAT ATC TAC TCG GCA GCA CAT TAC ACA CTC ATA GAG GGC TAT CCT AAA CCG CTG AAG GAG GAG TTG GGC ATT GAC GGA CCC GTG GAT GCT GCA TTT GTA TGT GAC GAA CAT ATT GTA CAT GTT ATA CAA GGT CAG AAA ATG CTC GAT ATT GAT CTG GAA GCG ACC CCA AGA GCT GTG AAG ACC GAG GCT CCA CTG CCC TTC TCT AAA ATT GAT GCT GCT ACA TGT CAC ACT GAT GGT GTG AAA GTG TTT GTT GGT GGG GAA TAC TAC CTG TAC CAG AGT CCT AAA CTG CTT GCT ACA 
I_punctatus_2                              GAA CAT GCC AAG TAT GAC CGC TGT GAG GGC ATC GAG TTT GAC GCC ATA GCT CCT GAC GAG AAA GGA ACC GCA CTC TTT TTT AAA GGA GAC CAT TTA TGG AAG GGG TTT TCA GGC CCT GCT GAG CTT GCA AAT GCT ACA TTC CAG GAA TTA GAT GGT CAT GTG GAT GCA GCC TTC CGC ATG CAT GAC CAT GTC TTC TTC TTT CTG GAT GAC AAG GTC TTT AGT TAC TAC CAC ACT TTG GAG AAA AGC TTC CCT CTG GAG ATC CAG CAG GTG TTT CCA GGT ATT CCC AGC CAC CTC GAT GCA GCA GTG GAG TGT CCA AAA GAG TGC ACT GAC TCG GTC CTG TTC AAA GGA CAT GAA GTG TAC AAG TTT GAT ATC CGG AAC AAC ACC GTG AAG AAG AAG GTG TGG GAT CAC TTG CCT GTC TGC ACA TCT GCA TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTT ACC AGA TTT CAT CCC TTG TCT GGA GAA GTG GAA GCT AAT TAT CCC AAG GAA ACT AGA CGT TAC TTC ATG AGC TGC AAT TTT GGT CAC GGG GGC CAC AGA AGG CCG CGC TGT AAA CTC GAT GCC ATC ACT ACA GAC AGC ACT GGC AAA TCC TAT GCA TTT ATC GGG ATA TAC ATT AGA TTG GAC ACA CTC CGT GAT GGC ATT CAT CCC TTC CAC ATT GTA AGA TCA TGG AAG GAA GTC TCA GGA CAT GTA GAT GCT GTG TTC TCT TAT GGT GAC AAG ATT TAC ATC ATC CAG CGT GAT CAA ATT TAT ATC TAC TCG GCA GCA CAT TAC ACA CTC ATA GAG GGC TAT CCT AAA CCG CTG AAG GAG GAG TTG GGC ATT GAC GGA CCC GTG GAT GCT GCA TTT GTA TGT GAC GAA CAT ATT GTA CAT GTT ATA CAA GGT CAG AAA ATG CTC GAT ATT AAT CTG GAA GCG ACC CCA AGA GCT GTG AAG ACC GAG GCT CCA CTG CCC TTC TCT AAA ATT GAT GCT GCT ACA TGT CAC ACT GAT GGT GTG AAA GTG TTT GTT GGT GGG GAA TAC TAC CTG TAC CAG AGT CCT AAA CTG CTT GCT ACA 
L_japonicus_2                              GAT GGA GCC CTG CCA GAC CGA TGC GCA GGT ATT GAG TTT GAT GCC ATC GCT CCC GAC GAG GAA GGA GAC ACT TTC TTC TTC AAA GGT GGC CAC TTG TGG AAG GGT TAC CAT GGT GCA GCT CAG CTC TCC AAC GAG TCC TTC AAG GAG CTC GAT GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAT TAT CAC ACA CTG GAA GAC GGG TAT CCA AAA GAG ATC CAG GAG GAC TTC CCA GGA GTC CCC ACT CAC CTG GAT GCT GCT GTG GAG TGT CCC AAG GAG TGT GGC GAC TCG GTT CTG TTC AAG GGA CAG GAT GTG CAT TTT TAT GAT ATT GCC ACA AAG ACA GTG AAG ACC AAG ACG TGG TCC CAC CTG CCT GCC TGT ACC TCT GCC TTA CGC TGG TTG GAG AAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AAG TTC AAC CCG CTA TCT GGA GAG GTG ACT GGT GCC TAC CCA AAG GAT GCC CGC AAT TAC TTC ATG ACG TGC AAC TTT GGT CAT GGA GAT TAT AAA GGC CGT AAA TGC AAA CTA GAT GCC ATC ACC AGT GAT GAT GGA GGC AAA TCT TAT CTC TTT GCA GGC CCC TAC ATG CGC CTG GAC AGC CAT CGC GAC GGC TTC CAC GCC TTC CCA ATC GTC AGG AAC TGG AAG GAG GTG GCC AGA GGG GTG GAC GCG ATC TTT TCC TAC ACT GAC AAA ATC TAC TTC ATT AAG GAT GAT CAG GTT TAC ATC TAT GAA GGT GCT CAC TAC ACC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAG CTC GGC ATT GAA GGA CGT GTG GAT GCT GCC TTC GTC TGC AAT GAA CAC ACA GTT CAT ATA ATC CAA GGA AGC AGG ATT CGT GAC GTC GAC CTA ACC GCC ACG CCA AGG GTC GTG ACC CTA GAC CTG CCC TTG CCC TTG TCC GAC ATC GAT GCT GCT CTG TGC GGT GCG GAG GGA ATT AAT CTG TTC AAG GGC TCA GAG TAT TAC AGC TAT GAG AGC ACC AAG ATA CTG TCC ACA 
M_miiuy_2                                  GAT GGT GCT CTG CCA AAC CGC TGC GAT GGT ATT GAG TTT GAT GCC ATC AGT CCT GAT GAA AAA GGA GTC ACT TAC TTC TTC AAA GGT CCT CAC TTG TGG AAG GGT TTC CAT GGT CCA GCT CAT CCC TCC AAT GAA TCC TTC GAG GAG CTT GAT GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAG GTG TTC AGC TAC TAT CAC TCT CTG GAA GAG GGG TAT CCA AAA CAG TTG AAC GAG GAC TTC CCA GGA ATC CCT GAT CAT CTG GAT TCT GCT GTT GAG TGT CCC AAA GAA TGT GCC AAC TCA GTT CTG TTC AAG GGA CAT GAT GTT CAT GTT TAT GAC ATT AGC ACA AAG ACA GTA AAG ACA AAG ACA TGG GAC CAC CTG CCT ATC TGC ACC TCT GCT TTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCG GTC ACC GGA GAG GTG AAC GGT ACC TAC CCG AAG GAT GCC CGT GCT TAC TTC ATG AGT TGC AAC TTT GGT CAT GGA CAT TAT CAA ATC CCT AAA TGC AAA ATA GAT GCC ATC ACC ATT GAT GAC GCT GGC AAA AGT TAT TTC TTT GCA GGC CCC TAC ATG CGT CTG GAC ATG CAT CGT GAC GGC CGT CAC GCC TTC AAA ATC ACC AAG TCG TGG AAG GAA CTG ACC AGT GGA GTG GAT GCT GTC TTT TCC TAT GCT GAC AAA ATG TAT ATG ATT AAG GAT GAT CAA GTT TAC ATC TAC TCT GGT CCT CAC TAC ACC CTG ATC GAA GGT TAT CCT AAA ACT CTG AAG GAA GAG CTC GGC GTT GAA GGG CAT GTG GAC GCT GCT TTT GTC TGT AGT CAA CAC ACA GTT CAT GTA GTC CAA GGA AAA AAG CTC CTT GAT GTC GAC CTA ACT GCC ACA CCC AGG GTC GTG ACC CAA GAA CGG CTT CTA CCT TTG TCC GAC ATT GAT GCT GCA ATG TGC GAT GCA AAG GGA ATT CAT TTG TTC CAA GGC TCG CAC TAT TAC AAC TAT GAG AGT GTC GAA ATA CTA ACT GCG 
M_mizolepis_2                              GAT GCC GCA CAA CTT GAC CGC TGT AAA GGC ATT GAG TTT GAT GCC ATC ACC CCA GAT GAA AAA GGA AGC ACT TTC TTT TTT AAA GGT GAC CAT CTC TGG AAT GGT TTT TCT GGC CCA GCT GAA CTC TCC AAT GGC ACA TTC AAG GAA ATG GAT GGT CAC ATT GAT GCA GCT TTC CGC ATG CAT GAC CAT GTC TTT TTC TTT CTG GAT GAC AAA GTG TTT AGC TAT TAC CAC ACT CTT GAG AAG GGA TAC CCG AAG GAA ATT CAG CAG GAG TTT CCT GAT ATC CCC AAC CAC CTA GAC GCT GCT GTT GAG TGT CCC AAA GAA TGT ACA GAT TCA GTG TTG TTC AAA GGA AAT GAA GTT TAT CAC TTT GAC ATC AAG ACA AAA TTG ACT AAG AAG AAA GTG TGG AGT CAT TTG CCA AAC TGC ACA TCT GCC TTT CGA TGG CTA GAG CAC TAT TAC TGT TTC CAT GGA CAC AGC TTC ACC AGA TTC CAT CCG GTT TCT GGA GAG GTG ACA GGA GAG TAT CCT AAA GAT GCT CGA AAC TAC TTC ATG AGG TGC GAA TTT GGT CAT GGA GGC ACA AGA AAG ATG AAA TGC AAG TTG AAT GCG GCC ACC ATA GAT GAT AAA GGA AGA GAA TAT GCA TTT CAG GGT TCA TAC ATG CGT TTA GAC GAA CAC CGT GAT GGC AAT CAT CCT TTC CCT ATT ACC AGA CAA TGG AAG GAA ATC TCT GGT GAA GTG GAT GCA GTT TTT TCC TAT GGT GAT AAT ATG TAT TTC ATT CAG GGA GAT CAG GTT TAT ATC TAC TCT GCA GCC CAT TAC ACT CTC ATT GAG GGC TAC CCG AAA CCT CTA AAG GAA GAA CTG GGC ATC GAG GGT CCT GTG GAT GCT GCA TTT GTA TGT GAT AAC ACC ATT GTA CAC ATT ATA CAA GGT CAA AAG ATG TAT GAC ATC GAT CTT ACA GCA AGC CCC AGA GCC ATT ACT AGA GAG ATG CCC ATT CCC ATT CCT AAA GTT GAT GCG GCC GTC TGT GAT GCT CAT GGG GTA AAG GTG TTC ATT GGT CCA GAG TAC TAT GAC TTT GGC AGC CCA ATG GTA CTA GCT GTA 
O_latipes_2                                GAT GGA GCT TTG CCA GAT CGA GGT GCA GGT ATC GAG TTC GAT GCC ATC ACT CCT GAC GAC AAG GGT CAA ACT TTT TTC TTC AAA GGA GAT CAT GTT TGG AAG GGC TTT GAG GGT GAC GCT CAA CCA TCC AGT CAG TAT TTT AAG GAG TTA AAC GGT CAT GTG GAT GCT GCT TTC CGT ATG CAC GAC CAT ATC TAC CTT TTC CTG GAT GAC AAA GTG TTT AGT TAC TTT CAC ACT CTC GAG GAA GGC TAT CCA AAA GAA ATC CAA GAG GAT TTT CCT GGA GTT CCC GCC CAC CTG GAT GCA GCT GTG GAG TGT CCC AAA GAG TGC ACC GAT TCC GTT TTG TTC AAA GGT CCA GAT GTA CAT GTT TAT GAT ATT GTC ACA AAG ACA GTG AAG ACC AAG ACA TGG CCC CAC CTA CCT GCC TGT ACC TCT GTC TTC CGC TGG TTG GAG CAC TAT TAC TGT TTC CAT GGA CAC AAC TTC ACC CGT TTC CAA CCC GTA ACC GGG GAG GTG ACT GGT AAT TAT CCC AAA GAT GCC CGC AGG TAT TTC ATG CGC TGC GAC TTT GGT CAC GGA GAA AGA ACA ACC TTG AAA TGC AAA ATG GAC GCA ATC ACT ACT GAT GAT ACC GGC AGA ATG TAC ATG TTT AAA GGT TCC TAC ATG CGT TTG GAC ACC CAC CGT GAT GGA CTG CAC GCC TTT CCA ATA ACC ACG TCG TGG AAA GAA CTG ACC AAT GGC GTG GAC GCT GTT TTC TCT TAT AAC GAC CGA ATC TAC TTG ATT AAG GGA GAT CAA GTT TAC ATC TAT GCA GGT GCT CAC TTC ACC CTG ATT GAA GGC TAT CCT AAA ACG CTG AAG GAG GAG CTT AAC ATT GAA GGA CAG GTG GAT GCT GCT TTT GTG TGT GGC CAA CGC ACA GCT CAC ATT ATT CAA GGA AGG AAG ATT ACC TAC ATC AAC CTC GCT GCC ACG CCC AGG GAA ATC ACC CTC GAC GCT CCT TTG CCT TTT GGC GAC ATA GAT GCT GCT TTC TGC TCT TCA GAC GGC ATT AAA ATT TTC CAA GGG TCG AAC TAC TAC CAC TAT GAT AGC CCG ATG TTA CTG GTT ATG 
