Name	Replicon Accession	Start	Stop	Strand	GeneID	Locus	Locus tag	Protein product	Length	Protein name
3R	NT_033777.3	835378	2532857	+	26067052	Myo81F	Dmel_CG45784	NP_001303492.1	2082	myosin 81F
3R	NT_033777.3	2554162	3263573	-	26067051	Pzl	Dmel_CG45783	NP_001303493.1	2326	Piezo-like, partial
3R	NT_033777.3	3322810	3354381	+	5740359	spok	Dmel_CG41624	NP_001104460.2	553	spookier
3R	NT_033777.3	3461403	3586979	-	3355109	Parp	Dmel_CG40411	NP_001104452.1	994	Poly-(ADP-ribose) polymerase
3R	NT_033777.3	3623217	3627011	+	3355106	Alg-2	Dmel_CG40410	NP_001104459.2	178	Apoptosis-linked gene-2
3R	NT_033777.3	3735023	3745035	+	3355107	Tim17b	Dmel_CG40451	NP_001015401.1	173	translocase of the inner mitochondrial membrane 17b, isoform A
3R	NT_033777.3	3735023	3745035	+	3355107	Tim17b	Dmel_CG40451	NP_001287641.1	173	translocase of the inner mitochondrial membrane 17b, isoform B
3R	NT_033777.3	3750458	3752303	+	3355108	CG41128	Dmel_CG41128	NP_001015402.3	72	uncharacterized protein Dmel_CG41128
3R	NT_033777.3	3846891	3867638	+	3355072	CG41099	Dmel_CG41099	NP_001104451.1	1122	uncharacterized protein Dmel_CG41099, isoform D
3R	NT_033777.3	3846902	3867638	+	3355072	CG41099	Dmel_CG41099	NP_001015359.1	1124	uncharacterized protein Dmel_CG41099, isoform C
3R	NT_033777.3	3849528	3867638	+	3355072	CG41099	Dmel_CG41099	NP_001015360.1	1111	uncharacterized protein Dmel_CG41099, isoform B
3R	NT_033777.3	3849528	3867638	+	3355072	CG41099	Dmel_CG41099	NP_001104450.2	1111	uncharacterized protein Dmel_CG41099, isoform E
3R	NT_033777.3	4081690	4102831	+	7354470	CG42402	Dmel_CG42402	NP_001287642.1	747	uncharacterized protein Dmel_CG42402, isoform E
3R	NT_033777.3	4085479	4102831	+	7354470	CG42402	Dmel_CG42402	NP_001137538.2	737	uncharacterized protein Dmel_CG42402, isoform C
3R	NT_033777.3	4085479	4102831	+	7354470	CG42402	Dmel_CG42402	NP_001263172.1	737	uncharacterized protein Dmel_CG42402, isoform D
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015161.2	665	Glutamine:fructose-6-phosphate aminotransferase 1, isoform M
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015160.2	682	Glutamine:fructose-6-phosphate aminotransferase 1, isoform L
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001104465.1	685	Glutamine:fructose-6-phosphate aminotransferase 1, isoform H
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001188369.1	694	Glutamine:fructose-6-phosphate aminotransferase 1, isoform N
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015158.1	673	Glutamine:fructose-6-phosphate aminotransferase 1, isoform D
3R	NT_033777.3	4132920	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015157.2	694	Glutamine:fructose-6-phosphate aminotransferase 1, isoform A
3R	NT_033777.3	4133365	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001188368.1	643	Glutamine:fructose-6-phosphate aminotransferase 1, isoform J
3R	NT_033777.3	4135115	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015159.2	493	Glutamine:fructose-6-phosphate aminotransferase 1, isoform K
3R	NT_033777.3	4135292	4137694	+	3354921	Gfat1	Dmel_CG12449	NP_001015162.1	434	Glutamine:fructose-6-phosphate aminotransferase 1, isoform F
3R	NT_033777.3	4161594	4162207	-	3354922	CG40198	Dmel_CG40198	NP_001015164.3	184	uncharacterized protein Dmel_CG40198, isoform B
3R	NT_033777.3	4161594	4162207	-	3354922	CG40198	Dmel_CG40198	NP_001263173.1	184	uncharacterized protein Dmel_CG40198, isoform C
3R	NT_033777.3	4175393	4184049	+	40522	CG12581	Dmel_CG12581	NP_649435.2	665	uncharacterized protein Dmel_CG12581, isoform A
3R	NT_033777.3	4175393	4184049	+	40522	CG12581	Dmel_CG12581	NP_730781.1	665	uncharacterized protein Dmel_CG12581, isoform B
3R	NT_033777.3	4189808	4190233	-	45845	Dsk	Dmel_CG18090	NP_524845.2	141	drosulfakinin
3R	NT_033777.3	4197415	4204473	+	40524	beta-Man	Dmel_CG12582	NP_649436.2	908	beta-Mannosidase, isoform A
3R	NT_033777.3	4197415	4204473	+	40524	beta-Man	Dmel_CG12582	NP_001246899.1	908	beta-Mannosidase, isoform D
3R	NT_033777.3	4197415	4204473	+	40524	beta-Man	Dmel_CG12582	NP_001262242.1	906	beta-Mannosidase, isoform H
3R	NT_033777.3	4198366	4204473	+	40524	beta-Man	Dmel_CG12582	NP_001262241.1	778	beta-Mannosidase, isoform G
3R	NT_033777.3	4198366	4204473	+	40524	beta-Man	Dmel_CG12582	NP_730783.3	778	beta-Mannosidase, isoform F
3R	NT_033777.3	4204596	4205765	-	40526	CG14636	Dmel_CG14636	NP_001036655.1	389	uncharacterized protein Dmel_CG14636, isoform B
3R	NT_033777.3	4204596	4205765	-	40526	CG14636	Dmel_CG14636	NP_649437.2	389	uncharacterized protein Dmel_CG14636, isoform A
3R	NT_033777.3	4218950	4219696	-	318776	CG31516	Dmel_CG31516	NP_730784.1	248	uncharacterized protein Dmel_CG31516
3R	NT_033777.3	4221143	4226861	+	40527	aux	Dmel_CG1107	NP_001262243.1	1153	auxilin, isoform C
3R	NT_033777.3	4221143	4226861	+	40527	aux	Dmel_CG1107	NP_649438.1	1165	auxilin, isoform B
3R	NT_033777.3	4221143	4226861	+	40527	aux	Dmel_CG1107	NP_730785.1	1165	auxilin, isoform A
3R	NT_033777.3	4221143	4226861	+	40527	aux	Dmel_CG1107	NP_001262244.1	1157	auxilin, isoform D
3R	NT_033777.3	4227535	4229143	-	40528	DhpD	Dmel_CG18143	NP_649439.1	448	dihydropterin deaminase
3R	NT_033777.3	4230986	4232242	-	40529	CG14641	Dmel_CG14641	NP_649440.3	418	uncharacterized protein Dmel_CG14641
3R	NT_033777.3	4233129	4234988	+	40530	abs	Dmel_CG14637	NP_524220.1	619	abstrakt
3R	NT_033777.3	4236764	4240937	+	46008	Gel	Dmel_CG1106	NP_524865.2	798	gelsolin, isoform B
3R	NT_033777.3	4236764	4240937	+	46008	Gel	Dmel_CG1106	NP_730790.2	798	gelsolin, isoform D
3R	NT_033777.3	4236764	4240937	+	46008	Gel	Dmel_CG1106	NP_996149.3	798	gelsolin, isoform J
3R	NT_033777.3	4236764	4240937	+	46008	Gel	Dmel_CG1106	NP_788571.1	798	gelsolin, isoform F
3R	NT_033777.3	4237206	4240937	+	46008	Gel	Dmel_CG1106	NP_996148.2	786	gelsolin, isoform K
3R	NT_033777.3	4237758	4240937	+	46008	Gel	Dmel_CG1106	NP_001036657.2	740	gelsolin, isoform L
3R	NT_033777.3	4237758	4240937	+	46008	Gel	Dmel_CG1106	NP_730788.1	740	gelsolin, isoform A
3R	NT_033777.3	4241269	4242695	-	40532	CG14642	Dmel_CG14642	NP_001246901.1	392	uncharacterized protein Dmel_CG14642, isoform C
3R	NT_033777.3	4241269	4242695	-	40532	CG14642	Dmel_CG14642	NP_730791.1	392	uncharacterized protein Dmel_CG14642, isoform B
3R	NT_033777.3	4241884	4242695	-	40532	CG14642	Dmel_CG14642	NP_649441.1	200	uncharacterized protein Dmel_CG14642, isoform A
3R	NT_033777.3	4242835	4243136	-	5740825	CG34305	Dmel_CG34305	NP_001097671.1	79	uncharacterized protein Dmel_CG34305
3R	NT_033777.3	4247061	4248184	+	40534	TwdlF	Dmel_CG14639	NP_649443.1	354	TweedleF
3R	NT_033777.3	4248851	4249921	-	40535	TwdlG	Dmel_CG14643	NP_001287155.1	278	TweedleG, isoform C
3R	NT_033777.3	4248851	4249921	-	40535	TwdlG	Dmel_CG14643	NP_649444.1	278	TweedleG, isoform A
3R	NT_033777.3	4248851	4249921	-	40535	TwdlG	Dmel_CG14643	NP_001262245.1	278	TweedleG, isoform B
3R	NT_033777.3	4251978	4252975	-	40536	CG14644	Dmel_CG14644	NP_649445.3	293	uncharacterized protein Dmel_CG14644, isoform A
3R	NT_033777.3	4251978	4252710	-	40536	CG14644	Dmel_CG14644	NP_001262246.1	225	uncharacterized protein Dmel_CG14644, isoform B
3R	NT_033777.3	4254780	4255594	+	40537	TwdlV	Dmel_CG14640	NP_649446.1	251	TweedleV
3R	NT_033777.3	4256972	4258444	+	318778	Or82a	Dmel_CG31519	NP_730794.1	385	odorant receptor 82a
3R	NT_033777.3	4266974	4268213	+	40538	CG1092	Dmel_CG1092	NP_730797.2	394	CG1092, isoform C
3R	NT_033777.3	4266974	4268213	+	40538	CG1092	Dmel_CG1092	NP_649447.5	394	CG1092, isoform D
3R	NT_033777.3	4269565	4277793	-	40539	CG9766	Dmel_CG9766	NP_001097672.1	340	CG9766
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001097674.1	139	complexin, isoform M
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163504.1	143	complexin, isoform Y
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163501.1	142	complexin, isoform V
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_730803.1	139	complexin, isoform C
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_730804.2	142	complexin, isoform H
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_730800.1	142	complexin, isoform A
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163500.1	143	complexin, isoform U
3R	NT_033777.3	4284352	4295819	+	64877	cpx	Dmel_CG32490	NP_001262248.1	157	complexin, isoform AB
3R	NT_033777.3	4284352	4302587	+	64877	cpx	Dmel_CG32490	NP_525019.2	138	complexin, isoform E
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163499.1	146	complexin, isoform S
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_730801.1	142	complexin, isoform G
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001097677.1	139	complexin, isoform P
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001097676.1	139	complexin, isoform O
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163503.1	142	complexin, isoform X
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_730802.1	142	complexin, isoform I
3R	NT_033777.3	4284352	4297561	+	64877	cpx	Dmel_CG32490	NP_001163502.1	139	complexin, isoform W
3R	NT_033777.3	4292060	4297561	+	64877	cpx	Dmel_CG32490	NP_001097678.3	125	complexin, isoform AA
3R	NT_033777.3	4292060	4297561	+	64877	cpx	Dmel_CG32490	NP_001097673.1	128	complexin, isoform L
3R	NT_033777.3	4292484	4294647	-	40540	CG9780	Dmel_CG9780	NP_649449.1	592	CG9780
3R	NT_033777.3	4295242	4295819	+	64877	cpx	Dmel_CG32490	NP_001262247.1	98	complexin, isoform Z
3R	NT_033777.3	4295242	4297561	+	64877	cpx	Dmel_CG32490	NP_001014602.1	83	complexin, isoform K
3R	NT_033777.3	4295242	4297561	+	64877	cpx	Dmel_CG32490	NP_001014603.1	83	complexin, isoform J
3R	NT_033777.3	4307987	4309619	+	40541	MP1	Dmel_CG1102	NP_649450.3	390	melanization protease 1, isoform A
3R	NT_033777.3	4307987	4309619	+	40541	MP1	Dmel_CG1102	NP_001138002.1	399	melanization protease 1, isoform C
3R	NT_033777.3	4307987	4309619	+	40541	MP1	Dmel_CG1102	NP_001303421.1	400	melanization protease 1, isoform E
3R	NT_033777.3	4309973	4310831	-	40542	Vps24	Dmel_CG9779	NP_649451.1	223	vacuolar protein sorting 24, isoform A
3R	NT_033777.3	4309973	4310831	-	40542	Vps24	Dmel_CG9779	NP_001303457.1	223	vacuolar protein sorting 24, isoform B
3R	NT_033777.3	4311665	4314244	+	40543	Suv3	Dmel_CG9791	NP_001303458.1	763	Suv3 helicase, isoform D
3R	NT_033777.3	4311665	4314244	+	40543	Suv3	Dmel_CG9791	NP_649452.3	763	Suv3 helicase, isoform C
3R	NT_033777.3	4315937	4318627	-	40544	Syt14	Dmel_CG9778	NP_001262249.1	648	synaptotagmin 14, isoform D
3R	NT_033777.3	4316123	4318627	-	40544	Syt14	Dmel_CG9778	NP_649453.1	586	synaptotagmin 14, isoform A
3R	NT_033777.3	4316123	4318627	-	40544	Syt14	Dmel_CG9778	NP_001262250.1	586	synaptotagmin 14, isoform C
3R	NT_033777.3	4319787	4325835	+	40545	CG9795	Dmel_CG9795	NP_730812.3	736	CG9795, isoform E
3R	NT_033777.3	4319787	4325499	+	40545	CG9795	Dmel_CG9795	NP_788573.2	693	CG9795, isoform F
3R	NT_033777.3	4321852	4325835	+	40545	CG9795	Dmel_CG9795	NP_001014604.1	699	CG9795, isoform D
3R	NT_033777.3	4323488	4325722	+	40545	CG9795	Dmel_CG9795	NP_649454.3	501	CG9795, isoform A
3R	NT_033777.3	4328007	4333912	-	40546	CG9776	Dmel_CG9776	NP_649455.1	1260	CG9776, isoform A
3R	NT_033777.3	4328129	4331004	-	40546	CG9776	Dmel_CG9776	NP_730813.3	685	CG9776, isoform B
3R	NT_033777.3	4335117	4335410	+	50160	CG14645	Dmel_CG14645	NP_652325.2	97	uncharacterized protein Dmel_CG14645
3R	NT_033777.3	4335543	4337606	-	40548	Skp2	Dmel_CG9772	NP_730816.3	559	S-phase kinase-associated protein 2, isoform E
3R	NT_033777.3	4335543	4337606	-	40548	Skp2	Dmel_CG9772	NP_730815.2	559	S-phase kinase-associated protein 2, isoform A
3R	NT_033777.3	4338072	4339504	+	40547	CG1103	Dmel_CG1103	NP_649456.3	230	CG1103, isoform A
3R	NT_033777.3	4338072	4339504	+	40547	CG1103	Dmel_CG1103	NP_001036660.1	230	CG1103, isoform B
3R	NT_033777.3	4345545	4346503	-	40549	hkb	Dmel_CG9768	NP_524221.1	297	huckebein
3R	NT_033777.3	4363308	4363987	+	40551	CG1090	Dmel_CG1090	NP_001262251.1	208	CG1090, isoform E
3R	NT_033777.3	4363308	4365959	+	40551	CG1090	Dmel_CG1090	NP_001262252.1	633	CG1090, isoform I
3R	NT_033777.3	4363308	4365959	+	40551	CG1090	Dmel_CG1090	NP_730819.2	633	CG1090, isoform H
3R	NT_033777.3	4363308	4365959	+	40551	CG1090	Dmel_CG1090	NP_649459.4	633	CG1090, isoform G
3R	NT_033777.3	4379456	4380947	+	40552	CG11739	Dmel_CG11739	NP_730823.2	321	uncharacterized protein Dmel_CG11739, isoform C
3R	NT_033777.3	4379456	4380947	+	40552	CG11739	Dmel_CG11739	NP_730822.2	321	uncharacterized protein Dmel_CG11739, isoform B
3R	NT_033777.3	4379456	4380947	+	40552	CG11739	Dmel_CG11739	NP_649460.3	321	uncharacterized protein Dmel_CG11739, isoform A
3R	NT_033777.3	4379456	4380947	+	40552	CG11739	Dmel_CG11739	NP_730821.2	321	uncharacterized protein Dmel_CG11739, isoform D
3R	NT_033777.3	4381968	4386762	+	40553	Cont	Dmel_CG1084	NP_649461.2	1390	contactin
3R	NT_033777.3	4387930	4389384	+	40554	tub	Dmel_CG10520	NP_001189164.1	462	tube
3R	NT_033777.3	4390426	4391707	+	40555	CG14646	Dmel_CG14646	NP_649462.1	409	uncharacterized protein Dmel_CG14646, isoform A
3R	NT_033777.3	4390426	4391707	+	40555	CG14646	Dmel_CG14646	NP_001189165.1	409	uncharacterized protein Dmel_CG14646, isoform B
3R	NT_033777.3	4392108	4394046	-	4379842	CG34112	Dmel_CG34112	NP_001246902.1	119	uncharacterized protein Dmel_CG34112, isoform B
3R	NT_033777.3	4393745	4394046	-	4379842	CG34112	Dmel_CG34112	NP_001036664.1	80	uncharacterized protein Dmel_CG34112, isoform A
3R	NT_033777.3	4393756	4394046	-	4379842	CG34112	Dmel_CG34112	NP_001246904.1	96	uncharacterized protein Dmel_CG34112, isoform D
3R	NT_033777.3	4393756	4394046	-	4379842	CG34112	Dmel_CG34112	NP_001246903.1	96	uncharacterized protein Dmel_CG34112, isoform C
3R	NT_033777.3	4396376	4397636	-	40556	CG9855	Dmel_CG9855	NP_001262253.1	382	CG9855, isoform C
3R	NT_033777.3	4396376	4397636	-	40556	CG9855	Dmel_CG9855	NP_649463.2	382	CG9855, isoform A
3R	NT_033777.3	4398753	4399893	-	40557	CG9853	Dmel_CG9853	NP_001097680.1	339	CG9853, isoform B
3R	NT_033777.3	4398753	4399893	-	40557	CG9853	Dmel_CG9853	NP_649464.1	339	CG9853, isoform A
3R	NT_033777.3	4398753	4399893	-	40557	CG9853	Dmel_CG9853	NP_001287156.1	339	CG9853, isoform C
3R	NT_033777.3	4400578	4401915	+	40558	CG14647	Dmel_CG14647	NP_649465.6	335	uncharacterized protein Dmel_CG14647
3R	NT_033777.3	4403202	4406255	+	40559	lost	Dmel_CG14648	NP_649466.1	545	lost
3R	NT_033777.3	4407437	4415737	-	40560	CG32944	Dmel_CG32944	NP_001287157.1	449	uncharacterized protein Dmel_CG32944, isoform G
3R	NT_033777.3	4407437	4415386	-	40560	CG32944	Dmel_CG32944	NP_788574.3	576	uncharacterized protein Dmel_CG32944, isoform F
3R	NT_033777.3	4407437	4415737	-	40560	CG32944	Dmel_CG32944	NP_001036666.2	449	uncharacterized protein Dmel_CG32944, isoform E
3R	NT_033777.3	4416542	4417576	+	318785	CG31528	Dmel_CG31528	NP_730833.1	344	uncharacterized protein Dmel_CG31528
3R	NT_033777.3	4423465	4426979	-	40562	srl	Dmel_CG9809	NP_649469.2	1067	spargel, isoform E
3R	NT_033777.3	4423465	4426979	-	40562	srl	Dmel_CG9809	NP_730835.2	1067	spargel, isoform B
3R	NT_033777.3	4423465	4426979	-	40562	srl	Dmel_CG9809	NP_730836.3	1058	spargel, isoform D
3R	NT_033777.3	4427169	4428119	+	318782	CG31525	Dmel_CG31525	NP_730837.1	316	uncharacterized protein Dmel_CG31525
3R	NT_033777.3	4430119	4433747	-	40563	eIF3-S10	Dmel_CG9805	NP_649470.2	1140	eIF3-S10, isoform A
3R	NT_033777.3	4430119	4433747	-	40563	eIF3-S10	Dmel_CG9805	NP_730838.3	1140	eIF3-S10, isoform D
3R	NT_033777.3	4434061	4436051	+	40564	CG1074	Dmel_CG1074	NP_649471.3	488	CG1074
3R	NT_033777.3	4436403	4437107	-	40565	CG9804	Dmel_CG9804	NP_649472.1	234	CG9804, isoform A
3R	NT_033777.3	4436403	4437107	-	40565	CG9804	Dmel_CG9804	NP_001303459.1	234	CG9804, isoform B
3R	NT_033777.3	4437628	4440852	+	40566	CG14650	Dmel_CG14650	NP_649473.1	970	uncharacterized protein Dmel_CG14650
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_730843.2	364	uncharacterized protein Dmel_CG31522, isoform A
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_001246905.2	364	uncharacterized protein Dmel_CG31522, isoform H
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_730842.2	365	uncharacterized protein Dmel_CG31522, isoform D
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_730841.2	365	uncharacterized protein Dmel_CG31522, isoform B
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_001246906.1	365	uncharacterized protein Dmel_CG31522, isoform F
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_001246907.1	364	uncharacterized protein Dmel_CG31522, isoform G
3R	NT_033777.3	4442747	4447758	-	40567	CG31522	Dmel_CG31522	NP_001262254.1	392	uncharacterized protein Dmel_CG31522, isoform I
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_649474.1	354	uncharacterized protein Dmel_CG31523, isoform A
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_001287158.1	354	uncharacterized protein Dmel_CG31523, isoform G
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_001262255.1	354	uncharacterized protein Dmel_CG31523, isoform E
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_001262256.1	354	uncharacterized protein Dmel_CG31523, isoform F
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_730848.2	354	uncharacterized protein Dmel_CG31523, isoform C
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_730847.1	354	uncharacterized protein Dmel_CG31523, isoform D
3R	NT_033777.3	4466691	4468524	-	326148	CG31523	Dmel_CG31523	NP_730846.1	354	uncharacterized protein Dmel_CG31523, isoform B
3R	NT_033777.3	4480819	4484058	+	40568	CG14651	Dmel_CG14651	NP_649475.3	1079	uncharacterized protein Dmel_CG14651
3R	NT_033777.3	4485106	4487463	+	40569	Fip1	Dmel_CG1078	NP_649476.1	701	factor interacting with poly(A) polymerase 1
3R	NT_033777.3	4493404	4538429	-	5740349	CG34357	Dmel_CG34357	NP_001097681.2	1685	uncharacterized protein Dmel_CG34357, isoform D
3R	NT_033777.3	4493404	4538429	-	5740349	CG34357	Dmel_CG34357	NP_001189166.1	1685	uncharacterized protein Dmel_CG34357, isoform C
3R	NT_033777.3	4504665	4506263	-	5740837	CG34425	Dmel_CG34425	NP_001097683.1	532	uncharacterized protein Dmel_CG34425
3R	NT_033777.3	4514953	4538429	-	5740349	CG34357	Dmel_CG34357	NP_001097682.1	422	uncharacterized protein Dmel_CG34357, isoform B
3R	NT_033777.3	4541404	4543215	+	40574	Mur82C	Dmel_CG12586	NP_649481.2	578	mucin related 82C
3R	NT_033777.3	4578093	4578593	-	318261	CG32945	Dmel_CG32945	NP_788575.1	166	uncharacterized protein Dmel_CG32945
3R	NT_033777.3	4622580	4632927	+	40575	5-HT2A	Dmel_CG1056	NP_001097684.2	917	5-hydroxytryptamine (serotonin) receptor 2A, isoform H
3R	NT_033777.3	4622580	4632927	+	40575	5-HT2A	Dmel_CG1056	NP_730859.1	930	5-hydroxytryptamine (serotonin) receptor 2A, isoform B
3R	NT_033777.3	4622580	4628353	+	40575	5-HT2A	Dmel_CG1056	NP_001163505.1	638	5-hydroxytryptamine (serotonin) receptor 2A, isoform D
3R	NT_033777.3	4622580	4632927	+	40575	5-HT2A	Dmel_CG1056	NP_001163506.2	916	5-hydroxytryptamine (serotonin) receptor 2A, isoform F
3R	NT_033777.3	4622580	4632108	+	40575	5-HT2A	Dmel_CG1056	NP_524223.2	868	5-hydroxytryptamine (serotonin) receptor 2A, isoform A
3R	NT_033777.3	4638309	4640222	-	40576	CG9775	Dmel_CG9775	NP_730860.1	421	CG9775, isoform C
3R	NT_033777.3	4638309	4640222	-	40576	CG9775	Dmel_CG9775	NP_649482.2	421	CG9775, isoform A
3R	NT_033777.3	4638309	4640222	-	40576	CG9775	Dmel_CG9775	NP_001262257.1	421	CG9775, isoform E
3R	NT_033777.3	4638431	4639556	-	40576	CG9775	Dmel_CG9775	NP_001163507.1	315	CG9775, isoform D
3R	NT_033777.3	4641996	4644424	+	40578	slx1	Dmel_CG18271	NP_649484.3	297	nuclease slx1
3R	NT_033777.3	4641996	4643247	+	40577	MED31	Dmel_CG1057	NP_001287159.1	199	mediator complex subunit 31, isoform E
3R	NT_033777.3	4642401	4643247	+	40577	MED31	Dmel_CG1057	NP_001262258.1	202	mediator complex subunit 31, isoform D
3R	NT_033777.3	4642401	4643247	+	40577	MED31	Dmel_CG1057	NP_649483.1	204	mediator complex subunit 31, isoform A
3R	NT_033777.3	4642401	4643247	+	40577	MED31	Dmel_CG1057	NP_001246908.1	204	mediator complex subunit 31, isoform C
3R	NT_033777.3	4642401	4643247	+	40577	MED31	Dmel_CG1057	NP_730861.1	204	mediator complex subunit 31, isoform B
3R	NT_033777.3	4644784	4645568	-	40579	Dlip2	Dmel_CG9771	NP_524224.2	226	dorsal interacting protein 2
3R	NT_033777.3	4646064	4648138	+	40580	rpk	Dmel_CG1058	NP_001246909.1	568	ripped pocket, isoform B
3R	NT_033777.3	4646064	4648138	+	40580	rpk	Dmel_CG1058	NP_524225.1	562	ripped pocket, isoform A
3R	NT_033777.3	4649687	4654089	+	40581	Karybeta3	Dmel_CG1059	NP_524226.1	1105	karyopherin beta 3, isoform A
3R	NT_033777.3	4649687	4654089	+	40581	Karybeta3	Dmel_CG1059	NP_001262259.1	1105	karyopherin beta 3, isoform B
3R	NT_033777.3	4655533	4657812	+	40582	spartin	Dmel_CG12001	NP_001246910.1	553	spartin, isoform B
3R	NT_033777.3	4655533	4657812	+	40582	spartin	Dmel_CG12001	NP_649485.1	553	spartin, isoform A
3R	NT_033777.3	4689951	4690608	-	3771851	CG33927	Dmel_CG33927	NP_001027147.1	182	uncharacterized protein Dmel_CG33927
3R	NT_033777.3	4697432	4710683	+	40583	CG43427	Dmel_CG43427	NP_001246913.1	1501	uncharacterized protein Dmel_CG43427, isoform P
3R	NT_033777.3	4697432	4711085	+	40583	CG43427	Dmel_CG43427	NP_001246912.1	1541	uncharacterized protein Dmel_CG43427, isoform O
3R	NT_033777.3	4697432	4704658	+	40583	CG43427	Dmel_CG43427	NP_730865.1	1372	uncharacterized protein Dmel_CG43427, isoform F
3R	NT_033777.3	4697432	4711085	+	40583	CG43427	Dmel_CG43427	NP_001138005.2	1533	uncharacterized protein Dmel_CG43427, isoform M
3R	NT_033777.3	4697432	4704658	+	40583	CG43427	Dmel_CG43427	NP_730864.1	1372	uncharacterized protein Dmel_CG43427, isoform E
3R	NT_033777.3	4697432	4707042	+	40583	CG43427	Dmel_CG43427	NP_001246911.1	648	uncharacterized protein Dmel_CG43427, isoform N
3R	NT_033777.3	4697432	4704658	+	40583	CG43427	Dmel_CG43427	NP_788576.1	1372	uncharacterized protein Dmel_CG43427, isoform G
3R	NT_033777.3	4697432	4710683	+	40583	CG43427	Dmel_CG43427	NP_001138004.2	1493	uncharacterized protein Dmel_CG43427, isoform H
3R	NT_033777.3	4707086	4711085	+	40583	CG43427	Dmel_CG43427	NP_649488.2	889	uncharacterized protein Dmel_CG43427, isoform I
3R	NT_033777.3	4707086	4710683	+	40583	CG43427	Dmel_CG43427	NP_788577.1	849	uncharacterized protein Dmel_CG43427, isoform J
3R	NT_033777.3	4713243	4714085	-	40587	CG9769	Dmel_CG9769	NP_649489.1	280	CG9769
3R	NT_033777.3	4719953	4731562	-	40588	Nep2	Dmel_CG9761	NP_524227.1	763	neprilysin 2, isoform A
3R	NT_033777.3	4719953	4731562	-	40588	Nep2	Dmel_CG9761	NP_001262260.1	763	neprilysin 2, isoform C
3R	NT_033777.3	4719953	4731562	-	40588	Nep2	Dmel_CG9761	NP_001246914.1	774	neprilysin 2, isoform B
3R	NT_033777.3	4734846	4746174	-	40589	tacc	Dmel_CG9765	NP_001262261.1	1320	transforming acidic coiled-coil protein, isoform M
3R	NT_033777.3	4735151	4737366	-	40589	tacc	Dmel_CG9765	NP_001189167.1	245	transforming acidic coiled-coil protein, isoform H
3R	NT_033777.3	4735151	4746174	-	40589	tacc	Dmel_CG9765	NP_001189169.1	1322	transforming acidic coiled-coil protein, isoform K
3R	NT_033777.3	4735151	4748883	-	40589	tacc	Dmel_CG9765	NP_001189168.1	1213	transforming acidic coiled-coil protein, isoform J
3R	NT_033777.3	4735151	4748442	-	40589	tacc	Dmel_CG9765	NP_001262262.1	1225	transforming acidic coiled-coil protein, isoform N
3R	NT_033777.3	4735151	4746174	-	40589	tacc	Dmel_CG9765	NP_788578.1	1293	transforming acidic coiled-coil protein, isoform D
3R	NT_033777.3	4735151	4748883	-	40589	tacc	Dmel_CG9765	NP_477434.1	1226	transforming acidic coiled-coil protein, isoform A
3R	NT_033777.3	4735151	4746174	-	40589	tacc	Dmel_CG9765	NP_477433.2	1308	transforming acidic coiled-coil protein, isoform C
3R	NT_033777.3	4735151	4737366	-	40589	tacc	Dmel_CG9765	NP_788579.1	245	transforming acidic coiled-coil protein, isoform E
3R	NT_033777.3	4735151	4748442	-	40589	tacc	Dmel_CG9765	NP_001246915.1	1225	transforming acidic coiled-coil protein, isoform L
3R	NT_033777.3	4735151	4748883	-	40589	tacc	Dmel_CG9765	NP_730867.2	1227	transforming acidic coiled-coil protein, isoform I
3R	NT_033777.3	4735151	4737366	-	40589	tacc	Dmel_CG9765	NP_788581.1	245	transforming acidic coiled-coil protein, isoform G
3R	NT_033777.3	4735151	4737366	-	40589	tacc	Dmel_CG9765	NP_788580.1	245	transforming acidic coiled-coil protein, isoform F
3R	NT_033777.3	4751609	4768245	-	40590	CG44098	Dmel_CG44098	NP_001262264.1	813	uncharacterized protein Dmel_CG44098, isoform C
3R	NT_033777.3	4751609	4768245	-	40590	CG44098	Dmel_CG44098	NP_001287160.1	813	uncharacterized protein Dmel_CG44098, isoform E
3R	NT_033777.3	4751609	4758075	-	40590	CG44098	Dmel_CG44098	NP_730869.1	612	uncharacterized protein Dmel_CG44098, isoform B
3R	NT_033777.3	4751609	4770674	-	40590	CG44098	Dmel_CG44098	NP_001262265.1	775	uncharacterized protein Dmel_CG44098, isoform D
3R	NT_033777.3	4774672	4775046	-	14462434	CG44088	Dmel_CG44088	NP_001262266.1	124	uncharacterized protein Dmel_CG44088
3R	NT_033777.3	4775706	4777439	+	40593	atms	Dmel_CG2503	NP_001262263.1	538	antimeros, isoform B
3R	NT_033777.3	4775706	4777439	+	40593	atms	Dmel_CG2503	NP_649493.1	538	antimeros, isoform A
3R	NT_033777.3	4777828	4780074	-	40594	CG14655	Dmel_CG14655	NP_649494.1	525	uncharacterized protein Dmel_CG14655
3R	NT_033777.3	4781271	4784684	-	40595	CG17387	Dmel_CG17387	NP_649495.1	967	uncharacterized protein Dmel_CG17387
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189174.1	3139	circadian trip, isoform F
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001287161.1	3111	circadian trip, isoform K
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189176.1	2737	circadian trip, isoform H
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189173.1	2930	circadian trip, isoform E
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_649496.3	3140	circadian trip, isoform A
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189172.2	2736	circadian trip, isoform I
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189175.2	2929	circadian trip, isoform J