O_mykiss_2                                 GAC CAT GCC AAC CCA GAC CGG TGT GAC GGC ATC GAG TTT GAC GCC ATC GTC CCC GAC GAG AAC GGA CAC ACC TTC TTC TTC AAG GGG GAT CAC CTG TGG AAC GGC TTC AAG GGT CCA GCT CAG GTC TCC AGT GCC TTC TTC AAG GAG CTA GAT GGG CAT GTT GAC GCT GCC TTC CGC ATG CAT GAT CAC ATC TAC TTT TTC CTG GAC GAC AAG GTT TTC AGC TAC TAT CAC AGT CTG GAG GAG GGC TAC CCC AAG GAC ATC CAG CTG GAC TTC CCA GGG GTG CCC AGC CAC GTG GAC GCT GCG GTG GAG TGC CCC AAG GAG TGT TCA GAC TCT GTC CTA TTC AAG GGA GAA GAA GTG TAC AAC TAT GAC ATC GCC ACG CAG TCA GTA AAG GAG AAA CAG TGG GCC CAC CTG CCC AAC TGT ACG TCT GCC TTC CGT TGG CTA GAG CAA TAC TAC TGT TTC CAT GGT CAC AAC TTC ACC CGG TTC CAC CCT GTA TCT GGG GAG GTG AAT GGA GTG TAC CCT AAG GAC TCC AGG CAC TAC TTC ATG AGT TGC AAT TTC GGC CAT GGC GAG GCA AAT GTT CCC AAA TGC ACA TTG GAT GCC ATC ACC TCA GAC GAC TCA GGC AAA ACC TAT GCC TTC ACT GGT CAT TAT ATG CGT CTA GAC ACC CAT CGT GAT GGT AAA CAT ACC TTC CCC ATT GCC AGA ACC TGG AAG GAA GTG ACC AAC GGC GTG GAC GCA GTC TTC TCC TAC AGT GAC AAG ATC TAC ATT ATC AAG GGC GAC CAA GTT TAC ATC TAC TCA GCA GCT CCC TCC ACT CTG ATT GAG GGC TAC CCT AAA AGC CTG AAT GCG GAG CTG GGC ATC GAA GGG CCT GTG AAC GCA GCC TTT GTT TGT GAT CAC CAT ATT GTG CAC ATT ATT CAA GGA CAG AAG ATG CTG GAC ATT GAC CTA TCT GCC ACC CCT AGG GTA GTA GCC AGT GAG GCC CCA CTG CCC ATC TCC GGC ATC GAG GCA GGC ATG TGT GGC CGT GAT GGA GTC AAA GTG TAT GTG GGC TCT GAG TAC TAC CAC TAC GAG ACA CCC AGG CTC CTG GCT TTC 
O_niloticus_2                              AAA GCT GCT CTA CCA GAC CGG TGT GAA GGA ATT GAG TTT GAT GCC ATC ACT CTT GAT GAG AGT GGA AAC CCC TTC TTT TTC AAA GAT GGC TAC CTG TGG AAT GGT TTC TAT GGT CCA GCT AAA CCC TCA ACG ATG TTC TTC AAG GAG CTA GAT GGC CAT GTC GAT GCT GCT TTT CGG ATG CAC GAT CAC ATC TTC CTC TTC CTG GAT GAC CAC GTG TTC AGC TAT TAC CAC ACT CTG GAG ACC GGA TAT CCA AAA ACT ATC CAG GAA GTT TTT CGT GGA GTC CCC ACA CAT CTA GAT GCT GCT GTG GAG TGT CCT CAA GAG TGC ACC GAC TCT GTT CTG TTC AAA GGG CAA GAT GTG TAT GTT TAT GAT ATA GTC ACA AAG ACA GTG AAG ACC AAG ACG TGG GCC CGC CTG CCT CTC TGC ACG TCT GCT TTC CGC TGG GTG GAA CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCA ATA TCA GGA GTA GTT AAC GGC ACG TAC CCA AAG GAT GCC CGC AAT TAC TTC ATG AAC TGC AAC TTT GGT CAC GGA GAT CAC AAG GCT CCT AAA TGC AAA CTA GAT GCC ATT ACT ACA GAT GAC AGA GGC AGA ATT TAT TTA TTT ACA GGG CTT TAC ATG CGT GTG GAC AAC AGG CGT AAC GGC CTT CAC GCC TTT CCA ATA ACC AGG GGA TGG AAA GAA GTG ACA AAC GGG GTG GAT GCC GTT TTC TCC TAC ACC GAC AAA ATG TAC TTG ATT AAG GAT GAT CAG GTT TAC ATC TAT ACT GAT GCC CAC TAC GTC CTG ATT GAA GGC TAC CCT AAA TCC CTC AGG GAG GAA TTG GGC ATT GAA GGA ACG GTG GAT GCC GCT TTC CTC TGT AAT GAA CAC ACA GTT CAT ATA CTC CAA GGA CAC AGG ATT CGT GAT GTT GAC CTC AGT GCC ACA CCC AGG GTC ATC AAC CGA GAA ATA CCT TTG CCC TTG CCT GAC ATT GAT GCT GGT CTC TGT GGT CCA GAT GGC ATT AAA GTG TTC AAG GGG TCA CAG TAT TAC CTC TAT GAG AGT CCC ATG GTA TTG GCT ACA 
P_altivelis_2                              GAT CCG GCC AAG CTA AAC CGG TGT GAT GGC ATC GAG TTT GAC GCC ATC GCC CCT GAT GAG AAA GGA AAC ACT TTC TTC TTT AAA GGT GAC CAC CTG TGG AAG GGC TTC CAC GGA CCA GCT CAG CTC TCT AAC GAG ACC TTC AAG GAG CTG GAT GGA CAC ATA GAC GCT GCC TTC CGC ATG CAC GAT CAT ATC TAC TTC TTC TTG GAT GAT AAA GTA TTC AGC TAC TAT CAG ACT CTG GAG GAG GGC TAT CCA AAA GAC ATC CAG GCA GAC TTC CCA GGT GTC CCC AGA GAC CTG GAC GCC GCT GTA GAG TGT CCA CAG GAA TGT TCA GAC TCG GTC CTG TTC AAA GGA GAT ACG GTG TAC AGT TAC GAC ATC CCG ACC AAG ACA GTC AAA GAG AAA GCG TGG CCT CAC CTA CCC TCC TGC ACC TCC GCC TTC CGT TGG CTG GAA CAT TAC TAC TGT TTC CGA GGA AAC GAG TTC ACC AGG TTC CAC CCT GTT ACC GGG GCT GTG GAA GGA GAT TAC CCC AAG GAT GCA AGA GCT TAC TTT ATG AGG TGC AAC TTC GGA CAT GGG AGG TCA ATG GTT CCC AAA TGC AGC CTG AAC GCC ATT ACA ACC GAC AGC GCC GGT AAA ACC TAC GCC TTC AGA GGT TCG TAC ATG CGT CTG GAC ACG CAC CGT GAC GGC AAA CAT GCC TTC CCT ATC ACC AGG TCC TGG AAG GAC ATT CCT GGG GCT GTG GAC GCT GTC TTC AGC CAC AAA GAC AGG ATG TAC ATG ATC GCG GGG GAT CAA GTC TAC ATT TAC TCG GCT GCC CAC TAC ACT CTC ATT GAG GGC TAC CCC AAA TCC CTG AAG GAG GAG ATG GGC ATT GAT GGC ACT GTG GAC GCA GCT CTT CTG TGT GAC GAA AAT ACA GTG CAC TTT ATT CAA GGC CAG AAG ATG CTT GAC GTC GAC CTG TCT GCC ACC CCC AGG ACC GTG ACG AGT GAC GCT CCC CTG CCT ATT GCG GGG ATC AAT GCC GCC ATG TGT GGT CCG AAT GGG GTC AGA GTG TTT GTG GGG TCG GAG TAC TAC GAC TAT GAA ACC CCA AGG CTG CTG GCG TTC 
P_flavescens_2                             GAC TGT GCT CTT CCA GAC CGG TGT GCA GGT ATT GAG TTT GAT GCC ATT ACT CCT GAT GAG AAA GGA AAC ATG TTA TTC TTC AAA GGT AGC CAC TTG TGG CCG GGT TTC CGT GGT CCA GCT CAG CCC TCC AAT GAG TCC TTC AAG GAG CTT GAT GGC CAT GTT GAT GCT GCC TTC CGC ATG CAC GAT CAC ATC TAT TTC TTC CTG GAT GAC AAA GTG TTC AGC TAT TAC CAT ACC CTG GAG GAC GGG TAT CCA AAA GAG ATC CAG GAG GAC TTC CCA GGG GTC CCC ACT CAT CTG GAT GCT GCT GTG GAG TGT CCC AAA GAA TGC GCT GAC TCA GTT CTA TTT AAG GGA AAT GAT GTG CAC GTT TAT GAT ATT ACC ACA AAG ACA GTG AAG ACC AAG ACA TGG TCC CAC CTG CCT GTC TGC ACC TCT GCT ACA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA CAC AAC TTC ACC AGG TTC CAC CCG GTA TCC GGA CAG GTG AGC GGT GAC TAC CCC AAG GAC GCC CGC AGG TAC TTC ATG ACG TGC AAC TTT GGT CAT GGA CAT TAT AAA GTC CTG AAA TGC AAA ATA GAT GCC ATC ACC ACT GAT GAT ACA GGA AAA ATG TAT ATC TTT GCA GGC CCC TAC ATG CGT CTG GAC ACC AGT CGT GAC GGA CTT CAC GCC TTT CCA ATC ACC AGG GCG TGG AAG GAG GTG ACC GGC GGA GTG GAT GCT GTT TTT TCC TAC ACT AAC AAA ATC TAC TTG ATT AAG GGT GAT CAG ATT TAC ATC TAT ACA GCT GCT CAC TAC ACC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAG CTA GGC ATT GAA GGA CAT GTG GAC GCT GCT TTT CTC TGT AAT GAA CAT ACA GTT CAT GTA ATC CAA GGA CAG AAA TTG CGC GCC GTT GAC CTT ACC GCC TCA CCC AGG GCC GTG ACC CAG GTT CTG CCC ATG TCC TTG TCC GAC ATC GAT GCA GCT GTG TGC GGT GAA GAA GGA ATT AAA GTG TTT AAG GGC TCA CAG TTC TAC AAC TAT GAA AGC CCC AGG TTA CTG GCT TTG 
P_promelas_2                               GAT GCT GCC AAA CCT GAC CGG TGT ACT GGC ATT GAG TTT GAT GCC ATC ACT CCT GAC GAA AAA GGA GAC ACT TTC TTT TTC AAA GGT GAC CAT TTA TGG AAA GGT TTC TCC GGA TCA GCT GAG CTC TCA AGC AGC TTC TTC AAA GAA CTG GCT GGT CAT GTC GAT GCA GCC TTC CGC ATG CAT GAC CAT GTC TAC TTC TTT CTG GAT GAC AAA GTC TTT AGC TTT TAC TAC ACC CTT GAG AAA GGC TAC CCT GTG GAG ATC CAG CAG GAG TTT CCT GGT GTC CCC AGC CAC TTA GAT GCT GCG GTC GAG TGT CCC AAA GAA TGC ACT GAT TCA GTG CTG TTC AAA GGA AAT GAA ACT TAC AGC TAT GAC ATC AAG ACA AAG ACA GTT AAG AAG AAG ATG TGG ACA CAC TTG CCA ACC TGT ACA TCT GCC TTT CGC TGG CTA GAG CAC TAT TAC TGT TTC CAT GGG AAC AAC TTC ACC AGA TTT CAT CCT GTT TCT GGG GAG GTC ACG GGA ACA TAT CCT AAG GAT GCC CGA CAC TAC TTC ATG AGG TGC GCC TTT GGT CAT GGA GAT GCA AGA AGG CTA CGC TGC AAG CTG CAT GCT ATC ACC ACA GAT GAT AAA GGG AGA ACA TAT GCA TTC CAT GAT GCA TAC TTG CGT TTG GAC TCA CAC CGA GAT GGC ATT CAC CGT TTC CCT ATT TCA AGG TCA TGG AAG GAA ATC TCT GGT GGA GTG GAT GCA GTT TTT TCT TAT GGT GAT ACT ATG TAC ATC ATC CAG AGT GAT CAA GTC TAT ATC TAC TCA GCA GCC CAT TAT ACT CTC ATA GAG GGC TAC CCC AAA CCT CTG AAG GAA GAA CTA GGC ATC GAT GGC CCT GTG GAT GCA GCA TTT TTG TGT AAA CAG GAC ACT GTA TTC TTT ATA CAA GGT CAA AAT ATG CGT GCA GTT GAT CTT GCG GCC ACA CCC CGA GTT GTT AAA AAG GAG ACA CCT ATT CCC TTC CCT AAA ATT GAT GCT GGC TTC TGT GAT GCT GAT GGT GTG AAG GTG TTT ATT GGA CCA GAA TAC TAT TCA TAT GAA AGC CCA ATG ATT CTA GCT ATG 
R_rutilus_2                                GAT GCC GCC CAA CCT GAC CGG TGT AAA GGC ATT GAG TTT GAT GCC ATC ACT CCC GAT GAA AAA GGA AAC ACT TTC TTT TTC AAA GGT GAC CAT TTA TGG AAA GGT TTC TTT GGA TCA GCT GAG CTC TCA CGC AGC ATC TTC AAA GAA CTG GAC GGT CAT GTT GAT GCA GCC TTC CGC ATG CAT GAC CAC ATC TAC TTT TTT CTG GAT GAC AAA GTC TTC AGC TTT TAC CAC ACC CTT GAG AAA GGC TAC CCT GTG GAG ATA CAG CAG GAG TTT CCT GGT ATC CCC AGC CAC TTA GAT GCT GCT GTT GAG TGT CCC AAA GAA TGC ACT GAT TCA GTG CTG TTC AAA GGA AAC GAA ACT TAC AGC TAT GAC ATC AAG ACA AAG ACA GTT AAG AAG AAG ATG TGG ACA CAC TTG CCA AAC TGC ACA TCT GCC TTT CGC TGG TTA GAG CAC TAT TAC TGT TTC CAT GGT CAC AAC TTC ACT AGA TTC CAT CCT GTT TCT GGG GAG GTG ACA GGA ACA TAT CCT AAG GAT GCC CGA AAC TAC TTC ATG AGG TGC GGA TTT GGT CAT GGA GGT GCA ACA AGG CTA CGC TGC AAG CTG CAT GCT ATC ACC ACA GAT GAT AAA GGG AGA TCA TAT GCA TTC CAT GAT GCA TAC TTG CGT TTG GAC ACA CAC CGA GAT GGC AGT CAC CAT TTC CCT ATT TCA AGG TTA TGG AAG GAA ATC TCT GGT GGA GTG GAT GCT GTT TTT TCT TAT GGT GAT AAT ATG TAC ATC ATC CAG GGT GGT CAA GTC TAT ATC TAC TCG GCA GTC CAT TTT ACT CTC ATA GAG GGC TAC CCT AAA CCT CTG AAG GAA GAA CTA GGC ATC GAT GGT CCT GTG GAT GCA GCA TTT TTG TGT AAA CAG CAC ACT CTA CAC TTT ATA CAA GGT CAA AAG ATG TAT GAA GTT GAT CTT TCG GCC ACA CCC CGA GTT GTT AAA AAG GAG ATG CCT ATT CCC TTC CCT AAA ATT GAT GCC GGC TTC TGT GAT GCT GAT GGT GTG AAG GTG TTT ATT GGG GCA AAA TAC TAT TCA TAT GGA AGC CCA ATG ATT CTA GCT CTG 
S_schlegelii_2                             GAT GCA GCT CTA CCA GAC CGC TGT GAT GGT GTT GAG TTT GAT GCC ATC ACT CCT GAT GAG AAA GGA AAC ATT TTC TAC TTC CAA GGA AAC CAC TTG TGG ATG GGT TTC CAC GGG GCA GCT CAA CTT TCC AAT GAG TCC TTC GAG GAG CTA GAT GGT CAT GTT GAC GCT GCC TTC CGC ATG CAC GAC CAC ATC TAT TTC TTC CTG GAT GAC CAT GTG TTC AGC TAC TAT CAC ACT CTG GAG GCC GGG TAT CCC AAA GAC ATC ACG GAG GAT TTC CCA GGA ATC CCC TCT CAC CTG GAT GCT GCT GTG GAG TGT CCC AAA GAG TGC GCC GAC TCA GTT CTG TTC AAG GGA AAT GAT GTG CAC GTT TTT GAT ATT ACC ACA AAG TCG GTG AAG ACA AAG ACG TGG TCC CAC CTG CCC AAC TGC ACC TCT GCC CTA CGC TGG CTG GAG CAC TAC TAC TGT TTC CAT GGA AAC AAC TTC ACC AGG TTC CAT CCG GTG ACC GGA GAG GTG TCC GGG ACC TAC CCC AAG GAC GCC CGG GAT TAC TTC ATG AAG TGC GAC CAT GGT CAT GGA GAA CGT AAG GTC ATG AAA TGC AAA TTG GAT GCC ATC ACC TCT GAT GAT GCC GGC AAA ACT TAC TTC TTT GCA GGC TCC TAC ATG CGT CTG GAC ACC CAT CGT GAC GGC CTT CAC GCA TTC AAA ATC AAC AGG ACG TGG ACG GCG GTG GAC GAC GGG GTG GAT GCT GTC TTT TCC TAC TCT GAC AAA ATC TAC ATG ATT AAG GAT GAT AAC GTT TAC ATC TAT TCA ACT GCT CAC TAC GTC CTG ATT GAA GGC TAC CCT AAA ACC CTG AAG GAG GAA CTC GGC ATT GAA GGA CAT GTG GAC GCT GCT TTC GTC TGT GAT AGC GAC ATA GTT CAT GTA ATC CAA GGA AAC AAG CTT TAT GAT GTC GAC CTT ACT GCC ACA CCC AGG AAC GTG ACC CAA GAG TTT CCC TCG CCC CTG GAC GAC ATC GAT GCT GCG ATG TGC AAC GCG AAT GGA ATT AAT GTG TAC AAG GGT TCG AAT TAT TAC CAC TAT GAC AGC CTC ATG TTA CTG ACT TTC 
T_nigroviridis_2                           GAC AAC GCT CTG CCG GAC CGA TGC GCA GGA ATC GAG TTT GAT GCC ATC ACT CCT GAC GAA AAA GGA AAG ACT TTC TTC TTC AAA GGT GCC TAC ATG TGG AAG GGT TTC CAA GGA CCG GCG CAG CTC GTC AGC GAG TCC TTC AAG GAA ATC GAC GGT CAC ATA GAC GCG GCC TTC CGC ATG CAC GAC CGC ATC TAC TTC TTT TTG GAG GAC AAG GTG TTC AGT TAC TAT CAC GTC CTG GAA GAC GGC TAT CCA AAA CAC ATC AGT GAG GAG TTT CCT GGT GTT TCC ACA CAC CTG GAT GCA GCC GTG GAG TGC CCC AAA GAG TGC GCT GAT TCA GTC TTG TTC AAA GGA CAA GAG GTT TCT GTG TAT GAT CTG AGC ACC AAA ACG GTG AAG ACC AAG ACA TGG TCC CAC CTG CCT GCC TGC ACC TCT GCT CTC CGC TGG CTG GAG CAC TAC TAC TGT TTC CAC GGA AAC AAC TTC ACT CGA TTC CAC CCC GTA TCC GGA GAG GTG AAC GGG ACC TAC CCG AAG GAC GCC AGG CAT TAC TTC ATG AGG TGT AAC TTC GGA CAC GGA GGC TAC CAA CCC CCC GAA TGC AAA TTA GAC GCC ATC ACG GCT GAT GAT GCG GGG AAA ATG TAT GCC TTT GCA GGG CCC TAC ATG CGC CTG GAC ACC CGG CGC GAC GGC ATC CAC GCC TTC CCC ATC ACC CGT TTG TGG AAG GAG GTG GTT GGA AGG GTG GAC GCG GTG TTT TCC TAC ACT GAC AAA ATG TAC CTA ATC AAG GGA ACA CAG GTT TAC ATC TAC GGA GGC GCT CAC TAC ACG CTG ATT GAA GGC TAC CCT AAA ACC CTG AAA GAG GAG CTG GGG CTG GAG GGT CCT GTG GAC GCT GCC TTT GTG TGT GAT CAA CAC CTG GTT CAC ATC ATT CAG GGA AAC CGA ATT CTT GAC GTT TCC CTG ACT GAC ACA CCC AGG ATC GTT ACC CGA AAC CTG CCC TTC GCC TTG ACC GGC ATC GAT GCG GCC TAC TGC GAC TCA GAG GGC GTT AAG CTG TTC ATC GGC TCC AAG TAT TAC CAC TAC CAG AGT GTC ACG GTG ATG GTT TTG 
T_rubripes_2                               GAC AAC GCT CTG CCA GAC CGG TGT GCA GGA ATT GAG TTT GAC GCC ATC ACT CCT GAC GAA AAA GGA AAG ACT TTG TTC TTC AAA GGT GCC TAC ATG TGG AAG GAT TTT CAT GGA CCA GCA CAG CTT GTC AGC GAG TCC TTC AAG GAA ATT GAC GGC AGC ATC AGT GCT GCC TTC CGA ATG CAT GAC CGC ATT TAC CTC TTC CTG GAA GAC AAG GTG TTC AGC TAT TAT CAA GTC CTG GAA GAA GGC TAT CCA AAA CAT ATC AAT GAG GAA TTC CCT GGT GTT CCC ACA CAC CTG GAC GCA GCA GTG GAG TGC CCC AAA GAG TGT GCT GAT TCT GTT TTA TTC AAG GGA CAG GAT GTT CAC ATG TAT GAT CTG AGC ACC AAG ACA GTG AAG ACC AAG ACA TGG TCC CAC CTG CCT GCT TGC ACC TCT GCT TTT CGC TGG CTG GAG CAC TAT TAC TGC TTC CAT GGA CAC AAC TTC ACC AGG TTC AAC CCA ATA TCT GGA GAG GTG AAC GGA ACT TAT CCA AAA GAT GCC CGG CAT TAC TTT ATG AGG TGT AAC TTT GGA CAC GGA GGC TAT AAC ATC CCT AAA TGC AAA ATA GAT GCC ATC ACG GTT GAT GAA GCA GGA AGA ATG TAT GCC TTT GCA GGA CCC TAC ATG CGC CTT GAC ACT CGC CGG GAT GGT TTT CAT GCC TTC CCG ATC ACT CGG CAG TGG AAG GAG GTG GTT GGA AAA GTG GAC GCG GTA TTT TCC TAC GGC GAC AAG ATG TAC CTA ATC AAG GGT AAA CAG GTT TAC ATC TAC GGC GGT GCT CAC TAC ACC CTG GTT GAA GGC TAT CCT AAG ACC CTG GAA GAG GAG CTT GGG GTC GAA GGA CCT GTG GAT GCT GCT TTC GTG TGT GGC CAG CAC ACG GTT CAT ATC ATT CAA GGA GAA CGA TTT CTT GAT GTT TCA TTA ACG GCC ACA CCC AGG GTT GTT GCC CGA AAC CTG CCC TTC GTT CTG TCC GAC ATT GAT GCA GCC TAC TGT GAT GCA AAG GGA GTC AAG TTA TTC AGC GGC TCC AAG TAT TAT CAA TAT GCC AGC GTC ACA ATA CTG GCT TTG 
X_hellerii_2                               GAT GGA GCC GCT CCA GAC AGA TGT GGC GGT GTT GAA TTC GAC GCC ATT GCT CCT AAT GAA AAA GGA AAC ACT CTC TTC TTC AAA GGT GAT CAC GTG TGG AAT GGC TTC ACT GGT CCA GCT CAG CTC TCC AGT TTG CAC TTT AAG GAA CTG AGT GGT CCT ATT AAT GCC GCT TTC CGC ATG CAC GAT CAC ATC TAC CTT TTC CAG GAT GAT AAA GTG TAC AGT TAC TTT CAA ACT CTG GAG GAA GGG TAT CCA AAA CAA ATC CAA GAG GAT TTT CCT GGA GTT CCC ACT CAC CTG GAC GCT GCA GTG GAG TGT CCC AAA GAG TGC GCT GAT TCG GTT CTG TTT AAA GGC CAG GAT GTG CAT GTT TAT GAT ATT GCC ACA AAA GCA GTG AAG ACC AAG ACA TGG TCC CAC CTG CCG TCC TGC ACG TCT GCT TTC CGC TGG CTC GAG CAC TAC TAC TGT TTC CAC GGA CAG AAC TTC ACC CGC TTC CAC CCC GTC TCA GGA GAG GTG ACC GGC GCC TAC CCC AAA GAC GCC CGG CAT TAC TTC ATG AAC TGC AAC TTC GGT CAC GGA GAT CGG AAA CCT CTT AAA TGC AAA CTG AAT GCA GCC ACC ACA GAC GAT GGA GGC AGG ACG TAT TTC TTT GCA GGT CCG TAC ATT CGG GTT GAC ACA CAC CGT GAC GGA TTT CAT GCC TTC CCA ATA ACC AGA GCG TGG AAG GAG GCG AAC GAT GGA GTT GAT GCC GTT TTC TCT TAC GAC AGC AAA ATG TAC TTG ATT AAG GGC GAT CAG GTT TAC ATC TAC GCA GAC GCT CAC TTC ACC TTG ATT GAA GGC TAC CCT AAA ACT GTC AAG GAG GAG CTG GGC ATT GAG GGA ACT GTG GAT GCT GCA TTT GTA TGC ACT GAA AAC ATA GCT CAC ATA ATT CAA GGG AAC AGT ATG CGT GAC GTT GAC CTC ACC GCC ACA CCC AGG GTT ATT AGC CGA GAA TTC CCA TTG CCG TTG TCT GAT ATA GAC GCC GGT CTG TGC GGT GAT GAC GGG ATA AGG TTA TTT AAA GGC TCG CAG TTT TAC TAC TAT GAA AGC CCC AGG ATA CTG GCG ATG 