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001287163.1	2708	circadian trip, isoform M
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001287162.1	2901	circadian trip, isoform L
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189170.1	3140	circadian trip, isoform B
3R	NT_033777.3	4787827	4801723	-	40596	ctrip	Dmel_CG42574	NP_001189171.1	2737	circadian trip, isoform C
3R	NT_033777.3	4808423	4809259	-	40598	Hus1-like	Dmel_CG2525	NP_001262267.1	278	Hus1-like, isoform B
3R	NT_033777.3	4808423	4809259	-	40598	Hus1-like	Dmel_CG2525	NP_477426.1	278	Hus1-like, isoform A
3R	NT_033777.3	4813803	4815687	+	40599	CG1129	Dmel_CG1129	NP_001189177.2	369	CG1129, isoform D
3R	NT_033777.3	4813803	4815687	+	40599	CG1129	Dmel_CG1129	NP_649498.1	369	CG1129, isoform A
3R	NT_033777.3	4813803	4815687	+	40599	CG1129	Dmel_CG1129	NP_001287164.1	369	CG1129, isoform E
3R	NT_033777.3	4813803	4815687	+	40599	CG1129	Dmel_CG1129	NP_730877.1	369	CG1129, isoform B
3R	NT_033777.3	4816334	4817710	+	40600	CG1126	Dmel_CG1126	NP_649499.1	381	CG1126
3R	NT_033777.3	4819107	4820919	-	40602	CG14657	Dmel_CG14657	NP_001262268.1	444	uncharacterized protein Dmel_CG14657, isoform C
3R	NT_033777.3	4819107	4820919	-	40602	CG14657	Dmel_CG14657	NP_649501.1	444	uncharacterized protein Dmel_CG14657, isoform B
3R	NT_033777.3	4820263	4820919	-	40602	CG14657	Dmel_CG14657	NP_001262269.1	196	uncharacterized protein Dmel_CG14657, isoform D
3R	NT_033777.3	4830064	4830465	-	40603	CG14658	Dmel_CG14658	NP_649502.1	133	uncharacterized protein Dmel_CG14658
3R	NT_033777.3	4830970	4831263	-	40604	CG14659	Dmel_CG14659	NP_649503.1	97	uncharacterized protein Dmel_CG14659
3R	NT_033777.3	4853106	4869163	+	40605	opa	Dmel_CG1133	NP_524228.2	609	odd paired
3R	NT_033777.3	4876090	4878479	-	40606	laf	Dmel_CG14660	NP_001287165.1	755	labial associated factor, isoform B
3R	NT_033777.3	4876090	4878479	-	40606	laf	Dmel_CG14660	NP_649504.1	753	labial associated factor, isoform A
3R	NT_033777.3	4906714	4909926	+	40607	Gnf1	Dmel_CG1119	NP_001014605.1	1008	germ line transcription factor 1, isoform B
3R	NT_033777.3	4906714	4909926	+	40607	Gnf1	Dmel_CG1119	NP_524229.1	986	germ line transcription factor 1, isoform A
3R	NT_033777.3	4917874	4945053	+	40608	Cdep	Dmel_CG44193	NP_730882.2	1163	Chondrocyte-derived ezrin-like domain containing protein, isoform F
3R	NT_033777.3	4917874	4945053	+	40608	Cdep	Dmel_CG44193	NP_001036676.1	1167	Chondrocyte-derived ezrin-like domain containing protein, isoform E
3R	NT_033777.3	4917874	4938075	+	40608	Cdep	Dmel_CG44193	NP_001097685.2	4273	Chondrocyte-derived ezrin-like domain containing protein, isoform G
3R	NT_033777.3	4917874	4923850	+	40608	Cdep	Dmel_CG44193	NP_649505.1	404	Chondrocyte-derived ezrin-like domain containing protein, isoform C
3R	NT_033777.3	4950279	4952496	-	40610	Ubc6	Dmel_CG2013	NP_001246916.1	151	ubiquitin conjugating enzyme 6, isoform C
3R	NT_033777.3	4950279	4952496	-	40610	Ubc6	Dmel_CG2013	NP_524230.2	151	ubiquitin conjugating enzyme 6, isoform A
3R	NT_033777.3	4953608	4954405	-	40611	CG14661	Dmel_CG14661	NP_001246918.1	246	uncharacterized protein Dmel_CG14661, isoform B
3R	NT_033777.3	4953608	4954405	-	40611	CG14661	Dmel_CG14661	NP_649507.1	246	uncharacterized protein Dmel_CG14661, isoform A
3R	NT_033777.3	4957069	4960960	-	40612	CG2016	Dmel_CG2016	NP_001246920.1	249	CG2016, isoform D
3R	NT_033777.3	4957069	4960960	-	40612	CG2016	Dmel_CG2016	NP_001262270.1	254	CG2016, isoform E
3R	NT_033777.3	4957069	4960960	-	40612	CG2016	Dmel_CG2016	NP_649508.1	249	CG2016, isoform B
3R	NT_033777.3	4957069	4959746	-	40612	CG2016	Dmel_CG2016	NP_001246919.1	183	CG2016, isoform C
3R	NT_033777.3	4965584	4968249	+	40613	CG1124	Dmel_CG1124	NP_649509.1	246	CG1124
3R	NT_033777.3	4982177	4984063	-	40614	CG14662	Dmel_CG14662	NP_649510.2	550	uncharacterized protein Dmel_CG14662
3R	NT_033777.3	4986665	4988689	-	40615	plh	Dmel_CG2022	NP_649511.2	193	pasang lhamu
3R	NT_033777.3	5084373	5086025	-	40616	corto	Dmel_CG2530	NP_001246921.1	550	corto, isoform B
3R	NT_033777.3	5084373	5086025	-	40616	corto	Dmel_CG2530	NP_001287166.1	550	corto, isoform E
3R	NT_033777.3	5084373	5086025	-	40616	corto	Dmel_CG2530	NP_524231.2	550	corto, isoform A
3R	NT_033777.3	5084373	5086025	-	40616	corto	Dmel_CG2530	NP_001246923.1	550	corto, isoform D
3R	NT_033777.3	5084373	5086025	-	40616	corto	Dmel_CG2530	NP_001246922.1	550	corto, isoform C
3R	NT_033777.3	5108751	5109166	-	12798230	CG43131	Dmel_CG43131	NP_001246924.1	121	uncharacterized protein Dmel_CG43131
3R	NT_033777.3	5128168	5129715	+	40617	CG12007	Dmel_CG12007	NP_649512.1	515	uncharacterized protein Dmel_CG12007
3R	NT_033777.3	5137187	5137477	-	50157	CG12589	Dmel_CG12589	NP_652322.1	96	uncharacterized protein Dmel_CG12589, isoform A
3R	NT_033777.3	5137187	5137477	-	50157	CG12589	Dmel_CG12589	NP_001287168.1	96	uncharacterized protein Dmel_CG12589, isoform C
3R	NT_033777.3	5137187	5137477	-	50157	CG12589	Dmel_CG12589	NP_001287167.1	96	uncharacterized protein Dmel_CG12589, isoform B
3R	NT_033777.3	5153932	5169566	+	40619	dpr16	Dmel_CG12591	NP_001287169.1	488	defective proboscis extension response 16, isoform C
3R	NT_033777.3	5159751	5160752	+	40618	CG12590	Dmel_CG12590	NP_649513.1	333	uncharacterized protein Dmel_CG12590
3R	NT_033777.3	5165307	5169566	+	40619	dpr16	Dmel_CG12591	NP_001036677.1	443	defective proboscis extension response 16, isoform B
3R	NT_033777.3	5173803	5203328	-	40620	cno	Dmel_CG42312	NP_001303494.1	2051	canoe, isoform J
3R	NT_033777.3	5173803	5203328	-	40620	cno	Dmel_CG42312	NP_001262273.1	1968	canoe, isoform H
3R	NT_033777.3	5173803	5203328	-	40620	cno	Dmel_CG42312	NP_001262272.1	1951	canoe, isoform G
3R	NT_033777.3	5173803	5197958	-	40620	cno	Dmel_CG42312	NP_001262271.1	1721	canoe, isoform F
3R	NT_033777.3	5173803	5203328	-	40620	cno	Dmel_CG42312	NP_524232.2	2051	canoe, isoform E
3R	NT_033777.3	5173803	5203328	-	40620	cno	Dmel_CG42312	NP_730891.1	1882	canoe, isoform C
3R	NT_033777.3	5178724	5203328	-	40620	cno	Dmel_CG42312	NP_730892.2	1817	canoe, isoform D
3R	NT_033777.3	5178724	5203328	-	40620	cno	Dmel_CG42312	NP_001262274.1	1818	canoe, isoform I
3R	NT_033777.3	5218009	5219436	-	40621	Prosbeta2R2	Dmel_CG12161	NP_649515.3	322	proteasome beta2 subunit-related 2
3R	NT_033777.3	5219707	5221291	+	40622	CG1116	Dmel_CG1116	NP_649516.1	442	CG1116, isoform A
3R	NT_033777.3	5219707	5221291	+	40622	CG1116	Dmel_CG1116	NP_730894.2	443	CG1116, isoform D
3R	NT_033777.3	5220016	5221291	+	40622	CG1116	Dmel_CG1116	NP_730895.1	360	CG1116, isoform B
3R	NT_033777.3	5221839	5223131	-	40623	CG2604	Dmel_CG2604	NP_730896.1	430	CG2604, isoform B
3R	NT_033777.3	5221839	5223131	-	40623	CG2604	Dmel_CG2604	NP_649517.1	430	CG2604, isoform A
3R	NT_033777.3	5221839	5223131	-	40623	CG2604	Dmel_CG2604	NP_730897.1	430	CG2604, isoform C
3R	NT_033777.3	5224155	5224409	+	12798232	CG14664	Dmel_CG14664	NP_001262275.1	84	uncharacterized protein Dmel_CG14664, isoform B
3R	NT_033777.3	5224155	5224409	+	12798232	CG14664	Dmel_CG14664	NP_001287170.1	84	uncharacterized protein Dmel_CG14664, isoform C
3R	NT_033777.3	5224155	5224409	+	12798232	CG14664	Dmel_CG14664	NP_001246925.1	84	uncharacterized protein Dmel_CG14664, isoform A
3R	NT_033777.3	5226270	5226914	+	40624	Vps37B	Dmel_CG1115	NP_001246927.1	214	vacuolar protein sorting 37B, isoform C
3R	NT_033777.3	5226270	5226914	+	40624	Vps37B	Dmel_CG1115	NP_649518.1	214	vacuolar protein sorting 37B, isoform A
3R	NT_033777.3	5226270	5226914	+	40624	Vps37B	Dmel_CG1115	NP_001246926.1	214	vacuolar protein sorting 37B, isoform B
3R	NT_033777.3	5227992	5232068	-	53566	Kat60	Dmel_CG10229	NP_001262276.1	605	katanin 60, isoform B
3R	NT_033777.3	5227992	5232068	-	53566	Kat60	Dmel_CG10229	NP_524997.2	572	katanin 60, isoform A
3R	NT_033777.3	5232642	5236034	+	40626	Mms19	Dmel_CG12005	NP_649519.1	959	Mms19
3R	NT_033777.3	5236399	5237259	-	40627	rtp	Dmel_CG10233	NP_649520.1	198	retinophilin
3R	NT_033777.3	5237891	5251531	-	40628	CG12163	Dmel_CG12163	NP_730901.1	614	uncharacterized protein Dmel_CG12163, isoform A
3R	NT_033777.3	5237891	5251531	-	40628	CG12163	Dmel_CG12163	NP_649521.1	475	uncharacterized protein Dmel_CG12163, isoform B
3R	NT_033777.3	5240304	5240564	-	2768659	CG33293	Dmel_CG33293	NP_996150.1	86	uncharacterized protein Dmel_CG33293
3R	NT_033777.3	5243310	5251531	-	40628	CG12163	Dmel_CG12163	NP_730902.2	350	uncharacterized protein Dmel_CG12163, isoform C
3R	NT_033777.3	5253456	5255403	+	40629	CG1113	Dmel_CG1113	NP_001262277.1	562	CG1113, isoform B
3R	NT_033777.3	5253456	5255403	+	40629	CG1113	Dmel_CG1113	NP_649522.1	562	CG1113, isoform A
3R	NT_033777.3	5255462	5256603	-	40630	CG12173	Dmel_CG12173	NP_649523.1	256	uncharacterized protein Dmel_CG12173
3R	NT_033777.3	5257565	5267840	+	40633	Hph	Dmel_CG44015	NP_001287171.1	478	HIF prolyl hydroxylase, isoform D
3R	NT_033777.3	5257565	5267840	+	40633	Hph	Dmel_CG44015	NP_730906.1	478	HIF prolyl hydroxylase, isoform C
3R	NT_033777.3	5258471	5259145	-	40632	Tim17a2	Dmel_CG14666	NP_649524.1	224	Tim17a2
3R	NT_033777.3	5265540	5267840	+	40633	Hph	Dmel_CG44015	NP_649525.1	325	HIF prolyl hydroxylase, isoform A
3R	NT_033777.3	5266796	5267840	+	40633	Hph	Dmel_CG44015	NP_730908.1	278	HIF prolyl hydroxylase, isoform B
3R	NT_033777.3	5273947	5298733	-	45467	mtd	Dmel_CG32464	NP_001027149.1	1012	mustard, isoform M
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_730910.2	1246	mustard, isoform U
3R	NT_033777.3	5273947	5275078	-	45467	mtd	Dmel_CG32464	NP_001138006.1	192	mustard, isoform Q
3R	NT_033777.3	5273947	5334571	-	45467	mtd	Dmel_CG32464	NP_730918.2	1127	mustard, isoform X
3R	NT_033777.3	5273947	5305745	-	45467	mtd	Dmel_CG32464	NP_996151.1	1033	mustard, isoform G
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_001027148.1	1270	mustard, isoform N
3R	NT_033777.3	5273947	5286955	-	45467	mtd	Dmel_CG32464	NP_730913.1	213	mustard, isoform I
3R	NT_033777.3	5273947	5282880	-	45467	mtd	Dmel_CG32464	NP_730914.1	267	mustard, isoform C
3R	NT_033777.3	5273947	5297343	-	45467	mtd	Dmel_CG32464	NP_001262279.1	871	mustard, isoform AA
3R	NT_033777.3	5273947	5297343	-	45467	mtd	Dmel_CG32464	NP_730912.1	869	mustard, isoform F
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_730909.1	1270	mustard, isoform J
3R	NT_033777.3	5273947	5275078	-	45467	mtd	Dmel_CG32464	NP_730916.1	192	mustard, isoform H
3R	NT_033777.3	5273947	5296426	-	45467	mtd	Dmel_CG32464	NP_001138007.1	789	mustard, isoform R
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_001246930.1	1158	mustard, isoform Y
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_652017.1	1270	mustard, isoform B
3R	NT_033777.3	5273947	5334754	-	45467	mtd	Dmel_CG32464	NP_001138009.1	1106	mustard, isoform T
3R	NT_033777.3	5273947	5305745	-	45467	mtd	Dmel_CG32464	NP_001036679.1	1025	mustard, isoform O
3R	NT_033777.3	5273947	5334754	-	45467	mtd	Dmel_CG32464	NP_001246929.1	1180	mustard, isoform W
3R	NT_033777.3	5273947	5334754	-	45467	mtd	Dmel_CG32464	NP_001138008.1	1106	mustard, isoform S
3R	NT_033777.3	5273947	5279653	-	45467	mtd	Dmel_CG32464	NP_730915.1	210	mustard, isoform A
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_001246928.1	1344	mustard, isoform V
3R	NT_033777.3	5273947	5305745	-	45467	mtd	Dmel_CG32464	NP_730911.1	1055	mustard, isoform K
3R	NT_033777.3	5273947	5314198	-	45467	mtd	Dmel_CG32464	NP_001036678.1	1314	mustard, isoform P
3R	NT_033777.3	5275905	5277596	-	318790	CG31538	Dmel_CG31538	NP_730917.1	563	uncharacterized protein Dmel_CG31538
3R	NT_033777.3	5300192	5300988	+	40635	Tim17b1	Dmel_CG1158	NP_649526.2	179	Tim17b1
3R	NT_033777.3	5353844	5354621	-	40637	CG11999	Dmel_CG11999	NP_649527.1	216	uncharacterized protein Dmel_CG11999
3R	NT_033777.3	5355185	5356580	+	40638	CG1161	Dmel_CG1161	NP_649528.2	227	CG1161, isoform A
3R	NT_033777.3	5355185	5356266	+	40638	CG1161	Dmel_CG1161	NP_001014606.2	221	CG1161, isoform C
3R	NT_033777.3	5357131	5358075	-	40639	Prosbeta7	Dmel_CG12000	NP_730922.1	268	proteasome beta7 subunit, isoform B
3R	NT_033777.3	5357131	5358075	-	40639	Prosbeta7	Dmel_CG12000	NP_649529.1	268	proteasome beta7 subunit, isoform A
3R	NT_033777.3	5359158	5361709	-	40640	Cerk	Dmel_CG16708	NP_649530.2	687	ceramide kinase, isoform B
3R	NT_033777.3	5359158	5361709	-	40640	Cerk	Dmel_CG16708	NP_730923.1	687	ceramide kinase, isoform A
3R	NT_033777.3	5369592	5370250	+	318791	CG31542	Dmel_CG31542	NP_001189179.1	199	uncharacterized protein Dmel_CG31542, isoform C
3R	NT_033777.3	5369592	5370250	+	318791	CG31542	Dmel_CG31542	NP_730924.1	199	uncharacterized protein Dmel_CG31542, isoform A
3R	NT_033777.3	5370420	5371475	+	318791	CG31542	Dmel_CG31542	NP_001287172.1	311	uncharacterized protein Dmel_CG34277, isoform E
3R	NT_033777.3	5370420	5371475	+	318791	CG31542	Dmel_CG31542	NP_001097686.4	311	uncharacterized protein Dmel_CG34277, isoform D
3R	NT_033777.3	5371887	5372344	+	48312	RpII18	Dmel_CG1163	NP_524910.1	131	RNA polymerase II 18kD subunit
3R	NT_033777.3	5372675	5374497	-	40642	hd	Dmel_CG2669	NP_001303424.1	568	humpty dumpty, isoform B
3R	NT_033777.3	5372675	5374497	-	40642	hd	Dmel_CG2669	NP_649531.1	568	humpty dumpty, isoform A
3R	NT_033777.3	5375091	5376283	+	40643	CG14667	Dmel_CG14667	NP_001014607.1	337	uncharacterized protein Dmel_CG14667
3R	NT_033777.3	5376932	5377810	+	40644	7B2	Dmel_CG1168	NP_001014608.1	276	7B2, isoform B
3R	NT_033777.3	5376932	5377810	+	40644	7B2	Dmel_CG1168	NP_620471.3	271	7B2, isoform A
3R	NT_033777.3	5378638	5385811	-	45884	kkv	Dmel_CG2666	NP_996152.1	1615	krotzkopf verkehrt, isoform C
3R	NT_033777.3	5378638	5385811	-	45884	kkv	Dmel_CG2666	NP_524233.1	1615	krotzkopf verkehrt, isoform A
3R	NT_033777.3	5378638	5385811	-	45884	kkv	Dmel_CG2666	NP_730928.2	1615	krotzkopf verkehrt, isoform D
3R	NT_033777.3	5386781	5387593	-	40646	CG14668	Dmel_CG14668	NP_649533.1	270	uncharacterized protein Dmel_CG14668
3R	NT_033777.3	5394309	5396180	+	40647	CG1172	Dmel_CG1172	NP_001246931.1	249	CG1172, isoform B
3R	NT_033777.3	5394309	5396180	+	40647	CG1172	Dmel_CG1172	NP_649534.1	249	CG1172, isoform A
3R	NT_033777.3	5394309	5396180	+	40647	CG1172	Dmel_CG1172	NP_001262280.1	249	CG1172, isoform C
3R	NT_033777.3	5397643	5399196	-	40648	Or83a	Dmel_CG10612	NP_524234.2	453	odorant receptor 83a
3R	NT_033777.3	5400822	5401811	-	40649	CG2663	Dmel_CG2663	NP_730931.1	308	CG2663, isoform A
3R	NT_033777.3	5400822	5401811	-	40649	CG2663	Dmel_CG2663	NP_649535.2	308	CG2663, isoform C
3R	NT_033777.3	5407452	5409923	-	40650	Orco	Dmel_CG10609	NP_001097687.1	486	odorant receptor co-receptor, isoform B
3R	NT_033777.3	5407452	5409923	-	40650	Orco	Dmel_CG10609	NP_524235.2	486	odorant receptor co-receptor, isoform A
3R	NT_033777.3	5425744	5427177	-	40651	CG12147	Dmel_CG12147	NP_649536.1	477	uncharacterized protein Dmel_CG12147
3R	NT_033777.3	5437314	5437547	+	40652	CG14669	Dmel_CG14669	NP_001303485.1	77	uncharacterized protein Dmel_CG14669, isoform D
3R	NT_033777.3	5437314	5442628	+	40652	CG14669	Dmel_CG14669	NP_001287173.1	192	uncharacterized protein Dmel_CG14669, isoform C
3R	NT_033777.3	5437314	5455616	+	40652	CG14669	Dmel_CG14669	NP_001262281.1	306	uncharacterized protein Dmel_CG14669, isoform B
3R	NT_033777.3	5437314	5455616	+	40652	CG14669	Dmel_CG14669	NP_649537.5	306	uncharacterized protein Dmel_CG14669, isoform A
3R	NT_033777.3	5459392	5463080	-	40653	PEK	Dmel_CG2087	NP_001262283.1	1099	pancreatic eIF-2alpha kinase, isoform C
3R	NT_033777.3	5459392	5463792	-	40653	PEK	Dmel_CG2087	NP_001262282.1	1110	pancreatic eIF-2alpha kinase, isoform B
3R	NT_033777.3	5459392	5464432	-	40653	PEK	Dmel_CG2087	NP_649538.1	1162	pancreatic eIF-2alpha kinase, isoform A
3R	NT_033777.3	5465708	5466374	-	40654	RpL35A	Dmel_CG2099	NP_649539.1	157	ribosomal protein L35A
3R	NT_033777.3	5468030	5469439	+	40655	POLDIP2	Dmel_CG12162	NP_730934.1	431	polymerase (DNA-directed), delta interacting protein 2, isoform B
3R	NT_033777.3	5468040	5469439	+	40655	POLDIP2	Dmel_CG12162	NP_649540.1	410	polymerase (DNA-directed), delta interacting protein 2, isoform A
3R	NT_033777.3	5469561	5470578	-	40656	mRpL44	Dmel_CG2109	NP_649541.1	321	mitochondrial ribosomal protein L44
3R	NT_033777.3	5471059	5472665	+	40657	Snr1	Dmel_CG1064	NP_730935.1	370	Snf5-related 1
3R	NT_033777.3	5472876	5474323	-	19835016	CG45100	Dmel_CG45100	NP_651978.2	438	histone deacetylase 3
3R	NT_033777.3	5474373	5474489	-	19835016	CG45100	Dmel_CG45100	NP_001287174.1	38	uncharacterized protein Dmel_CG45100
3R	NT_033777.3	5475260	5484907	+	40659	Hcs	Dmel_CG14670	NP_649542.1	1041	holocarboxylase synthetase, isoform A
3R	NT_033777.3	5475260	5484907	+	40659	Hcs	Dmel_CG14670	NP_001287176.1	999	holocarboxylase synthetase, isoform D
3R	NT_033777.3	5475260	5484907	+	40659	Hcs	Dmel_CG14670	NP_001287175.1	1047	holocarboxylase synthetase, isoform C
3R	NT_033777.3	5475260	5484907	+	40659	Hcs	Dmel_CG14670	NP_001262284.1	993	holocarboxylase synthetase, isoform B
3R	NT_033777.3	5480737	5483637	-	40660	ksr	Dmel_CG2899	NP_001287179.1	966	kinase suppressor of ras, isoform D
3R	NT_033777.3	5480737	5483637	-	40660	ksr	Dmel_CG2899	NP_001287178.1	966	kinase suppressor of ras, isoform C
3R	NT_033777.3	5480737	5483637	-	40660	ksr	Dmel_CG2899	NP_001287177.1	966	kinase suppressor of ras, isoform B
3R	NT_033777.3	5480737	5483637	-	40660	ksr	Dmel_CG2899	NP_524236.2	966	kinase suppressor of ras, isoform A
3R	NT_033777.3	5485639	5487181	+	40661	CG31550	Dmel_CG31550	NP_001303495.1	440	uncharacterized protein Dmel_CG31550, isoform E
3R	NT_033777.3	5485639	5489393	+	40661	CG31550	Dmel_CG31550	NP_001262285.1	835	uncharacterized protein Dmel_CG31550, isoform D
3R	NT_033777.3	5485639	5489393	+	40661	CG31550	Dmel_CG31550	NP_730937.1	832	uncharacterized protein Dmel_CG31550, isoform B
3R	NT_033777.3	5485639	5487944	+	40661	CG31550	Dmel_CG31550	NP_001097688.1	433	uncharacterized protein Dmel_CG31550, isoform C
3R	NT_033777.3	5489783	5498983	-	40663	CG31547	Dmel_CG31547	NP_730939.1	995	uncharacterized protein Dmel_CG31547, isoform A
3R	NT_033777.3	5489783	5502296	-	40663	CG31547	Dmel_CG31547	NP_730938.1	1068	uncharacterized protein Dmel_CG31547, isoform B
3R	NT_033777.3	5509778	5516388	-	40665	Nmdar1	Dmel_CG2902	NP_730940.1	997	NMDA receptor 1
3R	NT_033777.3	5522458	5522658	-	14462437	CG43845	Dmel_CG43845	NP_001334688.1	66	uncharacterized protein Dmel_CG43845, isoform D
3R	NT_033777.3	5522458	5522658	-	14462437	CG43845	Dmel_CG43845	NP_001334687.1	66	uncharacterized protein Dmel_CG43845, isoform C
3R	NT_033777.3	5527819	5538651	+	40664	Itp-r83A	Dmel_CG1063	NP_730942.1	2828	inositol 1,4,5,-tris-phosphate receptor, isoform A
3R	NT_033777.3	5527819	5538651	+	40664	Itp-r83A	Dmel_CG1063	NP_730941.1	2837	inositol 1,4,5,-tris-phosphate receptor, isoform B
3R	NT_033777.3	5527819	5538651	+	40664	Itp-r83A	Dmel_CG1063	NP_001287180.1	2828	inositol 1,4,5,-tris-phosphate receptor, isoform C
3R	NT_033777.3	5541032	5546675	-	40666	CG2519	Dmel_CG2519	NP_649546.1	1304	CG2519, isoform A
3R	NT_033777.3	5541032	5546675	-	40666	CG2519	Dmel_CG2519	NP_996153.1	1280	CG2519, isoform B
3R	NT_033777.3	5541032	5546675	-	40666	CG2519	Dmel_CG2519	NP_001262286.1	1280	CG2519, isoform C
3R	NT_033777.3	5548387	5550620	-	40667	mia	Dmel_CG10390	NP_649547.3	589	meiosis I arrest, isoform A
3R	NT_033777.3	5548387	5550620	-	40667	mia	Dmel_CG10390	NP_001138010.1	589	meiosis I arrest, isoform B
3R	NT_033777.3	5548387	5550620	-	40667	mia	Dmel_CG10390	NP_001287181.1	589	meiosis I arrest, isoform C
3R	NT_033777.3	5552962	5554183	-	40668	Pcmt	Dmel_CG2152	NP_536756.1	226	Protein-L-isoaspartate (D-aspartate) O-methyltransferase, isoform A
3R	NT_033777.3	5553256	5554183	-	40668	Pcmt	Dmel_CG2152	NP_001262287.1	203	Protein-L-isoaspartate (D-aspartate) O-methyltransferase, isoform C
3R	NT_033777.3	5555135	5557540	+	40669	Snm1	Dmel_CG10018	NP_649548.1	763	Snm1
3R	NT_033777.3	5558298	5563129	-	40670	Pi4KIIalpha	Dmel_CG2929	NP_730944.2	710	Pi4KIIalpha, isoform A
3R	NT_033777.3	5558298	5561128	-	40670	Pi4KIIalpha	Dmel_CG2929	NP_730945.1	563	Pi4KIIalpha, isoform B
3R	NT_033777.3	5558298	5563129	-	40670	Pi4KIIalpha	Dmel_CG2929	NP_996154.1	710	Pi4KIIalpha, isoform C
3R	NT_033777.3	5564193	5564725	-	40671	CG14671	Dmel_CG14671	NP_001262288.1	155	uncharacterized protein Dmel_CG14671, isoform B
3R	NT_033777.3	5564193	5564725	-	40671	CG14671	Dmel_CG14671	NP_649550.1	155	uncharacterized protein Dmel_CG14671, isoform A
3R	NT_033777.3	5566142	5567360	+	40672	CG12746	Dmel_CG12746	NP_730949.2	363	uncharacterized protein Dmel_CG12746, isoform B
3R	NT_033777.3	5566142	5567360	+	40672	CG12746	Dmel_CG12746	NP_649551.4	363	uncharacterized protein Dmel_CG12746, isoform E
3R	NT_033777.3	5566142	5567360	+	40672	CG12746	Dmel_CG12746	NP_788583.1	363	uncharacterized protein Dmel_CG12746, isoform D
3R	NT_033777.3	5567613	5568521	-	40673	CG2931	Dmel_CG2931	NP_649552.1	302	CG2931
3R	NT_033777.3	5569223	5570117	+	117332	Rheb	Dmel_CG1081	NP_730951.2	182	Ras homolog enriched in brain, isoform B
3R	NT_033777.3	5569223	5570117	+	117332	Rheb	Dmel_CG1081	NP_730950.2	182	Ras homolog enriched in brain, isoform A
3R	NT_033777.3	5574262	5578517	+	40675	CRMP	Dmel_CG1411	NP_477307.1	589	collapsin response mediator protein, isoform A
3R	NT_033777.3	5574262	5578517	+	40675	CRMP	Dmel_CG1411	NP_730954.2	594	collapsin response mediator protein, isoform E
3R	NT_033777.3	5574262	5577039	+	40675	CRMP	Dmel_CG1411	NP_730952.1	332	collapsin response mediator protein, isoform B
3R	NT_033777.3	5580144	5587817	-	40676	CG2926	Dmel_CG2926	NP_649554.1	2296	CG2926, isoform A
3R	NT_033777.3	5584788	5587817	-	40676	CG2926	Dmel_CG2926	NP_001262289.1	874	CG2926, isoform B
3R	NT_033777.3	5588943	5589539	+	40677	rev7	Dmel_CG2948	NP_649555.1	198	rev7
3R	NT_033777.3	5589821	5591332	-	40678	noi	Dmel_CG2925	NP_477114.1	503	noisette
3R	NT_033777.3	5592006	5593354	+	40679	Vha26	Dmel_CG1088	NP_001287182.1	226	vacuolar 
3R	NT_033777.3	5592006	5593354	+	40679	Vha26	Dmel_CG1088	NP_730957.1	226	vacuolar 
3R	NT_033777.3	5592006	5593354	+	40679	Vha26	Dmel_CG1088	NP_524237.1	226	vacuolar 
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730959.1	422	krasavietz, isoform B
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730961.1	422	krasavietz, isoform D
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_524238.1	422	krasavietz, isoform G
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730960.1	422	krasavietz, isoform C
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730958.1	422	krasavietz, isoform A
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730962.1	422	krasavietz, isoform E
3R	NT_033777.3	5596085	5599353	-	40680	kra	Dmel_CG2922	NP_730963.1	422	krasavietz, isoform F
3R	NT_033777.3	5601556	5601976	+	40681	CG1427	Dmel_CG1427	NP_001262290.1	86	CG1427, isoform E
3R	NT_033777.3	5601556	5603165	+	40681	CG1427	Dmel_CG1427	NP_649556.3	478	CG1427, isoform C
3R	NT_033777.3	5601556	5603165	+	40681	CG1427	Dmel_CG1427	NP_996155.2	476	CG1427, isoform D
3R	NT_033777.3	5603341	5606446	-	40682	asl	Dmel_CG2919	NP_649557.2	994	asterless
3R	NT_033777.3	5607373	5610620	-	40683	Rga	Dmel_CG2161	NP_524239.2	579	regena, isoform B
3R	NT_033777.3	5607373	5610620	-	40683	Rga	Dmel_CG2161	NP_001287183.1	579	regena, isoform C
3R	NT_033777.3	5607373	5610620	-	40683	Rga	Dmel_CG2161	NP_730966.1	585	regena, isoform A
3R	NT_033777.3	5613462	5615870	+	40684	Atu	Dmel_CG1433	NP_524240.1	725	another transcription unit
3R	NT_033777.3	5617641	5618727	-	40685	Spec2	Dmel_CG14672	NP_730968.1	85	Spec2
3R	NT_033777.3	5622137	5622688	-	40686	CG2911	Dmel_CG2911	NP_001097689.1	183	CG2911, isoform B
3R	NT_033777.3	5622137	5622688	-	40686	CG2911	Dmel_CG2911	NP_649559.1	183	CG2911, isoform A
3R	NT_033777.3	5624500	5625376	+	40687	RpL13A	Dmel_CG1475	NP_001262291.1	101	ribosomal protein L13A, isoform C
3R	NT_033777.3	5624500	5625869	+	40687	RpL13A	Dmel_CG1475	NP_649560.1	205	ribosomal protein L13A, isoform B
3R	NT_033777.3	5627852	5632033	+	318795	CG31551	Dmel_CG31551	NP_730971.1	1393	uncharacterized protein Dmel_CG31551
3R	NT_033777.3	5632396	5633169	+	40689	CG31549	Dmel_CG31549	NP_730972.2	257	uncharacterized protein Dmel_CG31549, isoform A
3R	NT_033777.3	5632396	5633169	+	40689	CG31549	Dmel_CG31549	NP_001262292.1	257	uncharacterized protein Dmel_CG31549, isoform B
3R	NT_033777.3	5633692	5634465	+	40690	CG12171	Dmel_CG12171	NP_649563.1	257	uncharacterized protein Dmel_CG12171
3R	NT_033777.3	5634768	5635562	-	40691	CG31546	Dmel_CG31546	NP_730973.1	264	uncharacterized protein Dmel_CG31546
3R	NT_033777.3	5636035	5636805	-	318794	CG31548	Dmel_CG31548	NP_730974.1	256	uncharacterized protein Dmel_CG31548
3R	NT_033777.3	5637266	5638582	+	40692	CG12170	Dmel_CG12170	NP_649565.1	438	uncharacterized protein Dmel_CG12170
3R	NT_033777.3	5640303	5648524	-	40693	MTA1-like	Dmel_CG2244	NP_001262293.1	922	metastasis associated 1-like, isoform D
3R	NT_033777.3	5640429	5648524	-	40693	MTA1-like	Dmel_CG2244	NP_649566.2	844	metastasis associated 1-like, isoform B
3R	NT_033777.3	5640429	5647270	-	40693	MTA1-like	Dmel_CG2244	NP_001138011.1	853	metastasis associated 1-like, isoform C
3R	NT_033777.3	5640429	5648524	-	40693	MTA1-like	Dmel_CG2244	NP_730976.1	880	metastasis associated 1-like, isoform A
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_730978.1	773	secretory 23, isoform A
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_001287184.1	773	secretory 23, isoform H
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_001246932.1	781	secretory 23, isoform E
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_001246933.1	780	secretory 23, isoform F
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_730979.1	773	secretory 23, isoform B
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_001246934.1	780	secretory 23, isoform D
3R	NT_033777.3	5649382	5652470	+	40694	Sec23	Dmel_CG1250	NP_001262294.1	773	secretory 23, isoform G
3R	NT_033777.3	5653252	5654722	-	40695	elm	Dmel_CG2185	NP_001262295.1	189	ethanol sensitive with low memory, isoform B