Model 0: one-ratio


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 41): -12495.575599      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.457856 0.114123 0.141096 0.075332 0.147019 0.263755 0.373567 0.388719 0.093781 0.017853 0.042025 0.023403 0.191678 0.372330 0.487686 0.308391 0.306269 0.260621 0.034924 0.040470 0.251813 0.062653 0.046643 0.046698 0.437935 0.383150 0.236163 0.078722 0.156309 0.603945 0.474897 0.464230 0.170813 0.475690 0.578875 0.625620 0.031777 0.045670 0.409373 1.787010 0.216804
SEs for parameters:
 0.050059 0.031263 0.024568 0.019606 0.037698 0.053335 0.063223 0.061095 0.028938 0.013441 0.018276 0.015276 0.028754 0.039824 0.050356 0.042779 0.040442 0.033476 0.016119 0.017573 0.031366 0.016048 0.014377 0.020397 0.046302 0.044685 0.031180 0.028550 0.038802 0.062117 0.057536 0.048062 0.047666 0.064631 0.060525 0.068014 0.013612 0.016219 0.047901 0.073618 0.006941

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =   9.72187

(1: 0.457856, (16: 0.141096, 17: 0.075332): 0.114123, ((((((((2: 0.191678, 9: 0.372330): 0.023403, (19: 0.308391, 20: 0.306269): 0.487686): 0.042025, 8: 0.260621): 0.017853, (((3: 0.062653, 5: 0.046643): 0.251813, (4: 0.437935, 18: 0.383150): 0.046698): 0.040470, 15: 0.236163): 0.034924): 0.093781, ((11: 0.603945, 21: 0.474897): 0.156309, 13: 0.464230): 0.078722): 0.388719, (12: 0.475690, 14: 0.578875): 0.170813): 0.373567, (6: 0.031777, 7: 0.045670): 0.625620): 0.263755, 10: 0.409373): 0.147019);

(D_rerio_2: 0.457856, (P_promelas_2: 0.141096, R_rutilus_2: 0.075332): 0.114123, ((((((((D_labrax_2: 0.191678, M_miiuy_2: 0.372330): 0.023403, (T_nigroviridis_2: 0.308391, T_rubripes_2: 0.306269): 0.487686): 0.042025, L_japonicus_2: 0.260621): 0.017853, (((D_mawsoni_2: 0.062653, H_antarcticus_2: 0.046643): 0.251813, (G_aculeatus_2: 0.437935, S_schlegelii_2: 0.383150): 0.046698): 0.040470, P_flavescens_2: 0.236163): 0.034924): 0.093781, ((O_latipes_2: 0.603945, X_hellerii_2: 0.474897): 0.156309, O_niloticus_2: 0.464230): 0.078722): 0.388719, (O_mykiss_2: 0.475690, P_altivelis_2: 0.578875): 0.170813): 0.373567, (I_furcatus_2: 0.031777, I_punctatus_2: 0.045670): 0.625620): 0.263755, M_mizolepis_2: 0.409373): 0.147019);

Detailed output identifying parameters

kappa (ts/tv) =  1.78701

omega (dN/dS) =  0.21680

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1      0.458   809.4   264.6  0.2168  0.0807  0.3724  65.4  98.6
  22..23     0.114   809.4   264.6  0.2168  0.0201  0.0928  16.3  24.6
  23..16     0.141   809.4   264.6  0.2168  0.0249  0.1148  20.1  30.4
  23..17     0.075   809.4   264.6  0.2168  0.0133  0.0613  10.8  16.2
  22..24     0.147   809.4   264.6  0.2168  0.0259  0.1196  21.0  31.6
  24..25     0.264   809.4   264.6  0.2168  0.0465  0.2145  37.6  56.8
  25..26     0.374   809.4   264.6  0.2168  0.0659  0.3039  53.3  80.4
  26..27     0.389   809.4   264.6  0.2168  0.0686  0.3162  55.5  83.7
  27..28     0.094   809.4   264.6  0.2168  0.0165  0.0763  13.4  20.2
  28..29     0.018   809.4   264.6  0.2168  0.0031  0.0145   2.5   3.8
  29..30     0.042   809.4   264.6  0.2168  0.0074  0.0342   6.0   9.0
  30..31     0.023   809.4   264.6  0.2168  0.0041  0.0190   3.3   5.0
  31..2      0.192   809.4   264.6  0.2168  0.0338  0.1559  27.4  41.3
  31..9      0.372   809.4   264.6  0.2168  0.0657  0.3029  53.1  80.2
  30..32     0.488   809.4   264.6  0.2168  0.0860  0.3967  69.6 105.0
  32..19     0.308   809.4   264.6  0.2168  0.0544  0.2509  44.0  66.4
  32..20     0.306   809.4   264.6  0.2168  0.0540  0.2491  43.7  65.9
  29..8      0.261   809.4   264.6  0.2168  0.0460  0.2120  37.2  56.1
  28..33     0.035   809.4   264.6  0.2168  0.0062  0.0284   5.0   7.5
  33..34     0.040   809.4   264.6  0.2168  0.0071  0.0329   5.8   8.7
  34..35     0.252   809.4   264.6  0.2168  0.0444  0.2048  35.9  54.2
  35..3      0.063   809.4   264.6  0.2168  0.0110  0.0510   8.9  13.5
  35..5      0.047   809.4   264.6  0.2168  0.0082  0.0379   6.7  10.0
  34..36     0.047   809.4   264.6  0.2168  0.0082  0.0380   6.7  10.1
  36..4      0.438   809.4   264.6  0.2168  0.0772  0.3562  62.5  94.3
  36..18     0.383   809.4   264.6  0.2168  0.0676  0.3117  54.7  82.5
  33..15     0.236   809.4   264.6  0.2168  0.0416  0.1921  33.7  50.8
  27..37     0.079   809.4   264.6  0.2168  0.0139  0.0640  11.2  16.9
  37..38     0.156   809.4   264.6  0.2168  0.0276  0.1271  22.3  33.6
  38..11     0.604   809.4   264.6  0.2168  0.1065  0.4913  86.2 130.0
  38..21     0.475   809.4   264.6  0.2168  0.0837  0.3863  67.8 102.2
  37..13     0.464   809.4   264.6  0.2168  0.0819  0.3776  66.3  99.9
  26..39     0.171   809.4   264.6  0.2168  0.0301  0.1389  24.4  36.8
  39..12     0.476   809.4   264.6  0.2168  0.0839  0.3869  67.9 102.4
  39..14     0.579   809.4   264.6  0.2168  0.1021  0.4709  82.6 124.6
  25..40     0.626   809.4   264.6  0.2168  0.1103  0.5089  89.3 134.7
  40..6      0.032   809.4   264.6  0.2168  0.0056  0.0258   4.5   6.8
  40..7      0.046   809.4   264.6  0.2168  0.0081  0.0371   6.5   9.8
  24..10     0.409   809.4   264.6  0.2168  0.0722  0.3330  58.4  88.1

tree length for dN:       1.7145
tree length for dS:       7.9080


Time used:  4:40


Model 1: NearlyNeutral (2 categories)


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 42): -12054.964331      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.487899 0.105793 0.142173 0.081350 0.148726 0.212882 0.453410 0.405848 0.088379 0.020562 0.037805 0.027496 0.195024 0.393639 0.514055 0.325098 0.319261 0.278324 0.026226 0.032736 0.273129 0.065370 0.046915 0.039771 0.474287 0.407343 0.253455 0.076994 0.163231 0.651955 0.511367 0.494793 0.174380 0.509460 0.637919 0.723088 0.033240 0.045452 0.437396 1.969262 0.724422 0.097148
SEs for parameters:
 0.058515 0.032092 0.025184 0.021007 0.041901 0.060062 0.075207 0.069356 0.031417 0.014921 0.019560 0.017822 0.030124 0.044960 0.058866 0.048887 0.045372 0.035291 0.017237 0.017384 0.035020 0.016601 0.015132 0.022077 0.053649 0.048125 0.033231 0.030644 0.043227 0.069816 0.066411 0.056967 0.059158 0.074456 0.074203 0.084082 0.014990 0.017250 0.054271 0.084698 0.029087 0.004408

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =  10.31623

(1: 0.487899, (16: 0.142173, 17: 0.081350): 0.105793, ((((((((2: 0.195024, 9: 0.393639): 0.027496, (19: 0.325098, 20: 0.319261): 0.514055): 0.037805, 8: 0.278324): 0.020562, (((3: 0.065370, 5: 0.046915): 0.273129, (4: 0.474287, 18: 0.407343): 0.039771): 0.032736, 15: 0.253455): 0.026226): 0.088379, ((11: 0.651955, 21: 0.511367): 0.163231, 13: 0.494793): 0.076994): 0.405848, (12: 0.509460, 14: 0.637919): 0.174380): 0.453410, (6: 0.033240, 7: 0.045452): 0.723088): 0.212882, 10: 0.437396): 0.148726);

(D_rerio_2: 0.487899, (P_promelas_2: 0.142173, R_rutilus_2: 0.081350): 0.105793, ((((((((D_labrax_2: 0.195024, M_miiuy_2: 0.393639): 0.027496, (T_nigroviridis_2: 0.325098, T_rubripes_2: 0.319261): 0.514055): 0.037805, L_japonicus_2: 0.278324): 0.020562, (((D_mawsoni_2: 0.065370, H_antarcticus_2: 0.046915): 0.273129, (G_aculeatus_2: 0.474287, S_schlegelii_2: 0.407343): 0.039771): 0.032736, P_flavescens_2: 0.253455): 0.026226): 0.088379, ((O_latipes_2: 0.651955, X_hellerii_2: 0.511367): 0.163231, O_niloticus_2: 0.494793): 0.076994): 0.405848, (O_mykiss_2: 0.509460, P_altivelis_2: 0.637919): 0.174380): 0.453410, (I_furcatus_2: 0.033240, I_punctatus_2: 0.045452): 0.723088): 0.212882, M_mizolepis_2: 0.437396): 0.148726);

Detailed output identifying parameters

kappa (ts/tv) =  1.96926


dN/dS (w) for site classes (K=2)

p:   0.72442  0.27558
w:   0.09715  1.00000

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1       0.488    803.9    270.1   0.3460   0.1102   0.3186   88.6   86.1
  22..23      0.106    803.9    270.1   0.3460   0.0239   0.0691   19.2   18.7
  23..16      0.142    803.9    270.1   0.3460   0.0321   0.0928   25.8   25.1
  23..17      0.081    803.9    270.1   0.3460   0.0184   0.0531   14.8   14.3
  22..24      0.149    803.9    270.1   0.3460   0.0336   0.0971   27.0   26.2
  24..25      0.213    803.9    270.1   0.3460   0.0481   0.1390   38.7   37.5
  25..26      0.453    803.9    270.1   0.3460   0.1024   0.2961   82.3   80.0
  26..27      0.406    803.9    270.1   0.3460   0.0917   0.2650   73.7   71.6
  27..28      0.088    803.9    270.1   0.3460   0.0200   0.0577   16.1   15.6
  28..29      0.021    803.9    270.1   0.3460   0.0046   0.0134    3.7    3.6
  29..30      0.038    803.9    270.1   0.3460   0.0085   0.0247    6.9    6.7
  30..31      0.027    803.9    270.1   0.3460   0.0062   0.0180    5.0    4.8
  31..2       0.195    803.9    270.1   0.3460   0.0441   0.1274   35.4   34.4
  31..9       0.394    803.9    270.1   0.3460   0.0889   0.2571   71.5   69.4
  30..32      0.514    803.9    270.1   0.3460   0.1161   0.3357   93.4   90.7
  32..19      0.325    803.9    270.1   0.3460   0.0734   0.2123   59.0   57.3
  32..20      0.319    803.9    270.1   0.3460   0.0721   0.2085   58.0   56.3
  29..8       0.278    803.9    270.1   0.3460   0.0629   0.1818   50.5   49.1
  28..33      0.026    803.9    270.1   0.3460   0.0059   0.0171    4.8    4.6
  33..34      0.033    803.9    270.1   0.3460   0.0074   0.0214    5.9    5.8
  34..35      0.273    803.9    270.1   0.3460   0.0617   0.1784   49.6   48.2
  35..3       0.065    803.9    270.1   0.3460   0.0148   0.0427   11.9   11.5
  35..5       0.047    803.9    270.1   0.3460   0.0106   0.0306    8.5    8.3
  34..36      0.040    803.9    270.1   0.3460   0.0090   0.0260    7.2    7.0
  36..4       0.474    803.9    270.1   0.3460   0.1072   0.3097   86.1   83.7
  36..18      0.407    803.9    270.1   0.3460   0.0920   0.2660   74.0   71.8
  33..15      0.253    803.9    270.1   0.3460   0.0573   0.1655   46.0   44.7
  27..37      0.077    803.9    270.1   0.3460   0.0174   0.0503   14.0   13.6
  37..38      0.163    803.9    270.1   0.3460   0.0369   0.1066   29.6   28.8
  38..11      0.652    803.9    270.1   0.3460   0.1473   0.4258  118.4  115.0
  38..21      0.511    803.9    270.1   0.3460   0.1155   0.3339   92.9   90.2
  37..13      0.495    803.9    270.1   0.3460   0.1118   0.3231   89.9   87.3
  26..39      0.174    803.9    270.1   0.3460   0.0394   0.1139   31.7   30.8
  39..12      0.509    803.9    270.1   0.3460   0.1151   0.3327   92.5   89.9
  39..14      0.638    803.9    270.1   0.3460   0.1441   0.4166  115.9  112.5
  25..40      0.723    803.9    270.1   0.3460   0.1634   0.4722  131.3  127.5
  40..6       0.033    803.9    270.1   0.3460   0.0075   0.0217    6.0    5.9
  40..7       0.045    803.9    270.1   0.3460   0.0103   0.0297    8.3    8.0
  24..10      0.437    803.9    270.1   0.3460   0.0988   0.2856   79.4   77.1


Time used:  8:13


Model 2: PositiveSelection (3 categories)


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 44): -12054.964331      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.487899 0.105793 0.142173 0.081350 0.148726 0.212882 0.453410 0.405848 0.088379 0.020562 0.037805 0.027496 0.195024 0.393639 0.514055 0.325098 0.319261 0.278324 0.026226 0.032736 0.273129 0.065370 0.046915 0.039771 0.474287 0.407343 0.253455 0.076994 0.163231 0.651955 0.511367 0.494793 0.174380 0.509460 0.637919 0.723088 0.033240 0.045452 0.437396 1.969262 0.724422 0.234550 0.097148 1.000000
SEs for parameters:
 0.059107 0.032104 0.025311 0.021015 0.041929 0.060265 0.075315 0.069656 0.031746 0.014964 0.019606 0.017825 0.030710 0.045921 0.059707 0.049052 0.045639 0.035297 0.017237 0.017390 0.035593 0.016678 0.015161 0.022116 0.053918 0.048241 0.033487 0.030661 0.043300 0.069865 0.066568 0.057138 0.059177 0.074697 0.074426 0.084871 0.015058 0.017269 0.054806 0.085271 0.029670 577645869.289694 0.004886 0.281000