3R	NT_033777.3	5653252	5654722	-	40695	elm	Dmel_CG2185	NP_649568.1	189	ethanol sensitive with low memory, isoform A
3R	NT_033777.3	5655206	5656205	+	40696	MED27	Dmel_CG1245	NP_649569.1	293	mediator complex subunit 27
3R	NT_033777.3	5656353	5659630	-	40697	CG2182	Dmel_CG2182	NP_649570.1	671	CG2182
3R	NT_033777.3	5660964	5665038	+	40698	CG1109	Dmel_CG1109	NP_730983.1	807	CG1109, isoform B
3R	NT_033777.3	5660964	5665038	+	40698	CG1109	Dmel_CG1109	NP_730982.1	807	CG1109, isoform A
3R	NT_033777.3	5665522	5668827	-	40699	Xe7	Dmel_CG2179	NP_649572.4	777	Xe7, isoform D
3R	NT_033777.3	5665522	5668827	-	40699	Xe7	Dmel_CG2179	NP_730984.1	783	Xe7, isoform A
3R	NT_033777.3	5667286	5668827	-	40699	Xe7	Dmel_CG2179	NP_001262296.1	340	Xe7, isoform E
3R	NT_033777.3	5673709	5678801	+	40700	Atg17	Dmel_CG1347	NP_649573.2	1357	Autophagy-related 17, isoform C
3R	NT_033777.3	5673709	5678801	+	40700	Atg17	Dmel_CG1347	NP_996156.1	1357	Autophagy-related 17, isoform B
3R	NT_033777.3	5681231	5682741	-	40701	Rab23	Dmel_CG2108	NP_649574.1	268	Rab23
3R	NT_033777.3	5687250	5711956	+	40704	plx	Dmel_CG42612	NP_001163511.1	1572	pollux, isoform C
3R	NT_033777.3	5687250	5711956	+	40704	plx	Dmel_CG42612	NP_001262297.1	1518	pollux, isoform E
3R	NT_033777.3	5691968	5693242	-	40702	CG2104	Dmel_CG2104	NP_649575.1	424	CG2104, isoform A
3R	NT_033777.3	5691968	5693242	-	40702	CG2104	Dmel_CG2104	NP_001262299.1	424	CG2104, isoform B
3R	NT_033777.3	5702847	5711956	+	40704	plx	Dmel_CG42612	NP_001262298.1	1352	pollux, isoform F
3R	NT_033777.3	5702847	5711956	+	40704	plx	Dmel_CG42612	NP_730989.2	1406	pollux, isoform D
3R	NT_033777.3	5707184	5711956	+	40704	plx	Dmel_CG42612	NP_730988.1	1379	pollux, isoform A
3R	NT_033777.3	5713551	5716612	-	44018	cas	Dmel_CG2102	NP_001262300.1	691	castor, isoform C
3R	NT_033777.3	5713551	5716612	-	44018	cas	Dmel_CG2102	NP_524677.1	793	castor, isoform A
3R	NT_033777.3	5733695	5734666	+	40706	CG1239	Dmel_CG1239	NP_649577.1	300	CG1239, isoform A
3R	NT_033777.3	5733695	5734666	+	40706	CG1239	Dmel_CG1239	NP_001287186.1	300	CG1239, isoform C
3R	NT_033777.3	5733695	5734666	+	40706	CG1239	Dmel_CG1239	NP_001287185.1	300	CG1239, isoform B
3R	NT_033777.3	5734762	5736256	-	40707	CG2100	Dmel_CG2100	NP_001163512.1	477	CG2100, isoform B
3R	NT_033777.3	5734762	5736256	-	40707	CG2100	Dmel_CG2100	NP_649578.1	477	CG2100, isoform A
3R	NT_033777.3	5736789	5737908	+	40708	CG1236	Dmel_CG1236	NP_649579.2	347	CG1236
3R	NT_033777.3	5738318	5742128	-	40709	Sym	Dmel_CG2097	NP_649580.1	1165	symplekin
3R	NT_033777.3	5742985	5745750	+	40710	Madm	Dmel_CG1098	NP_649581.1	637	MLF1-adaptor molecule, isoform A
3R	NT_033777.3	5742985	5745750	+	40710	Madm	Dmel_CG1098	NP_001303420.1	637	MLF1-adaptor molecule, isoform B
3R	NT_033777.3	5753431	5754677	-	40711	CG2091	Dmel_CG2091	NP_649582.1	374	CG2091
3R	NT_033777.3	5755158	5758818	-	40712	Sec8	Dmel_CG2095	NP_730996.2	985	secretory 8
3R	NT_033777.3	5758696	5762465	-	40713	CG2082	Dmel_CG2082	NP_001246935.1	335	CG2082, isoform O
3R	NT_033777.3	5760138	5771701	-	40713	CG2082	Dmel_CG2082	NP_730998.1	365	CG2082, isoform A
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163517.1	364	CG2082, isoform K
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163518.1	363	CG2082, isoform L
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163516.1	361	CG2082, isoform J
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_730997.1	361	CG2082, isoform C
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_649584.3	364	CG2082, isoform B
3R	NT_033777.3	5760138	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163514.1	363	CG2082, isoform H
3R	NT_033777.3	5760138	5771701	-	40713	CG2082	Dmel_CG2082	NP_001163513.1	368	CG2082, isoform G
3R	NT_033777.3	5761225	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163520.1	197	CG2082, isoform N
3R	NT_033777.3	5761225	5771701	-	40713	CG2082	Dmel_CG2082	NP_731000.1	201	CG2082, isoform D
3R	NT_033777.3	5761414	5777011	-	40713	CG2082	Dmel_CG2082	NP_001163519.1	211	CG2082, isoform M
3R	NT_033777.3	5779428	5780366	+	40714	jagn	Dmel_CG10978	NP_731002.1	197	jagunal, isoform B
3R	NT_033777.3	5779428	5780366	+	40714	jagn	Dmel_CG10978	NP_649585.1	197	jagunal, isoform A
3R	NT_033777.3	5781900	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_649586.1	605	katanin p60-like 1, isoform A
3R	NT_033777.3	5781900	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163526.1	609	katanin p60-like 1, isoform H
3R	NT_033777.3	5781900	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163524.1	605	katanin p60-like 1, isoform F
3R	NT_033777.3	5781900	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163522.1	609	katanin p60-like 1, isoform D
3R	NT_033777.3	5783217	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163525.1	673	katanin p60-like 1, isoform G
3R	NT_033777.3	5783217	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163523.1	673	katanin p60-like 1, isoform E
3R	NT_033777.3	5783217	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_001163521.1	669	katanin p60-like 1, isoform C
3R	NT_033777.3	5783217	5787120	+	40715	kat-60L1	Dmel_CG1193	NP_731004.1	669	katanin p60-like 1, isoform B
3R	NT_033777.3	5787469	5788832	-	40716	Hat1	Dmel_CG2051	NP_731006.1	405	histone acetyltransferase 1, isoform B
3R	NT_033777.3	5787469	5788832	-	40716	Hat1	Dmel_CG2051	NP_649587.1	405	histone acetyltransferase 1, isoform A
3R	NT_033777.3	5789776	5791405	+	40717	Rpn5	Dmel_CG1100	NP_649588.1	502	regulatory particle non-ATPase 5
3R	NT_033777.3	5791973	5793322	+	40718	CG1218	Dmel_CG1218	NP_649589.1	449	CG1218
3R	NT_033777.3	5793398	5794222	-	40719	CG2046	Dmel_CG2046	NP_649590.1	235	CG2046
3R	NT_033777.3	5794885	5798394	+	40720	CG10979	Dmel_CG10979	NP_649591.1	959	uncharacterized protein Dmel_CG10979, isoform A
3R	NT_033777.3	5794885	5798394	+	40720	CG10979	Dmel_CG10979	NP_001262301.1	959	uncharacterized protein Dmel_CG10979, isoform B
3R	NT_033777.3	5803156	5808269	+	40721	CG11000	Dmel_CG11000	NP_001246936.1	332	uncharacterized protein Dmel_CG11000, isoform C
3R	NT_033777.3	5803156	5808269	+	40721	CG11000	Dmel_CG11000	NP_001097690.1	332	uncharacterized protein Dmel_CG11000, isoform B
3R	NT_033777.3	5815230	5818758	+	40722	CG42675	Dmel_CG42675	NP_001189181.1	383	uncharacterized protein Dmel_CG42675, isoform F
3R	NT_033777.3	5815230	5818758	+	40722	CG42675	Dmel_CG42675	NP_731012.1	383	uncharacterized protein Dmel_CG42675, isoform C
3R	NT_033777.3	5815230	5818758	+	40722	CG42675	Dmel_CG42675	NP_649593.1	383	uncharacterized protein Dmel_CG42675, isoform B
3R	NT_033777.3	5816759	5818758	+	40722	CG42675	Dmel_CG42675	NP_001189180.1	412	uncharacterized protein Dmel_CG42675, isoform E
3R	NT_033777.3	5817094	5818758	+	40722	CG42675	Dmel_CG42675	NP_001262302.1	427	uncharacterized protein Dmel_CG42675, isoform G
3R	NT_033777.3	5818134	5818758	+	40722	CG42675	Dmel_CG42675	NP_731014.1	187	uncharacterized protein Dmel_CG42675, isoform D
3R	NT_033777.3	5818891	5821332	-	40723	Hpr1	Dmel_CG2031	NP_649594.1	701	Hpr1
3R	NT_033777.3	5822081	5822347	+	30522393	CG46303	Dmel_CG46303	NP_001334689.1	88	uncharacterized protein Dmel_CG46303
3R	NT_033777.3	5823705	5824441	-	40724	CG2023	Dmel_CG2023	NP_649595.1	227	CG2023, isoform A
3R	NT_033777.3	5823705	5824441	-	40724	CG2023	Dmel_CG2023	NP_001287187.1	227	CG2023, isoform B
3R	NT_033777.3	5824949	5826238	+	40725	dgrn	Dmel_CG10981	NP_731017.1	312	degringolade, isoform B
3R	NT_033777.3	5824949	5826238	+	40725	dgrn	Dmel_CG10981	NP_649596.1	319	degringolade, isoform A
3R	NT_033777.3	5825351	5826238	+	40725	dgrn	Dmel_CG10981	NP_001287188.1	205	degringolade, isoform D
3R	NT_033777.3	5830154	5831350	+	40726	glob3	Dmel_CG14675	NP_649597.3	196	globin 3
3R	NT_033777.3	5831825	5838283	+	40727	CG1208	Dmel_CG1208	NP_649598.1	496	CG1208, isoform B
3R	NT_033777.3	5835307	5838283	+	40727	CG1208	Dmel_CG1208	NP_001097692.1	502	CG1208, isoform C
3R	NT_033777.3	5844559	5846411	+	40728	CG1213	Dmel_CG1213	NP_001246937.1	491	CG1213, isoform D
3R	NT_033777.3	5844559	5846411	+	40728	CG1213	Dmel_CG1213	NP_731021.1	491	CG1213, isoform C
3R	NT_033777.3	5844559	5846411	+	40728	CG1213	Dmel_CG1213	NP_731020.1	491	CG1213, isoform B
3R	NT_033777.3	5844559	5846411	+	40728	CG1213	Dmel_CG1213	NP_649599.1	491	CG1213, isoform A
3R	NT_033777.3	5847298	5848032	+	40729	CG14676	Dmel_CG14676	NP_649600.1	244	uncharacterized protein Dmel_CG14676
3R	NT_033777.3	5850521	5855908	-	44274	disp	Dmel_CG2019	NP_524734.2	1218	dispatched
3R	NT_033777.3	5853396	5854103	+	5740126	CG34287	Dmel_CG34287	NP_001097693.1	235	uncharacterized protein Dmel_CG34287
3R	NT_033777.3	5856671	5857900	+	40732	ECSIT	Dmel_CG10610	NP_649602.2	409	ECSIT
3R	NT_033777.3	5858312	5860395	-	40733	CG2017	Dmel_CG2017	NP_731025.1	604	CG2017, isoform C
3R	NT_033777.3	5858312	5862277	-	40733	CG2017	Dmel_CG2017	NP_649603.3	643	CG2017, isoform A
3R	NT_033777.3	5858312	5860395	-	40733	CG2017	Dmel_CG2017	NP_001138012.1	604	CG2017, isoform E
3R	NT_033777.3	5858312	5860395	-	40733	CG2017	Dmel_CG2017	NP_731026.1	604	CG2017, isoform D
3R	NT_033777.3	5858312	5860395	-	40733	CG2017	Dmel_CG2017	NP_731024.1	604	CG2017, isoform B
3R	NT_033777.3	5865149	5939523	-	4379844	CG34113	Dmel_CG34113	NP_001036682.1	1056	uncharacterized protein Dmel_CG34113, isoform P
3R	NT_033777.3	5865149	5939523	-	4379844	CG34113	Dmel_CG34113	NP_001036681.1	1689	uncharacterized protein Dmel_CG34113, isoform O
3R	NT_033777.3	5960482	5960945	-	50152	CG11373	Dmel_CG11373	NP_652319.1	59	uncharacterized protein Dmel_CG11373
3R	NT_033777.3	5972298	5973382	-	40737	Obp83a	Dmel_CG11421	NP_001287190.1	174	Odorant-binding protein 83a, isoform C
3R	NT_033777.3	5972298	5973322	-	40737	Obp83a	Dmel_CG11421	NP_001287189.1	154	Odorant-binding protein 83a, isoform B
3R	NT_033777.3	5972298	5973322	-	40737	Obp83a	Dmel_CG11421	NP_524241.1	154	Odorant-binding protein 83a, isoform A
3R	NT_033777.3	5976265	5976803	-	40738	Obp83b	Dmel_CG11422	NP_524242.2	141	Odorant-binding protein 83b
3R	NT_033777.3	6001163	6008038	-	40739	Rm62	Dmel_CG10279	NP_731031.1	575	Rm62, isoform D
3R	NT_033777.3	6001163	6008038	-	40739	Rm62	Dmel_CG10279	NP_001163528.1	575	Rm62, isoform H
3R	NT_033777.3	6001163	6005960	-	40739	Rm62	Dmel_CG10279	NP_731032.1	578	Rm62, isoform E
3R	NT_033777.3	6001163	6005216	-	40739	Rm62	Dmel_CG10279	NP_731034.1	578	Rm62, isoform F
3R	NT_033777.3	6001163	6005216	-	40739	Rm62	Dmel_CG10279	NP_731035.2	578	Rm62, isoform B
3R	NT_033777.3	6001163	6005216	-	40739	Rm62	Dmel_CG10279	NP_731033.1	578	Rm62, isoform C
3R	NT_033777.3	6001163	6005960	-	40739	Rm62	Dmel_CG10279	NP_001189182.1	578	Rm62, isoform I
3R	NT_033777.3	6001163	6008470	-	40739	Rm62	Dmel_CG10279	NP_524243.2	719	Rm62, isoform A
3R	NT_033777.3	6002636	6008038	-	40739	Rm62	Dmel_CG10279	NP_001246941.1	478	Rm62, isoform M
3R	NT_033777.3	6002647	6008038	-	40739	Rm62	Dmel_CG10279	NP_001246939.1	485	Rm62, isoform K
3R	NT_033777.3	6003028	6008038	-	40739	Rm62	Dmel_CG10279	NP_001246940.1	473	Rm62, isoform L
3R	NT_033777.3	6003647	6008038	-	40739	Rm62	Dmel_CG10279	NP_001246938.1	458	Rm62, isoform J
3R	NT_033777.3	6010573	6011932	-	40740	CG10280	Dmel_CG10280	NP_001246942.1	362	uncharacterized protein Dmel_CG10280, isoform B
3R	NT_033777.3	6010573	6011932	-	40740	CG10280	Dmel_CG10280	NP_649607.1	356	uncharacterized protein Dmel_CG10280, isoform A
3R	NT_033777.3	6026192	6027202	-	40741	CG11459	Dmel_CG11459	NP_649608.1	336	uncharacterized protein Dmel_CG11459, isoform A
3R	NT_033777.3	6026192	6027202	-	40741	CG11459	Dmel_CG11459	NP_001287191.1	336	uncharacterized protein Dmel_CG11459, isoform B
3R	NT_033777.3	6054805	6057490	-	40743	CG15580	Dmel_CG15580	NP_649610.1	743	uncharacterized protein Dmel_CG15580
3R	NT_033777.3	6076804	6078283	-	40744	Or83c	Dmel_CG15581	NP_524244.2	397	odorant receptor 83c
3R	NT_033777.3	6089639	6100752	-	40745	Gasp	Dmel_CG10287	NP_001097694.1	235	gasp, isoform B
3R	NT_033777.3	6093551	6100752	-	40745	Gasp	Dmel_CG10287	NP_649611.2	258	gasp, isoform A
3R	NT_033777.3	6108187	6109616	+	40746	Obp83cd	Dmel_CG15582	NP_649612.1	242	Odorant-binding protein 83cd
3R	NT_033777.3	6109779	6111008	-	40747	Obp83ef	Dmel_CG31557	NP_731042.1	245	Odorant-binding protein 83ef
3R	NT_033777.3	6111743	6112246	-	170878	Obp83g	Dmel_CG31558	NP_731043.1	146	Odorant-binding protein 83g
3R	NT_033777.3	6122657	6123270	+	40748	Vha14-2	Dmel_CG1076	NP_001246943.1	124	vacuolar 
3R	NT_033777.3	6122657	6123270	+	40748	Vha14-2	Dmel_CG1076	NP_001246944.1	124	vacuolar 
3R	NT_033777.3	6122744	6123270	+	40748	Vha14-2	Dmel_CG1076	NP_649614.1	129	vacuolar 
3R	NT_033777.3	6150575	6157056	-	40749	CG31559	Dmel_CG31559	NP_731045.1	454	uncharacterized protein Dmel_CG31559
3R	NT_033777.3	6167518	6170235	+	40751	CG1077	Dmel_CG1077	NP_649617.1	730	CG1077
3R	NT_033777.3	6173645	6174833	+	40752	Osi1	Dmel_CG15585	NP_649618.1	308	osiris 1
3R	NT_033777.3	6189198	6194149	+	40754	NPFR	Dmel_CG1147	NP_524245.3	485	neuropeptide F receptor, isoform A
3R	NT_033777.3	6189198	6194873	+	40754	NPFR	Dmel_CG1147	NP_001246947.1	489	neuropeptide F receptor, isoform D
3R	NT_033777.3	6189198	6194149	+	40754	NPFR	Dmel_CG1147	NP_001246946.1	462	neuropeptide F receptor, isoform C
3R	NT_033777.3	6189198	6194873	+	40754	NPFR	Dmel_CG1147	NP_001246945.1	466	neuropeptide F receptor, isoform B
3R	NT_033777.3	6204445	6207181	+	40755	Osi24	Dmel_CG15589	NP_649620.2	533	osiris 24
3R	NT_033777.3	6211462	6213381	+	40756	Osi2	Dmel_CG1148	NP_001262303.1	390	osiris 2, isoform C
3R	NT_033777.3	6211462	6213381	+	40756	Osi2	Dmel_CG1148	NP_731052.2	390	osiris 2, isoform A
3R	NT_033777.3	6211462	6213381	+	40756	Osi2	Dmel_CG1148	NP_649621.1	390	osiris 2, isoform B
3R	NT_033777.3	6216064	6217917	+	40757	Osi3	Dmel_CG1150	NP_001262304.1	288	osiris 3, isoform B
3R	NT_033777.3	6216064	6217917	+	40757	Osi3	Dmel_CG1150	NP_649622.2	288	osiris 3, isoform A
3R	NT_033777.3	6218533	6221662	-	40758	Osi4	Dmel_CG10303	NP_649623.2	393	osiris 4, isoform A
3R	NT_033777.3	6218533	6221662	-	40758	Osi4	Dmel_CG10303	NP_001262305.1	395	osiris 4, isoform B
3R	NT_033777.3	6227706	6228739	+	40759	Osi5	Dmel_CG15590	NP_649624.1	202	osiris 5, isoform A
3R	NT_033777.3	6227706	6228739	+	40759	Osi5	Dmel_CG15590	NP_001189183.1	201	osiris 5, isoform B
3R	NT_033777.3	6234736	6236302	+	40760	Osi6	Dmel_CG1151	NP_649625.2	312	osiris 6, isoform A
3R	NT_033777.3	6234736	6236302	+	40760	Osi6	Dmel_CG1151	NP_001287192.1	312	osiris 6, isoform B
3R	NT_033777.3	6249207	6250073	+	40761	Osi7	Dmel_CG1153	NP_649626.1	288	osiris 7
3R	NT_033777.3	6255275	6256392	+	40762	Osi8	Dmel_CG15591	NP_649627.1	274	osiris 8
3R	NT_033777.3	6260413	6261649	+	40763	Osi9	Dmel_CG15592	NP_649628.2	233	osiris 9
3R	NT_033777.3	6263976	6267395	+	40764	Osi10	Dmel_CG15593	NP_731058.1	576	osiris 10
3R	NT_033777.3	6267780	6268688	-	40765	Osi11	Dmel_CG15596	NP_649630.1	302	osiris 11
3R	NT_033777.3	6278707	6281804	+	40766	Osi12	Dmel_CG1154	NP_649631.1	295	osiris 12
3R	NT_033777.3	6284651	6285160	-	40767	CG15597	Dmel_CG15597	NP_649632.2	149	uncharacterized protein Dmel_CG15597
3R	NT_033777.3	6287867	6289476	+	40768	CG15594	Dmel_CG15594	NP_731062.1	323	uncharacterized protein Dmel_CG15594
3R	NT_033777.3	6291902	6292769	+	40769	Osi13	Dmel_CG15595	NP_649634.1	210	osiris 13
3R	NT_033777.3	6299251	6300577	+	40770	Osi14	Dmel_CG1155	NP_649635.1	268	osiris 14
3R	NT_033777.3	6301913	6303175	+	40771	Osi15	Dmel_CG1157	NP_649636.1	214	osiris 15
3R	NT_033777.3	6305270	6306165	+	318801	Osi16	Dmel_CG31561	NP_731065.1	278	osiris 16
3R	NT_033777.3	6306905	6308961	+	26067064	CG46026	Dmel_CG46026	NP_001303496.1	666	uncharacterized protein Dmel_CG46026
3R	NT_033777.3	6309996	6310890	+	40772	CG31560	Dmel_CG31560	NP_731067.1	279	uncharacterized protein Dmel_CG31560
3R	NT_033777.3	6315887	6326797	+	40774	Osi17	Dmel_CG15598	NP_649638.2	648	osiris 17, isoform A
3R	NT_033777.3	6315887	6326797	+	40774	Osi17	Dmel_CG15598	NP_001262308.1	750	osiris 17, isoform D
3R	NT_033777.3	6315887	6326797	+	40774	Osi17	Dmel_CG15598	NP_001262307.1	750	osiris 17, isoform C
3R	NT_033777.3	6315887	6326797	+	40774	Osi17	Dmel_CG15598	NP_001262306.1	648	osiris 17, isoform B
3R	NT_033777.3	6330351	6331563	+	40775	Osi18	Dmel_CG1169	NP_649639.1	306	osiris 18
3R	NT_033777.3	6335443	6336940	+	40776	Osi19	Dmel_CG15189	NP_649640.1	266	osiris 19, isoform A
3R	NT_033777.3	6335443	6336940	+	40776	Osi19	Dmel_CG15189	NP_001163529.1	257	osiris 19, isoform B
3R	NT_033777.3	6340188	6341096	+	40777	Osi20	Dmel_CG15188	NP_649641.1	280	osiris 20
3R	NT_033777.3	6342001	6342836	+	40778	CG17917	Dmel_CG17917	NP_649642.1	211	uncharacterized protein Dmel_CG17917
3R	NT_033777.3	6343070	6343686	+	40779	CG10298	Dmel_CG10298	NP_649643.1	187	uncharacterized protein Dmel_CG10298
3R	NT_033777.3	6344121	6345010	+	40780	CG17919	Dmel_CG17919	NP_649644.1	202	uncharacterized protein Dmel_CG17919
3R	NT_033777.3	6345279	6345772	-	40781	SmD2	Dmel_CG1249	NP_649645.1	119	small ribonucleoprotein particle protein SmD2
3R	NT_033777.3	6346193	6347518	+	40782	CG18048	Dmel_CG18048	NP_649646.3	441	uncharacterized protein Dmel_CG18048
3R	NT_033777.3	6349243	6350512	+	40783	Hr83	Dmel_CG10296	NP_649647.1	278	hormone receptor 83
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001262312.1	840	p21-activated kinase, isoform I
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001262311.1	840	p21-activated kinase, isoform H
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001262309.1	704	p21-activated kinase, isoform E
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_731073.1	704	p21-activated kinase, isoform A
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001262313.1	704	p21-activated kinase, isoform J
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001138013.2	840	p21-activated kinase, isoform G
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_524681.1	704	p21-activated kinase, isoform B
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_731074.1	704	p21-activated kinase, isoform C
3R	NT_033777.3	6355021	6359465	+	44039	Pak	Dmel_CG10295	NP_001262310.1	840	p21-activated kinase, isoform F
3R	NT_033777.3	6361785	6368085	-	40785	CG42724	Dmel_CG42724	NP_001262314.1	1123	uncharacterized protein Dmel_CG42724, isoform K
3R	NT_033777.3	6361785	6368085	-	40785	CG42724	Dmel_CG42724	NP_001189184.1	1123	uncharacterized protein Dmel_CG42724, isoform C
3R	NT_033777.3	6364591	6368085	-	40785	CG42724	Dmel_CG42724	NP_001287193.1	763	uncharacterized protein Dmel_CG42724, isoform L
3R	NT_033777.3	6364591	6368085	-	40785	CG42724	Dmel_CG42724	NP_788585.1	763	uncharacterized protein Dmel_CG42724, isoform E
3R	NT_033777.3	6364591	6368085	-	40785	CG42724	Dmel_CG42724	NP_001189186.1	763	uncharacterized protein Dmel_CG42724, isoform I
3R	NT_033777.3	6364875	6368085	-	40785	CG42724	Dmel_CG42724	NP_001287194.1	761	uncharacterized protein Dmel_CG42724, isoform M
3R	NT_033777.3	6365950	6368085	-	40785	CG42724	Dmel_CG42724	NP_001036683.1	669	uncharacterized protein Dmel_CG42724, isoform G
3R	NT_033777.3	6369017	6370894	+	40786	CG10286	Dmel_CG10286	NP_649649.1	625	uncharacterized protein Dmel_CG10286
3R	NT_033777.3	6371237	6373340	-	40787	CRAT	Dmel_CG1041	NP_001303419.1	638	carnitine O-Acetyl-Transferase, isoform E
3R	NT_033777.3	6371237	6373845	-	40787	CRAT	Dmel_CG1041	NP_001287195.1	662	carnitine O-Acetyl-Transferase, isoform D
3R	NT_033777.3	6371237	6373476	-	40787	CRAT	Dmel_CG1041	NP_001036684.1	657	carnitine O-Acetyl-Transferase, isoform B
3R	NT_033777.3	6371237	6373845	-	40787	CRAT	Dmel_CG1041	NP_649650.2	662	carnitine O-Acetyl-Transferase, isoform A
3R	NT_033777.3	6374479	6377268	+	40788	CG42564	Dmel_CG42564	NP_649651.2	500	uncharacterized protein Dmel_CG42564
3R	NT_033777.3	6377820	6378153	+	8674074	CG42537	Dmel_CG42537	NP_001163530.1	90	uncharacterized protein Dmel_CG42537
3R	NT_033777.3	6378470	6380164	-	40789	CG1024	Dmel_CG1024	NP_001138014.2	543	CG1024, isoform E
3R	NT_033777.3	6378470	6380152	-	40789	CG1024	Dmel_CG1024	NP_649652.4	539	CG1024, isoform B
3R	NT_033777.3	6378470	6380164	-	40789	CG1024	Dmel_CG1024	NP_001262315.1	543	CG1024, isoform D
3R	NT_033777.3	6380596	6382529	+	40790	TfIIFalpha	Dmel_CG10281	NP_524246.1	577	transcription factor IIFalpha
3R	NT_033777.3	6385148	6387312	+	40791	godzilla	Dmel_CG10277	NP_649653.1	536	godzilla E3 ubiquitin protein ligase, isoform A
3R	NT_033777.3	6385148	6387312	+	40791	godzilla	Dmel_CG10277	NP_731079.1	536	godzilla E3 ubiquitin protein ligase, isoform B
3R	NT_033777.3	6385148	6387312	+	40791	godzilla	Dmel_CG10277	NP_731080.1	536	godzilla E3 ubiquitin protein ligase, isoform C
3R	NT_033777.3	6385148	6387312	+	40791	godzilla	Dmel_CG10277	NP_001097695.1	536	godzilla E3 ubiquitin protein ligase, isoform D
3R	NT_033777.3	6389559	6392007	-	40792	Dmtn	Dmel_CG1021	NP_001138015.1	638	dementin, isoform F
3R	NT_033777.3	6389559	6393873	-	40792	Dmtn	Dmel_CG1021	NP_001163531.1	679	dementin, isoform H
3R	NT_033777.3	6389559	6392007	-	40792	Dmtn	Dmel_CG1021	NP_649654.3	638	dementin, isoform E
3R	NT_033777.3	6389559	6391593	-	40792	Dmtn	Dmel_CG1021	NP_001138016.1	500	dementin, isoform G
3R	NT_033777.3	6389559	6392007	-	40792	Dmtn	Dmel_CG1021	NP_731081.2	638	dementin, isoform D
3R	NT_033777.3	6437656	6444627	+	40793	gpp	Dmel_CG42803	NP_001262316.1	1898	grappa, isoform F
3R	NT_033777.3	6437656	6447493	+	40793	gpp	Dmel_CG42803	NP_731085.2	2137	grappa, isoform D
3R	NT_033777.3	6437656	6445701	+	40793	gpp	Dmel_CG42803	NP_731084.1	1848	grappa, isoform B
3R	NT_033777.3	6437656	6445701	+	40793	gpp	Dmel_CG42803	NP_731083.1	1848	grappa, isoform C
3R	NT_033777.3	6437656	6445701	+	40793	gpp	Dmel_CG42803	NP_649655.1	1848	grappa, isoform E
3R	NT_033777.3	6451702	6456021	-	40794	CG9727	Dmel_CG9727	NP_001262317.1	1329	CG9727, isoform B
3R	NT_033777.3	6451849	6456021	-	40794	CG9727	Dmel_CG9727	NP_649656.1	1280	CG9727, isoform A
3R	NT_033777.3	6451849	6456021	-	40794	CG9727	Dmel_CG9727	NP_001262318.1	1280	CG9727, isoform C
3R	NT_033777.3	6457287	6458673	+	40795	Zif	Dmel_CG10267	NP_001262319.1	388	Zinc-finger protein, isoform C
3R	NT_033777.3	6457287	6458673	+	40795	Zif	Dmel_CG10267	NP_001189188.1	388	Zinc-finger protein, isoform B
3R	NT_033777.3	6457287	6458673	+	40795	Zif	Dmel_CG10267	NP_649657.1	388	Zinc-finger protein, isoform A
3R	NT_033777.3	6468673	6470844	+	40796	Neurochondrin	Dmel_CG2330	NP_649658.1	723	neurochondrin
3R	NT_033777.3	6479255	6494272	+	40797	CG15186	Dmel_CG15186	NP_001246950.1	1120	uncharacterized protein Dmel_CG15186, isoform F
3R	NT_033777.3	6479255	6494272	+	40797	CG15186	Dmel_CG15186	NP_001246949.1	971	uncharacterized protein Dmel_CG15186, isoform E
3R	NT_033777.3	6483156	6494272	+	40797	CG15186	Dmel_CG15186	NP_649659.2	1072	uncharacterized protein Dmel_CG15186, isoform A
3R	NT_033777.3	6483156	6494272	+	40797	CG15186	Dmel_CG15186	NP_996158.1	923	uncharacterized protein Dmel_CG15186, isoform C
3R	NT_033777.3	6484727	6494272	+	40797	CG15186	Dmel_CG15186	NP_001287198.1	931	uncharacterized protein Dmel_CG15186, isoform H
3R	NT_033777.3	6484727	6494272	+	40797	CG15186	Dmel_CG15186	NP_001246948.2	931	uncharacterized protein Dmel_CG15186, isoform M
3R	NT_033777.3	6484727	6494272	+	40797	CG15186	Dmel_CG15186	NP_001287199.1	1080	uncharacterized protein Dmel_CG15186, isoform I
3R	NT_033777.3	6484727	6494272	+	40797	CG15186	Dmel_CG15186	NP_001287197.1	931	uncharacterized protein Dmel_CG15186, isoform L
3R	NT_033777.3	6487244	6494272	+	40797	CG15186	Dmel_CG15186	NP_001246951.1	942	uncharacterized protein Dmel_CG15186, isoform G
3R	NT_033777.3	6487244	6494272	+	40797	CG15186	Dmel_CG15186	NP_731089.2	1091	uncharacterized protein Dmel_CG15186, isoform B
3R	NT_033777.3	6489506	6494272	+	40797	CG15186	Dmel_CG15186	NP_001287196.1	931	uncharacterized protein Dmel_CG15186, isoform K
3R	NT_033777.3	6489652	6494272	+	40797	CG15186	Dmel_CG15186	NP_001287200.1	907	uncharacterized protein Dmel_CG15186, isoform J
3R	NT_033777.3	6527529	6528557	+	40798	CG15185	Dmel_CG15185	NP_649660.1	342	uncharacterized protein Dmel_CG15185
3R	NT_033777.3	6531668	6566255	-	40800	dpr11	Dmel_CG33202	NP_001262320.1	360	defective proboscis extension response 11, isoform C
3R	NT_033777.3	6531668	6566255	-	40800	dpr11	Dmel_CG33202	NP_788586.1	360	defective proboscis extension response 11, isoform B
3R	NT_033777.3	6549218	6549574	+	170876	Pif2	Dmel_CG31483	NP_731093.2	118	PFTAIRE-interacting factor 2
3R	NT_033777.3	6558715	6560225	-	40803	CG1137	Dmel_CG1137	NP_649665.2	379	CG1137
3R	NT_033777.3	6580917	6582015	+	40804	CG2336	Dmel_CG2336	NP_731094.3	322	CG2336
3R	NT_033777.3	6597064	6597936	-	40805	CG1138	Dmel_CG1138	NP_649667.1	290	CG1138
3R	NT_033777.3	6601310	6602065	+	40806	CG31482	Dmel_CG31482	NP_731097.1	195	uncharacterized protein Dmel_CG31482
3R	NT_033777.3	6607597	6608838	-	40807	glob2	Dmel_CG15180	NP_001262321.1	219	globin 2, isoform C
3R	NT_033777.3	6607991	6608838	-	40807	glob2	Dmel_CG15180	NP_001262322.1	209	globin 2, isoform D
3R	NT_033777.3	6607991	6608838	-	40807	glob2	Dmel_CG15180	NP_649669.3	222	globin 2, isoform B
3R	NT_033777.3	6626959	6627753	-	40809	sowi	Dmel_CG15178	NP_649671.2	217	solwind
3R	NT_033777.3	6628408	6629190	-	40810	CG15177	Dmel_CG15177	NP_649672.1	225	uncharacterized protein Dmel_CG15177, isoform A
3R	NT_033777.3	6628408	6629190	-	40810	CG15177	Dmel_CG15177	NP_001262323.1	217	uncharacterized protein Dmel_CG15177, isoform B
3R	NT_033777.3	6630245	6631020	+	40811	sunz	Dmel_CG15179	NP_649673.1	220	sungrazer
3R	NT_033777.3	6641322	6642165	+	318662	CG31286	Dmel_CG31286	NP_731103.1	205	uncharacterized protein Dmel_CG31286
3R	NT_033777.3	6642410	6644386	-	40812	CG1315	Dmel_CG1315	NP_649674.1	419	CG1315, isoform A
3R	NT_033777.3	6642410	6644386	-	40812	CG1315	Dmel_CG1315	NP_001262324.1	419	CG1315, isoform B
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_001287201.1	2097	TBP-associated factor 1, isoform F
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_996160.1	2129	TBP-associated factor 1, isoform B
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_996159.1	2098	TBP-associated factor 1, isoform C
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_001163532.1	2096	TBP-associated factor 1, isoform D
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_476956.3	2065	TBP-associated factor 1, isoform A
3R	NT_033777.3	6646990	6655795	+	40813	Taf1	Dmel_CG17603	NP_001246952.1	2172	TBP-associated factor 1, isoform E
3R	NT_033777.3	6656522	6657336	-	40814	CG1307	Dmel_CG1307	NP_001287202.1	186	CG1307, isoform E
3R	NT_033777.3	6656522	6657336	-	40814	CG1307	Dmel_CG1307	NP_649675.2	186	CG1307, isoform C
3R	NT_033777.3	6658029	6659292	+	40815	twr	Dmel_CG2358	NP_649676.1	185	twisted bristles roughened eye
3R	NT_033777.3	6659438	6660022	-	40816	agt	Dmel_CG1303	NP_001303422.1	194	O-6-alkylguanine-DNA alkyltransferase, isoform B
3R	NT_033777.3	6659438	6660022	-	40816	agt	Dmel_CG1303	NP_477366.1	194	O-6-alkylguanine-DNA alkyltransferase, isoform A
3R	NT_033777.3	6662068	6662954	-	40817	lab	Dmel_CG1264	NP_001246953.1	213	labial, isoform B
3R	NT_033777.3	6662068	6678346	-	40817	lab	Dmel_CG1264	NP_476613.1	629	labial, isoform A
3R	NT_033777.3	6684506	6685133	+	40818	Edg84A	Dmel_CG2345	NP_524247.1	188	Ecdysone-dependent gene 84A
3R	NT_033777.3	6686774	6687564	+	40819	Ccp84Ag	Dmel_CG2342	NP_649677.1	191	Ccp84Ag
3R	NT_033777.3	6689673	6690186	-	40820	Ccp84Af	Dmel_CG1331	NP_649678.1	151	Ccp84Af
3R	NT_033777.3	6690959	6691703	-	40821	Ccp84Ae	Dmel_CG1330	NP_649679.1	208	Ccp84Ae
3R	NT_033777.3	6692798	6693458	+	40822	Ccp84Ad	Dmel_CG2341	NP_649680.1	199	Ccp84Ad
3R	NT_033777.3	6695465	6696182	-	40823	Ccp84Ac	Dmel_CG1327	NP_649681.1	217	Ccp84Ac
3R	NT_033777.3	6702078	6702819	-	40824	Ccp84Ab	Dmel_CG1252	NP_649682.1	221	Ccp84Ab
3R	NT_033777.3	6704147	6704819	+	40825	Ccp84Aa	Dmel_CG2360	NP_649683.1	205	Ccp84Aa
3R	NT_033777.3	6708208	6740099	-	40826	pb	Dmel_CG31481	NP_476669.3	782	proboscipedia, isoform A
3R	NT_033777.3	6708208	6740099	-	40826	pb	Dmel_CG31481	NP_996161.1	772	proboscipedia, isoform D
3R	NT_033777.3	6708208	6740099	-	40826	pb	Dmel_CG31481	NP_996163.1	777	proboscipedia, isoform B
3R	NT_033777.3	6708208	6740099	-	40826	pb	Dmel_CG31481	NP_996162.1	777	proboscipedia, isoform C
3R	NT_033777.3	6743249	6743947	-	40827	zen2	Dmel_CG1048	NP_001138017.1	232	zerknullt-related, isoform B
3R	NT_033777.3	6743249	6744074	-	40827	zen2	Dmel_CG1048	NP_476794.1	252	zerknullt-related, isoform A
3R	NT_033777.3	6747092	6747963	-	5740802	CG34297	Dmel_CG34297	NP_001097696.1	233	uncharacterized protein Dmel_CG34297
3R	NT_033777.3	6753023	6754148	-	40828	zen	Dmel_CG1046	NP_476793.1	353	zerknullt
3R	NT_033777.3	6756676	6758484	-	40830	bcd	Dmel_CG1034	NP_788588.1	413	bicoid, isoform F
3R	NT_033777.3	6756676	6759271	-	40830	bcd	Dmel_CG1034	NP_731111.1	489	bicoid, isoform D
3R	NT_033777.3	6756676	6759271	-	40830	bcd	Dmel_CG1034	NP_476825.1	149	bicoid, isoform A
3R	NT_033777.3	6756676	6759271	-	40830	bcd	Dmel_CG1034	NP_788587.1	494	bicoid, isoform G
3R	NT_033777.3	6756676	6758484	-	40830	bcd	Dmel_CG1034	NP_731113.2	418	bicoid, isoform E
3R	NT_033777.3	6762980	6764841	+	40831	Ama	Dmel_CG2198	NP_731114.2	341	amalgam, isoform B
3R	NT_033777.3	6763840	6764841	+	40831	Ama	Dmel_CG2198	NP_788589.1	333	amalgam, isoform C
3R	NT_033777.3	6763840	6764841	+	40831	Ama	Dmel_CG2198	NP_476579.1	333	amalgam, isoform A
3R	NT_033777.3	6792325	6801939	+	40832	Dfd	Dmel_CG2189	NP_477201.1	586	deformed
3R	NT_033777.3	6825382	6842180	-	40833	Scr	Dmel_CG1030	NP_524248.2	417	Sex combs reduced, isoform A
3R	NT_033777.3	6825382	6842180	-	40833	Scr	Dmel_CG1030	NP_996165.1	417	Sex combs reduced, isoform B
3R	NT_033777.3	6864394	6865773	+	40834	ftz	Dmel_CG2047	NP_477498.1	410	fushi tarazu
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996171.1	374	antennapedia, isoform N
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996167.1	378	antennapedia, isoform J
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996175.1	378	antennapedia, isoform M
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996168.1	378	antennapedia, isoform I
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996170.1	378	antennapedia, isoform L
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996172.1	365	antennapedia, isoform E
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996169.1	365	antennapedia, isoform F
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996174.1	374	antennapedia, isoform D
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996173.1	361	antennapedia, isoform G
3R	NT_033777.3	6898288	6909910	-	40835	Antp	Dmel_CG1028	NP_996166.1	361	antennapedia, isoform K
3R	NT_033777.3	6908505	6909910	-	40835	Antp	Dmel_CG1028	NP_996176.1	297	antennapedia, isoform H
3R	NT_033777.3	7052596	7054498	+	40836	Sodh-1	Dmel_CG1982	NP_001287203.1	360	sorbitol dehydrogenase 1, isoform B
3R	NT_033777.3	7052596	7054498	+	40836	Sodh-1	Dmel_CG1982	NP_477348.1	360	sorbitol dehydrogenase 1, isoform A
3R	NT_033777.3	7054658	7058462	+	40837	CG1979	Dmel_CG1979	NP_649685.1	1047	CG1979
3R	NT_033777.3	7059398	7060202	+	40838	dj	Dmel_CG1980	NP_731118.3	248	don juan, isoform A
3R	NT_033777.3	7059468	7060202	+	40838	dj	Dmel_CG1980	NP_477220.3	218	don juan, isoform B
3R	NT_033777.3	7059639	7060202	+	40838	dj	Dmel_CG1980	NP_001246955.1	187	don juan, isoform C
3R	NT_033777.3	7060891	7061806	+	40839	djl	Dmel_CG1984	NP_649686.2	286	don juan like
3R	NT_033777.3	7062320	7064056	+	40840	CG1988	Dmel_CG1988	NP_001163534.1	556	CG1988, isoform C
3R	NT_033777.3	7062320	7064056	+	40840	CG1988	Dmel_CG1988	NP_788591.1	578	CG1988, isoform B
3R	NT_033777.3	7062320	7064056	+	40840	CG1988	Dmel_CG1988	NP_649687.2	530	CG1988, isoform D
3R	NT_033777.3	7064615	7067038	-	40841	CG1105	Dmel_CG1105	NP_649688.1	422	CG1105
3R	NT_033777.3	7067510	7071324	+	40842	CG1965	Dmel_CG1965	NP_649689.1	905	CG1965, isoform A
3R	NT_033777.3	7067510	7068711	+	40842	CG1965	Dmel_CG1965	NP_001262325.1	176	CG1965, isoform C
3R	NT_033777.3	7067510	7069196	+	40842	CG1965	Dmel_CG1965	NP_001246956.1	317	CG1965, isoform B
3R	NT_033777.3	7071722	7074325	-	40843	Ufl1	Dmel_CG1104	NP_001246957.1	782	UFM1 specific ligase 1, isoform C
3R	NT_033777.3	7071722	7074325	-	40843	Ufl1	Dmel_CG1104	NP_649690.1	782	UFM1 specific ligase 1, isoform A
3R	NT_033777.3	7076919	7077275	+	40844	CG1943	Dmel_CG1943	NP_731126.1	118	CG1943, isoform B
3R	NT_033777.3	7076919	7077275	+	40844	CG1943	Dmel_CG1943	NP_649691.1	118	CG1943, isoform A
3R	NT_033777.3	7076919	7077275	+	40844	CG1943	Dmel_CG1943	NP_731127.1	118	CG1943, isoform C
3R	NT_033777.3	7076919	7077275	+	40844	CG1943	Dmel_CG1943	NP_001262326.1	118	CG1943, isoform D
3R	NT_033777.3	7078253	7080209	-	44029	Ref1	Dmel_CG1101	NP_651968.1	266	RNA and export factor binding protein 1
3R	NT_033777.3	7082277	7083143	+	40846	Dpck	Dmel_CG1939	NP_649692.2	236	Dephospho-CoA kinase
3R	NT_033777.3	7083382	7085980	-	40847	Tailor	Dmel_CG1091	NP_001262327.1	563	tailor, isoform C
3R	NT_033777.3	7083382	7085446	-	40847	Tailor	Dmel_CG1091	NP_731129.1	505	tailor, isoform A
3R	NT_033777.3	7083382	7085980	-	40847	Tailor	Dmel_CG1091	NP_649693.3	560	tailor, isoform B
3R	NT_033777.3	7086742	7088583	+	40848	alphaTub84B	Dmel_CG1913	NP_476772.1	450	alpha-Tubulin at 84B
3R	NT_033777.3	7094124	7094542	+	50143	e(y)2b	Dmel_CG14612	NP_001287204.1	95	enhancer of yellow 2b, isoform B
3R	NT_033777.3	7094124	7094542	+	50143	e(y)2b	Dmel_CG14612	NP_652310.1	95	enhancer of yellow 2b, isoform A
3R	NT_033777.3	7094889	7107644	-	40850	Alh	Dmel_CG1070	NP_001097697.2	1448	alhambra, isoform J
3R	NT_033777.3	7095802	7107644	-	40850	Alh	Dmel_CG1070	NP_001163537.1	1134	alhambra, isoform I
3R	NT_033777.3	7095802	7107644	-	40850	Alh	Dmel_CG1070	NP_001163536.1	1165	alhambra, isoform H
3R	NT_033777.3	7095802	7107644	-	40850	Alh	Dmel_CG1070	NP_001262331.1	1133	alhambra, isoform O
3R	NT_033777.3	7095821	7107644	-	40850	Alh	Dmel_CG1070	NP_001262330.1	1052	alhambra, isoform N
3R	NT_033777.3	7095821	7107644	-	40850	Alh	Dmel_CG1070	NP_731131.2	1084	alhambra, isoform M
3R	NT_033777.3	7098311	7123938	-	40850	Alh	Dmel_CG1070	NP_001262328.1	1385	alhambra, isoform K
3R	NT_033777.3	7098311	7121629	-	40850	Alh	Dmel_CG1070	NP_731132.1	1323	alhambra, isoform D
3R	NT_033777.3	7098311	7107644	-	40850	Alh	Dmel_CG1070	NP_001097698.1	1165	alhambra, isoform F
3R	NT_033777.3	7098311	7123938	-	40850	Alh	Dmel_CG1070	NP_001262332.1	1717	alhambra, isoform P
3R	NT_033777.3	7098311	7123938	-	40850	Alh	Dmel_CG1070	NP_524250.3	1376	alhambra, isoform A
3R	NT_033777.3	7098311	7121629	-	40850	Alh	Dmel_CG1070	NP_001262329.1	1332	alhambra, isoform L
3R	NT_033777.3	7098311	7107644	-	40850	Alh	Dmel_CG1070	NP_731133.1	824	alhambra, isoform B
3R	NT_033777.3	7114272	7115759	-	40849	Mlp84B	Dmel_CG1019	NP_001303418.1	495	muscle LIM protein at 84B, isoform C
3R	NT_033777.3	7114272	7115759	-	40849	Mlp84B	Dmel_CG1019	NP_477122.1	495	muscle LIM protein at 84B, isoform A
3R	NT_033777.3	7114272	7115759	-	40849	Mlp84B	Dmel_CG1019	NP_731134.1	495	muscle LIM protein at 84B, isoform B
3R	NT_033777.3	7124660	7126145	+	40851	CG10098	Dmel_CG10098	NP_649694.1	353	uncharacterized protein Dmel_CG10098
3R	NT_033777.3	7126772	7127822	-	40852	CG10068	Dmel_CG10068	NP_649695.1	316	uncharacterized protein Dmel_CG10068
3R	NT_033777.3	7129520	7130887	+	40853	CG31248	Dmel_CG31248	NP_001262333.1	251	uncharacterized protein Dmel_CG31248, isoform B
3R	NT_033777.3	7129520	7130887	+	40853	CG31248	Dmel_CG31248	NP_649696.1	251	uncharacterized protein Dmel_CG31248, isoform A
3R	NT_033777.3	7131675	7132546	+	318765	CG31493	Dmel_CG31493	NP_731135.2	246	uncharacterized protein Dmel_CG31493, isoform A
3R	NT_033777.3	7131675	7132546	+	318765	CG31493	Dmel_CG31493	NP_001189190.1	218	uncharacterized protein Dmel_CG31493, isoform B
3R	NT_033777.3	7137166	7141743	+	2768661	Fer1	Dmel_CG33323	NP_996177.1	251	48 related 1, isoform A
3R	NT_033777.3	7137166	7141743	+	2768661	Fer1	Dmel_CG33323	NP_001262334.1	256	48 related 1, isoform B
3R	NT_033777.3	7143759	7144256	-	40856	CG14610	Dmel_CG14610	NP_649698.2	147	uncharacterized protein Dmel_CG14610
3R	NT_033777.3	7144816	7151198	+	40857	CG2656	Dmel_CG2656	NP_649699.1	283	CG2656
3R	NT_033777.3	7146314	7150630	-	40858	gfzf	Dmel_CG33546	NP_001262335.1	1045	GST-containing FLYWCH zinc-finger protein, isoform E
3R	NT_033777.3	7146314	7147079	-	40858	gfzf	Dmel_CG33546	NP_001014609.2	234	GST-containing FLYWCH zinc-finger protein, isoform D
3R	NT_033777.3	7146314	7150630	-	40858	gfzf	Dmel_CG33546	NP_001014610.1	1045	GST-containing FLYWCH zinc-finger protein, isoform B
3R	NT_033777.3	7151408	7154164	+	40859	Sas-4	Dmel_CG10061	NP_649701.2	901	spindle assembly abnormal 4
3R	NT_033777.3	7154366	7155064	-	40860	MAGE	Dmel_CG10059	NP_649702.2	232	MAGE
3R	NT_033777.3	7164521	7183111	+	40861	sas	Dmel_CG2507	NP_476611.1	1348	stranded at second, isoform A
3R	NT_033777.3	7164521	7183111	+	40861	sas	Dmel_CG2507	NP_001262337.1	1693	stranded at second, isoform D
3R	NT_033777.3	7164521	7183111	+	40861	sas	Dmel_CG2507	NP_001262336.1	1348	stranded at second, isoform C
3R	NT_033777.3	7164521	7183111	+	40861	sas	Dmel_CG2507	NP_731141.1	1693	stranded at second, isoform B
3R	NT_033777.3	7184594	7186571	-	40862	CG10055	Dmel_CG10055	NP_649703.1	608	uncharacterized protein Dmel_CG10055
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001246960.1	673	like-AP180, isoform G
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001262339.1	776	like-AP180, isoform I
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001262338.1	704	like-AP180, isoform H
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001138019.2	758	like-AP180, isoform C
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001246959.1	685	like-AP180, isoform F
3R	NT_033777.3	7187412	7198425	+	40863	lap	Dmel_CG2520	NP_524252.2	468	like-AP180, isoform A
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001262340.1	678	like-AP180, isoform J
3R	NT_033777.3	7187412	7198510	+	40863	lap	Dmel_CG2520	NP_001163538.1	788	like-AP180, isoform D
3R	NT_033777.3	7187412	7194511	+	40863	lap	Dmel_CG2520	NP_001246958.1	572	like-AP180, isoform E
3R	NT_033777.3	7201094	7203287	+	40864	CG14609	Dmel_CG14609	NP_001287205.1	597	uncharacterized protein Dmel_CG14609, isoform B
3R	NT_033777.3	7201094	7203287	+	40864	CG14609	Dmel_CG14609	NP_649704.3	597	uncharacterized protein Dmel_CG14609, isoform A
3R	NT_033777.3	7207692	7208310	-	40865	CG1288	Dmel_CG1288	NP_649705.2	187	CG1288, isoform A
3R	NT_033777.3	7207692	7208310	-	40865	CG1288	Dmel_CG1288	NP_001262341.1	187	CG1288, isoform B
3R	NT_033777.3	7214736	7217018	-	40866	CG14606	Dmel_CG14606	NP_001334690.1	466	uncharacterized protein Dmel_CG14606, isoform C
3R	NT_033777.3	7214736	7216872	-	40866	CG14606	Dmel_CG14606	NP_649706.1	438	uncharacterized protein Dmel_CG14606, isoform A
3R	NT_033777.3	7217729	7219467	-	40867	CG14605	Dmel_CG14605	NP_731145.1	432	uncharacterized protein Dmel_CG14605, isoform B
3R	NT_033777.3	7217729	7219467	-	40867	CG14605	Dmel_CG14605	NP_649707.3	432	uncharacterized protein Dmel_CG14605, isoform D
3R	NT_033777.3	7218280	7219467	-	40867	CG14605	Dmel_CG14605	NP_731146.3	248	uncharacterized protein Dmel_CG14605, isoform E
3R	NT_033777.3	7225231	7240687	+	40868	thw	Dmel_CG14608	NP_001097699.2	1137	thawb
3R	NT_033777.3	7241861	7243841	+	40869	CG14607	Dmel_CG14607	NP_649709.2	401	uncharacterized protein Dmel_CG14607
3R	NT_033777.3	7244249	7246883	-	40870	CG1234	Dmel_CG1234	NP_649710.1	822	CG1234
3R	NT_033777.3	7247250	7248119	+	40871	CG10053	Dmel_CG10053	NP_649711.1	266	uncharacterized protein Dmel_CG10053, isoform A
3R	NT_033777.3	7247250	7248119	+	40871	CG10053	Dmel_CG10053	NP_001287206.1	266	uncharacterized protein Dmel_CG10053, isoform B
3R	NT_033777.3	7248285	7249420	-	40872	CG1227	Dmel_CG1227	NP_649712.1	320	CG1227, isoform A
3R	NT_033777.3	7248285	7249420	-	40872	CG1227	Dmel_CG1227	NP_001287207.1	320	CG1227, isoform B
3R	NT_033777.3	7249878	7250695	+	40873	CG10050	Dmel_CG10050	NP_649713.1	251	uncharacterized protein Dmel_CG10050
3R	NT_033777.3	7250841	7251536	-	40874	Obp84a	Dmel_CG1176	NP_476990.1	175	Odorant-binding protein 84a, isoform A
3R	NT_033777.3	7250841	7251957	-	40874	Obp84a	Dmel_CG1176	NP_001097700.2	221	Odorant-binding protein 84a, isoform C
3R	NT_033777.3	7252775	7257484	-	40875	Gld	Dmel_CG1152	NP_477503.1	612	glucose dehydrogenase
3R	NT_033777.3	7266853	7269312	+	40876	Syt4	Dmel_CG10047	NP_477464.1	474	synaptotagmin 4
3R	NT_033777.3	7274024	7308327	-	40879	rn	Dmel_CG42277	NP_001262343.1	952	rotund, isoform G
3R	NT_033777.3	7274042	7308327	-	40879	rn	Dmel_CG42277	NP_649715.2	946	rotund, isoform E
3R	NT_033777.3	7274042	7277418	-	40879	rn	Dmel_CG42277	NP_996178.1	692	rotund, isoform C
3R	NT_033777.3	7274042	7302172	-	40879	rn	Dmel_CG42277	NP_001138021.1	927	rotund, isoform F
3R	NT_033777.3	7286105	7287515	+	117503	RacGAP84C	Dmel_CG2595	NP_476704.1	384	Rac GTPase activating protein at 84C, isoform A
3R	NT_033777.3	7286105	7287392	+	117503	RacGAP84C	Dmel_CG2595	NP_476703.1	383	Rac GTPase activating protein at 84C, isoform B
3R	NT_033777.3	7304592	7304954	+	8674002	CG42544	Dmel_CG42544	NP_001163539.1	120	uncharacterized protein Dmel_CG42544
3R	NT_033777.3	7315833	7317169	-	40883	CG10029	Dmel_CG10029	NP_649716.1	410	uncharacterized protein Dmel_CG10029
3R	NT_033777.3	7325852	7326175	+	19834757	CG44335	Dmel_CG44335	NP_001287209.1	107	uncharacterized protein Dmel_CG44335
3R	NT_033777.3	7345213	7346278	+	326145	CG31496	Dmel_CG31496	NP_731155.1	269	uncharacterized protein Dmel_CG31496
3R	NT_033777.3	7346833	7347738	+	40884	nxf4	Dmel_CG31501	NP_731156.1	301	nuclear export factor 4
3R	NT_033777.3	7349029	7349517	-	12798047	CG43290	Dmel_CG43290	NP_001246961.1	122	uncharacterized protein Dmel_CG43290
3R	NT_033777.3	7361429	7362031	-	40885	CG17944	Dmel_CG17944	NP_731158.1	200	uncharacterized protein Dmel_CG17944
3R	NT_033777.3	7363398	7363616	-	40886	Mst84Dd	Dmel_CG17935	NP_524253.1	72	Male-specific RNA 84Dd
3R	NT_033777.3	7364362	7364529	-	40887	Mst84Dc	Dmel_CG17945	NP_524254.1	55	Male-specific RNA 84Dc, isoform A
3R	NT_033777.3	7364362	7364529	-	40887	Mst84Dc	Dmel_CG17945	NP_001097701.1	55	Male-specific RNA 84Dc, isoform B
3R	NT_033777.3	7365281	7365505	-	40888	Mst84Db	Dmel_CG17934	NP_524255.2	74	Male-specific RNA 84Db
3R	NT_033777.3	7365933	7366179	+	40889	Mst84Da	Dmel_CG17946	NP_524256.1	63	Male-specific RNA 84Da
3R	NT_033777.3	7366303	7369305	-	40890	MstProx	Dmel_CG1149	NP_649719.2	965	MstProx
3R	NT_033777.3	7391482	7392151	+	10178825	CG42650	Dmel_CG42650	NP_001189191.1	188	uncharacterized protein Dmel_CG42650
3R	NT_033777.3	7406869	7409384	+	40891	Ir84a	Dmel_CG10101	NP_649720.2	644	ionotropic receptor 84a
3R	NT_033777.3	7420855	7423012	+	40892	wa-cup	Dmel_CG10113	NP_649721.2	580	walker cup
3R	NT_033777.3	7439847	7441523	+	40893	CG14598	Dmel_CG14598	NP_649722.1	229	uncharacterized protein Dmel_CG14598
3R	NT_033777.3	7472479	7473737	-	40894	CG1142	Dmel_CG1142	NP_788592.1	281	CG1142
3R	NT_033777.3	7486830	7488690	-	40896	alpha-Est10	Dmel_CG1131	NP_001246963.1	550	alpha-Esterase-10, isoform D
3R	NT_033777.3	7486830	7491393	-	40896	alpha-Est10	Dmel_CG1131	NP_524257.3	567	alpha-Esterase-10, isoform B
3R	NT_033777.3	7486830	7493823	-	40896	alpha-Est10	Dmel_CG1131	NP_001246962.1	581	alpha-Esterase-10, isoform C
3R	NT_033777.3	7493022	7493236	-	10178806	CG42656	Dmel_CG42656	NP_001189192.1	52	uncharacterized protein Dmel_CG42656
3R	NT_033777.3	7495071	7504557	-	40897	alpha-Est9	Dmel_CG1128	NP_524258.2	569	alpha-Esterase-9, isoform C
3R	NT_033777.3	7495071	7504557	-	40897	alpha-Est9	Dmel_CG1128	NP_731165.2	587	alpha-Esterase-9, isoform D
3R	NT_033777.3	7501146	7502243	-	40898	CG1287	Dmel_CG1287	NP_649725.2	365	CG1287
3R	NT_033777.3	7509802	7515208	-	40899	alpha-Est8	Dmel_CG1121	NP_524259.2	574	alpha-Esterase-8
3R	NT_033777.3	7518897	7519358	-	40900	Ubc84D	Dmel_CG12799	NP_524260.1	153	ubiquitin conjugating enzyme 84D
3R	NT_033777.3	7519751	7523643	-	40901	alpha-Est7	Dmel_CG1112	NP_524261.1	572	alpha-Esterase-7
3R	NT_033777.3	7524636	7528717	-	40902	alpha-Est6	Dmel_CG1108	NP_524262.1	568	alpha-Esterase-6
3R	NT_033777.3	7528955	7529794	-	40903	Rtnl2	Dmel_CG1279	NP_524263.2	255	Rtnl2, isoform B
3R	NT_033777.3	7528955	7529794	-	40903	Rtnl2	Dmel_CG1279	NP_001246964.1	255	Rtnl2, isoform C
3R	NT_033777.3	7531259	7532611	+	40904	alphaTub84D	Dmel_CG2512	NP_524264.1	450	alpha-Tubulin at 84D
3R	NT_033777.3	7534264	7536300	-	40905	alpha-Est5	Dmel_CG1089	NP_524265.3	542	alpha-Esterase-5, isoform A
3R	NT_033777.3	7534264	7536300	-	40905	alpha-Est5	Dmel_CG1089	NP_001246965.1	543	alpha-Esterase-5, isoform B
3R	NT_033777.3	7536752	7538557	-	40906	alpha-Est4	Dmel_CG1082	NP_524266.1	541	alpha-Esterase-4
3R	NT_033777.3	7539043	7541199	-	40907	alpha-Est3	Dmel_CG1257	NP_001287210.1	543	alpha-Esterase-3, isoform D
3R	NT_033777.3	7539043	7541199	-	40907	alpha-Est3	Dmel_CG1257	NP_524267.2	543	alpha-Esterase-3, isoform A
3R	NT_033777.3	7539043	7541199	-	40907	alpha-Est3	Dmel_CG1257	NP_001163540.1	543	alpha-Esterase-3, isoform B
3R	NT_033777.3	7540841	7541199	-	40907	alpha-Est3	Dmel_CG1257	NP_001262344.1	99	alpha-Esterase-3, isoform C
3R	NT_033777.3	7542850	7545078	+	40908	alpha-Est2	Dmel_CG2505	NP_524268.3	566	alpha-Esterase-2, isoform A
3R	NT_033777.3	7542850	7545078	+	40908	alpha-Est2	Dmel_CG2505	NP_001262345.1	566	alpha-Esterase-2, isoform B
3R	NT_033777.3	7545972	7548938	-	40909	alpha-Est1	Dmel_CG1031	NP_524269.3	565	alpha-Esterase-1
3R	NT_033777.3	7552099	7552275	+	19835450	CG45545	Dmel_CG45545	NP_001287211.1	58	uncharacterized protein Dmel_CG45545
3R	NT_033777.3	7572244	7603747	-	40912	Nlg3	Dmel_CG34127	NP_731170.2	1159	neuroligin 3, isoform C
3R	NT_033777.3	7572244	7603747	-	40912	Nlg3	Dmel_CG34127	NP_001036685.2	1159	neuroligin 3, isoform B
3R	NT_033777.3	7662597	7693700	+	40913	Nlg1	Dmel_CG31146	NP_001246966.1	1354	neuroligin 1, isoform E
3R	NT_033777.3	7662597	7693700	+	40913	Nlg1	Dmel_CG31146	NP_731172.2	1354	neuroligin 1, isoform D
3R	NT_033777.3	7722547	7724375	+	40915	CG2616	Dmel_CG2616	NP_001287212.1	449	CG2616, isoform B
3R	NT_033777.3	7722547	7724375	+	40915	CG2616	Dmel_CG2616	NP_649731.1	449	CG2616, isoform A
3R	NT_033777.3	7739033	7739539	-	12798054	CG43254	Dmel_CG43254	NP_001262346.1	132	uncharacterized protein Dmel_CG43254, isoform B
3R	NT_033777.3	7739033	7739539	-	12798054	CG43254	Dmel_CG43254	NP_001246967.1	128	uncharacterized protein Dmel_CG43254, isoform A
3R	NT_033777.3	7748020	7749986	-	40916	pyd3	Dmel_CG3027	NP_649732.1	386	pyd3
3R	NT_033777.3	7758270	7759614	+	40917	CG10919	Dmel_CG10919	NP_649733.2	187	uncharacterized protein Dmel_CG10919
3R	NT_033777.3	7761187	7763339	+	40918	Sp7	Dmel_CG3066	NP_649734.2	391	serine protease 7, isoform A
3R	NT_033777.3	7761187	7763339	+	40918	Sp7	Dmel_CG3066	NP_731175.2	391	serine protease 7, isoform F
3R	NT_033777.3	7761187	7763339	+	40918	Sp7	Dmel_CG3066	NP_731174.1	391	serine protease 7, isoform E
3R	NT_033777.3	7771007	7771700	-	40919	CG11286	Dmel_CG11286	NP_649735.1	191	uncharacterized protein Dmel_CG11286, isoform A
3R	NT_033777.3	7771392	7771700	-	40919	CG11286	Dmel_CG11286	NP_001246968.1	102	uncharacterized protein Dmel_CG11286, isoform B
3R	NT_033777.3	7780990	7783401	-	59143	CG18747	Dmel_CG18747	NP_652650.2	418	uncharacterized protein Dmel_CG18747
3R	NT_033777.3	7783942	7785953	-	59141	CG18745	Dmel_CG18745	NP_652648.1	433	uncharacterized protein Dmel_CG18745
3R	NT_033777.3	7786369	7787843	-	59144	CG18748	Dmel_CG18748	NP_001097702.1	359	uncharacterized protein Dmel_CG18748, isoform B
3R	NT_033777.3	7786369	7787843	-	59144	CG18748	Dmel_CG18748	NP_001097703.1	409	uncharacterized protein Dmel_CG18748, isoform C
3R	NT_033777.3	7788372	7790107	-	59142	CG18746	Dmel_CG18746	NP_652649.1	438	uncharacterized protein Dmel_CG18746
3R	NT_033777.3	7790727	7793123	+	40920	CG10086	Dmel_CG10086	NP_649736.3	469	uncharacterized protein Dmel_CG10086
3R	NT_033777.3	7794209	7796519	+	40921	CG2641	Dmel_CG2641	NP_649737.1	429	CG2641
3R	NT_033777.3	7797157	7798747	-	59140	CG18744	Dmel_CG18744	NP_652647.2	410	uncharacterized protein Dmel_CG18744
3R	NT_033777.3	7799606	7802029	-	40922	CG3014	Dmel_CG3014	NP_001138022.2	488	CG3014, isoform C
3R	NT_033777.3	7799606	7802029	-	40922	CG3014	Dmel_CG3014	NP_649738.1	488	CG3014, isoform A
3R	NT_033777.3	7803030	7804276	-	40923	CG18268	Dmel_CG18268	NP_649739.1	358	uncharacterized protein Dmel_CG18268
3R	NT_033777.3	7805505	7809153	-	40924	CG2993	Dmel_CG2993	NP_001262347.1	524	CG2993, isoform B
3R	NT_033777.3	7805505	7809153	-	40924	CG2993	Dmel_CG2993	NP_001262348.1	545	CG2993, isoform C
3R	NT_033777.3	7806559	7809153	-	40924	CG2993	Dmel_CG2993	NP_649740.1	511	CG2993, isoform A
3R	NT_033777.3	7810668	7811536	+	40925	sgll	Dmel_CG31472	NP_731186.2	246	sugarlethal, isoform A
3R	NT_033777.3	7810756	7811536	+	40925	sgll	Dmel_CG31472	NP_731187.1	237	sugarlethal, isoform B
3R	NT_033777.3	7811896	7812884	+	318753	CG31473	Dmel_CG31473	NP_731188.1	257	uncharacterized protein Dmel_CG31473
3R	NT_033777.3	7815219	7853246	+	5740362	CG34384	Dmel_CG34384	NP_001287213.1	1894	uncharacterized protein Dmel_CG34384, isoform F
3R	NT_033777.3	7815219	7853246	+	5740362	CG34384	Dmel_CG34384	NP_001246969.1	1918	uncharacterized protein Dmel_CG34384, isoform C
3R	NT_033777.3	7815219	7853246	+	5740362	CG34384	Dmel_CG34384	NP_001246971.1	1936	uncharacterized protein Dmel_CG34384, isoform E
3R	NT_033777.3	7815219	7853246	+	5740362	CG34384	Dmel_CG34384	NP_001246970.1	1871	uncharacterized protein Dmel_CG34384, isoform D
3R	NT_033777.3	7815219	7853246	+	5740362	CG34384	Dmel_CG34384	NP_001097704.1	1895	uncharacterized protein Dmel_CG34384, isoform A
3R	NT_033777.3	7843786	7853246	+	5740362	CG34384	Dmel_CG34384	NP_731190.3	1733	uncharacterized protein Dmel_CG34384, isoform B
3R	NT_033777.3	7858174	7885910	-	40928	CG17816	Dmel_CG17816	NP_001097705.1	855	uncharacterized protein Dmel_CG17816, isoform E
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_731192.2	685	uncharacterized protein Dmel_CG17816, isoform I
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_731191.2	772	uncharacterized protein Dmel_CG17816, isoform H
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_996180.2	772	uncharacterized protein Dmel_CG17816, isoform D
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_001262350.1	770	uncharacterized protein Dmel_CG17816, isoform K
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_649744.3	639	uncharacterized protein Dmel_CG17816, isoform J
3R	NT_033777.3	7858912	7885910	-	40928	CG17816	Dmel_CG17816	NP_001097706.1	882	uncharacterized protein Dmel_CG17816, isoform G
3R	NT_033777.3	7868013	7885910	-	40928	CG17816	Dmel_CG17816	NP_001163541.1	256	uncharacterized protein Dmel_CG17816, isoform F
3R	NT_033777.3	7887107	7889249	+	40929	ArgRS-m	Dmel_CG10092	NP_001262351.1	594	Arginyl-tRNA synthetase, mitochondrial, isoform B
3R	NT_033777.3	7887107	7889249	+	40929	ArgRS-m	Dmel_CG10092	NP_649745.3	594	Arginyl-tRNA synthetase, mitochondrial, isoform A
3R	NT_033777.3	7889347	7902632	-	40932	mRpS9	Dmel_CG2957	NP_524270.2	395	mitochondrial ribosomal protein S9
3R	NT_033777.3	7894512	7900754	+	40931	wtrw	Dmel_CG31284	NP_996181.1	986	water witch, isoform C
3R	NT_033777.3	7894512	7900754	+	40931	wtrw	Dmel_CG31284	NP_731193.1	986	water witch, isoform A
3R	NT_033777.3	7894512	7900754	+	40931	wtrw	Dmel_CG31284	NP_731194.1	986	water witch, isoform B
3R	NT_033777.3	7896276	7900754	+	40931	wtrw	Dmel_CG31284	NP_001287214.1	969	water witch, isoform D
3R	NT_033777.3	7903433	7907222	-	40933	EMC1	Dmel_CG2943	NP_649747.1	915	ER membrane protein complex 1, isoform A
3R	NT_033777.3	7903433	7907222	-	40933	EMC1	Dmel_CG2943	NP_001287217.1	908	ER membrane protein complex 1, isoform D
3R	NT_033777.3	7903433	7907222	-	40933	EMC1	Dmel_CG2943	NP_001287216.1	908	ER membrane protein complex 1, isoform C