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =  10.31623

(1: 0.487899, (16: 0.142173, 17: 0.081350): 0.105793, ((((((((2: 0.195024, 9: 0.393639): 0.027496, (19: 0.325098, 20: 0.319261): 0.514055): 0.037805, 8: 0.278324): 0.020562, (((3: 0.065370, 5: 0.046915): 0.273129, (4: 0.474287, 18: 0.407343): 0.039771): 0.032736, 15: 0.253455): 0.026226): 0.088379, ((11: 0.651955, 21: 0.511367): 0.163231, 13: 0.494793): 0.076994): 0.405848, (12: 0.509460, 14: 0.637919): 0.174380): 0.453410, (6: 0.033240, 7: 0.045452): 0.723088): 0.212882, 10: 0.437396): 0.148726);

(D_rerio_2: 0.487899, (P_promelas_2: 0.142173, R_rutilus_2: 0.081350): 0.105793, ((((((((D_labrax_2: 0.195024, M_miiuy_2: 0.393639): 0.027496, (T_nigroviridis_2: 0.325098, T_rubripes_2: 0.319261): 0.514055): 0.037805, L_japonicus_2: 0.278324): 0.020562, (((D_mawsoni_2: 0.065370, H_antarcticus_2: 0.046915): 0.273129, (G_aculeatus_2: 0.474287, S_schlegelii_2: 0.407343): 0.039771): 0.032736, P_flavescens_2: 0.253455): 0.026226): 0.088379, ((O_latipes_2: 0.651955, X_hellerii_2: 0.511367): 0.163231, O_niloticus_2: 0.494793): 0.076994): 0.405848, (O_mykiss_2: 0.509460, P_altivelis_2: 0.637919): 0.174380): 0.453410, (I_furcatus_2: 0.033240, I_punctatus_2: 0.045452): 0.723088): 0.212882, M_mizolepis_2: 0.437396): 0.148726);

Detailed output identifying parameters

kappa (ts/tv) =  1.96926


dN/dS (w) for site classes (K=3)

p:   0.72442  0.23455  0.04103
w:   0.09715  1.00000  1.00000

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1       0.488    803.9    270.1   0.3460   0.1102   0.3186   88.6   86.1
  22..23      0.106    803.9    270.1   0.3460   0.0239   0.0691   19.2   18.7
  23..16      0.142    803.9    270.1   0.3460   0.0321   0.0928   25.8   25.1
  23..17      0.081    803.9    270.1   0.3460   0.0184   0.0531   14.8   14.3
  22..24      0.149    803.9    270.1   0.3460   0.0336   0.0971   27.0   26.2
  24..25      0.213    803.9    270.1   0.3460   0.0481   0.1390   38.7   37.5
  25..26      0.453    803.9    270.1   0.3460   0.1024   0.2961   82.3   80.0
  26..27      0.406    803.9    270.1   0.3460   0.0917   0.2650   73.7   71.6
  27..28      0.088    803.9    270.1   0.3460   0.0200   0.0577   16.1   15.6
  28..29      0.021    803.9    270.1   0.3460   0.0046   0.0134    3.7    3.6
  29..30      0.038    803.9    270.1   0.3460   0.0085   0.0247    6.9    6.7
  30..31      0.027    803.9    270.1   0.3460   0.0062   0.0180    5.0    4.8
  31..2       0.195    803.9    270.1   0.3460   0.0441   0.1274   35.4   34.4
  31..9       0.394    803.9    270.1   0.3460   0.0889   0.2571   71.5   69.4
  30..32      0.514    803.9    270.1   0.3460   0.1161   0.3357   93.4   90.7
  32..19      0.325    803.9    270.1   0.3460   0.0734   0.2123   59.0   57.3
  32..20      0.319    803.9    270.1   0.3460   0.0721   0.2085   58.0   56.3
  29..8       0.278    803.9    270.1   0.3460   0.0629   0.1818   50.5   49.1
  28..33      0.026    803.9    270.1   0.3460   0.0059   0.0171    4.8    4.6
  33..34      0.033    803.9    270.1   0.3460   0.0074   0.0214    5.9    5.8
  34..35      0.273    803.9    270.1   0.3460   0.0617   0.1784   49.6   48.2
  35..3       0.065    803.9    270.1   0.3460   0.0148   0.0427   11.9   11.5
  35..5       0.047    803.9    270.1   0.3460   0.0106   0.0306    8.5    8.3
  34..36      0.040    803.9    270.1   0.3460   0.0090   0.0260    7.2    7.0
  36..4       0.474    803.9    270.1   0.3460   0.1072   0.3097   86.1   83.7
  36..18      0.407    803.9    270.1   0.3460   0.0920   0.2660   74.0   71.8
  33..15      0.253    803.9    270.1   0.3460   0.0573   0.1655   46.0   44.7
  27..37      0.077    803.9    270.1   0.3460   0.0174   0.0503   14.0   13.6
  37..38      0.163    803.9    270.1   0.3460   0.0369   0.1066   29.6   28.8
  38..11      0.652    803.9    270.1   0.3460   0.1473   0.4258  118.4  115.0
  38..21      0.511    803.9    270.1   0.3460   0.1155   0.3339   92.9   90.2
  37..13      0.495    803.9    270.1   0.3460   0.1118   0.3231   89.9   87.3
  26..39      0.174    803.9    270.1   0.3460   0.0394   0.1139   31.7   30.8
  39..12      0.509    803.9    270.1   0.3460   0.1151   0.3327   92.5   89.9
  39..14      0.638    803.9    270.1   0.3460   0.1441   0.4166  115.9  112.5
  25..40      0.723    803.9    270.1   0.3460   0.1634   0.4722  131.3  127.5
  40..6       0.033    803.9    270.1   0.3460   0.0075   0.0217    6.0    5.9
  40..7       0.045    803.9    270.1   0.3460   0.0103   0.0297    8.3    8.0
  24..10      0.437    803.9    270.1   0.3460   0.0988   0.2856   79.4   77.1


Naive Empirical Bayes (NEB) analysis
Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_rerio_2)

            Pr(w>1)     post mean +- SE for w

   233 L      0.788         1.485 +- 0.492
   322 R      0.543         1.322 +- 0.393



The grid (see ternary graph for p0-p1)

w0:   0.050  0.150  0.250  0.350  0.450  0.550  0.650  0.750  0.850  0.950
w2:   1.500  2.500  3.500  4.500  5.500  6.500  7.500  8.500  9.500 10.500


Posterior on the grid

w0:   0.000  1.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000
w2:   0.935  0.048  0.010  0.004  0.002  0.001  0.000  0.000  0.000  0.000

Posterior for p0-p1 (see the ternary graph)

 0.000
 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.981
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.017 0.002
 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000

sum of density on p0-p1 =   1.000000

Time used: 14:03


Model 3: discrete (3 categories)


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 45): -11969.229249      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.494106 0.110220 0.144385 0.079758 0.146650 0.231406 0.460854 0.415589 0.093482 0.020530 0.039113 0.025976 0.195580 0.396065 0.525851 0.328943 0.319407 0.275675 0.028600 0.033317 0.271689 0.065375 0.046876 0.040129 0.477110 0.409646 0.251823 0.071372 0.160838 0.668320 0.520741 0.506221 0.177340 0.518149 0.650550 0.733820 0.034135 0.044715 0.443317 1.840397 0.434301 0.359216 0.020743 0.227066 0.845166
SEs for parameters:
 0.058345 0.033714 0.025730 0.021064 0.042723 0.062362 0.077877 0.071790 0.032809 0.015047 0.019640 0.017176 0.030321 0.045030 0.059653 0.049135 0.045672 0.035240 0.017421 0.017397 0.034662 0.016672 0.015263 0.022516 0.053099 0.047696 0.032806 0.031633 0.044951 0.071738 0.066696 0.056207 0.062104 0.076111 0.073999 0.085154 0.015464 0.017487 0.054626 0.079747 0.037466 0.037797 0.004638 0.021134 0.052188

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =  10.45767

(1: 0.494106, (16: 0.144385, 17: 0.079758): 0.110220, ((((((((2: 0.195580, 9: 0.396065): 0.025976, (19: 0.328943, 20: 0.319407): 0.525851): 0.039113, 8: 0.275675): 0.020530, (((3: 0.065375, 5: 0.046876): 0.271689, (4: 0.477110, 18: 0.409646): 0.040129): 0.033317, 15: 0.251823): 0.028600): 0.093482, ((11: 0.668320, 21: 0.520741): 0.160838, 13: 0.506221): 0.071372): 0.415589, (12: 0.518149, 14: 0.650550): 0.177340): 0.460854, (6: 0.034135, 7: 0.044715): 0.733820): 0.231406, 10: 0.443317): 0.146650);

(D_rerio_2: 0.494106, (P_promelas_2: 0.144385, R_rutilus_2: 0.079758): 0.110220, ((((((((D_labrax_2: 0.195580, M_miiuy_2: 0.396065): 0.025976, (T_nigroviridis_2: 0.328943, T_rubripes_2: 0.319407): 0.525851): 0.039113, L_japonicus_2: 0.275675): 0.020530, (((D_mawsoni_2: 0.065375, H_antarcticus_2: 0.046876): 0.271689, (G_aculeatus_2: 0.477110, S_schlegelii_2: 0.409646): 0.040129): 0.033317, P_flavescens_2: 0.251823): 0.028600): 0.093482, ((O_latipes_2: 0.668320, X_hellerii_2: 0.520741): 0.160838, O_niloticus_2: 0.506221): 0.071372): 0.415589, (O_mykiss_2: 0.518149, P_altivelis_2: 0.650550): 0.177340): 0.460854, (I_furcatus_2: 0.034135, I_punctatus_2: 0.044715): 0.733820): 0.231406, M_mizolepis_2: 0.443317): 0.146650);