3R	NT_033777.3	7903433	7907222	-	40933	EMC1	Dmel_CG2943	NP_001287215.1	915	ER membrane protein complex 1, isoform B
3R	NT_033777.3	7907625	7909128	+	40934	Taf7	Dmel_CG2670	NP_649748.1	479	TBP-associated factor 7, isoform A
3R	NT_033777.3	7907721	7909128	+	40934	Taf7	Dmel_CG2670	NP_001138023.1	447	TBP-associated factor 7, isoform B
3R	NT_033777.3	7909969	7911609	-	40935	Prat	Dmel_CG2867	NP_001246972.1	546	phosphoribosylamidotransferase, isoform B
3R	NT_033777.3	7909969	7911609	-	40935	Prat	Dmel_CG2867	NP_524271.2	546	phosphoribosylamidotransferase, isoform A
3R	NT_033777.3	7912488	7913013	-	40936	CG2846	Dmel_CG2846	NP_649749.2	153	CG2846, isoform A
3R	NT_033777.3	7912488	7913013	-	40936	CG2846	Dmel_CG2846	NP_001287218.1	153	CG2846, isoform B
3R	NT_033777.3	7914084	7916180	+	40937	CG2678	Dmel_CG2678	NP_649750.1	434	CG2678, isoform A
3R	NT_033777.3	7914084	7915278	+	40937	CG2678	Dmel_CG2678	NP_001246973.1	346	CG2678, isoform B
3R	NT_033777.3	7916928	7920012	-	40938	CG10445	Dmel_CG10445	NP_001287219.1	944	uncharacterized protein Dmel_CG10445, isoform E
3R	NT_033777.3	7916928	7920012	-	40938	CG10445	Dmel_CG10445	NP_649751.2	945	uncharacterized protein Dmel_CG10445, isoform C
3R	NT_033777.3	7916928	7920012	-	40938	CG10445	Dmel_CG10445	NP_001246974.1	945	uncharacterized protein Dmel_CG10445, isoform D
3R	NT_033777.3	7920529	7924232	+	45894	lds	Dmel_CG2684	NP_524850.2	1061	lodestar
3R	NT_033777.3	7925351	7960805	-	40940	dsx	Dmel_CG11094	NP_001262353.1	572	doublesex, isoform E
3R	NT_033777.3	7930230	7960805	-	40940	dsx	Dmel_CG11094	NP_731197.1	549	doublesex, isoform A
3R	NT_033777.3	7930230	7960805	-	40940	dsx	Dmel_CG11094	NP_001262352.1	549	doublesex, isoform D
3R	NT_033777.3	7935562	7960805	-	40940	dsx	Dmel_CG11094	NP_731198.1	427	doublesex, isoform B
3R	NT_033777.3	7935562	7960805	-	40940	dsx	Dmel_CG11094	NP_524272.4	427	doublesex, isoform C
3R	NT_033777.3	7935562	7960805	-	40940	dsx	Dmel_CG11094	NP_001287220.1	427	doublesex, isoform F
3R	NT_033777.3	7974619	7977063	-	40941	CD98hc	Dmel_CG2791	NP_001262354.1	565	CD98 heavy chain, isoform F
3R	NT_033777.3	7974619	7977063	-	40941	CD98hc	Dmel_CG2791	NP_649752.2	565	CD98 heavy chain, isoform A
3R	NT_033777.3	7974619	7977063	-	40941	CD98hc	Dmel_CG2791	NP_001262356.1	567	CD98 heavy chain, isoform D
3R	NT_033777.3	7974619	7977063	-	40941	CD98hc	Dmel_CG2791	NP_001262355.1	565	CD98 heavy chain, isoform B
3R	NT_033777.3	7978975	7979488	+	40942	Os-C	Dmel_CG3250	NP_649753.3	135	Os-C, isoform C
3R	NT_033777.3	7978975	7979488	+	40942	Os-C	Dmel_CG3250	NP_001262357.1	131	Os-C, isoform D
3R	NT_033777.3	7978975	7979488	+	40942	Os-C	Dmel_CG3250	NP_001163543.1	153	Os-C, isoform B
3R	NT_033777.3	7979761	7980293	-	8674093	Sfp84E	Dmel_CG42484	NP_001163544.1	160	seminal fluid protein 84E
3R	NT_033777.3	7982371	7995422	-	40943	CG2781	Dmel_CG2781	NP_649754.1	329	CG2781
3R	NT_033777.3	8000045	8000852	+	40944	CG14463	Dmel_CG14463	NP_001262358.1	221	uncharacterized protein Dmel_CG14463, isoform B
3R	NT_033777.3	8000045	8000852	+	40944	CG14463	Dmel_CG14463	NP_649755.1	221	uncharacterized protein Dmel_CG14463, isoform A
3R	NT_033777.3	8000816	8001285	-	8674119	Kmn2	Dmel_CG42550	NP_001163546.2	93	kinetochore Mis12-Ndc80 network component 2, isoform D
3R	NT_033777.3	8000816	8001285	-	8674119	Kmn2	Dmel_CG42550	NP_001163545.1	95	kinetochore Mis12-Ndc80 network component 2, isoform A
3R	NT_033777.3	8001922	8005254	+	40945	CG2698	Dmel_CG2698	NP_001138024.2	806	CG2698, isoform I
3R	NT_033777.3	8001922	8005284	+	40945	CG2698	Dmel_CG2698	NP_649756.2	817	CG2698, isoform A
3R	NT_033777.3	8001922	8005284	+	40945	CG2698	Dmel_CG2698	NP_001262360.1	813	CG2698, isoform G
3R	NT_033777.3	8001922	8003876	+	40945	CG2698	Dmel_CG2698	NP_001246975.1	595	CG2698, isoform C
3R	NT_033777.3	8001922	8005916	+	40945	CG2698	Dmel_CG2698	NP_001262361.1	865	CG2698, isoform H
3R	NT_033777.3	8001922	8005916	+	40945	CG2698	Dmel_CG2698	NP_001246976.1	869	CG2698, isoform D
3R	NT_033777.3	8001922	8005284	+	40945	CG2698	Dmel_CG2698	NP_001262359.1	821	CG2698, isoform E
3R	NT_033777.3	8006100	8007967	-	40946	CG2767	Dmel_CG2767	NP_649757.1	329	CG2767
3R	NT_033777.3	8008383	8009051	-	49997	CG11052	Dmel_CG11052	NP_001246978.1	149	uncharacterized protein Dmel_CG11052, isoform C
3R	NT_033777.3	8008383	8009051	-	49997	CG11052	Dmel_CG11052	NP_001246977.1	149	uncharacterized protein Dmel_CG11052, isoform B
3R	NT_033777.3	8008383	8009051	-	49997	CG11052	Dmel_CG11052	NP_652181.1	149	uncharacterized protein Dmel_CG11052, isoform A
3R	NT_033777.3	8008383	8009051	-	49997	CG11052	Dmel_CG11052	NP_001262362.1	149	uncharacterized protein Dmel_CG11052, isoform D
3R	NT_033777.3	8009488	8010866	+	40947	CG3223	Dmel_CG3223	NP_649758.1	415	CG3223
3R	NT_033777.3	8011109	8013069	-	40948	CG10435	Dmel_CG10435	NP_649759.1	495	uncharacterized protein Dmel_CG10435
3R	NT_033777.3	8013838	8016174	+	40949	Pbp95	Dmel_CG2702	NP_649760.1	721	PSEA-binding protein 95kD
3R	NT_033777.3	8016680	8026841	-	40950	CG2747	Dmel_CG2747	NP_001163547.1	2154	CG2747, isoform C
3R	NT_033777.3	8016680	8026841	-	40950	CG2747	Dmel_CG2747	NP_001262364.1	2172	CG2747, isoform F
3R	NT_033777.3	8016680	8026841	-	40950	CG2747	Dmel_CG2747	NP_649761.2	2165	CG2747, isoform A
3R	NT_033777.3	8016680	8026841	-	40950	CG2747	Dmel_CG2747	NP_001262363.1	2161	CG2747, isoform E
3R	NT_033777.3	8016680	8024990	-	40950	CG2747	Dmel_CG2747	NP_001163548.1	2106	CG2747, isoform D
3R	NT_033777.3	8016680	8024990	-	40950	CG2747	Dmel_CG2747	NP_731206.1	2117	CG2747, isoform B
3R	NT_033777.3	8028504	8029481	-	48239	ImpE3	Dmel_CG2723	NP_524908.1	325	Ecdysone-inducible gene E3
3R	NT_033777.3	8030944	8031969	+	40952	CG10903	Dmel_CG10903	NP_649762.1	276	uncharacterized protein Dmel_CG10903, isoform A
3R	NT_033777.3	8030944	8031969	+	40952	CG10903	Dmel_CG10903	NP_001262365.1	276	uncharacterized protein Dmel_CG10903, isoform B
3R	NT_033777.3	8032212	8032907	-	40953	CG11035	Dmel_CG11035	NP_649763.1	231	uncharacterized protein Dmel_CG11035, isoform A
3R	NT_033777.3	8032212	8032907	-	40953	CG11035	Dmel_CG11035	NP_001303469.1	231	uncharacterized protein Dmel_CG11035, isoform B
3R	NT_033777.3	8033602	8036504	+	44910	unc-45	Dmel_CG2708	NP_524796.1	947	uncoordinated 45, isoform A
3R	NT_033777.3	8033602	8036504	+	44910	unc-45	Dmel_CG2708	NP_001303425.1	947	uncoordinated 45, isoform B
3R	NT_033777.3	8041248	8041608	+	12798056	CG43060	Dmel_CG43060	NP_001246979.1	95	uncharacterized protein Dmel_CG43060, isoform A
3R	NT_033777.3	8041248	8041608	+	12798056	CG43060	Dmel_CG43060	NP_001246980.1	95	uncharacterized protein Dmel_CG43060, isoform B
3R	NT_033777.3	8049176	8049411	+	12798057	CG43618	Dmel_CG43618	NP_001246981.1	56	uncharacterized protein Dmel_CG43618
3R	NT_033777.3	8049702	8049921	+	12798058	CG43061	Dmel_CG43061	NP_001246982.1	53	uncharacterized protein Dmel_CG43061
3R	NT_033777.3	8082393	8085732	+	40955	mAChR-B	Dmel_CG7918	NP_001287221.1	755	muscarinic acetylcholine Receptor, B-type, isoform B
3R	NT_033777.3	8082393	8085732	+	40955	mAChR-B	Dmel_CG7918	NP_649764.1	1019	muscarinic acetylcholine Receptor, B-type, isoform A
3R	NT_033777.3	8087542	8089433	+	40956	CG7910	Dmel_CG7910	NP_001287222.1	530	CG7910, isoform B
3R	NT_033777.3	8087542	8089433	+	40956	CG7910	Dmel_CG7910	NP_649765.1	530	CG7910, isoform A
3R	NT_033777.3	8094149	8101808	+	40957	CG7900	Dmel_CG7900	NP_001097707.1	536	CG7900
3R	NT_033777.3	8105861	8121335	+	40958	puc	Dmel_CG7850	NP_524273.1	476	puckered, isoform A
3R	NT_033777.3	8108318	8121335	+	40958	puc	Dmel_CG7850	NP_001287223.1	369	puckered, isoform B
3R	NT_033777.3	8122853	8125138	+	40959	CG7878	Dmel_CG7878	NP_649767.1	703	CG7878
3R	NT_033777.3	8125312	8126230	-	40960	CG9667	Dmel_CG9667	NP_001287224.1	264	CG9667, isoform B
3R	NT_033777.3	8125312	8126315	-	40960	CG9667	Dmel_CG9667	NP_649768.2	272	CG9667, isoform A
3R	NT_033777.3	8126720	8128610	+	40961	Gie	Dmel_CG7891	NP_649769.1	186	GTPase indispensable for equal segregation of chromosomes, isoform A
3R	NT_033777.3	8126720	8128610	+	40961	Gie	Dmel_CG7891	NP_001287226.1	186	GTPase indispensable for equal segregation of chromosomes, isoform C
3R	NT_033777.3	8126720	8128610	+	40961	Gie	Dmel_CG7891	NP_001287225.1	186	GTPase indispensable for equal segregation of chromosomes, isoform B
3R	NT_033777.3	8148899	8179676	-	40962	grn	Dmel_CG9656	NP_001262366.1	712	grain, isoform C
3R	NT_033777.3	8148938	8179676	-	40962	grn	Dmel_CG9656	NP_001138026.1	699	grain, isoform B
3R	NT_033777.3	8148938	8179676	-	40962	grn	Dmel_CG9656	NP_731211.1	486	grain, isoform A
3R	NT_033777.3	8204226	8204822	-	3771856	CheA84a	Dmel_CG33779	NP_001027150.1	180	chemosensory protein A 84a
3R	NT_033777.3	8218061	8219662	+	40963	CG7800	Dmel_CG7800	NP_649770.1	533	CG7800
3R	NT_033777.3	8220198	8221937	+	40964	CG18249	Dmel_CG18249	NP_001163549.1	559	uncharacterized protein Dmel_CG18249, isoform B
3R	NT_033777.3	8220198	8221865	+	40964	CG18249	Dmel_CG18249	NP_649771.1	555	uncharacterized protein Dmel_CG18249, isoform C
3R	NT_033777.3	8234266	8236543	+	40965	DNApol-iota	Dmel_CG7602	NP_649772.1	737	DNApol-iota, isoform A
3R	NT_033777.3	8234266	8236543	+	40965	DNApol-iota	Dmel_CG7602	NP_001287227.1	737	DNApol-iota, isoform C
3R	NT_033777.3	8234266	8236543	+	40965	DNApol-iota	Dmel_CG7602	NP_731214.1	737	DNApol-iota, isoform B
3R	NT_033777.3	8237438	8240423	-	40966	Ada2b	Dmel_CG9638	NP_001027151.1	555	transcriptional adaptor 2b, isoform B
3R	NT_033777.3	8237919	8240423	-	40966	Ada2b	Dmel_CG9638	NP_649773.1	418	transcriptional adaptor 2b, isoform A
3R	NT_033777.3	8237919	8240423	-	40966	Ada2b	Dmel_CG9638	NP_001262367.1	418	transcriptional adaptor 2b, isoform C
3R	NT_033777.3	8242390	8243508	-	40967	CG9636	Dmel_CG9636	NP_731216.2	295	CG9636, isoform D
3R	NT_033777.3	8242390	8243535	-	40967	CG9636	Dmel_CG9636	NP_649774.1	304	CG9636, isoform C
3R	NT_033777.3	8244213	8245649	+	3771984	CG18749	Dmel_CG18749	NP_001027152.1	478	uncharacterized protein Dmel_CG33722, isoform C
3R	NT_033777.3	8244213	8245649	+	3771984	CG18749	Dmel_CG18749	NP_001287229.1	478	uncharacterized protein Dmel_CG33722, isoform D
3R	NT_033777.3	8244213	8245649	+	3771984	CG18749	Dmel_CG18749	NP_001287230.1	478	uncharacterized protein Dmel_CG33722, isoform E
3R	NT_033777.3	8244213	8245649	+	3771984	CG18749	Dmel_CG18749	NP_001027153.1	478	uncharacterized protein Dmel_CG33722, isoform B
3R	NT_033777.3	8245980	8247797	+	3771984	CG18749	Dmel_CG18749	NP_001027154.1	491	uncharacterized protein Dmel_CG18749, isoform B
3R	NT_033777.3	8245980	8247797	+	3771984	CG18749	Dmel_CG18749	NP_001287228.1	491	uncharacterized protein Dmel_CG18749, isoform C
3R	NT_033777.3	8248449	8250266	+	50001	CG15864	Dmel_CG15864	NP_652183.2	490	uncharacterized protein Dmel_CG15864
3R	NT_033777.3	8252179	8260187	+	40970	mtg	Dmel_CG7549	NP_649775.2	515	mind the gap, isoform F
3R	NT_033777.3	8252179	8260187	+	40970	mtg	Dmel_CG7549	NP_731221.2	556	mind the gap, isoform E
3R	NT_033777.3	8258793	8260187	+	40970	mtg	Dmel_CG7549	NP_001036686.3	387	mind the gap, isoform H
3R	NT_033777.3	8258793	8260187	+	40970	mtg	Dmel_CG7549	NP_001287231.1	387	mind the gap, isoform G
3R	NT_033777.3	8262362	8264370	-	40972	RpA-70	Dmel_CG9633	NP_524274.1	603	replication protein A 70
3R	NT_033777.3	8265101	8267821	+	40973	Mcm2	Dmel_CG7538	NP_477121.1	887	minichromosome maintenance 2
3R	NT_033777.3	8268001	8269842	-	40974	CG9630	Dmel_CG9630	NP_649777.1	613	CG9630
3R	NT_033777.3	8278126	8279064	+	40975	ato	Dmel_CG7508	NP_731223.1	312	atonal
3R	NT_033777.3	8288039	8288518	+	40976	CG11671	Dmel_CG11671	NP_649778.1	140	uncharacterized protein Dmel_CG11671
3R	NT_033777.3	8289764	8290548	-	40977	CG11672	Dmel_CG11672	NP_649779.1	240	uncharacterized protein Dmel_CG11672, isoform A
3R	NT_033777.3	8289764	8290548	-	40977	CG11672	Dmel_CG11672	NP_001262368.1	240	uncharacterized protein Dmel_CG11672, isoform B
3R	NT_033777.3	8291252	8292004	+	318749	CG31464	Dmel_CG31464	NP_731226.2	232	uncharacterized protein Dmel_CG31464
3R	NT_033777.3	8292366	8293517	+	40978	CG31463	Dmel_CG31463	NP_731227.1	383	uncharacterized protein Dmel_CG31463
3R	NT_033777.3	8294209	8299898	-	40979	CG9626	Dmel_CG9626	NP_649781.1	1667	CG9626, isoform A
3R	NT_033777.3	8294209	8299898	-	40979	CG9626	Dmel_CG9626	NP_001262369.1	1644	CG9626, isoform D
3R	NT_033777.3	8294209	8299898	-	40979	CG9626	Dmel_CG9626	NP_001246983.1	1667	CG9626, isoform B
3R	NT_033777.3	8294209	8299898	-	40979	CG9626	Dmel_CG9626	NP_001246984.1	1667	CG9626, isoform C
3R	NT_033777.3	8301512	8302687	+	40980	mRpL1	Dmel_CG7494	NP_524275.1	354	mitochondrial ribosomal protein L1
3R	NT_033777.3	8302799	8303925	-	40981	nac	Dmel_CG9620	NP_649782.1	337	neuronally altered carbohydrate
3R	NT_033777.3	8304586	8305122	-	40982	Sgt1	Dmel_CG9617	NP_649783.2	178	suppressor-of-G2-allele-of-skp1
3R	NT_033777.3	8307503	8308575	-	40983	tex	Dmel_CG9615	NP_649784.1	320	tex
3R	NT_033777.3	8308978	8309934	-	40984	CG11693	Dmel_CG11693	NP_649785.1	318	uncharacterized protein Dmel_CG11693, isoform A
3R	NT_033777.3	8308978	8310005	-	40984	CG11693	Dmel_CG11693	NP_001246985.1	323	uncharacterized protein Dmel_CG11693, isoform B
3R	NT_033777.3	8311283	8312068	-	40985	CG11694	Dmel_CG11694	NP_649786.1	261	uncharacterized protein Dmel_CG11694
3R	NT_033777.3	8312244	8313032	+	40986	CG11698	Dmel_CG11698	NP_649787.2	262	uncharacterized protein Dmel_CG11698
3R	NT_033777.3	8313338	8314713	+	40987	eIF4AIII	Dmel_CG7483	NP_649788.2	399	eIF4AIII
3R	NT_033777.3	8315154	8316390	-	40988	Coq2	Dmel_CG9613	NP_649789.1	392	coenzyme Q biosynthesis protein 2
3R	NT_033777.3	8317737	8318902	+	40989	Ctr1B	Dmel_CG7459	NP_649790.1	174	copper transporter 1B
3R	NT_033777.3	8319810	8333124	-	40990	Poxm	Dmel_CG9610	NP_001036687.1	370	Pox meso
3R	NT_033777.3	8321747	8323054	+	40991	Or85a	Dmel_CG7454	NP_524277.1	397	odorant receptor 85a
3R	NT_033777.3	8324377	8324901	+	40992	CG7443	Dmel_CG7443	NP_001287232.1	131	CG7443, isoform B
3R	NT_033777.3	8324377	8324901	+	40992	CG7443	Dmel_CG7443	NP_649791.1	139	CG7443, isoform A
3R	NT_033777.3	8340520	8340868	-	50002	COX7A	Dmel_CG9603	NP_001246986.1	98	cytochrome c oxidase subunit 7A, isoform B
3R	NT_033777.3	8340520	8340930	-	50002	COX7A	Dmel_CG9603	NP_652184.2	89	cytochrome c oxidase subunit 7A, isoform A
3R	NT_033777.3	8341179	8341850	+	40993	Arl2	Dmel_CG7435	NP_476886.1	184	ADP ribosylation factor-like 2
3R	NT_033777.3	8341871	8343442	-	40994	CG9601	Dmel_CG9601	NP_649792.3	523	CG9601
3R	NT_033777.3	8343773	8344148	+	40995	COX7AL	Dmel_CG18193	NP_649793.1	106	cytochrome c oxidase subunit 7A-like
3R	NT_033777.3	8344866	8347354	+	40996	DppIII	Dmel_CG7415	NP_731237.1	786	dipeptidyl aminopeptidase III, isoform C
3R	NT_033777.3	8345124	8347354	+	40996	DppIII	Dmel_CG7415	NP_731238.1	723	dipeptidyl aminopeptidase III, isoform B
3R	NT_033777.3	8347764	8349218	+	40997	CG7352	Dmel_CG7352	NP_649795.1	466	CG7352, isoform A
3R	NT_033777.3	8347980	8349218	+	40997	CG7352	Dmel_CG7352	NP_001163550.1	394	CG7352, isoform C
3R	NT_033777.3	8350134	8351705	+	40998	Atg13	Dmel_CG7331	NP_649796.1	523	Autophagy-related 13
3R	NT_033777.3	8357443	8359726	+	40999	stck	Dmel_CG7954	NP_731241.1	345	steamer duck, isoform B
3R	NT_033777.3	8358382	8359726	+	40999	stck	Dmel_CG7954	NP_731242.1	348	steamer duck, isoform C
3R	NT_033777.3	8358487	8359726	+	40999	stck	Dmel_CG7954	NP_524278.1	335	steamer duck, isoform A
3R	NT_033777.3	8358487	8359726	+	40999	stck	Dmel_CG7954	NP_001246987.1	335	steamer duck, isoform D
3R	NT_033777.3	8360095	8362474	-	41000	CG9684	Dmel_CG9684	NP_649797.2	642	CG9684
3R	NT_033777.3	8362880	8363894	+	41001	CG7963	Dmel_CG7963	NP_649798.3	354	CG7963, partial
3R	NT_033777.3	8365091	8443531	-	50003	CG45263	Dmel_CG45263	NP_001246988.1	1148	uncharacterized protein Dmel_CG45263, isoform C
3R	NT_033777.3	8367618	8443531	-	50003	CG45263	Dmel_CG45263	NP_001246989.1	1034	uncharacterized protein Dmel_CG45263, isoform D
3R	NT_033777.3	8368587	8443531	-	50003	CG45263	Dmel_CG45263	NP_001303497.1	711	uncharacterized protein Dmel_CG45263, isoform F
3R	NT_033777.3	8379275	8443531	-	50003	CG45263	Dmel_CG45263	NP_731247.3	732	uncharacterized protein Dmel_CG45263, isoform B
3R	NT_033777.3	8385044	8443531	-	50003	CG45263	Dmel_CG45263	NP_731246.2	1876	uncharacterized protein Dmel_CG45263, isoform E
3R	NT_033777.3	8388539	8443531	-	50003	CG45263	Dmel_CG45263	NP_001303498.1	711	uncharacterized protein Dmel_CG45263, isoform G
3R	NT_033777.3	8419822	8420597	-	41006	Obp85a	Dmel_CG11732	NP_001334691.1	180	Odorant-binding protein 85a
3R	NT_033777.3	8510077	8511358	-	41007	Or85b	Dmel_CG11735	NP_524279.2	390	odorant receptor 85b
3R	NT_033777.3	8511734	8513022	-	41008	Or85c	Dmel_CG17911	NP_524280.2	389	odorant receptor 85c
3R	NT_033777.3	8519620	8521158	+	41009	CG11737	Dmel_CG11737	NP_649803.1	455	uncharacterized protein Dmel_CG11737, isoform A
3R	NT_033777.3	8519620	8521158	+	41009	CG11737	Dmel_CG11737	NP_001262370.1	455	uncharacterized protein Dmel_CG11737, isoform B
3R	NT_033777.3	8519620	8521158	+	41009	CG11737	Dmel_CG11737	NP_001262371.1	455	uncharacterized protein Dmel_CG11737, isoform C
3R	NT_033777.3	8522026	8523520	+	318744	CG31454	Dmel_CG31454	NP_731250.1	455	uncharacterized protein Dmel_CG31454
3R	NT_033777.3	8524421	8526048	+	41010	CG31259	Dmel_CG31259	NP_731251.1	455	uncharacterized protein Dmel_CG31259, isoform A
3R	NT_033777.3	8524421	8526048	+	41010	CG31259	Dmel_CG31259	NP_001287233.1	455	uncharacterized protein Dmel_CG31259, isoform B
3R	NT_033777.3	8528660	8528863	-	5740784	CG11741	Dmel_CG11741	NP_001097709.1	67	uncharacterized protein Dmel_CG11741, isoform A
3R	NT_033777.3	8528660	8528863	-	5740784	CG11741	Dmel_CG11741	NP_001287234.1	67	uncharacterized protein Dmel_CG11741, isoform B
3R	NT_033777.3	8552608	8553968	+	41011	Or85d	Dmel_CG11742	NP_524281.1	412	odorant receptor 85d
3R	NT_033777.3	8560290	8561672	-	41013	pch2	Dmel_CG31453	NP_001287235.1	421	pachytene checkpoint 2, isoform B
3R	NT_033777.3	8560290	8561672	-	41013	pch2	Dmel_CG31453	NP_524282.4	421	pachytene checkpoint 2, isoform A
3R	NT_033777.3	8561945	8562508	-	326141	mRpS18A	Dmel_CG31450	NP_731252.1	155	mitochondrial ribosomal protein S18A
3R	NT_033777.3	8562883	8563364	+	318747	CG31460	Dmel_CG31460	NP_731253.1	141	uncharacterized protein Dmel_CG31460, isoform A
3R	NT_033777.3	8562883	8563364	+	318747	CG31460	Dmel_CG31460	NP_001287236.1	141	uncharacterized protein Dmel_CG31460, isoform B
3R	NT_033777.3	8564255	8568952	+	41014	Cenp-C	Dmel_CG31258	NP_731254.2	1411	centromeric protein-C, isoform A
3R	NT_033777.3	8564255	8568952	+	41014	Cenp-C	Dmel_CG31258	NP_001287237.1	1399	centromeric protein-C, isoform B
3R	NT_033777.3	8591488	8627150	+	41017	5-HT2B	Dmel_CG42796	NP_001262373.1	947	5-hydroxytryptamine (serotonin) receptor 2B, isoform E
3R	NT_033777.3	8591488	8627021	+	41017	5-HT2B	Dmel_CG42796	NP_001287238.1	904	5-hydroxytryptamine (serotonin) receptor 2B, isoform F
3R	NT_033777.3	8591488	8627021	+	41017	5-HT2B	Dmel_CG42796	NP_649806.2	904	5-hydroxytryptamine (serotonin) receptor 2B, isoform D
3R	NT_033777.3	8634320	8635878	-	41018	Or85e	Dmel_CG9700	NP_001262374.1	467	odorant receptor 85e, partial
3R	NT_033777.3	8643588	8645370	-	41019	Cyp313b1	Dmel_CG9716	NP_649807.1	502	Cyp313b1, isoform A
3R	NT_033777.3	8643588	8645370	-	41019	Cyp313b1	Dmel_CG9716	NP_001287239.1	502	Cyp313b1, isoform B
3R	NT_033777.3	8648722	8650511	-	41020	Mkk4	Dmel_CG9738	NP_001262375.1	424	MAP kinase kinase 4, isoform C
3R	NT_033777.3	8648722	8650511	-	41020	Mkk4	Dmel_CG9738	NP_001163551.1	424	MAP kinase kinase 4, isoform B
3R	NT_033777.3	8648722	8650511	-	41020	Mkk4	Dmel_CG9738	NP_477353.1	424	MAP kinase kinase 4, isoform A
3R	NT_033777.3	8651117	8651392	+	41021	SLIRP2	Dmel_CG8021	NP_649808.1	91	SRA stem-loop interacting RNA binding protein 2
3R	NT_033777.3	8651513	8652784	-	41022	Dhod	Dmel_CG9741	NP_599138.3	405	dihydroorotate dehydrogenase, isoform D
3R	NT_033777.3	8651513	8652784	-	41022	Dhod	Dmel_CG9741	NP_477224.1	405	dihydroorotate dehydrogenase, isoform A
3R	NT_033777.3	8653121	8653741	+	41023	CG11753	Dmel_CG11753	NP_649809.1	160	uncharacterized protein Dmel_CG11753, isoform A
3R	NT_033777.3	8653121	8653741	+	41023	CG11753	Dmel_CG11753	NP_001262376.1	159	uncharacterized protein Dmel_CG11753, isoform B
3R	NT_033777.3	8653121	8653741	+	41023	CG11753	Dmel_CG11753	NP_001262377.1	159	uncharacterized protein Dmel_CG11753, isoform C
3R	NT_033777.3	8653876	8654109	-	8674035	CG42489	Dmel_CG42489	NP_001262378.1	77	uncharacterized protein Dmel_CG42489, isoform C
3R	NT_033777.3	8653876	8654109	-	8674035	CG42489	Dmel_CG42489	NP_001163552.1	77	uncharacterized protein Dmel_CG42489, isoform A
3R	NT_033777.3	8653876	8654109	-	8674035	CG42489	Dmel_CG42489	NP_001189193.1	77	uncharacterized protein Dmel_CG42489, isoform B
3R	NT_033777.3	8655785	8660007	-	45826	bel	Dmel_CG9748	NP_001262379.1	801	belle, isoform B
3R	NT_033777.3	8655785	8660007	-	45826	bel	Dmel_CG9748	NP_536783.1	798	belle, isoform A
3R	NT_033777.3	8661086	8663726	-	41025	p	Dmel_CG9770	NP_001303455.1	826	pink, isoform B
3R	NT_033777.3	8661086	8663726	-	41025	p	Dmel_CG9770	NP_001303456.1	826	pink, isoform C
3R	NT_033777.3	8661086	8663726	-	41025	p	Dmel_CG9770	NP_649810.1	826	pink, isoform A
3R	NT_033777.3	8664483	8667096	+	41026	CG8032	Dmel_CG8032	NP_001262380.1	583	CG8032, isoform B
3R	NT_033777.3	8664483	8667096	+	41026	CG8032	Dmel_CG8032	NP_649811.1	583	CG8032, isoform A
3R	NT_033777.3	8669825	8673555	+	41027	CG8036	Dmel_CG8036	NP_731263.2	626	CG8036, isoform C
3R	NT_033777.3	8669825	8673555	+	41027	CG8036	Dmel_CG8036	NP_649812.2	626	CG8036, isoform B
3R	NT_033777.3	8671745	8673555	+	41027	CG8036	Dmel_CG8036	NP_731264.1	580	CG8036, isoform D
3R	NT_033777.3	8674187	8675159	+	41028	mRpL19	Dmel_CG8039	NP_524284.1	306	mitochondrial ribosomal protein L19
3R	NT_033777.3	8675381	8676518	-	41029	CG9773	Dmel_CG9773	NP_649813.1	275	CG9773
3R	NT_033777.3	8677114	8678160	+	41030	CG8043	Dmel_CG8043	NP_649814.1	348	CG8043
3R	NT_033777.3	8678285	8678749	+	41031	CG11755	Dmel_CG11755	NP_649815.1	154	uncharacterized protein Dmel_CG11755, isoform A
3R	NT_033777.3	8678285	8678749	+	41031	CG11755	Dmel_CG11755	NP_001262381.1	154	uncharacterized protein Dmel_CG11755, isoform B
3R	NT_033777.3	8678954	8680011	-	2768664	CG33325	Dmel_CG33325	NP_996182.2	313	uncharacterized protein Dmel_CG33325
3R	NT_033777.3	8684863	8685024	-	14462442	CG44227	Dmel_CG44227	NP_001262382.1	53	uncharacterized protein Dmel_CG44227
3R	NT_033777.3	8691878	8694154	-	41032	hb	Dmel_CG9786	NP_731267.1	758	hunchback, isoform A
3R	NT_033777.3	8691878	8694154	-	41032	hb	Dmel_CG9786	NP_731268.1	758	hunchback, isoform B
3R	NT_033777.3	8713122	8713839	+	41033	CG8112	Dmel_CG8112	NP_001246991.1	218	CG8112, isoform C
3R	NT_033777.3	8713122	8715176	+	41033	CG8112	Dmel_CG8112	NP_731269.2	559	CG8112, isoform B
3R	NT_033777.3	8713122	8713900	+	41033	CG8112	Dmel_CG8112	NP_001287240.1	222	CG8112, isoform D
3R	NT_033777.3	8715437	8715797	-	41034	Cks85A	Dmel_CG9790	NP_649817.1	96	Cyclin-dependent kinase subunit 85A, isoform A
3R	NT_033777.3	8715437	8715797	-	41034	Cks85A	Dmel_CG9790	NP_001262383.1	96	Cyclin-dependent kinase subunit 85A, isoform C
3R	NT_033777.3	8715437	8715797	-	41034	Cks85A	Dmel_CG9790	NP_001246992.1	96	Cyclin-dependent kinase subunit 85A, isoform B
3R	NT_033777.3	8717125	8718042	+	41035	CG8116	Dmel_CG8116	NP_001163553.1	136	CG8116, isoform B
3R	NT_033777.3	8717125	8718042	+	41035	CG8116	Dmel_CG8116	NP_001163554.1	136	CG8116, isoform C
3R	NT_033777.3	8717125	8718042	+	41035	CG8116	Dmel_CG8116	NP_649818.1	136	CG8116, isoform A
3R	NT_033777.3	8719333	8719997	+	41036	CG11760	Dmel_CG11760	NP_649819.1	149	uncharacterized protein Dmel_CG11760
3R	NT_033777.3	8721540	8722926	+	41037	CG8136	Dmel_CG8136	NP_731272.1	441	CG8136, isoform B
3R	NT_033777.3	8721540	8722926	+	41037	CG8136	Dmel_CG8136	NP_649820.1	440	CG8136, isoform A
3R	NT_033777.3	8721643	8722926	+	41037	CG8136	Dmel_CG8136	NP_001163555.1	427	CG8136, isoform D
3R	NT_033777.3	8721643	8722926	+	41037	CG8136	Dmel_CG8136	NP_996183.1	427	CG8136, isoform C
3R	NT_033777.3	8723242	8724676	+	41038	nom	Dmel_CG8145	NP_001287241.1	370	numerous disordered muscles, isoform C
3R	NT_033777.3	8723242	8724676	+	41038	nom	Dmel_CG8145	NP_001262384.1	370	numerous disordered muscles, isoform B
3R	NT_033777.3	8723242	8724676	+	41038	nom	Dmel_CG8145	NP_649821.2	370	numerous disordered muscles, isoform A
3R	NT_033777.3	8725484	8726533	+	41039	ouib	Dmel_CG11762	NP_649822.2	312	ouija board
3R	NT_033777.3	8726928	8728316	+	41040	CG8159	Dmel_CG8159	NP_649823.2	399	CG8159
3R	NT_033777.3	8728452	8729660	-	41041	ranshi	Dmel_CG9793	NP_649824.1	346	ranshi
3R	NT_033777.3	8729936	8731582	-	41042	M1BP	Dmel_CG9797	NP_649825.1	418	motif 1 binding protein
3R	NT_033777.3	8732133	8735616	+	41043	CG8202	Dmel_CG8202	NP_649826.3	942	CG8202
3R	NT_033777.3	8736713	8738911	-	41044	CG9801	Dmel_CG9801	NP_731278.1	709	CG9801, isoform B
3R	NT_033777.3	8736713	8738911	-	41044	CG9801	Dmel_CG9801	NP_649827.2	709	CG9801, isoform A
3R	NT_033777.3	8736713	8738911	-	41044	CG9801	Dmel_CG9801	NP_996184.1	709	CG9801, isoform C
3R	NT_033777.3	8750241	8750915	-	4379850	CG34135	Dmel_CG34135	NP_001262385.1	202	uncharacterized protein Dmel_CG34135, isoform D
3R	NT_033777.3	8750433	8750915	-	4379850	CG34135	Dmel_CG34135	NP_001036689.1	138	uncharacterized protein Dmel_CG34135, isoform B
3R	NT_033777.3	8750433	8750915	-	4379850	CG34135	Dmel_CG34135	NP_001036688.2	138	uncharacterized protein Dmel_CG34135, isoform C
3R	NT_033777.3	8752082	8753799	+	41045	CG8223	Dmel_CG8223	NP_649828.1	492	CG8223, isoform A
3R	NT_033777.3	8752082	8753799	+	41045	CG8223	Dmel_CG8223	NP_001246993.1	492	CG8223, isoform B
3R	NT_033777.3	8754109	8755669	-	4379850	CG34135	Dmel_CG34135	NP_001246994.1	494	uncharacterized protein Dmel_CG11768, isoform C
3R	NT_033777.3	8754109	8755669	-	4379850	CG34135	Dmel_CG34135	NP_001189194.1	494	uncharacterized protein Dmel_CG11768, isoform B
3R	NT_033777.3	8754109	8755669	-	4379850	CG34135	Dmel_CG34135	NP_649829.1	494	uncharacterized protein Dmel_CG11768, isoform A
3R	NT_033777.3	8769505	8771022	+	41047	CG8236	Dmel_CG8236	NP_649830.2	440	CG8236
3R	NT_033777.3	8771280	8772672	-	41048	CG13318	Dmel_CG13318	NP_649831.1	405	uncharacterized protein Dmel_CG13318
3R	NT_033777.3	8773444	8773770	+	5740866	CG34301	Dmel_CG34301	NP_001097710.1	85	uncharacterized protein Dmel_CG34301
3R	NT_033777.3	8774613	8777927	-	8674049	Pif1A	Dmel_CG42599	NP_001027155.1	1041	PFTAIRE-interacting factor 1B, isoform B
3R	NT_033777.3	8774613	8777927	-	8674049	Pif1A	Dmel_CG42599	NP_001303499.1	1041	PFTAIRE-interacting factor 1B, isoform E
3R	NT_033777.3	8774613	8777927	-	8674049	Pif1A	Dmel_CG42599	NP_001027156.1	1041	PFTAIRE-interacting factor 1B, isoform A
3R	NT_033777.3	8774613	8777927	-	8674049	Pif1A	Dmel_CG42599	NP_001262387.1	1041	PFTAIRE-interacting factor 1B, isoform D
3R	NT_033777.3	8774613	8777927	-	8674049	Pif1A	Dmel_CG42599	NP_001262386.1	1041	PFTAIRE-interacting factor 1B, isoform C
3R	NT_033777.3	8777927	8797901	-	8674049	Pif1A	Dmel_CG42599	NP_001163556.2	1226	PFTAIRE-interacting factor 1A, isoform G
3R	NT_033777.3	8777927	8790541	-	8674049	Pif1A	Dmel_CG42599	NP_001027158.1	879	PFTAIRE-interacting factor 1A, isoform A
3R	NT_033777.3	8777927	8797901	-	8674049	Pif1A	Dmel_CG42599	NP_001189195.2	1264	PFTAIRE-interacting factor 1A, isoform H
3R	NT_033777.3	8777927	8797901	-	8674049	Pif1A	Dmel_CG42599	NP_001303416.1	1264	PFTAIRE-interacting factor 1A, isoform J
3R	NT_033777.3	8778406	8779836	-	251270	CG33191	Dmel_CG33191	NP_788598.1	476	uncharacterized protein Dmel_CG33191
3R	NT_033777.3	8780199	8780732	-	326328	CG33189	Dmel_CG33189	NP_788599.1	177	uncharacterized protein Dmel_CG33189
3R	NT_033777.3	8780984	8783431	-	8674049	Pif1A	Dmel_CG42599	NP_001027157.2	796	PFTAIRE-interacting factor 1A, isoform I
3R	NT_033777.3	8794684	8796645	+	41052	Ir85a	Dmel_CG11775	NP_649833.1	605	ionotropic receptor 85a
3R	NT_033777.3	8801678	8806019	+	41054	Tcp-1eta	Dmel_CG8351	NP_649835.1	544	Tcp-1eta
3R	NT_033777.3	8803565	8805498	-	41055	CG9839	Dmel_CG9839	NP_001262388.1	622	CG9839, isoform B
3R	NT_033777.3	8803565	8805498	-	41055	CG9839	Dmel_CG9839	NP_649836.1	622	CG9839, isoform A
3R	NT_033777.3	8806366	8807183	+	41056	hng2	Dmel_CG8359	NP_649837.1	254	hinge2
3R	NT_033777.3	8809098	8809782	-	41057	CG9837	Dmel_CG9837	NP_649838.5	207	CG9837, isoform E
3R	NT_033777.3	8809098	8809661	-	41057	CG9837	Dmel_CG9837	NP_001163557.2	187	CG9837, isoform D
3R	NT_033777.3	8809098	8809782	-	41057	CG9837	Dmel_CG9837	NP_001262389.1	207	CG9837, isoform F
3R	NT_033777.3	8817863	8818720	-	41058	CG9821	Dmel_CG9821	NP_788602.1	285	CG9821, isoform B
3R	NT_033777.3	8817863	8818720	-	41058	CG9821	Dmel_CG9821	NP_001262390.1	285	CG9821, isoform C
3R	NT_033777.3	8817863	8818720	-	41058	CG9821	Dmel_CG9821	NP_001262391.1	285	CG9821, isoform D
3R	NT_033777.3	8817863	8818720	-	41058	CG9821	Dmel_CG9821	NP_788601.1	285	CG9821, isoform A
3R	NT_033777.3	8822098	8822782	+	50005	CG8369	Dmel_CG8369	NP_652187.1	94	CG8369, isoform A
3R	NT_033777.3	8822471	8822782	+	50005	CG8369	Dmel_CG8369	NP_001246996.2	84	CG8369, isoform D
3R	NT_033777.3	8822471	8822782	+	50005	CG8369	Dmel_CG8369	NP_001246997.2	84	CG8369, isoform E
3R	NT_033777.3	8823424	8824071	-	41059	IscU	Dmel_CG9836	NP_649840.1	154	Iron-sulfur cluster assembly enzyme
3R	NT_033777.3	8824555	8827097	+	41060	CG8379	Dmel_CG8379	NP_996185.1	707	CG8379, isoform B
3R	NT_033777.3	8824555	8827097	+	41060	CG8379	Dmel_CG8379	NP_649841.1	706	CG8379, isoform A
3R	NT_033777.3	8828095	8862782	-	41062	pyd	Dmel_CG43140	NP_001246998.1	2395	polychaetoid, isoform O
3R	NT_033777.3	8828095	8844954	-	41062	pyd	Dmel_CG43140	NP_731291.2	2090	polychaetoid, isoform A
3R	NT_033777.3	8828315	8844954	-	41062	pyd	Dmel_CG43140	NP_731292.2	1293	polychaetoid, isoform C
3R	NT_033777.3	8828315	8844954	-	41062	pyd	Dmel_CG43140	NP_001097711.1	1301	polychaetoid, isoform G
3R	NT_033777.3	8828315	8857134	-	41062	pyd	Dmel_CG43140	NP_001138028.1	1386	polychaetoid, isoform I
3R	NT_033777.3	8828315	8844954	-	41062	pyd	Dmel_CG43140	NP_001247001.1	1301	polychaetoid, isoform M
3R	NT_033777.3	8828315	8844954	-	41062	pyd	Dmel_CG43140	NP_476697.3	1371	polychaetoid, isoform B
3R	NT_033777.3	8828315	8931256	-	41062	pyd	Dmel_CG43140	NP_731293.3	1735	polychaetoid, isoform J
3R	NT_033777.3	8833608	8844954	-	41062	pyd	Dmel_CG43140	NP_788603.1	1149	polychaetoid, isoform F
3R	NT_033777.3	8836589	8865190	-	41062	pyd	Dmel_CG43140	NP_001247000.1	1285	polychaetoid, isoform L
3R	NT_033777.3	8836589	8865778	-	41062	pyd	Dmel_CG43140	NP_001097712.1	1446	polychaetoid, isoform K
3R	NT_033777.3	8935146	8937367	+	41066	osk	Dmel_CG10901	NP_731295.1	606	oskar, isoform A
3R	NT_033777.3	8935560	8937367	+	41066	osk	Dmel_CG10901	NP_996186.1	468	oskar, isoform C
3R	NT_033777.3	8936482	8937367	+	41066	osk	Dmel_CG10901	NP_001303468.1	254	oskar, isoform D
3R	NT_033777.3	8938820	8942834	+	41067	skap	Dmel_CG11963	NP_001163558.1	503	skpA associated protein, isoform C
3R	NT_033777.3	8938820	8942834	+	41067	skap	Dmel_CG11963	NP_649846.2	502	skpA associated protein, isoform A
3R	NT_033777.3	8938820	8942074	+	41067	skap	Dmel_CG11963	NP_001189197.2	451	skpA associated protein, isoform H
3R	NT_033777.3	8938820	8942074	+	41067	skap	Dmel_CG11963	NP_001189198.2	451	skpA associated protein, isoform G
3R	NT_033777.3	8938820	8942834	+	41067	skap	Dmel_CG11963	NP_001163559.1	503	skpA associated protein, isoform D
3R	NT_033777.3	8938820	8942074	+	41067	skap	Dmel_CG11963	NP_001303475.1	452	skpA associated protein, isoform J
3R	NT_033777.3	8938820	8942074	+	41067	skap	Dmel_CG11963	NP_001303476.1	452	skpA associated protein, isoform I
3R	NT_033777.3	8938820	8942834	+	41067	skap	Dmel_CG11963	NP_001097713.1	502	skpA associated protein, isoform B
3R	NT_033777.3	8943058	8944985	-	41068	CG11964	Dmel_CG11964	NP_649847.1	581	uncharacterized protein Dmel_CG11964
3R	NT_033777.3	8952072	8953850	-	41069	CG11966	Dmel_CG11966	NP_649848.2	592	uncharacterized protein Dmel_CG11966, isoform A
3R	NT_033777.3	8952072	8953850	-	41069	CG11966	Dmel_CG11966	NP_001262393.1	592	uncharacterized protein Dmel_CG11966, isoform B
3R	NT_033777.3	8981017	8981923	+	41070	CAHbeta	Dmel_CG11967	NP_001287242.1	61	carbonic anhydrase beta, isoform B
3R	NT_033777.3	8981017	8982640	+	41070	CAHbeta	Dmel_CG11967	NP_649849.1	255	carbonic anhydrase beta, isoform A
3R	NT_033777.3	8983113	8984224	-	41071	RagA-B	Dmel_CG11968	NP_649850.1	311	Ras-related GTP binding A/B
3R	NT_033777.3	8985097	8990398	+	41072	CG11970	Dmel_CG11970	NP_649851.1	1658	uncharacterized protein Dmel_CG11970, isoform A
3R	NT_033777.3	8985097	8990398	+	41072	CG11970	Dmel_CG11970	NP_001287243.1	1658	uncharacterized protein Dmel_CG11970, isoform B
3R	NT_033777.3	8990930	8992865	-	41073	E(var)3-9	Dmel_CG11971	NP_649852.2	588	enhancer of variegation 3-9
3R	NT_033777.3	8993384	8994633	+	41074	CG11975	Dmel_CG11975	NP_001262394.1	340	uncharacterized protein Dmel_CG11975, isoform B
3R	NT_033777.3	8993384	8994633	+	41074	CG11975	Dmel_CG11975	NP_649853.1	340	uncharacterized protein Dmel_CG11975, isoform A
3R	NT_033777.3	8995330	9003590	-	41075	CG31100	Dmel_CG31100	NP_001262395.1	716	uncharacterized protein Dmel_CG31100, isoform B
3R	NT_033777.3	8995330	9000336	-	41075	CG31100	Dmel_CG31100	NP_731299.1	716	uncharacterized protein Dmel_CG31100, isoform A
3R	NT_033777.3	8997701	8998650	+	41076	CG11977	Dmel_CG11977	NP_649855.3	274	uncharacterized protein Dmel_CG11977
3R	NT_033777.3	9004051	9005250	+	41078	CG11980	Dmel_CG11980	NP_731302.1	358	uncharacterized protein Dmel_CG11980, isoform B
3R	NT_033777.3	9004051	9005250	+	41078	CG11980	Dmel_CG11980	NP_649857.1	359	uncharacterized protein Dmel_CG11980, isoform C
3R	NT_033777.3	9004156	9005250	+	41078	CG11980	Dmel_CG11980	NP_731303.2	345	uncharacterized protein Dmel_CG11980, isoform A
3R	NT_033777.3	9005454	9006071	-	41079	Prosbeta3	Dmel_CG11981	NP_649858.1	205	proteasome beta3 subunit
3R	NT_033777.3	9006714	9007856	+	41080	CG11982	Dmel_CG11982	NP_649859.1	380	uncharacterized protein Dmel_CG11982
3R	NT_033777.3	9008586	9009992	+	41081	CG11983	Dmel_CG11983	NP_649860.1	421	uncharacterized protein Dmel_CG11983, isoform A
3R	NT_033777.3	9008586	9009992	+	41081	CG11983	Dmel_CG11983	NP_001262396.1	421	uncharacterized protein Dmel_CG11983, isoform B
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_731306.2	599	uncharacterized protein Dmel_CG11984, isoform H
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_001163562.1	599	uncharacterized protein Dmel_CG11984, isoform G
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_731305.2	599	uncharacterized protein Dmel_CG11984, isoform D
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_649861.3	599	uncharacterized protein Dmel_CG11984, isoform I
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_001163561.1	599	uncharacterized protein Dmel_CG11984, isoform F
3R	NT_033777.3	9010673	9013331	-	41082	CG11984	Dmel_CG11984	NP_001163560.1	599	uncharacterized protein Dmel_CG11984, isoform E
3R	NT_033777.3	9015007	9015264	-	50007	CG11985	Dmel_CG11985	NP_652189.1	85	uncharacterized protein Dmel_CG11985
3R	NT_033777.3	9015500	9016721	+	41083	CG11986	Dmel_CG11986	NP_649862.1	368	uncharacterized protein Dmel_CG11986
3R	NT_033777.3	9017754	9019682	-	41084	tgo	Dmel_CG11987	NP_731308.1	642	tango, isoform A
3R	NT_033777.3	9017754	9019682	-	41084	tgo	Dmel_CG11987	NP_001262397.1	642	tango, isoform B
3R	NT_033777.3	9021793	9039179	-	41085	neur	Dmel_CG11988	NP_731309.1	671	neuralized, isoform D
3R	NT_033777.3	9021793	9033449	-	41085	neur	Dmel_CG11988	NP_731311.1	753	neuralized, isoform B
3R	NT_033777.3	9021793	9033449	-	41085	neur	Dmel_CG11988	NP_476652.1	754	neuralized, isoform A
3R	NT_033777.3	9021793	9039179	-	41085	neur	Dmel_CG11988	NP_001163563.1	672	neuralized, isoform E
3R	NT_033777.3	9021793	9039179	-	41085	neur	Dmel_CG11988	NP_731310.1	672	neuralized, isoform C
3R	NT_033777.3	9039962	9041941	+	41086	hyx	Dmel_CG11990	NP_649863.1	538	hyrax, isoform A
3R	NT_033777.3	9039962	9041941	+	41086	hyx	Dmel_CG11990	NP_001163564.1	538	hyrax, isoform B
3R	NT_033777.3	9042657	9043635	-	47895	Nmdmc	Dmel_CG18466	NP_476930.1	303	NAD-dependent methylenetetrahydrofolate dehydrogenase, isoform A
3R	NT_033777.3	9042657	9050377	-	47895	Nmdmc	Dmel_CG18466	NP_476929.1	309	NAD-dependent methylenetetrahydrofolate dehydrogenase, isoform B
3R	NT_033777.3	9042657	9043635	-	47895	Nmdmc	Dmel_CG18466	NP_001262398.1	303	NAD-dependent methylenetetrahydrofolate dehydrogenase, isoform C
3R	NT_033777.3	9044224	9047435	-	41087	Rel	Dmel_CG11992	NP_996188.1	971	relish, isoform C
3R	NT_033777.3	9044224	9047435	-	41087	Rel	Dmel_CG11992	NP_996189.1	971	relish, isoform B
3R	NT_033777.3	9044224	9047099	-	41087	Rel	Dmel_CG11992	NP_996187.1	859	relish, isoform D
3R	NT_033777.3	9044224	9047435	-	41087	Rel	Dmel_CG11992	NP_477094.1	971	relish, isoform A
3R	NT_033777.3	9050961	9051748	+	41089	Mst85C	Dmel_CG11993	NP_477476.1	242	Mst85C, isoform A
3R	NT_033777.3	9050961	9051748	+	41089	Mst85C	Dmel_CG11993	NP_001262399.1	242	Mst85C, isoform B
3R	NT_033777.3	9053628	9062204	+	41090	Kdm2	Dmel_CG11033	NP_001262400.1	1345	lysine (K)-specific demethylase 2, isoform C
3R	NT_033777.3	9053628	9062204	+	41090	Kdm2	Dmel_CG11033	NP_001262402.1	1345	lysine (K)-specific demethylase 2, isoform E
3R	NT_033777.3	9053628	9062204	+	41090	Kdm2	Dmel_CG11033	NP_001262401.1	1345	lysine (K)-specific demethylase 2, isoform D
3R	NT_033777.3	9053628	9062204	+	41090	Kdm2	Dmel_CG11033	NP_649864.2	1345	lysine (K)-specific demethylase 2, isoform B
3R	NT_033777.3	9063251	9064989	-	41091	beag	Dmel_CG18005	NP_649865.1	557	beag
3R	NT_033777.3	9065239	9066252	+	41092	Ada	Dmel_CG11994	NP_649866.1	337	adenosine deaminase
3R	NT_033777.3	9070945	9233861	-	41094	pum	Dmel_CG9755	NP_731314.1	1533	pumilio, isoform A
3R	NT_033777.3	9070945	9157261	-	41094	pum	Dmel_CG9755	NP_001247002.1	925	pumilio, isoform F
3R	NT_033777.3	9070945	9233861	-	41094	pum	Dmel_CG9755	NP_731315.1	1533	pumilio, isoform D
3R	NT_033777.3	9070945	9157261	-	41094	pum	Dmel_CG9755	NP_001262404.1	921	pumilio, isoform H
3R	NT_033777.3	9070945	9233861	-	41094	pum	Dmel_CG9755	NP_001262403.1	1533	pumilio, isoform G
3R	NT_033777.3	9070945	9226292	-	41094	pum	Dmel_CG9755	NP_731316.2	1185	pumilio, isoform B
3R	NT_033777.3	9070945	9157261	-	41094	pum	Dmel_CG9755	NP_788604.1	935	pumilio, isoform E
3R	NT_033777.3	9070945	9233861	-	41094	pum	Dmel_CG9755	NP_524285.2	1533	pumilio, isoform C
3R	NT_033777.3	9177562	9178872	+	41093	CG11997	Dmel_CG11997	NP_649867.1	417	uncharacterized protein Dmel_CG11997
3R	NT_033777.3	9238519	9239904	-	41095	D1	Dmel_CG9745	NP_731319.1	355	D1 chromosomal protein, isoform D
3R	NT_033777.3	9238519	9239904	-	41095	D1	Dmel_CG9745	NP_731320.1	355	D1 chromosomal protein, isoform C
3R	NT_033777.3	9238519	9239904	-	41095	D1	Dmel_CG9745	NP_524286.1	355	D1 chromosomal protein, isoform A
3R	NT_033777.3	9240851	9245753	-	41096	Vps15	Dmel_CG9746	NP_649868.1	1342	vacuolar protein sorting 15, isoform A
3R	NT_033777.3	9242663	9245753	-	41096	Vps15	Dmel_CG9746	NP_001262405.1	861	vacuolar protein sorting 15, isoform C
3R	NT_033777.3	9242825	9245753	-	41096	Vps15	Dmel_CG9746	NP_001163565.1	851	vacuolar protein sorting 15, isoform B
3R	NT_033777.3	9247674	9251293	+	41097	CG8420	Dmel_CG8420	NP_649869.1	531	CG8420, isoform A
3R	NT_033777.3	9249942	9251293	+	41097	CG8420	Dmel_CG8420	NP_001262406.1	220	CG8420, isoform B
3R	NT_033777.3	9251871	9252965	+	41098	St2	Dmel_CG16733	NP_001287244.1	316	sulfotransferase 2, isoform B
3R	NT_033777.3	9251871	9252965	+	41098	St2	Dmel_CG16733	NP_649870.1	316	sulfotransferase 2, isoform A
3R	NT_033777.3	9255094	9256712	+	41100	CG16734	Dmel_CG16734	NP_649872.2	443	uncharacterized protein Dmel_CG16734
3R	NT_033777.3	9256725	9257678	-	41101	CG16736	Dmel_CG16736	NP_649873.1	277	uncharacterized protein Dmel_CG16736
3R	NT_033777.3	9257786	9258440	-	41102	Ibf2	Dmel_CG9740	NP_649874.1	195	insulator binding factor 2
3R	NT_033777.3	9259048	9260250	+	41103	Ibf1	Dmel_CG8436	NP_649875.1	242	insulator binding factor 1, isoform A
3R	NT_033777.3	9259048	9260250	+	41103	Ibf1	Dmel_CG8436	NP_001287245.1	237	insulator binding factor 1, isoform B
3R	NT_033777.3	9260725	9262172	+	41104	VhaM8.9	Dmel_CG8444	NP_649876.1	320	vacuolar 
3R	NT_033777.3	9262875	9263742	-	41105	sage	Dmel_CG12952	NP_731326.2	268	salivary gland-expressed bHLH, isoform C
3R	NT_033777.3	9262875	9263742	-	41105	sage	Dmel_CG12952	NP_524287.1	268	salivary gland-expressed bHLH, isoform A
3R	NT_033777.3	9265304	9266791	-	45399	TrpRS	Dmel_CG9735	NP_524826.1	430	Tryptophanyl-tRNA synthetase
3R	NT_033777.3	9267122	9270088	+	41107	Vps16A	Dmel_CG8454	NP_649877.1	833	vacuolar protein sorting 16A
3R	NT_033777.3	9295406	9327020	-	41109	CG8861	Dmel_CG8861	NP_649879.2	178	CG8861, isoform B
3R	NT_033777.3	9295406	9327020	-	41109	CG8861	Dmel_CG8861	NP_001163567.1	178	CG8861, isoform C
3R	NT_033777.3	9321826	9322350	+	41108	HP1e	Dmel_CG8120	NP_649878.1	174	heterochromatin protein 1e
3R	NT_033777.3	9329276	9330325	-	41110	CG12951	Dmel_CG12951	NP_649880.1	265	uncharacterized protein Dmel_CG12951
3R	NT_033777.3	9330954	9331879	-	41111	CG16749	Dmel_CG16749	NP_649881.1	265	uncharacterized protein Dmel_CG16749
3R	NT_033777.3	9332068	9334597	-	41112	CG8866	Dmel_CG8866	NP_731331.1	520	CG8866, isoform A
3R	NT_033777.3	9332662	9334597	-	41112	CG8866	Dmel_CG8866	NP_649882.1	465	CG8866, isoform B
3R	NT_033777.3	9335562	9336880	+	41113	pasi2	Dmel_CG8121	NP_649883.1	258	pasiflora 2, isoform A
3R	NT_033777.3	9335562	9336880	+	41113	pasi2	Dmel_CG8121	NP_731333.1	258	pasiflora 2, isoform B
3R	NT_033777.3	9335562	9336880	+	41113	pasi2	Dmel_CG8121	NP_731334.1	258	pasiflora 2, isoform C
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001262409.1	199	uncharacterized protein Dmel_CG45050, isoform E
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001262408.1	199	uncharacterized protein Dmel_CG45050, isoform D
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001027162.1	199	uncharacterized protein Dmel_CG45050, isoform F
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001287246.1	199	uncharacterized protein Dmel_CG45050, isoform G
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001027161.1	199	uncharacterized protein Dmel_CG45050, isoform C
3R	NT_033777.3	9354756	9358404	+	41114	CG45050	Dmel_CG45050	NP_001262407.1	199	uncharacterized protein Dmel_CG45050, isoform B
3R	NT_033777.3	9356058	9357274	+	14462445	CG43675	Dmel_CG43675	NP_001027159.2	372	uncharacterized protein Dmel_CG43675, isoform D
3R	NT_033777.3	9356058	9357274	+	14462445	CG43675	Dmel_CG43675	NP_001027160.2	372	uncharacterized protein Dmel_CG43675, isoform B
3R	NT_033777.3	9356058	9357274	+	14462445	CG43675	Dmel_CG43675	NP_001287248.1	372	uncharacterized protein Dmel_CG43675, isoform C
3R	NT_033777.3	9357246	9358404	+	14462445	CG43675	Dmel_CG43675	NP_001262410.2	183	uncharacterized protein Dmel_CG45050, isoform H
3R	NT_033777.3	9357246	9358404	+	14462445	CG43675	Dmel_CG43675	NP_001287247.1	183	uncharacterized protein Dmel_CG45050, isoform I
3R	NT_033777.3	9363425	9364729	+	41116	CG18473	Dmel_CG18473	NP_731339.1	350	uncharacterized protein Dmel_CG18473
3R	NT_033777.3	9365457	9367598	+	41117	CG8129	Dmel_CG8129	NP_649886.1	469	CG8129, isoform B
3R	NT_033777.3	9366527	9367598	+	41117	CG8129	Dmel_CG8129	NP_731340.1	316	CG8129, isoform A
3R	NT_033777.3	9368241	9392936	-	41118	FER	Dmel_CG8874	NP_524288.3	1325	FER tyrosine kinase, isoform A
3R	NT_033777.3	9368241	9373099	-	41118	FER	Dmel_CG8874	NP_731342.1	475	FER tyrosine kinase, isoform C
3R	NT_033777.3	9368241	9392936	-	41118	FER	Dmel_CG8874	NP_001262412.1	872	FER tyrosine kinase, isoform F
3R	NT_033777.3	9368241	9392936	-	41118	FER	Dmel_CG8874	NP_001262411.1	871	FER tyrosine kinase, isoform E
3R	NT_033777.3	9368241	9371056	-	41118	FER	Dmel_CG8874	NP_731343.1	393	FER tyrosine kinase, isoform D
3R	NT_033777.3	9368241	9392936	-	41118	FER	Dmel_CG8874	NP_731341.1	804	FER tyrosine kinase, isoform B
3R	NT_033777.3	9398190	9399551	+	41119	Or85f	Dmel_CG16755	NP_524289.1	392	odorant receptor 85f
3R	NT_033777.3	9399634	9399939	-	4379851	CG34117	Dmel_CG34117	NP_001036690.1	101	uncharacterized protein Dmel_CG34117
3R	NT_033777.3	9400437	9401006	-	41120	RpL34b	Dmel_CG9354	NP_001287250.1	168	ribosomal protein L34b, isoform D
3R	NT_033777.3	9400437	9401006	-	41120	RpL34b	Dmel_CG9354	NP_731345.1	168	ribosomal protein L34b, isoform B
3R	NT_033777.3	9400437	9401006	-	41120	RpL34b	Dmel_CG9354	NP_001287249.1	168	ribosomal protein L34b, isoform C
3R	NT_033777.3	9400437	9401006	-	41120	RpL34b	Dmel_CG9354	NP_649887.1	168	ribosomal protein L34b, isoform A
3R	NT_033777.3	9401567	9402473	+	41121	CG8132	Dmel_CG8132	NP_649888.1	283	CG8132
3R	NT_033777.3	9402624	9404039	-	41122	CG9356	Dmel_CG9356	NP_649889.1	448	CG9356, isoform A
3R	NT_033777.3	9402624	9404039	-	41122	CG9356	Dmel_CG9356	NP_731347.1	448	CG9356, isoform B
3R	NT_033777.3	9404547	9404777	+	8674100	CG42511	Dmel_CG42511	NP_001163568.1	76	uncharacterized protein Dmel_CG42511
3R	NT_033777.3	9404919	9407709	+	8674100	CG42511	Dmel_CG42511	NP_649890.1	694	CG8135
3R	NT_033777.3	9407849	9408145	-	19835876	CG44261	Dmel_CG44261	NP_001287251.1	98	uncharacterized protein Dmel_CG44261
3R	NT_033777.3	9408653	9410052	-	41124	betaTub85D	Dmel_CG9359	NP_524290.2	446	beta-Tubulin at 85D
3R	NT_033777.3	9410757	9412017	-	41125	Task7	Dmel_CG9361	NP_649891.1	340	TWIK-related acid-sensitive 
3R	NT_033777.3	9412694	9416738	+	41126	alpha-Man-IIa	Dmel_CG18802	NP_524291.2	1108	alpha-Mannosidase class II a, isoform A
3R	NT_033777.3	9412694	9416738	+	41126	alpha-Man-IIa	Dmel_CG18802	NP_001262413.1	1109	alpha-Mannosidase class II a, isoform B
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001189202.1	550	pasilla, isoform M
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001189201.1	550	pasilla, isoform P
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001189199.1	572	pasilla, isoform N
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001036692.1	572	pasilla, isoform F
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001036695.1	550	pasilla, isoform K
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_731352.3	572	pasilla, isoform G
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_731351.3	572	pasilla, isoform H
3R	NT_033777.3	9432722	9447849	+	44258	ps	Dmel_CG42670	NP_001189203.1	572	pasilla, isoform O
3R	NT_033777.3	9434404	9446526	+	44258	ps	Dmel_CG42670	NP_731354.1	475	pasilla, isoform B
3R	NT_033777.3	9434404	9447849	+	44258	ps	Dmel_CG42670	NP_001036697.1	539	pasilla, isoform J
3R	NT_033777.3	9434404	9447849	+	44258	ps	Dmel_CG42670	NP_001262414.1	517	pasilla, isoform Q
3R	NT_033777.3	9436968	9447849	+	44258	ps	Dmel_CG42670	NP_731355.1	583	pasilla, isoform D
3R	NT_033777.3	9436968	9446526	+	44258	ps	Dmel_CG42670	NP_001036691.1	519	pasilla, isoform I
3R	NT_033777.3	9436968	9447849	+	44258	ps	Dmel_CG42670	NP_731356.1	561	pasilla, isoform C
3R	NT_033777.3	9440924	9447849	+	44258	ps	Dmel_CG42670	NP_001262415.1	780	pasilla, isoform R
3R	NT_033777.3	9440924	9447849	+	44258	ps	Dmel_CG42670	NP_001189200.1	758	pasilla, isoform L
3R	NT_033777.3	9441416	9447849	+	44258	ps	Dmel_CG42670	NP_001287252.1	594	pasilla, isoform S
3R	NT_033777.3	9441416	9447849	+	44258	ps	Dmel_CG42670	NP_001287253.1	616	pasilla, isoform T
3R	NT_033777.3	9455588	9456445	-	41132	GstZ1	Dmel_CG9362	NP_649894.1	246	glutathione S transferase Z1
3R	NT_033777.3	9457996	9458817	-	41133	GstZ2	Dmel_CG9363	NP_649895.1	227	glutathione S transferase Z2, isoform A
3R	NT_033777.3	9457996	9460294	-	41133	GstZ2	Dmel_CG9363	NP_731358.1	220	glutathione S transferase Z2, isoform B
3R	NT_033777.3	9457996	9459136	-	41133	GstZ2	Dmel_CG9363	NP_996190.1	215	glutathione S transferase Z2, isoform C
3R	NT_033777.3	9466490	9475783	-	41134	CG16779	Dmel_CG16779	NP_001287254.1	1980	uncharacterized protein Dmel_CG16779, isoform E
3R	NT_033777.3	9466490	9475783	-	41134	CG16779	Dmel_CG16779	NP_001262416.1	1980	uncharacterized protein Dmel_CG16779, isoform B
3R	NT_033777.3	9466490	9475783	-	41134	CG16779	Dmel_CG16779	NP_649896.1	1980	uncharacterized protein Dmel_CG16779, isoform A
3R	NT_033777.3	9466620	9475783	-	41134	CG16779	Dmel_CG16779	NP_001262418.1	1795	uncharacterized protein Dmel_CG16779, isoform D
3R	NT_033777.3	9467401	9475783	-	41134	CG16779	Dmel_CG16779	NP_001262417.1	1946	uncharacterized protein Dmel_CG16779, isoform C
3R	NT_033777.3	9494888	9496589	+	41135	phu	Dmel_CG8147	NP_649897.4	546	phurba tashi
3R	NT_033777.3	9497417	9498125	-	41136	RhoL	Dmel_CG9366	NP_524292.1	190	Rho-like, isoform A
3R	NT_033777.3	9497417	9498265	-	41136	RhoL	Dmel_CG9366	NP_001247003.1	214	Rho-like, isoform B
3R	NT_033777.3	9504725	9505705	+	41137	CG8149	Dmel_CG8149	NP_649898.1	308	CG8149
3R	NT_033777.3	9506144	9510010	-	41138	rump	Dmel_CG9373	NP_649899.1	632	rumpelstiltskin, isoform A
3R	NT_033777.3	9507317	9510010	-	41138	rump	Dmel_CG9373	NP_001247004.1	214	rumpelstiltskin, isoform B
3R	NT_033777.3	9511508	9512291	-	41140	Ras85D	Dmel_CG9375	NP_476699.1	189	Ras oncogene at 85D
3R	NT_033777.3	9513363	9514811	+	41139	Rlb1	Dmel_CG8161	NP_477099.1	463	Rlb1
3R	NT_033777.3	9514869	9515866	-	41141	mRpL47	Dmel_CG9378	NP_788610.1	271	mitochondrial ribosomal protein L47
3R	NT_033777.3	9518275	9520839	+	41143	JHDM2	Dmel_CG8165	NP_788611.1	854	JmjC domain-containing histone demethylase 2, isoform A
3R	NT_033777.3	9518275	9520839	+	41143	JHDM2	Dmel_CG8165	NP_001287255.1	854	JmjC domain-containing histone demethylase 2, isoform B
3R	NT_033777.3	9521321	9526603	+	261329	CG8176	Dmel_CG8176	NP_001097724.2	1220	CG8176, isoform F
3R	NT_033777.3	9521321	9526603	+	261329	CG8176	Dmel_CG8176	NP_788613.2	1133	CG8176, isoform E
3R	NT_033777.3	9521321	9526603	+	261329	CG8176	Dmel_CG8176	NP_001097723.1	1220	CG8176, isoform C
3R	NT_033777.3	9521321	9526603	+	261329	CG8176	Dmel_CG8176	NP_788612.1	1133	CG8176, isoform A
3R	NT_033777.3	9521321	9526603	+	261329	CG8176	Dmel_CG8176	NP_001262419.1	1161	CG8176, isoform G
3R	NT_033777.3	9530822	9532984	-	41144	by	Dmel_CG9379	NP_001163570.1	720	blistery, isoform C
3R	NT_033777.3	9530822	9532984	-	41144	by	Dmel_CG9379	NP_001163569.1	720	blistery, isoform D
3R	NT_033777.3	9530822	9532984	-	41144	by	Dmel_CG9379	NP_649901.1	720	blistery, isoform A
3R	NT_033777.3	9539096	9547186	-	41145	mura	Dmel_CG9381	NP_731367.2	1173	murashka, isoform C
3R	NT_033777.3	9539096	9547186	-	41145	mura	Dmel_CG9381	NP_731366.1	868	murashka, isoform B
3R	NT_033777.3	9539096	9547186	-	41145	mura	Dmel_CG9381	NP_649902.2	868	murashka, isoform A
3R	NT_033777.3	9552183	9553651	+	41147	RnpS1	Dmel_CG16788	NP_649903.1	374	RNA-binding protein S1
3R	NT_033777.3	9553763	9555389	-	41148	CG9386	Dmel_CG9386	NP_649904.2	521	CG9386
3R	NT_033777.3	9555875	9557436	+	41149	CG8199	Dmel_CG8199	NP_649905.1	439	CG8199
3R	NT_033777.3	9557910	9559249	-	41150	AP-1mu	Dmel_CG9388	NP_649906.1	426	adaptor protein complex 1, mu subunit
3R	NT_033777.3	9559841	9561412	+	41151	MBD-like	Dmel_CG8208	NP_731370.1	339	Methyl-CpG binding domain protein-like, isoform A
3R	NT_033777.3	9559841	9561412	+	41151	MBD-like	Dmel_CG8208	NP_001262421.1	340	Methyl-CpG binding domain protein-like, isoform C
3R	NT_033777.3	9559841	9561412	+	41151	MBD-like	Dmel_CG8208	NP_649907.1	226	Methyl-CpG binding domain protein-like, isoform B
3R	NT_033777.3	9561927	9563522	-	41152	CG9393	Dmel_CG9393	NP_649908.1	327	CG9393, isoform A
3R	NT_033777.3	9562070	9563522	-	41152	CG9393	Dmel_CG9393	NP_001262422.1	316	CG9393, isoform B
3R	NT_033777.3	9564026	9565864	+	41153	Vps45	Dmel_CG8228	NP_649909.1	574	vacuolar protein sorting 45
3R	NT_033777.3	9566224	9569015	+	41154	CG16789	Dmel_CG16789	NP_001262423.1	824	uncharacterized protein Dmel_CG16789, isoform B
3R	NT_033777.3	9566224	9568980	+	41154	CG16789	Dmel_CG16789	NP_649910.3	831	uncharacterized protein Dmel_CG16789, isoform A