Detailed output identifying parameters

kappa (ts/tv) =  1.84040


dN/dS (w) for site classes (K=3)

p:   0.43430  0.35922  0.20648
w:   0.02074  0.22707  0.84517

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1       0.494    807.7    266.3   0.2651   0.0976   0.3682   78.8   98.1
  22..23      0.110    807.7    266.3   0.2651   0.0218   0.0821   17.6   21.9
  23..16      0.144    807.7    266.3   0.2651   0.0285   0.1076   23.0   28.7
  23..17      0.080    807.7    266.3   0.2651   0.0158   0.0594   12.7   15.8
  22..24      0.147    807.7    266.3   0.2651   0.0290   0.1093   23.4   29.1
  24..25      0.231    807.7    266.3   0.2651   0.0457   0.1724   36.9   45.9
  25..26      0.461    807.7    266.3   0.2651   0.0910   0.3434   73.5   91.5
  26..27      0.416    807.7    266.3   0.2651   0.0821   0.3097   66.3   82.5
  27..28      0.093    807.7    266.3   0.2651   0.0185   0.0697   14.9   18.6
  28..29      0.021    807.7    266.3   0.2651   0.0041   0.0153    3.3    4.1
  29..30      0.039    807.7    266.3   0.2651   0.0077   0.0291    6.2    7.8
  30..31      0.026    807.7    266.3   0.2651   0.0051   0.0194    4.1    5.2
  31..2       0.196    807.7    266.3   0.2651   0.0386   0.1457   31.2   38.8
  31..9       0.396    807.7    266.3   0.2651   0.0782   0.2951   63.2   78.6
  30..32      0.526    807.7    266.3   0.2651   0.1039   0.3919   83.9  104.4
  32..19      0.329    807.7    266.3   0.2651   0.0650   0.2451   52.5   65.3
  32..20      0.319    807.7    266.3   0.2651   0.0631   0.2380   51.0   63.4
  29..8       0.276    807.7    266.3   0.2651   0.0545   0.2054   44.0   54.7
  28..33      0.029    807.7    266.3   0.2651   0.0056   0.0213    4.6    5.7
  33..34      0.033    807.7    266.3   0.2651   0.0066   0.0248    5.3    6.6
  34..35      0.272    807.7    266.3   0.2651   0.0537   0.2025   43.4   53.9
  35..3       0.065    807.7    266.3   0.2651   0.0129   0.0487   10.4   13.0
  35..5       0.047    807.7    266.3   0.2651   0.0093   0.0349    7.5    9.3
  34..36      0.040    807.7    266.3   0.2651   0.0079   0.0299    6.4    8.0
  36..4       0.477    807.7    266.3   0.2651   0.0943   0.3555   76.1   94.7
  36..18      0.410    807.7    266.3   0.2651   0.0809   0.3053   65.4   81.3
  33..15      0.252    807.7    266.3   0.2651   0.0497   0.1877   40.2   50.0
  27..37      0.071    807.7    266.3   0.2651   0.0141   0.0532   11.4   14.2
  37..38      0.161    807.7    266.3   0.2651   0.0318   0.1199   25.7   31.9
  38..11      0.668    807.7    266.3   0.2651   0.1320   0.4980  106.6  132.6
  38..21      0.521    807.7    266.3   0.2651   0.1029   0.3881   83.1  103.3
  37..13      0.506    807.7    266.3   0.2651   0.1000   0.3772   80.8  100.5
  26..39      0.177    807.7    266.3   0.2651   0.0350   0.1322   28.3   35.2
  39..12      0.518    807.7    266.3   0.2651   0.1024   0.3861   82.7  102.8
  39..14      0.651    807.7    266.3   0.2651   0.1285   0.4848  103.8  129.1
  25..40      0.734    807.7    266.3   0.2651   0.1450   0.5468  117.1  145.6
  40..6       0.034    807.7    266.3   0.2651   0.0067   0.0254    5.4    6.8
  40..7       0.045    807.7    266.3   0.2651   0.0088   0.0333    7.1    8.9
  24..10      0.443    807.7    266.3   0.2651   0.0876   0.3304   70.7   88.0


Naive Empirical Bayes (NEB) analysis
Time used: 19:24


Model 7: beta (10 categories)


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 42): -11970.712573      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.502763 0.110550 0.146751 0.081055 0.148981 0.235651 0.466460 0.426517 0.095826 0.018908 0.041058 0.024986 0.198899 0.402274 0.533108 0.331605 0.324746 0.280753 0.030115 0.034274 0.275787 0.066293 0.047643 0.040019 0.484929 0.417472 0.255637 0.070935 0.163244 0.679141 0.527598 0.513123 0.177924 0.524147 0.661494 0.744375 0.034142 0.046102 0.451326 1.817876 0.342779 0.966820
SEs for parameters:
 0.058530 0.033906 0.025866 0.021195 0.043806 0.063532 0.078902 0.072869 0.033351 0.015048 0.020051 0.017293 0.030509 0.044629 0.059249 0.048954 0.045873 0.035330 0.017877 0.017736 0.034908 0.016835 0.015287 0.022676 0.052876 0.048222 0.033227 0.031852 0.045365 0.071615 0.066459 0.055561 0.062331 0.076398 0.074079 0.086160 0.015540 0.017700 0.054860 0.078545 0.035543 0.135107

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =  10.61661

(1: 0.502763, (16: 0.146751, 17: 0.081055): 0.110550, ((((((((2: 0.198899, 9: 0.402274): 0.024986, (19: 0.331605, 20: 0.324746): 0.533108): 0.041058, 8: 0.280753): 0.018908, (((3: 0.066293, 5: 0.047643): 0.275787, (4: 0.484929, 18: 0.417472): 0.040019): 0.034274, 15: 0.255637): 0.030115): 0.095826, ((11: 0.679141, 21: 0.527598): 0.163244, 13: 0.513123): 0.070935): 0.426517, (12: 0.524147, 14: 0.661494): 0.177924): 0.466460, (6: 0.034142, 7: 0.046102): 0.744375): 0.235651, 10: 0.451326): 0.148981);

(D_rerio_2: 0.502763, (P_promelas_2: 0.146751, R_rutilus_2: 0.081055): 0.110550, ((((((((D_labrax_2: 0.198899, M_miiuy_2: 0.402274): 0.024986, (T_nigroviridis_2: 0.331605, T_rubripes_2: 0.324746): 0.533108): 0.041058, L_japonicus_2: 0.280753): 0.018908, (((D_mawsoni_2: 0.066293, H_antarcticus_2: 0.047643): 0.275787, (G_aculeatus_2: 0.484929, S_schlegelii_2: 0.417472): 0.040019): 0.034274, P_flavescens_2: 0.255637): 0.030115): 0.095826, ((O_latipes_2: 0.679141, X_hellerii_2: 0.527598): 0.163244, O_niloticus_2: 0.513123): 0.070935): 0.426517, (O_mykiss_2: 0.524147, P_altivelis_2: 0.661494): 0.177924): 0.466460, (I_furcatus_2: 0.034142, I_punctatus_2: 0.046102): 0.744375): 0.235651, M_mizolepis_2: 0.451326): 0.148981);

Detailed output identifying parameters

kappa (ts/tv) =  1.81788

Parameters in M7 (beta):
 p=  0.34278  q=  0.96682


dN/dS (w) for site classes (K=10)

p:   0.10000  0.10000  0.10000  0.10000  0.10000  0.10000  0.10000  0.10000  0.10000  0.10000
w:   0.00017  0.00413  0.01832  0.04886  0.10156  0.18198  0.29530  0.44614  0.63808  0.87193

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1       0.503    808.4    265.6   0.2606   0.0985   0.3779   79.6  100.4
  22..23      0.111    808.4    265.6   0.2606   0.0217   0.0831   17.5   22.1
  23..16      0.147    808.4    265.6   0.2606   0.0287   0.1103   23.2   29.3
  23..17      0.081    808.4    265.6   0.2606   0.0159   0.0609   12.8   16.2
  22..24      0.149    808.4    265.6   0.2606   0.0292   0.1120   23.6   29.7
  24..25      0.236    808.4    265.6   0.2606   0.0462   0.1771   37.3   47.0
  25..26      0.466    808.4    265.6   0.2606   0.0914   0.3506   73.9   93.1
  26..27      0.427    808.4    265.6   0.2606   0.0836   0.3206   67.5   85.1
  27..28      0.096    808.4    265.6   0.2606   0.0188   0.0720   15.2   19.1
  28..29      0.019    808.4    265.6   0.2606   0.0037   0.0142    3.0    3.8
  29..30      0.041    808.4    265.6   0.2606   0.0080   0.0309    6.5    8.2
  30..31      0.025    808.4    265.6   0.2606   0.0049   0.0188    4.0    5.0
  31..2       0.199    808.4    265.6   0.2606   0.0390   0.1495   31.5   39.7
  31..9       0.402    808.4    265.6   0.2606   0.0788   0.3024   63.7   80.3
  30..32      0.533    808.4    265.6   0.2606   0.1044   0.4007   84.4  106.4
  32..19      0.332    808.4    265.6   0.2606   0.0650   0.2492   52.5   66.2
  32..20      0.325    808.4    265.6   0.2606   0.0636   0.2441   51.4   64.8
  29..8       0.281    808.4    265.6   0.2606   0.0550   0.2110   44.5   56.0
  28..33      0.030    808.4    265.6   0.2606   0.0059   0.0226    4.8    6.0
  33..34      0.034    808.4    265.6   0.2606   0.0067   0.0258    5.4    6.8
  34..35      0.276    808.4    265.6   0.2606   0.0540   0.2073   43.7   55.1
  35..3       0.066    808.4    265.6   0.2606   0.0130   0.0498   10.5   13.2
  35..5       0.048    808.4    265.6   0.2606   0.0093   0.0358    7.5    9.5
  34..36      0.040    808.4    265.6   0.2606   0.0078   0.0301    6.3    8.0
  36..4       0.485    808.4    265.6   0.2606   0.0950   0.3645   76.8   96.8
  36..18      0.417    808.4    265.6   0.2606   0.0818   0.3138   66.1   83.3
  33..15      0.256    808.4    265.6   0.2606   0.0501   0.1921   40.5   51.0
  27..37      0.071    808.4    265.6   0.2606   0.0139   0.0533   11.2   14.2
  37..38      0.163    808.4    265.6   0.2606   0.0320   0.1227   25.9   32.6
  38..11      0.679    808.4    265.6   0.2606   0.1330   0.5105  107.6  135.6
  38..21      0.528    808.4    265.6   0.2606   0.1034   0.3965   83.6  105.3
  37..13      0.513    808.4    265.6   0.2606   0.1005   0.3857   81.3  102.4
  26..39      0.178    808.4    265.6   0.2606   0.0349   0.1337   28.2   35.5
  39..12      0.524    808.4    265.6   0.2606   0.1027   0.3940   83.0  104.6
  39..14      0.661    808.4    265.6   0.2606   0.1296   0.4972  104.8  132.1
  25..40      0.744    808.4    265.6   0.2606   0.1458   0.5595  117.9  148.6
  40..6       0.034    808.4    265.6   0.2606   0.0067   0.0257    5.4    6.8
  40..7       0.046    808.4    265.6   0.2606   0.0090   0.0347    7.3    9.2
  24..10      0.451    808.4    265.6   0.2606   0.0884   0.3392   71.5   90.1


Time used: 39:51


Model 8: beta&w>1 (11 categories)