3R	NT_033777.3	9569251	9570140	-	41155	CG16790	Dmel_CG16790	NP_649911.1	258	uncharacterized protein Dmel_CG16790, isoform A
3R	NT_033777.3	9569910	9570140	-	41155	CG16790	Dmel_CG16790	NP_001262424.1	52	uncharacterized protein Dmel_CG16790, isoform B
3R	NT_033777.3	9570483	9571379	-	41156	CG9396	Dmel_CG9396	NP_649912.1	151	CG9396
3R	NT_033777.3	9572497	9573519	-	41157	CG9399	Dmel_CG9399	NP_731376.1	154	CG9399, isoform B
3R	NT_033777.3	9572497	9573519	-	41157	CG9399	Dmel_CG9399	NP_649913.1	154	CG9399, isoform A
3R	NT_033777.3	9572497	9573519	-	41157	CG9399	Dmel_CG9399	NP_001163571.1	154	CG9399, isoform D
3R	NT_033777.3	9572497	9573417	-	41157	CG9399	Dmel_CG9399	NP_001262425.1	120	CG9399, isoform E
3R	NT_033777.3	9575474	9577267	-	41158	Kap-alpha3	Dmel_CG9423	NP_001163572.1	514	karyopherin alpha3, isoform D
3R	NT_033777.3	9575474	9577267	-	41158	Kap-alpha3	Dmel_CG9423	NP_788614.1	514	karyopherin alpha3, isoform C
3R	NT_033777.3	9575474	9577267	-	41158	Kap-alpha3	Dmel_CG9423	NP_731378.1	514	karyopherin alpha3, isoform B
3R	NT_033777.3	9575474	9577267	-	41158	Kap-alpha3	Dmel_CG9423	NP_731377.1	514	karyopherin alpha3, isoform A
3R	NT_033777.3	9578180	9580863	+	41159	CG8273	Dmel_CG8273	NP_649914.1	874	CG8273, isoform A
3R	NT_033777.3	9578180	9580863	+	41159	CG8273	Dmel_CG8273	NP_001262426.1	874	CG8273, isoform B
3R	NT_033777.3	9581969	9586041	+	41160	CG8301	Dmel_CG8301	NP_649915.1	607	CG8301
3R	NT_033777.3	9582515	9583222	-	3771825	CG33654	Dmel_CG33654	NP_001027165.1	168	uncharacterized protein Dmel_CG33654
3R	NT_033777.3	9587363	9589282	+	41161	P58IPK	Dmel_CG8286	NP_649916.1	498	P58IPK
3R	NT_033777.3	9589730	9590929	-	41162	bocks	Dmel_CG9424	NP_001014611.1	399	bocksbeutel, isoform B
3R	NT_033777.3	9589774	9590929	-	41162	bocks	Dmel_CG9424	NP_649917.1	351	bocksbeutel, isoform A
3R	NT_033777.3	9621583	9624578	+	41163	CG8312	Dmel_CG8312	NP_001262428.1	865	CG8312, isoform D
3R	NT_033777.3	9621583	9624578	+	41163	CG8312	Dmel_CG8312	NP_649918.1	866	CG8312, isoform A
3R	NT_033777.3	9621583	9624578	+	41163	CG8312	Dmel_CG8312	NP_001262427.1	865	CG8312, isoform C
3R	NT_033777.3	9623235	9624578	+	41163	CG8312	Dmel_CG8312	NP_788615.1	447	CG8312, isoform B
3R	NT_033777.3	9625222	9626915	-	41164	CG9427	Dmel_CG9427	NP_001262429.1	212	CG9427, isoform B
3R	NT_033777.3	9625222	9626336	-	41164	CG9427	Dmel_CG9427	NP_649919.1	213	CG9427, isoform A
3R	NT_033777.3	9627398	9628610	+	41165	CG8319	Dmel_CG8319	NP_649920.2	383	CG8319
3R	NT_033777.3	9629061	9630765	-	41166	Calr	Dmel_CG9429	NP_524293.2	406	calreticulin, isoform A
3R	NT_033777.3	9629061	9630765	-	41166	Calr	Dmel_CG9429	NP_001262430.1	406	calreticulin, isoform B
3R	NT_033777.3	9631721	9633106	+	41167	SpdS	Dmel_CG8327	NP_731384.1	287	spermidine synthase, isoform A
3R	NT_033777.3	9631721	9633106	+	41167	SpdS	Dmel_CG8327	NP_001247005.1	287	spermidine synthase, isoform C
3R	NT_033777.3	9632453	9633106	+	41167	SpdS	Dmel_CG8327	NP_649921.1	217	spermidine synthase, isoform B
3R	NT_033777.3	9634338	9637155	-	41168	Scm	Dmel_CG9495	NP_001247006.1	877	Sex comb on midleg, isoform B
3R	NT_033777.3	9634338	9637155	-	41168	Scm	Dmel_CG9495	NP_731385.1	877	Sex comb on midleg, isoform A
3R	NT_033777.3	9643492	9649723	+	41170	Dh44	Dmel_CG8348	NP_649922.2	356	diuretic hormone 44, isoform A
3R	NT_033777.3	9643492	9649723	+	41170	Dh44	Dmel_CG8348	NP_001097725.2	356	diuretic hormone 44, isoform C
3R	NT_033777.3	9645267	9646127	-	41169	Fst	Dmel_CG9434	NP_524294.2	286	frost
3R	NT_033777.3	9651570	9674643	-	41171	CG9492	Dmel_CG9492	NP_001247008.1	4700	CG9492, isoform F
3R	NT_033777.3	9651570	9673817	-	41171	CG9492	Dmel_CG9492	NP_649923.4	4692	CG9492, isoform E
3R	NT_033777.3	9651570	9674643	-	41171	CG9492	Dmel_CG9492	NP_001287256.1	4724	CG9492, isoform G
3R	NT_033777.3	9651570	9673817	-	41171	CG9492	Dmel_CG9492	NP_001247007.1	4716	CG9492, isoform D
3R	NT_033777.3	9652847	9653128	-	12798078	CG43441	Dmel_CG43441	NP_001247009.1	93	uncharacterized protein Dmel_CG43441
3R	NT_033777.3	9675552	9677719	+	41172	CG8358	Dmel_CG8358	NP_649924.1	702	CG8358
3R	NT_033777.3	9678070	9679236	+	41173	CG16817	Dmel_CG16817	NP_649925.1	184	uncharacterized protein Dmel_CG16817, isoform A
3R	NT_033777.3	9678070	9679236	+	41173	CG16817	Dmel_CG16817	NP_001247010.1	184	uncharacterized protein Dmel_CG16817, isoform B
3R	NT_033777.3	9680081	9681416	+	41174	nmdyn-D7	Dmel_CG8362	NP_649926.2	387	nmdyn-D7
3R	NT_033777.3	9681522	9683983	-	41175	CG9444	Dmel_CG9444	NP_649927.2	557	CG9444, isoform A
3R	NT_033777.3	9681522	9683983	-	41175	CG9444	Dmel_CG9444	NP_001262431.1	557	CG9444, isoform B
3R	NT_033777.3	9684667	9685379	-	41177	eca	Dmel_CG33104	NP_788616.1	216	eclair
3R	NT_033777.3	9685849	9686717	+	41176	CG18542	Dmel_CG18542	NP_649928.1	249	uncharacterized protein Dmel_CG18542
3R	NT_033777.3	9687462	9691742	-	318890	p24-2	Dmel_CG33105	NP_731389.2	760	uncoordinated 115b, isoform D
3R	NT_033777.3	9687462	9691545	-	318890	p24-2	Dmel_CG33105	NP_001189204.1	768	uncoordinated 115b, isoform E
3R	NT_033777.3	9687462	9691545	-	318890	p24-2	Dmel_CG33105	NP_731391.1	768	uncoordinated 115b, isoform A
3R	NT_033777.3	9687462	9691545	-	318890	p24-2	Dmel_CG33105	NP_731392.2	749	uncoordinated 115b, isoform B
3R	NT_033777.3	9687462	9691545	-	318890	p24-2	Dmel_CG33105	NP_001303500.1	756	uncoordinated 115b, isoform F
3R	NT_033777.3	9687462	9691742	-	318890	p24-2	Dmel_CG33105	NP_731390.1	784	uncoordinated 115b, isoform C
3R	NT_033777.3	9691903	9692699	-	318890	p24-2	Dmel_CG33105	NP_788617.1	244	p24-related-2, isoform A
3R	NT_033777.3	9691903	9692699	-	318890	p24-2	Dmel_CG33105	NP_001189205.1	244	p24-related-2, isoform B
3R	NT_033777.3	9693169	9694037	+	318260	CG32939	Dmel_CG32939	NP_788618.1	249	uncharacterized protein Dmel_CG32939
3R	NT_033777.3	9695110	9704948	-	261629	Unc-115a	Dmel_CG31352	NP_649930.4	806	uncoordinated 115a, isoform A
3R	NT_033777.3	9695110	9704948	-	261629	Unc-115a	Dmel_CG31352	NP_001163575.2	813	uncoordinated 115a, isoform J
3R	NT_033777.3	9695110	9699628	-	261629	Unc-115a	Dmel_CG31352	NP_001163573.1	844	uncoordinated 115a, isoform B
3R	NT_033777.3	9695110	9704948	-	261629	Unc-115a	Dmel_CG31352	NP_001287260.1	772	uncoordinated 115a, isoform H
3R	NT_033777.3	9695110	9699628	-	261629	Unc-115a	Dmel_CG31352	NP_001163574.1	839	uncoordinated 115a, isoform C
3R	NT_033777.3	9695110	9699628	-	261629	Unc-115a	Dmel_CG31352	NP_001287258.1	825	uncoordinated 115a, isoform F
3R	NT_033777.3	9695110	9699431	-	261629	Unc-115a	Dmel_CG31352	NP_001287259.1	828	uncoordinated 115a, isoform G
3R	NT_033777.3	9695110	9704948	-	261629	Unc-115a	Dmel_CG31352	NP_001287257.1	787	uncoordinated 115a, isoform E
3R	NT_033777.3	9706748	9709515	-	41179	trbd	Dmel_CG9448	NP_649931.1	778	trabid
3R	NT_033777.3	9711210	9714127	+	41180	dmt	Dmel_CG8374	NP_524295.1	857	dalmatian
3R	NT_033777.3	9714952	9725525	-	41181	hyd	Dmel_CG9484	NP_524296.2	2885	hyperplastic discs, isoform A
3R	NT_033777.3	9714952	9725525	-	41181	hyd	Dmel_CG9484	NP_001287262.1	2887	hyperplastic discs, isoform B
3R	NT_033777.3	9726570	9729433	-	41182	FoxP	Dmel_CG43067	NP_001247011.1	520	forkhead box P, isoform C
3R	NT_033777.3	9727408	9729433	-	41182	FoxP	Dmel_CG43067	NP_001097726.1	442	forkhead box P, isoform D
3R	NT_033777.3	9727927	9729433	-	41182	FoxP	Dmel_CG43067	NP_001303501.1	393	forkhead box P, isoform E
3R	NT_033777.3	9731329	9733148	-	41183	alphaTub85E	Dmel_CG9476	NP_524297.1	449	alpha-Tubulin at 85E
3R	NT_033777.3	9734962	9739320	-	41184	CG12950	Dmel_CG12950	NP_001262432.1	939	uncharacterized protein Dmel_CG12950, isoform B
3R	NT_033777.3	9734962	9739320	-	41184	CG12950	Dmel_CG12950	NP_649933.1	939	uncharacterized protein Dmel_CG12950, isoform A
3R	NT_033777.3	9741009	9741976	+	41185	Pnn	Dmel_CG8383	NP_649934.1	303	pinin, isoform A
3R	NT_033777.3	9741009	9742219	+	41185	Pnn	Dmel_CG8383	NP_001097727.1	307	pinin, isoform B
3R	NT_033777.3	9743053	9745795	-	5740854	CG34409	Dmel_CG34409	NP_001097728.2	511	uncharacterized protein Dmel_CG34409
3R	NT_033777.3	9744076	9744549	+	318722	CG31415	Dmel_CG31415	NP_731395.1	157	uncharacterized protein Dmel_CG31415
3R	NT_033777.3	9746452	9747269	-	41187	CG12948	Dmel_CG12948	NP_001287263.1	252	uncharacterized protein Dmel_CG12948, isoform B
3R	NT_033777.3	9746452	9747269	-	41187	CG12948	Dmel_CG12948	NP_649936.1	252	uncharacterized protein Dmel_CG12948, isoform A
3R	NT_033777.3	9748218	9750344	+	49779	PpD3	Dmel_CG8402	NP_001262433.1	520	protein phosphatase D3, isoform C
3R	NT_033777.3	9748218	9750344	+	49779	PpD3	Dmel_CG8402	NP_524946.1	520	protein phosphatase D3, isoform A
3R	NT_033777.3	9748218	9750344	+	49779	PpD3	Dmel_CG8402	NP_731398.1	520	protein phosphatase D3, isoform B
3R	NT_033777.3	9751116	9754581	-	41189	CG16908	Dmel_CG16908	NP_649937.1	1080	uncharacterized protein Dmel_CG16908
3R	NT_033777.3	9754898	9756163	-	41190	Rpt3R	Dmel_CG9475	NP_649938.2	405	regulatory particle triple-A ATPase 3-related, isoform C
3R	NT_033777.3	9754898	9756163	-	41190	Rpt3R	Dmel_CG9475	NP_731401.3	405	regulatory particle triple-A ATPase 3-related, isoform D
3R	NT_033777.3	9756879	9759211	+	41191	CG8412	Dmel_CG8412	NP_649939.1	678	CG8412
3R	NT_033777.3	9759902	9761145	+	41192	CG8417	Dmel_CG8417	NP_649940.1	396	CG8417
3R	NT_033777.3	9762211	9762849	-	41193	Snap24	Dmel_CG9474	NP_524298.1	212	Synaptosomal-associated protein 24kDa
3R	NT_033777.3	9763903	9765838	+	41194	CG8478	Dmel_CG8478	NP_001163576.1	576	CG8478, isoform D
3R	NT_033777.3	9763903	9765838	+	41194	CG8478	Dmel_CG8478	NP_001262434.1	571	CG8478, isoform E
3R	NT_033777.3	9763903	9765838	+	41194	CG8478	Dmel_CG8478	NP_731402.3	572	CG8478, isoform C
3R	NT_033777.3	9763903	9765838	+	41194	CG8478	Dmel_CG8478	NP_649941.3	571	CG8478, isoform B
3R	NT_033777.3	9766441	9767358	-	44728	MED6	Dmel_CG9473	NP_001163578.1	249	mediator complex subunit 6, isoform D
3R	NT_033777.3	9766441	9767358	-	44728	MED6	Dmel_CG9473	NP_731403.2	249	mediator complex subunit 6, isoform B
3R	NT_033777.3	9766441	9767358	-	44728	MED6	Dmel_CG9473	NP_001163577.1	249	mediator complex subunit 6, isoform C
3R	NT_033777.3	9766441	9767358	-	44728	MED6	Dmel_CG9473	NP_651988.2	249	mediator complex subunit 6, isoform A
3R	NT_033777.3	9766441	9767358	-	44728	MED6	Dmel_CG9473	NP_001287264.1	249	mediator complex subunit 6, isoform E
3R	NT_033777.3	9768138	9769426	+	41195	CG8481	Dmel_CG8481	NP_649942.1	168	CG8481, isoform A
3R	NT_033777.3	9768806	9769426	+	41195	CG8481	Dmel_CG8481	NP_001014612.1	178	CG8481, isoform B
3R	NT_033777.3	9770699	9771368	-	41197	CG9471	Dmel_CG9471	NP_649943.2	204	CG9471, isoform A
3R	NT_033777.3	9770699	9771368	-	41197	CG9471	Dmel_CG9471	NP_001097729.1	204	CG9471, isoform B
3R	NT_033777.3	9771973	9773974	-	41198	Whamy	Dmel_CG12946	NP_001262437.1	596	WHAMM and JMY related, isoform E
3R	NT_033777.3	9771973	9773626	-	41198	Whamy	Dmel_CG12946	NP_649944.1	514	WHAMM and JMY related, isoform A
3R	NT_033777.3	9771973	9773974	-	41198	Whamy	Dmel_CG12946	NP_001036699.1	630	WHAMM and JMY related, isoform B
3R	NT_033777.3	9771973	9773974	-	41198	Whamy	Dmel_CG12946	NP_001262436.1	596	WHAMM and JMY related, isoform D
3R	NT_033777.3	9771973	9773626	-	41198	Whamy	Dmel_CG12946	NP_001262435.1	514	WHAMM and JMY related, isoform C
3R	NT_033777.3	9775284	9777899	+	41199	topi	Dmel_CG8484	NP_649945.1	814	matotopetli
3R	NT_033777.3	9778135	9778785	+	41200	RpS29	Dmel_CG8495	NP_731407.2	56	ribosomal protein S29, isoform B
3R	NT_033777.3	9778135	9778785	+	41200	RpS29	Dmel_CG8495	NP_649946.1	56	ribosomal protein S29, isoform A
3R	NT_033777.3	9780187	9782757	+	41201	CG12947	Dmel_CG12947	NP_001097731.1	424	uncharacterized protein Dmel_CG12947
3R	NT_033777.3	9783859	9784245	-	41202	MtnA	Dmel_CG9470	NP_001262438.1	40	metallothionein A, isoform B
3R	NT_033777.3	9783859	9784245	-	41202	MtnA	Dmel_CG9470	NP_524299.1	40	metallothionein A, isoform A
3R	NT_033777.3	9785907	9786857	+	41203	CG8500	Dmel_CG8500	NP_001303452.1	233	CG8500, isoform B
3R	NT_033777.3	9785907	9786857	+	41203	CG8500	Dmel_CG8500	NP_649948.1	233	CG8500, isoform A
3R	NT_033777.3	9789430	9791090	-	41204	CG12945	Dmel_CG12945	NP_001097732.1	449	uncharacterized protein Dmel_CG12945, isoform B
3R	NT_033777.3	9789430	9791090	-	41204	CG12945	Dmel_CG12945	NP_001262439.1	440	uncharacterized protein Dmel_CG12945, isoform C
3R	NT_033777.3	9789430	9791090	-	41204	CG12945	Dmel_CG12945	NP_001303482.1	449	uncharacterized protein Dmel_CG12945, isoform D
3R	NT_033777.3	9791570	9792941	+	41205	CG8507	Dmel_CG8507	NP_649950.1	379	CG8507
3R	NT_033777.3	9793452	9797003	+	41206	CG8516	Dmel_CG8516	NP_649951.1	868	CG8516
3R	NT_033777.3	9798460	9800730	-	41207	CG9467	Dmel_CG9467	NP_649952.1	730	CG9467
3R	NT_033777.3	9801480	9803410	+	41208	CG8526	Dmel_CG8526	NP_001262440.1	604	CG8526, isoform B
3R	NT_033777.3	9801480	9803410	+	41208	CG8526	Dmel_CG8526	NP_649953.1	605	CG8526, isoform A
3R	NT_033777.3	9804889	9808682	-	41209	FBXO11	Dmel_CG9461	NP_001262441.1	1182	F-box protein 11, isoform B
3R	NT_033777.3	9804889	9808682	-	41209	FBXO11	Dmel_CG9461	NP_649954.1	1182	F-box protein 11, isoform A
3R	NT_033777.3	9812805	9813805	+	41210	CG8534	Dmel_CG8534	NP_649955.1	265	CG8534
3R	NT_033777.3	9814182	9815020	+	41211	eloF	Dmel_CG16905	NP_649956.1	257	elongase F
3R	NT_033777.3	9816097	9816957	-	41212	CG16904	Dmel_CG16904	NP_649957.1	262	uncharacterized protein Dmel_CG16904
3R	NT_033777.3	9817502	9818366	-	41213	CG9459	Dmel_CG9459	NP_649958.2	265	CG9459
3R	NT_033777.3	9819009	9819867	-	41214	CG9458	Dmel_CG9458	NP_731419.1	264	CG9458
3R	NT_033777.3	9820629	9821102	-	10178851	CG42857	Dmel_CG42857	NP_001189206.1	138	uncharacterized protein Dmel_CG42857
3R	NT_033777.3	9823099	9823611	-	5740537	CG34302	Dmel_CG34302	NP_001097733.2	170	uncharacterized protein Dmel_CG34302
3R	NT_033777.3	9828666	9865738	-	41215	Teh1	Dmel_CG12806	NP_001262442.1	299	tipE homolog 1, isoform B
3R	NT_033777.3	9828726	9865738	-	41215	Teh1	Dmel_CG12806	NP_649959.1	279	tipE homolog 1, isoform A
3R	NT_033777.3	9875675	9943652	+	41217	Glut4EF	Dmel_CG34360	NP_001138029.1	300	glucose transporter 4 enhancer factor, isoform C
3R	NT_033777.3	9875675	9953802	+	41217	Glut4EF	Dmel_CG34360	NP_001138030.1	361	glucose transporter 4 enhancer factor, isoform D
3R	NT_033777.3	9875675	9987788	+	41217	Glut4EF	Dmel_CG34360	NP_001097734.1	741	glucose transporter 4 enhancer factor, isoform A
3R	NT_033777.3	9875675	9988415	+	41217	Glut4EF	Dmel_CG34360	NP_001262443.1	950	glucose transporter 4 enhancer factor, isoform G
3R	NT_033777.3	9875675	9987788	+	41217	Glut4EF	Dmel_CG34360	NP_001262444.1	741	glucose transporter 4 enhancer factor, isoform H
3R	NT_033777.3	9930475	9987788	+	41217	Glut4EF	Dmel_CG34360	NP_001034041.1	521	glucose transporter 4 enhancer factor, isoform B
3R	NT_033777.3	9930475	9943912	+	41217	Glut4EF	Dmel_CG34360	NP_001138031.1	137	glucose transporter 4 enhancer factor, isoform E
3R	NT_033777.3	9930475	9987788	+	41217	Glut4EF	Dmel_CG34360	NP_001247012.1	521	glucose transporter 4 enhancer factor, isoform F
3R	NT_033777.3	9983913	9985679	-	41219	Art4	Dmel_CG5358	NP_649963.1	530	arginine methyltransferase 4, isoform A
3R	NT_033777.3	9983913	9985679	-	41219	Art4	Dmel_CG5358	NP_001262445.1	530	arginine methyltransferase 4, isoform B
3R	NT_033777.3	9995544	9996789	-	117475	Gr85a	Dmel_CG31405	NP_731426.1	397	gustatory receptor 85a
3R	NT_033777.3	9997539	10000314	+	41221	Spn85F	Dmel_CG12807	NP_649965.2	640	serpin 85F
3R	NT_033777.3	10000622	10001201	-	41222	CG5359	Dmel_CG5359	NP_001247013.1	173	CG5359, isoform C
3R	NT_033777.3	10000622	10001201	-	41222	CG5359	Dmel_CG5359	NP_649966.1	173	CG5359, isoform A
3R	NT_033777.3	10000622	10001201	-	41222	CG5359	Dmel_CG5359	NP_001163579.1	173	CG5359, isoform B
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_001247014.1	4732	molecule interacting with CasL, isoform K
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788625.1	4723	molecule interacting with CasL, isoform G
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_001303503.1	2991	molecule interacting with CasL, isoform Q
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788622.1	4723	molecule interacting with CasL, isoform C
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788623.1	4723	molecule interacting with CasL, isoform D
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_001303502.1	4689	molecule interacting with CasL, isoform P
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788624.1	4723	molecule interacting with CasL, isoform F
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_001247015.1	4743	molecule interacting with CasL, isoform L
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788620.1	2734	molecule interacting with CasL, isoform E
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788626.2	4700	molecule interacting with CasL, isoform O
3R	NT_033777.3	10002435	10021382	-	41225	Mical	Dmel_CG33208	NP_788621.1	3002	molecule interacting with CasL, isoform B
3R	NT_033777.3	10009622	10021382	-	41225	Mical	Dmel_CG33208	NP_001247016.2	3029	molecule interacting with CasL, isoform N
3R	NT_033777.3	10018431	10021382	-	41225	Mical	Dmel_CG33208	NP_788627.1	810	molecule interacting with CasL, isoform A
3R	NT_033777.3	10018877	10021382	-	41225	Mical	Dmel_CG33208	NP_001138032.1	789	molecule interacting with CasL, isoform I
3R	NT_033777.3	10022957	10023427	-	318716	CG31407	Dmel_CG31407	NP_731435.1	156	uncharacterized protein Dmel_CG31407, isoform A
3R	NT_033777.3	10022957	10023427	-	318716	CG31407	Dmel_CG31407	NP_001287265.1	156	uncharacterized protein Dmel_CG31407, isoform B
3R	NT_033777.3	10043347	10044577	+	41226	CG3909	Dmel_CG3909	NP_649969.1	331	CG3909
3R	NT_033777.3	10044627	10045415	-	41227	CG11722	Dmel_CG11722	NP_649970.1	203	uncharacterized protein Dmel_CG11722
3R	NT_033777.3	10045669	10047202	+	41228	mtTFB2	Dmel_CG3910	NP_649971.1	452	mitochondrial transcription factor B2
3R	NT_033777.3	10047381	10048536	-	41229	CG12811	Dmel_CG12811	NP_649972.1	203	uncharacterized protein Dmel_CG12811
3R	NT_033777.3	10049296	10051321	+	41230	CG3925	Dmel_CG3925	NP_649973.1	585	CG3925
3R	NT_033777.3	10051547	10052806	-	41231	Fancl	Dmel_CG12812	NP_649974.1	381	fancl, isoform A
3R	NT_033777.3	10051547	10052806	-	41231	Fancl	Dmel_CG12812	NP_001287266.1	380	fancl, isoform B
3R	NT_033777.3	10053398	10054260	+	326136	Npc2e	Dmel_CG31410	NP_731439.2	168	Niemann-Pick type C-2e
3R	NT_033777.3	10055491	10056079	-	41232	Npc2d	Dmel_CG12813	NP_649975.1	173	Niemann-Pick type C-2d
3R	NT_033777.3	10060297	10060971	+	41233	Npc2c	Dmel_CG3934	NP_649976.1	165	Niemann-Pick type C-2c
3R	NT_033777.3	10062624	10063327	+	3772504	CG33630	Dmel_CG33630	NP_001027166.1	212	uncharacterized protein Dmel_CG33630
3R	NT_033777.3	10064007	10064645	+	3771784	CG33631	Dmel_CG33631	NP_001027167.1	195	uncharacterized protein Dmel_CG33631
3R	NT_033777.3	10066770	10067567	+	3771958	CG33783	Dmel_CG33783	NP_001027168.1	164	uncharacterized protein Dmel_CG33783
3R	NT_033777.3	10067905	10068572	+	3772181	CG33784	Dmel_CG33784	NP_001027169.1	183	uncharacterized protein Dmel_CG33784
3R	NT_033777.3	10071175	10073693	+	41235	nerfin-2	Dmel_CG12809	NP_001262446.1	775	nervous fingers 2, isoform B
3R	NT_033777.3	10071175	10073453	+	41235	nerfin-2	Dmel_CG12809	NP_524300.1	695	nervous fingers 2, isoform A
3R	NT_033777.3	10073860	10075366	-	41236	CG5361	Dmel_CG5361	NP_649978.2	479	CG5361
3R	NT_033777.3	10103232	10106100	-	37528	Fmr1	Dmel_CG6203	NP_731445.1	643	Fmr1, isoform E
3R	NT_033777.3	10103232	10108745	-	37528	Fmr1	Dmel_CG6203	NP_001303443.1	681	Fmr1, isoform J
3R	NT_033777.3	10103232	10108745	-	37528	Fmr1	Dmel_CG6203	NP_611645.1	684	Fmr1, isoform A
3R	NT_033777.3	10103232	10106100	-	37528	Fmr1	Dmel_CG6203	NP_001262448.1	639	Fmr1, isoform I
3R	NT_033777.3	10103232	10108745	-	37528	Fmr1	Dmel_CG6203	NP_731444.1	681	Fmr1, isoform D
3R	NT_033777.3	10103232	10106100	-	37528	Fmr1	Dmel_CG6203	NP_001163580.1	646	Fmr1, isoform F
3R	NT_033777.3	10103232	10108745	-	37528	Fmr1	Dmel_CG6203	NP_001303444.1	681	Fmr1, isoform K
3R	NT_033777.3	10103232	10108745	-	37528	Fmr1	Dmel_CG6203	NP_731443.1	681	Fmr1, isoform C
3R	NT_033777.3	10103232	10108889	-	37528	Fmr1	Dmel_CG6203	NP_001247017.1	729	Fmr1, isoform G
3R	NT_033777.3	10104208	10108745	-	37528	Fmr1	Dmel_CG6203	NP_731446.1	529	Fmr1, isoform B
3R	NT_033777.3	10104208	10108889	-	37528	Fmr1	Dmel_CG6203	NP_001262447.1	577	Fmr1, isoform H
3R	NT_033777.3	10112786	10119169	+	41238	CG3940	Dmel_CG3940	NP_001287268.1	304	CG3940, isoform C
3R	NT_033777.3	10112786	10119169	+	41238	CG3940	Dmel_CG3940	NP_649979.1	304	CG3940, isoform A
3R	NT_033777.3	10112786	10119169	+	41238	CG3940	Dmel_CG3940	NP_001287267.1	304	CG3940, isoform B
3R	NT_033777.3	10120523	10121374	-	41239	gammaSnap2	Dmel_CG6208	NP_649980.1	283	gamma soluble NSF attachment protein 2
3R	NT_033777.3	10122026	10122220	+	326144	ATPsynepsilonL	Dmel_CG31477	NP_001097736.1	64	ATP synthase, epsilon subunit-like, isoform B
3R	NT_033777.3	10122026	10122220	+	326144	ATPsynepsilonL	Dmel_CG31477	NP_731449.1	64	ATP synthase, epsilon subunit-like, isoform A
3R	NT_033777.3	10122026	10122220	+	326144	ATPsynepsilonL	Dmel_CG31477	NP_001262449.1	64	ATP synthase, epsilon subunit-like, isoform C
3R	NT_033777.3	10122524	10125219	-	47137	knk	Dmel_CG6217	NP_649981.1	689	knickkopf
3R	NT_033777.3	10128147	10134993	-	47877	tws	Dmel_CG6235	NP_001287269.1	499	twins, isoform I
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_599111.1	443	twins, isoform D
3R	NT_033777.3	10128147	10134993	-	47877	tws	Dmel_CG6235	NP_476880.1	499	twins, isoform A
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_731453.1	443	twins, isoform H
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_476881.1	443	twins, isoform E
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_599113.1	443	twins, isoform B
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_731452.1	443	twins, isoform G
3R	NT_033777.3	10128147	10134993	-	47877	tws	Dmel_CG6235	NP_731451.1	499	twins, isoform F
3R	NT_033777.3	10128147	10133221	-	47877	tws	Dmel_CG6235	NP_599112.1	443	twins, isoform C
3R	NT_033777.3	10140770	10144071	-	41242	TAF1B	Dmel_CG6241	NP_649982.1	872	TATA box-binding protein-associated factor RNA polymerase I subunit B, isoform A
3R	NT_033777.3	10140770	10144071	-	41242	TAF1B	Dmel_CG6241	NP_001262451.1	872	TATA box-binding protein-associated factor RNA polymerase I subunit B, isoform C
3R	NT_033777.3	10140770	10142850	-	41242	TAF1B	Dmel_CG6241	NP_001262450.1	661	TATA box-binding protein-associated factor RNA polymerase I subunit B, isoform B
3R	NT_033777.3	10143087	10143354	+	10178930	CG42759	Dmel_CG42759	NP_001189207.1	70	uncharacterized protein Dmel_CG42759
3R	NT_033777.3	10145401	10158309	+	49580	Invadolysin	Dmel_CG3953	NP_652072.1	683	invadolysin
3R	NT_033777.3	10151153	10151697	-	5740723	CG34303	Dmel_CG34303	NP_001097737.1	139	uncharacterized protein Dmel_CG34303
3R	NT_033777.3	10159175	10161261	-	41244	CG6254	Dmel_CG6254	NP_649983.2	634	CG6254
3R	NT_033777.3	10161985	10167319	-	53431	Best1	Dmel_CG6264	NP_001262452.1	736	bestrophin 1, isoform D
3R	NT_033777.3	10161985	10167319	-	53431	Best1	Dmel_CG6264	NP_001138033.1	769	bestrophin 1, isoform B
3R	NT_033777.3	10161985	10167319	-	53431	Best1	Dmel_CG6264	NP_652603.1	721	bestrophin 1, isoform A
3R	NT_033777.3	10161985	10167319	-	53431	Best1	Dmel_CG6264	NP_001247018.1	784	bestrophin 1, isoform C
3R	NT_033777.3	10171627	10188020	-	41246	CG12814	Dmel_CG12814	NP_649984.3	436	uncharacterized protein Dmel_CG12814, isoform C
3R	NT_033777.3	10171627	10188020	-	41246	CG12814	Dmel_CG12814	NP_001262454.1	441	uncharacterized protein Dmel_CG12814, isoform E
3R	NT_033777.3	10172267	10188020	-	41246	CG12814	Dmel_CG12814	NP_001036700.1	408	uncharacterized protein Dmel_CG12814, isoform B
3R	NT_033777.3	10172267	10188020	-	41246	CG12814	Dmel_CG12814	NP_001262453.1	403	uncharacterized protein Dmel_CG12814, isoform D
3R	NT_033777.3	10195369	10220143	+	41247	Syn	Dmel_CG3985	NP_731459.2	1041	synapsin, isoform D
3R	NT_033777.3	10195369	10217724	+	41247	Syn	Dmel_CG3985	NP_731458.2	597	synapsin, isoform E
3R	NT_033777.3	10195837	10217724	+	41247	Syn	Dmel_CG3985	NP_731457.2	537	synapsin, isoform A
3R	NT_033777.3	10195837	10220143	+	41247	Syn	Dmel_CG3985	NP_788628.2	981	synapsin, isoform F
3R	NT_033777.3	10204514	10205382	-	41248	Timp	Dmel_CG6281	NP_731461.1	210	tissue inhibitor of metalloproteases
3R	NT_033777.3	10222758	10223673	+	41249	CG12420	Dmel_CG12420	NP_649985.1	240	uncharacterized protein Dmel_CG12420
3R	NT_033777.3	10223915	10224656	-	41250	CG12817	Dmel_CG12817	NP_001036701.1	171	uncharacterized protein Dmel_CG12817
3R	NT_033777.3	10224966	10225378	+	4379852	CG34107	Dmel_CG34107	NP_001036703.1	114	uncharacterized protein Dmel_CG34107
3R	NT_033777.3	10225754	10249971	+	41252	CG42795	Dmel_CG42795	NP_001287272.1	3213	uncharacterized protein Dmel_CG42795, isoform G
3R	NT_033777.3	10225754	10251074	+	41252	CG42795	Dmel_CG42795	NP_001287271.1	2928	uncharacterized protein Dmel_CG42795, isoform F
3R	NT_033777.3	10225754	10249971	+	41252	CG42795	Dmel_CG42795	NP_001287270.1	3190	uncharacterized protein Dmel_CG42795, isoform E
3R	NT_033777.3	10225754	10251074	+	41252	CG42795	Dmel_CG42795	NP_001262455.1	2904	uncharacterized protein Dmel_CG42795, isoform C
3R	NT_033777.3	10225754	10249971	+	41252	CG42795	Dmel_CG42795	NP_001189208.1	3189	uncharacterized protein Dmel_CG42795, isoform A
3R	NT_033777.3	10239635	10249971	+	41252	CG42795	Dmel_CG42795	NP_649988.2	3068	uncharacterized protein Dmel_CG42795, isoform B
3R	NT_033777.3	10251580	10255091	+	41253	CG3999	Dmel_CG3999	NP_001262456.1	985	CG3999, isoform B
3R	NT_033777.3	10251580	10255091	+	41253	CG3999	Dmel_CG3999	NP_649989.1	985	CG3999, isoform A
3R	NT_033777.3	10255376	10261740	-	41254	Sirt6	Dmel_CG6284	NP_649990.2	325	sirtuin 6
3R	NT_033777.3	10262343	10263831	+	53439	pont	Dmel_CG4003	NP_652608.1	456	pontin