TREE #  1:  (1, (16, 17), ((((((((2, 9), (19, 20)), 8), (((3, 5), (4, 18)), 15)), ((11, 21), 13)), (12, 14)), (6, 7)), 10));   MP score: 2249
lnL(ntime: 39  np: 44): -11964.581623      +0.000000
  22..1    22..23   23..16   23..17   22..24   24..25   25..26   26..27   27..28   28..29   29..30   30..31   31..2    31..9    30..32   32..19   32..20   29..8    28..33   33..34   34..35   35..3    35..5    34..36   36..4    36..18   33..15   27..37   37..38   38..11   38..21   37..13   26..39   39..12   39..14   25..40   40..6    40..7    24..10 
 0.496717 0.109496 0.144416 0.080352 0.146223 0.225318 0.468343 0.420831 0.095036 0.020011 0.039630 0.025508 0.196050 0.397359 0.526159 0.327950 0.321034 0.276946 0.029023 0.032643 0.273597 0.065465 0.046944 0.039547 0.479843 0.412129 0.252757 0.069309 0.160677 0.673354 0.523297 0.507677 0.176724 0.519993 0.657891 0.742712 0.033996 0.045059 0.446585 1.847044 0.873800 0.475145 2.398437 1.009947
SEs for parameters:
 0.059574 0.033827 0.025734 0.021339 0.043306 0.062801 0.079487 0.072949 0.033265 0.015155 0.019769 0.017311 0.030585 0.045651 0.060048 0.049495 0.045931 0.035099 0.017672 0.017268 0.034999 0.016756 0.015377 0.022302 0.053887 0.047968 0.033061 0.031423 0.045129 0.074461 0.067107 0.056505 0.062726 0.077295 0.075982 0.087449 0.015412 0.017549 0.055350 0.080208 0.041869 0.077749 0.822179 0.117859

Note: Branch length is defined as number of nucleotide substitutions per codon (not per neucleotide site).

tree length =  10.50660

(1: 0.496717, (16: 0.144416, 17: 0.080352): 0.109496, ((((((((2: 0.196050, 9: 0.397359): 0.025508, (19: 0.327950, 20: 0.321034): 0.526159): 0.039630, 8: 0.276946): 0.020011, (((3: 0.065465, 5: 0.046944): 0.273597, (4: 0.479843, 18: 0.412129): 0.039547): 0.032643, 15: 0.252757): 0.029023): 0.095036, ((11: 0.673354, 21: 0.523297): 0.160677, 13: 0.507677): 0.069309): 0.420831, (12: 0.519993, 14: 0.657891): 0.176724): 0.468343, (6: 0.033996, 7: 0.045059): 0.742712): 0.225318, 10: 0.446585): 0.146223);

(D_rerio_2: 0.496717, (P_promelas_2: 0.144416, R_rutilus_2: 0.080352): 0.109496, ((((((((D_labrax_2: 0.196050, M_miiuy_2: 0.397359): 0.025508, (T_nigroviridis_2: 0.327950, T_rubripes_2: 0.321034): 0.526159): 0.039630, L_japonicus_2: 0.276946): 0.020011, (((D_mawsoni_2: 0.065465, H_antarcticus_2: 0.046944): 0.273597, (G_aculeatus_2: 0.479843, S_schlegelii_2: 0.412129): 0.039547): 0.032643, P_flavescens_2: 0.252757): 0.029023): 0.095036, ((O_latipes_2: 0.673354, X_hellerii_2: 0.523297): 0.160677, O_niloticus_2: 0.507677): 0.069309): 0.420831, (O_mykiss_2: 0.519993, P_altivelis_2: 0.657891): 0.176724): 0.468343, (I_furcatus_2: 0.033996, I_punctatus_2: 0.045059): 0.742712): 0.225318, M_mizolepis_2: 0.446585): 0.146223);

Detailed output identifying parameters

kappa (ts/tv) =  1.84704

Parameters in M8 (beta&w>1):
  p0=  0.87380  p=  0.47515 q=  2.39844
 (p1=  0.12620) w=  1.00995


dN/dS (w) for site classes (K=11)

p:   0.08738  0.08738  0.08738  0.08738  0.08738  0.08738  0.08738  0.08738  0.08738  0.08738  0.12620
w:   0.00066  0.00669  0.01984  0.04111  0.07185  0.11418  0.17166  0.25092  0.36712  0.57557  1.00995

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  22..1       0.497    807.5    266.5   0.2690   0.0989   0.3676   79.9   98.0
  22..23      0.109    807.5    266.5   0.2690   0.0218   0.0810   17.6   21.6
  23..16      0.144    807.5    266.5   0.2690   0.0288   0.1069   23.2   28.5
  23..17      0.080    807.5    266.5   0.2690   0.0160   0.0595   12.9   15.8
  22..24      0.146    807.5    266.5   0.2690   0.0291   0.1082   23.5   28.8
  24..25      0.225    807.5    266.5   0.2690   0.0449   0.1668   36.2   44.4
  25..26      0.468    807.5    266.5   0.2690   0.0932   0.3466   75.3   92.4
  26..27      0.421    807.5    266.5   0.2690   0.0838   0.3115   67.7   83.0
  27..28      0.095    807.5    266.5   0.2690   0.0189   0.0703   15.3   18.7
  28..29      0.020    807.5    266.5   0.2690   0.0040   0.0148    3.2    3.9
  29..30      0.040    807.5    266.5   0.2690   0.0079   0.0293    6.4    7.8
  30..31      0.026    807.5    266.5   0.2690   0.0051   0.0189    4.1    5.0
  31..2       0.196    807.5    266.5   0.2690   0.0390   0.1451   31.5   38.7
  31..9       0.397    807.5    266.5   0.2690   0.0791   0.2941   63.9   78.4
  30..32      0.526    807.5    266.5   0.2690   0.1047   0.3894   84.6  103.8
  32..19      0.328    807.5    266.5   0.2690   0.0653   0.2427   52.7   64.7
  32..20      0.321    807.5    266.5   0.2690   0.0639   0.2376   51.6   63.3
  29..8       0.277    807.5    266.5   0.2690   0.0551   0.2050   44.5   54.6
  28..33      0.029    807.5    266.5   0.2690   0.0058   0.0215    4.7    5.7
  33..34      0.033    807.5    266.5   0.2690   0.0065   0.0242    5.2    6.4
  34..35      0.274    807.5    266.5   0.2690   0.0545   0.2025   44.0   54.0
  35..3       0.065    807.5    266.5   0.2690   0.0130   0.0485   10.5   12.9
  35..5       0.047    807.5    266.5   0.2690   0.0093   0.0347    7.5    9.3
  34..36      0.040    807.5    266.5   0.2690   0.0079   0.0293    6.4    7.8
  36..4       0.480    807.5    266.5   0.2690   0.0955   0.3551   77.1   94.6
  36..18      0.412    807.5    266.5   0.2690   0.0820   0.3050   66.3   81.3
  33..15      0.253    807.5    266.5   0.2690   0.0503   0.1871   40.6   49.9
  27..37      0.069    807.5    266.5   0.2690   0.0138   0.0513   11.1   13.7
  37..38      0.161    807.5    266.5   0.2690   0.0320   0.1189   25.8   31.7
  38..11      0.673    807.5    266.5   0.2690   0.1341   0.4984  108.2  132.8
  38..21      0.523    807.5    266.5   0.2690   0.1042   0.3873   84.1  103.2
  37..13      0.508    807.5    266.5   0.2690   0.1011   0.3757   81.6  100.1
  26..39      0.177    807.5    266.5   0.2690   0.0352   0.1308   28.4   34.9
  39..12      0.520    807.5    266.5   0.2690   0.1035   0.3849   83.6  102.6
  39..14      0.658    807.5    266.5   0.2690   0.1310   0.4869  105.8  129.8
  25..40      0.743    807.5    266.5   0.2690   0.1479   0.5497  119.4  146.5
  40..6       0.034    807.5    266.5   0.2690   0.0068   0.0252    5.5    6.7
  40..7       0.045    807.5    266.5   0.2690   0.0090   0.0333    7.2    8.9
  24..10      0.447    807.5    266.5   0.2690   0.0889   0.3305   71.8   88.1


Naive Empirical Bayes (NEB) analysis
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_rerio_2)

            Pr(w>1)     post mean +- SE for w

     2 A      0.943         0.985
     4 H      0.701         0.868
     5 E      0.549         0.785
     9 K      0.842         0.938
    37 T      0.916         0.973
    39 A      0.756         0.894
    45 S      0.659         0.853
    46 V      0.825         0.931
   117 N      0.741         0.892
   121 S      0.530         0.784
   125 K      0.860         0.947
   139 N      0.914         0.972
   169 T      0.569         0.807
   171 N      0.927         0.978
   178 N      0.962*        0.993
   182 R      0.832         0.934
   190 A      0.962*        0.993
   191 R      0.695         0.869
   192 K      0.941         0.984
   193 L      0.884         0.958
   205 R      0.918         0.973
   208 M      0.961*        0.993
   212 Q      0.879         0.955
   214 V      0.763         0.901
   225 S      0.848         0.942
   233 L      0.996**       1.008
   239 G      0.941         0.984
   248 G      0.862         0.948
   263 S      0.726         0.880
   294 Q      0.762         0.902
   295 Q      0.956*        0.991
   304 Q      0.980*        1.001
   307 Y      0.797         0.917
   317 T      0.734         0.888
   320 T      0.926         0.977
   322 R      0.985*        1.003
   327 A      0.766         0.903
   333 F      0.820         0.928
   336 A      0.888         0.960
   346 E      0.666         0.856
   349 S      0.896         0.964
   355 L      0.848         0.941
   358 M      0.942         0.984


Bayes Empirical Bayes (BEB) analysis (Yang, Wong & Nielsen 2005. Mol. Biol. Evol. 22:1107-1118)
Positively selected sites (*: P>95%; **: P>99%)
(amino acids refer to 1st sequence: D_rerio_2)

            Pr(w>1)     post mean +- SE for w

     2 A      0.550         1.196 +- 0.347
   178 N      0.564         1.212 +- 0.337
   190 A      0.680         1.288 +- 0.316
   208 M      0.585         1.225 +- 0.335
   233 L      0.967*        1.480 +- 0.111
   239 G      0.512         1.170 +- 0.350
   295 Q      0.530         1.187 +- 0.342
   304 Q      0.699         1.307 +- 0.300
   320 T      0.531         1.177 +- 0.355
   322 R      0.866         1.415 +- 0.219



The grid 

p0:   0.050  0.150  0.250  0.350  0.450  0.550  0.650  0.750  0.850  0.950
p :   0.100  0.300  0.500  0.700  0.900  1.100  1.300  1.500  1.700  1.900
q :   0.100  0.300  0.500  0.700  0.900  1.100  1.300  1.500  1.700  1.900
ws:   1.500  2.500  3.500  4.500  5.500  6.500  7.500  8.500  9.500 10.500


Posterior on the grid

p0:   0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000  1.000
p :   0.000  0.999  0.001  0.000  0.000  0.000  0.000  0.000  0.000  0.000
q :   0.000  0.000  0.000  0.000  0.201  0.673  0.121  0.004  0.001  0.001
ws:   1.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000  0.000

Time used: 1:03:38