3R	NT_033777.3	10291247	10299793	+	41256	CG43143	Dmel_CG43143	NP_996192.1	1427	uncharacterized protein Dmel_CG43143, isoform C
3R	NT_033777.3	10291247	10299793	+	41256	CG43143	Dmel_CG43143	NP_649991.2	1427	uncharacterized protein Dmel_CG43143, isoform A
3R	NT_033777.3	10291247	10302299	+	41256	CG43143	Dmel_CG43143	NP_001247019.1	1532	uncharacterized protein Dmel_CG43143, isoform F
3R	NT_033777.3	10291247	10307477	+	41256	CG43143	Dmel_CG43143	NP_001262458.1	2556	uncharacterized protein Dmel_CG43143, isoform I
3R	NT_033777.3	10291247	10299793	+	41256	CG43143	Dmel_CG43143	NP_001247020.1	1199	uncharacterized protein Dmel_CG43143, isoform G
3R	NT_033777.3	10291247	10299793	+	41256	CG43143	Dmel_CG43143	NP_731469.2	1427	uncharacterized protein Dmel_CG43143, isoform B
3R	NT_033777.3	10291247	10302299	+	41256	CG43143	Dmel_CG43143	NP_001262457.1	1551	uncharacterized protein Dmel_CG43143, isoform H
3R	NT_033777.3	10291247	10299793	+	41256	CG43143	Dmel_CG43143	NP_996191.1	1180	uncharacterized protein Dmel_CG43143, isoform D
3R	NT_033777.3	10291247	10307477	+	41256	CG43143	Dmel_CG43143	NP_649993.2	2537	uncharacterized protein Dmel_CG43143, isoform E
3R	NT_033777.3	10308566	10311494	-	41259	CG6293	Dmel_CG6293	NP_001262459.1	573	CG6293, isoform B
3R	NT_033777.3	10308566	10311494	-	41259	CG6293	Dmel_CG6293	NP_649994.1	573	CG6293, isoform A
3R	NT_033777.3	10312644	10331187	-	41260	Bruce	Dmel_CG6303	NP_001262463.1	4865	BIR repeat containing ubiquitin-conjugating enzyme, isoform E
3R	NT_033777.3	10312644	10331187	-	41260	Bruce	Dmel_CG6303	NP_001262462.1	4875	BIR repeat containing ubiquitin-conjugating enzyme, isoform D
3R	NT_033777.3	10312644	10331187	-	41260	Bruce	Dmel_CG6303	NP_649995.2	4876	BIR repeat containing ubiquitin-conjugating enzyme, isoform A
3R	NT_033777.3	10312644	10331187	-	41260	Bruce	Dmel_CG6303	NP_001262460.1	4976	BIR repeat containing ubiquitin-conjugating enzyme, isoform B
3R	NT_033777.3	10312644	10331187	-	41260	Bruce	Dmel_CG6303	NP_001262461.1	4852	BIR repeat containing ubiquitin-conjugating enzyme, isoform C
3R	NT_033777.3	10331619	10332599	+	41261	CG12818	Dmel_CG12818	NP_649996.1	288	uncharacterized protein Dmel_CG12818
3R	NT_033777.3	10333277	10337945	+	41262	sle	Dmel_CG12819	NP_731472.1	1430	slender lobes, isoform B
3R	NT_033777.3	10333490	10337945	+	41262	sle	Dmel_CG12819	NP_731473.1	1420	slender lobes, isoform A
3R	NT_033777.3	10338403	10340551	+	41263	CG12592	Dmel_CG12592	NP_731474.1	674	uncharacterized protein Dmel_CG12592
3R	NT_033777.3	10340959	10341618	+	41264	CG18545	Dmel_CG18545	NP_649998.2	199	uncharacterized protein Dmel_CG18545
3R	NT_033777.3	10348920	10349909	+	318715	CG31406	Dmel_CG31406	NP_731477.1	148	uncharacterized protein Dmel_CG31406, isoform A
3R	NT_033777.3	10348920	10349909	+	318715	CG31406	Dmel_CG31406	NP_731476.1	249	uncharacterized protein Dmel_CG31406, isoform B
3R	NT_033777.3	10350528	10360258	+	41265	jumu	Dmel_CG4029	NP_524302.1	719	jumeau
3R	NT_033777.3	10363163	10372986	-	41266	Rfx	Dmel_CG6312	NP_649999.2	897	Rfx, isoform J
3R	NT_033777.3	10363163	10367202	-	41266	Rfx	Dmel_CG6312	NP_001262464.1	882	Rfx, isoform F
3R	NT_033777.3	10363163	10372986	-	41266	Rfx	Dmel_CG6312	NP_001097738.2	889	Rfx, isoform I
3R	NT_033777.3	10363163	10372986	-	41266	Rfx	Dmel_CG6312	NP_001247021.1	911	Rfx, isoform C
3R	NT_033777.3	10363163	10367202	-	41266	Rfx	Dmel_CG6312	NP_001247022.2	860	Rfx, isoform G
3R	NT_033777.3	10363163	10372986	-	41266	Rfx	Dmel_CG6312	NP_001247023.2	919	Rfx, isoform H
3R	NT_033777.3	10389379	10399338	+	44669	cwo	Dmel_CG17100	NP_524775.1	698	clockwork orange, isoform A
3R	NT_033777.3	10397411	10399338	+	44669	cwo	Dmel_CG17100	NP_001247024.1	621	clockwork orange, isoform B
3R	NT_033777.3	10397411	10399338	+	44669	cwo	Dmel_CG17100	NP_001247025.1	621	clockwork orange, isoform C
3R	NT_033777.3	10401051	10402954	+	117467	mthl11	Dmel_CG31147	NP_001262465.1	515	methuselah-like 11, isoform D
3R	NT_033777.3	10401051	10402954	+	117467	mthl11	Dmel_CG31147	NP_731479.3	532	methuselah-like 11, isoform C
3R	NT_033777.3	10403648	10407017	-	41268	CG6325	Dmel_CG6325	NP_650000.1	892	CG6325
3R	NT_033777.3	10408765	10412815	-	41269	Irp-1B	Dmel_CG6342	NP_524303.2	899	iron regulatory protein 1B
3R	NT_033777.3	10413373	10414197	+	41270	Rrp46	Dmel_CG4043	NP_650001.2	233	Rrp46
3R	NT_033777.3	10414233	10415984	-	41271	CG6345	Dmel_CG6345	NP_650002.1	583	CG6345
3R	NT_033777.3	10428253	10428303	-	26067073	CG46270	Dmel_CG46270	NP_001303504.1	16	uncharacterized protein Dmel_CG46270
3R	NT_033777.3	10434800	10436663	+	41272	Cyp12e1	Dmel_CG14680	NP_650003.4	522	Cyp12e1
3R	NT_033777.3	10511377	10612999	-	41273	hth	Dmel_CG17117	NP_476578.3	472	homothorax, isoform A
3R	NT_033777.3	10511377	10612999	-	41273	hth	Dmel_CG17117	NP_476576.1	487	homothorax, isoform C
3R	NT_033777.3	10583799	10612999	-	41273	hth	Dmel_CG17117	NP_001014613.2	266	homothorax, isoform E
3R	NT_033777.3	10585668	10612999	-	41273	hth	Dmel_CG17117	NP_476577.3	266	homothorax, isoform I
3R	NT_033777.3	10585668	10612999	-	41273	hth	Dmel_CG17117	NP_001027170.1	266	homothorax, isoform F
3R	NT_033777.3	10675640	10677160	-	41274	CG6465	Dmel_CG6465	NP_650004.1	401	CG6465
3R	NT_033777.3	10677887	10680777	-	41275	CG14688	Dmel_CG14688	NP_001097740.1	288	uncharacterized protein Dmel_CG14688
3R	NT_033777.3	10687242	10690547	+	3772559	Skeletor	Dmel_CG43161	NP_001027172.1	289	skeletor, isoform B
3R	NT_033777.3	10687242	10696046	+	3772559	Skeletor	Dmel_CG43161	NP_001247027.1	1503	skeletor, isoform E
3R	NT_033777.3	10687242	10694019	+	3772559	Skeletor	Dmel_CG43161	NP_001027171.1	784	skeletor, isoform C
3R	NT_033777.3	10693908	10696046	+	3772559	Skeletor	Dmel_CG43161	NP_001027173.2	712	skeletor, isoform D
3R	NT_033777.3	10696732	10703148	+	41279	pug	Dmel_CG4067	NP_001014614.1	968	pugilist, isoform D
3R	NT_033777.3	10696732	10703148	+	41279	pug	Dmel_CG4067	NP_731489.2	968	pugilist, isoform B
3R	NT_033777.3	10697207	10703148	+	41279	pug	Dmel_CG4067	NP_001247028.1	965	pugilist, isoform E
3R	NT_033777.3	10697874	10698944	+	41278	CG14683	Dmel_CG14683	NP_788632.1	356	uncharacterized protein Dmel_CG14683
3R	NT_033777.3	10699782	10703148	+	41279	pug	Dmel_CG4067	NP_731490.1	934	pugilist, isoform C
3R	NT_033777.3	10699782	10703148	+	41279	pug	Dmel_CG4067	NP_477254.1	934	pugilist, isoform A
3R	NT_033777.3	10703547	10704989	-	41280	CG31391	Dmel_CG31391	NP_731491.2	480	uncharacterized protein Dmel_CG31391
3R	NT_033777.3	10705292	10706734	-	318751	CG31467	Dmel_CG31467	NP_731492.1	480	uncharacterized protein Dmel_CG31467
3R	NT_033777.3	10707003	10707383	+	41281	CG14684	Dmel_CG14684	NP_650007.1	126	uncharacterized protein Dmel_CG14684
3R	NT_033777.3	10707475	10708262	-	41282	CG31278	Dmel_CG31278	NP_731494.1	238	uncharacterized protein Dmel_CG31278, isoform A
3R	NT_033777.3	10707765	10708262	-	41282	CG31278	Dmel_CG31278	NP_001287273.1	145	uncharacterized protein Dmel_CG31278, isoform B
3R	NT_033777.3	10708587	10709334	-	318700	CG31373	Dmel_CG31373	NP_731495.1	196	uncharacterized protein Dmel_CG31373
3R	NT_033777.3	10709676	10711139	-	41283	CG14689	Dmel_CG14689	NP_650009.1	487	uncharacterized protein Dmel_CG14689
3R	NT_033777.3	10714931	10715812	+	41284	CG4073	Dmel_CG4073	NP_650010.1	293	CG4073
3R	NT_033777.3	10735409	10735852	-	41285	tomboy20	Dmel_CG14690	NP_650011.1	147	tomboy20
3R	NT_033777.3	10738198	10750279	-	41286	TkR86C	Dmel_CG6515	NP_001097741.1	555	Tachykinin-like receptor at 86C, isoform B
3R	NT_033777.3	10738198	10750279	-	41286	TkR86C	Dmel_CG6515	NP_524304.2	504	Tachykinin-like receptor at 86C, isoform A
3R	NT_033777.3	10753398	10755562	-	41287	CG14691	Dmel_CG14691	NP_788633.1	510	uncharacterized protein Dmel_CG14691, isoform B
3R	NT_033777.3	10753398	10755562	-	41287	CG14691	Dmel_CG14691	NP_650012.2	522	uncharacterized protein Dmel_CG14691, isoform A
3R	NT_033777.3	10754140	10755562	-	41287	CG14691	Dmel_CG14691	NP_001262466.1	373	uncharacterized protein Dmel_CG14691, isoform C
3R	NT_033777.3	10756497	10759189	-	326130	CG31272	Dmel_CG31272	NP_650013.3	563	uncharacterized protein Dmel_CG31272
3R	NT_033777.3	10760210	10760933	-	41288	MED7	Dmel_CG31390	NP_731500.1	220	mediator complex subunit 7
3R	NT_033777.3	10761583	10765897	+	41289	Cap-H2	Dmel_CG14685	NP_731502.2	947	chromosome associated protein H2, isoform F
3R	NT_033777.3	10761583	10765897	+	41289	Cap-H2	Dmel_CG14685	NP_731503.2	959	chromosome associated protein H2, isoform G
3R	NT_033777.3	10761583	10765897	+	41289	Cap-H2	Dmel_CG14685	NP_650014.2	960	chromosome associated protein H2, isoform E
3R	NT_033777.3	10763144	10766495	+	41289	Cap-H2	Dmel_CG14685	NP_996193.1	699	chromosome associated protein H2, isoform D
3R	NT_033777.3	10766801	10767699	-	41290	TfIIFbeta	Dmel_CG6538	NP_524305.2	277	transcription factor TFIIFbeta
3R	NT_033777.3	10768217	10777251	-	19834760	CG45076	Dmel_CG45076	NP_001287275.1	619	uncharacterized protein Dmel_CG45076, isoform H
3R	NT_033777.3	10768217	10777251	-	19834760	CG45076	Dmel_CG45076	NP_650015.3	619	uncharacterized protein Dmel_CG45076, isoform A
3R	NT_033777.3	10770407	10777251	-	19834760	CG45076	Dmel_CG45076	NP_001287274.1	343	uncharacterized protein Dmel_CG45076, isoform E
3R	NT_033777.3	10770407	10777251	-	19834760	CG45076	Dmel_CG45076	NP_001287276.1	343	uncharacterized protein Dmel_CG45076, isoform I
3R	NT_033777.3	10773698	10777251	-	19836061	CG45078	Dmel_CG45078	NP_731505.1	131	fau
3R	NT_033777.3	10774649	10777251	-	19836061	CG45078	Dmel_CG45078	NP_731506.1	163	uncharacterized protein Dmel_CG45078
3R	NT_033777.3	10779692	10780729	+	41292	Desi	Dmel_CG14686	NP_650016.1	261	desiccate
3R	NT_033777.3	10780966	10782267	-	8674052	CG42633	Dmel_CG42633	NP_001163583.1	374	uncharacterized protein Dmel_CG42633
3R	NT_033777.3	10782609	10784009	-	41293	mRpL37	Dmel_CG42632	NP_524306.3	408	mitochondrial ribosomal protein L37
3R	NT_033777.3	10784607	10785520	+	41294	Rbp1	Dmel_CG17136	NP_731510.1	144	RNA-binding protein 1, isoform D
3R	NT_033777.3	10784607	10786248	+	41294	Rbp1	Dmel_CG17136	NP_524307.1	135	RNA-binding protein 1, isoform A
3R	NT_033777.3	10786766	10788114	-	41295	Art1	Dmel_CG6554	NP_650017.1	376	arginine methyltransferase 1
3R	NT_033777.3	10788665	10791041	+	41296	Mcm5	Dmel_CG4082	NP_524308.2	733	minichromosome maintenance 5
3R	NT_033777.3	10793033	10793449	+	41297	CG14687	Dmel_CG14687	NP_650018.1	138	uncharacterized protein Dmel_CG14687
3R	NT_033777.3	10794127	10803909	-	41298	CG14692	Dmel_CG14692	NP_650019.6	2851	uncharacterized protein Dmel_CG14692
3R	NT_033777.3	10811839	10813539	-	41299	CG14693	Dmel_CG14693	NP_996194.1	265	uncharacterized protein Dmel_CG14693, isoform B
3R	NT_033777.3	10811839	10814977	-	41299	CG14693	Dmel_CG14693	NP_650020.2	469	uncharacterized protein Dmel_CG14693, isoform C
3R	NT_033777.3	10811839	10814977	-	41299	CG14693	Dmel_CG14693	NP_001262467.1	586	uncharacterized protein Dmel_CG14693, isoform E
3R	NT_033777.3	10813565	10814977	-	41299	CG14693	Dmel_CG14693	NP_001287277.1	230	uncharacterized protein Dmel_CG14693, isoform F
3R	NT_033777.3	10814167	10814977	-	41299	CG14693	Dmel_CG14693	NP_001138034.1	189	uncharacterized protein Dmel_CG14693, isoform D
3R	NT_033777.3	10815381	10817112	+	41300	CG4089	Dmel_CG4089	NP_650021.1	516	CG4089
3R	NT_033777.3	10837859	10845696	+	41302	Cad86C	Dmel_CG42601	NP_001247034.1	1008	cadherin 86C, isoform G
3R	NT_033777.3	10837859	10848479	+	41302	Cad86C	Dmel_CG42601	NP_788635.3	1943	cadherin 86C, isoform C
3R	NT_033777.3	10837859	10848479	+	41302	Cad86C	Dmel_CG42601	NP_001247033.1	1949	cadherin 86C, isoform F
3R	NT_033777.3	10837859	10848479	+	41302	Cad86C	Dmel_CG42601	NP_001247031.1	1943	cadherin 86C, isoform D
3R	NT_033777.3	10837859	10848479	+	41302	Cad86C	Dmel_CG42601	NP_001247032.1	1915	cadherin 86C, isoform E
3R	NT_033777.3	10849985	10851483	+	7354424	CG42394	Dmel_CG42394	NP_001247035.1	77	uncharacterized protein Dmel_CG42394, isoform C
3R	NT_033777.3	10849985	10851483	+	7354424	CG42394	Dmel_CG42394	NP_001287278.1	77	uncharacterized protein Dmel_CG42394, isoform D
3R	NT_033777.3	10849985	10851483	+	7354424	CG42394	Dmel_CG42394	NP_001163584.1	77	uncharacterized protein Dmel_CG42394, isoform B
3R	NT_033777.3	10849985	10851483	+	7354424	CG42394	Dmel_CG42394	NP_001138035.1	77	uncharacterized protein Dmel_CG42394, isoform A
3R	NT_033777.3	10852742	10853606	+	41303	CG4565	Dmel_CG4565	NP_001097743.1	269	CG4565
3R	NT_033777.3	10853654	10854361	-	41304	CG6567	Dmel_CG6567	NP_001097742.1	235	CG6567
3R	NT_033777.3	10854856	10855767	+	41305	CG4511	Dmel_CG4511	NP_001163585.1	216	CG4511, isoform B
3R	NT_033777.3	10854856	10855767	+	41305	CG4511	Dmel_CG4511	NP_650026.1	216	CG4511, isoform A
3R	NT_033777.3	10857018	10857845	+	41306	CG4570	Dmel_CG4570	NP_650027.1	275	CG4570
3R	NT_033777.3	10858220	10859803	-	41307	CG14694	Dmel_CG14694	NP_650028.1	446	uncharacterized protein Dmel_CG14694
3R	NT_033777.3	10860783	10862613	-	41308	CG6574	Dmel_CG6574	NP_650029.1	444	CG6574
3R	NT_033777.3	10863635	10868041	-	41309	SelR	Dmel_CG6584	NP_731523.1	208	selenoprotein R, isoform E
3R	NT_033777.3	10863635	10866920	-	41309	SelR	Dmel_CG6584	NP_650030.1	155	selenoprotein R, isoform A
3R	NT_033777.3	10863635	10866920	-	41309	SelR	Dmel_CG6584	NP_996195.1	155	selenoprotein R, isoform I
3R	NT_033777.3	10863635	10866920	-	41309	SelR	Dmel_CG6584	NP_731524.1	166	selenoprotein R, isoform B
3R	NT_033777.3	10863635	10868041	-	41309	SelR	Dmel_CG6584	NP_731522.1	197	selenoprotein R, isoform C
3R	NT_033777.3	10865451	10866920	-	41309	SelR	Dmel_CG6584	NP_001138036.1	157	selenoprotein R, isoform G
3R	NT_033777.3	10865451	10866920	-	41309	SelR	Dmel_CG6584	NP_731525.2	150	selenoprotein R, isoform H
3R	NT_033777.3	10865451	10868041	-	41309	SelR	Dmel_CG6584	NP_001247036.1	192	selenoprotein R, isoform J
3R	NT_033777.3	10869033	10870040	+	41310	Tsp86D	Dmel_CG4591	NP_001262468.1	316	tetraspanin 86D, isoform C
3R	NT_033777.3	10869033	10869965	+	41310	Tsp86D	Dmel_CG4591	NP_001247037.1	291	tetraspanin 86D, isoform B
3R	NT_033777.3	10869033	10869965	+	41310	Tsp86D	Dmel_CG4591	NP_524309.1	291	tetraspanin 86D, isoform A
3R	NT_033777.3	10870997	10872275	-	41311	Fdh	Dmel_CG6598	NP_524310.1	379	formaldehyde dehydrogenase
3R	NT_033777.3	10873192	10874657	+	41312	CG4596	Dmel_CG4596	NP_650031.1	425	CG4596
3R	NT_033777.3	10876455	10878065	+	41313	Sodh-2	Dmel_CG4649	NP_524311.1	360	sorbitol dehydrogenase-2
3R	NT_033777.3	10878404	10879273	-	41314	CG14695	Dmel_CG14695	NP_650032.1	289	uncharacterized protein Dmel_CG14695
3R	NT_033777.3	10880006	10881004	-	41316	Tpc1	Dmel_CG6608	NP_650034.1	332	thiamine pyrophosphate carrier protein 1, isoform A
3R	NT_033777.3	10880006	10881004	-	41316	Tpc1	Dmel_CG6608	NP_731527.1	332	thiamine pyrophosphate carrier protein 1, isoform B
3R	NT_033777.3	10882534	10884834	-	41317	CG14696	Dmel_CG14696	NP_650035.1	457	uncharacterized protein Dmel_CG14696
3R	NT_033777.3	10885973	10895234	+	41320	Leash	Dmel_CG4674	NP_650037.2	520	leash
3R	NT_033777.3	10887660	10888310	-	41318	Adk3	Dmel_CG6612	NP_731529.1	216	adenylate kinase 3, isoform B
3R	NT_033777.3	10887660	10888310	-	41318	Adk3	Dmel_CG6612	NP_524312.1	216	adenylate kinase 3, isoform A
3R	NT_033777.3	10887660	10888310	-	41318	Adk3	Dmel_CG6612	NP_001287280.1	216	adenylate kinase 3, isoform D
3R	NT_033777.3	10887660	10888310	-	41318	Adk3	Dmel_CG6612	NP_001287279.1	216	adenylate kinase 3, isoform C
3R	NT_033777.3	10889915	10893182	-	41319	CG6621	Dmel_CG6621	NP_001189210.1	868	CG6621, isoform B
3R	NT_033777.3	10889915	10893182	-	41319	CG6621	Dmel_CG6621	NP_650036.2	872	CG6621, isoform A
3R	NT_033777.3	10950432	10951674	+	41321	Tengl4	Dmel_CG4683	NP_650038.2	378	testis EndoG-Like 4
3R	NT_033777.3	10993515	11045609	+	4379854	CG34114	Dmel_CG34114	NP_001163586.1	760	uncharacterized protein Dmel_CG34114, isoform C
3R	NT_033777.3	10993515	11048200	+	4379854	CG34114	Dmel_CG34114	NP_001036705.1	1087	uncharacterized protein Dmel_CG34114, isoform B
3R	NT_033777.3	11088438	11088674	+	12797883	CG43449	Dmel_CG43449	NP_001247039.1	78	uncharacterized protein Dmel_CG43449, isoform B
3R	NT_033777.3	11088438	11088674	+	12797883	CG43449	Dmel_CG43449	NP_001247038.1	78	uncharacterized protein Dmel_CG43449, isoform A
3R	NT_033777.3	11114759	11115597	-	41324	CG6629	Dmel_CG6629	NP_650041.1	261	CG6629
3R	NT_033777.3	11126700	11128313	-	53507	Ugt86Dd	Dmel_CG6633	NP_001097744.1	517	Ugt86Dd
3R	NT_033777.3	11137252	11139603	+	41326	CG4706	Dmel_CG4706	NP_650042.2	783	CG4706
3R	NT_033777.3	11144509	11145142	-	3772145	CheA86a	Dmel_CG33698	NP_001027174.1	189	chemosensory protein A 86a
3R	NT_033777.3	11151969	11153796	-	53502	Ugt86Di	Dmel_CG6658	NP_652620.1	519	Ugt86Di, isoform A
3R	NT_033777.3	11151969	11153796	-	53502	Ugt86Di	Dmel_CG6658	NP_001287281.1	519	Ugt86Di, isoform B
3R	NT_033777.3	11154655	11156513	+	53508	Ugt86Dc	Dmel_CG4739	NP_652625.2	521	Ugt86Dc
3R	NT_033777.3	11157241	11159480	+	53510	Ugt86Da	Dmel_CG18578	NP_652626.1	528	Ugt86Da
3R	NT_033777.3	11161229	11163075	+	41330	CG4757	Dmel_CG4757	NP_650043.1	550	CG4757, isoform A
3R	NT_033777.3	11161229	11163075	+	41330	CG4757	Dmel_CG4757	NP_001262469.1	550	CG4757, isoform B
3R	NT_033777.3	11164423	11166074	-	53504	Ugt86Dg	Dmel_CG17200	NP_652622.3	527	Ugt86Dg
3R	NT_033777.3	11166314	11167963	-	53506	Ugt86De	Dmel_CG6653	NP_652623.2	527	Ugt86De
3R	NT_033777.3	11168588	11170210	-	41333	Ugt35b	Dmel_CG6649	NP_524313.2	516	UDP-glycosyltransferase 35b
3R	NT_033777.3	11170944	11172624	-	41334	Ugt35a	Dmel_CG6644	NP_524314.2	537	UDP-glycosyltransferase 35a
3R	NT_033777.3	11173575	11175395	-	53501	Ugt86Dj	Dmel_CG15902	NP_652619.1	529	Ugt86Dj
3R	NT_033777.3	11175572	11177502	+	53503	Ugt86Dh	Dmel_CG4772	NP_652621.1	526	Ugt86Dh, isoform A
3R	NT_033777.3	11175572	11177502	+	53503	Ugt86Dh	Dmel_CG4772	NP_001262470.1	526	Ugt86Dh, isoform B
3R	NT_033777.3	11196106	11196834	+	41337	CG18577	Dmel_CG18577	NP_650044.1	114	uncharacterized protein Dmel_CG18577
3R	NT_033777.3	11197784	11208456	+	41339	cu	Dmel_CG31299	NP_731540.2	441	curled, isoform F
3R	NT_033777.3	11203118	11208456	+	41339	cu	Dmel_CG31299	NP_001097746.1	642	curled, isoform D
3R	NT_033777.3	11204752	11208456	+	41339	cu	Dmel_CG31299	NP_001097747.1	446	curled, isoform E
3R	NT_033777.3	11204752	11208456	+	41339	cu	Dmel_CG31299	NP_731539.2	481	curled, isoform G
3R	NT_033777.3	11205586	11208456	+	41339	cu	Dmel_CG31299	NP_001097745.1	449	curled, isoform C
3R	NT_033777.3	11206907	11208456	+	41339	cu	Dmel_CG31299	NP_001262471.1	419	curled, isoform H
3R	NT_033777.3	11209227	11209799	-	41340	SdhC	Dmel_CG6666	NP_001262472.1	171	succinate dehydrogenase, subunit C, isoform B
3R	NT_033777.3	11209227	11209799	-	41340	SdhC	Dmel_CG6666	NP_650047.3	171	succinate dehydrogenase, subunit C, isoform A
3R	NT_033777.3	11210381	11210899	+	41341	Tctp	Dmel_CG4800	NP_650048.1	172	translationally controlled tumor protein, isoform A
3R	NT_033777.3	11210381	11210899	+	41341	Tctp	Dmel_CG4800	NP_001303431.1	172	translationally controlled tumor protein, isoform B
3R	NT_033777.3	11212868	11214128	-	41342	ZnT86D	Dmel_CG6672	NP_650049.1	366	zinc transporter 86D
3R	NT_033777.3	11215551	11216261	-	41343	RpS25	Dmel_CG6684	NP_731544.1	117	ribosomal protein S25, isoform B
3R	NT_033777.3	11215551	11216261	-	41343	RpS25	Dmel_CG6684	NP_524315.2	117	ribosomal protein S25, isoform A
3R	NT_033777.3	11216613	11217878	+	41344	CG4820	Dmel_CG4820	NP_001097748.1	362	CG4820
3R	NT_033777.3	11217916	11220015	-	41345	CG6689	Dmel_CG6689	NP_650051.1	613	CG6689
3R	NT_033777.3	11220505	11221404	-	41346	CG6693	Dmel_CG6693	NP_650052.1	299	CG6693, isoform A
3R	NT_033777.3	11220505	11221404	-	41346	CG6693	Dmel_CG6693	NP_001262473.1	299	CG6693, isoform B
3R	NT_033777.3	11221930	11222850	+	41347	RpL3	Dmel_CG4863	NP_731547.1	161	ribosomal protein L3, isoform D
3R	NT_033777.3	11221930	11224850	+	41347	RpL3	Dmel_CG4863	NP_731548.2	416	ribosomal protein L3, isoform H
3R	NT_033777.3	11221930	11224850	+	41347	RpL3	Dmel_CG4863	NP_524316.1	416	ribosomal protein L3, isoform A
3R	NT_033777.3	11221930	11223139	+	41347	RpL3	Dmel_CG4863	NP_731550.2	138	ribosomal protein L3, isoform G
3R	NT_033777.3	11225536	11226377	+	41348	scpr-C	Dmel_CG5106	NP_001287282.1	262	SCP-containing protein C, isoform B
3R	NT_033777.3	11225536	11226377	+	41348	scpr-C	Dmel_CG5106	NP_650053.1	262	SCP-containing protein C, isoform A
3R	NT_033777.3	11226800	11228170	+	41349	CG17726	Dmel_CG17726	NP_650054.2	437	uncharacterized protein Dmel_CG17726
3R	NT_033777.3	11228241	11230449	-	41350	GCC88	Dmel_CG10703	NP_650055.1	695	GRIP and coiled-coil domain containing 88 kDa
3R	NT_033777.3	11230809	11231708	-	41351	CG17187	Dmel_CG17187	NP_650056.1	299	uncharacterized protein Dmel_CG17187
3R	NT_033777.3	11232017	11232418	+	41352	CG14701	Dmel_CG14701	NP_650057.1	86	uncharacterized protein Dmel_CG14701
3R	NT_033777.3	11233082	11234730	-	41353	Arfip	Dmel_CG17184	NP_650058.1	355	arfaptin
3R	NT_033777.3	11235409	11235916	+	41354	CG17721	Dmel_CG17721	NP_001247041.1	149	uncharacterized protein Dmel_CG17721, isoform C
3R	NT_033777.3	11235409	11235916	+	41354	CG17721	Dmel_CG17721	NP_001247040.1	137	uncharacterized protein Dmel_CG17721, isoform B
3R	NT_033777.3	11235409	11235916	+	41354	CG17721	Dmel_CG17721	NP_650059.1	137	uncharacterized protein Dmel_CG17721, isoform A
3R	NT_033777.3	11236357	11236560	+	326139	CG31441	Dmel_CG31441	NP_001287283.1	48	uncharacterized protein Dmel_CG31441, isoform B
3R	NT_033777.3	11236357	11237502	+	326139	CG31441	Dmel_CG31441	NP_731558.1	341	uncharacterized protein Dmel_CG31441, isoform A
3R	NT_033777.3	11237869	11240037	+	41355	CG31388	Dmel_CG31388	NP_650060.1	446	uncharacterized protein Dmel_CG31388, isoform A
3R	NT_033777.3	11237869	11238877	+	41355	CG31388	Dmel_CG31388	NP_001247042.1	246	uncharacterized protein Dmel_CG31388, isoform B
3R	NT_033777.3	11240138	11240979	-	41357	scpr-B	Dmel_CG17210	NP_650061.1	262	SCP-containing protein B
3R	NT_033777.3	11241196	11242055	+	41358	scpr-A	Dmel_CG5207	NP_650062.1	264	SCP-containing protein A
3R	NT_033777.3	11242542	11243875	-	41359	CG17734	Dmel_CG17734	NP_650063.1	101	uncharacterized protein Dmel_CG17734, isoform A
3R	NT_033777.3	11242820	11243875	-	41359	CG17734	Dmel_CG17734	NP_731561.1	95	uncharacterized protein Dmel_CG17734, isoform B
3R	NT_033777.3	11243555	11243875	-	41359	CG17734	Dmel_CG17734	NP_001247043.1	106	uncharacterized protein Dmel_CG17734, isoform C
3R	NT_033777.3	11244442	11246592	+	41360	CG5214	Dmel_CG5214	NP_650064.1	468	CG5214
3R	NT_033777.3	11346524	11348338	-	41362	KP78a	Dmel_CG6715	NP_650065.1	604	KP78b, isoform A
3R	NT_033777.3	11346524	11348338	-	41362	KP78a	Dmel_CG6715	NP_001163587.1	604	KP78b, isoform B
3R	NT_033777.3	11348528	11350645	-	41362	KP78a	Dmel_CG6715	NP_650066.1	705	KP78a
3R	NT_033777.3	11372190	11392097	+	41363	pros	Dmel_CG17228	NP_001247046.1	1703	prospero, isoform M
3R	NT_033777.3	11372190	11392097	+	41363	pros	Dmel_CG17228	NP_001247045.1	1835	prospero, isoform I
3R	NT_033777.3	11372190	11392097	+	41363	pros	Dmel_CG17228	NP_001247044.1	1674	prospero, isoform H
3R	NT_033777.3	11373090	11392097	+	41363	pros	Dmel_CG17228	NP_788636.3	1374	prospero, isoform L
3R	NT_033777.3	11373090	11392097	+	41363	pros	Dmel_CG17228	NP_731565.4	1535	prospero, isoform K
3R	NT_033777.3	11373090	11392097	+	41363	pros	Dmel_CG17228	NP_524317.4	1403	prospero, isoform J
3R	NT_033777.3	11407991	11408704	+	41364	mRpL40	Dmel_CG5242	NP_524318.1	196	mitochondrial ribosomal protein L40
3R	NT_033777.3	11409046	11409768	-	41365	mgr	Dmel_CG6719	NP_650067.1	194	merry-go-round
3R	NT_033777.3	11410138	11411281	+	117419	Irbp	Dmel_CG5247	NP_001262474.1	265	inverted repeat-binding protein, isoform B
3R	NT_033777.3	11410138	11412278	+	117419	Irbp	Dmel_CG5247	NP_536773.1	631	inverted repeat-binding protein, isoform A
3R	NT_033777.3	11412694	11416060	+	41367	Ranbp9	Dmel_CG5252	NP_650068.1	1018	Ranbp9, isoform A
3R	NT_033777.3	11412694	11416060	+	41367	Ranbp9	Dmel_CG5252	NP_001287284.1	1018	Ranbp9, isoform D
3R	NT_033777.3	11416358	11418582	-	41368	CG6723	Dmel_CG6723	NP_650069.2	587	CG6723
3R	NT_033777.3	11419089	11419292	+	19835258	CG45676	Dmel_CG45676	NP_001287285.1	67	uncharacterized protein Dmel_CG45676
3R	NT_033777.3	11419486	11421660	-	41369	ninaG	Dmel_CG6728	NP_001247047.1	581	ninaG, isoform B
3R	NT_033777.3	11419486	11421660	-	41369	ninaG	Dmel_CG6728	NP_650070.1	597	ninaG, isoform A
3R	NT_033777.3	11422395	11429539	+	41370	CG5270	Dmel_CG5270	NP_731570.2	2243	CG5270
3R	NT_033777.3	11430082	11430736	+	41371	CG18643	Dmel_CG18643	NP_650072.2	158	uncharacterized protein Dmel_CG18643, isoform B
3R	NT_033777.3	11430082	11430274	+	41371	CG18643	Dmel_CG18643	NP_001287286.1	45	uncharacterized protein Dmel_CG18643, isoform C
3R	NT_033777.3	11430844	11431489	-	41372	RpL24-like	Dmel_CG6764	NP_650073.1	191	ribosomal protein L24-like
3R	NT_033777.3	11431979	11433292	+	41373	CG5276	Dmel_CG5276	NP_650074.1	419	CG5276, isoform A
3R	NT_033777.3	11431979	11433292	+	41373	CG5276	Dmel_CG5276	NP_001287287.1	419	CG5276, isoform B
3R	NT_033777.3	11433556	11435576	-	41374	CG6744	Dmel_CG6744	NP_001247048.1	583	CG6744, isoform B
3R	NT_033777.3	11433556	11435576	-	41374	CG6744	Dmel_CG6744	NP_650075.1	583	CG6744, isoform A
3R	NT_033777.3	11436180	11437223	+	41375	CG5281	Dmel_CG5281	NP_650076.1	347	CG5281
3R	NT_033777.3	11437881	11451671	-	41377	sals	Dmel_CG31374	NP_001247050.1	563	sarcomere length short, isoform E
3R	NT_033777.3	11437881	11440951	-	41377	sals	Dmel_CG31374	NP_731574.1	533	sarcomere length short, isoform A
3R	NT_033777.3	11437881	11448166	-	41377	sals	Dmel_CG31374	NP_731573.1	935	sarcomere length short, isoform B
3R	NT_033777.3	11437881	11448166	-	41377	sals	Dmel_CG31374	NP_788637.1	935	sarcomere length short, isoform C
3R	NT_033777.3	11437881	11451671	-	41377	sals	Dmel_CG31374	NP_001287288.1	599	sarcomere length short, isoform H
3R	NT_033777.3	11437881	11448166	-	41377	sals	Dmel_CG31374	NP_001247051.1	899	sarcomere length short, isoform F
3R	NT_033777.3	11437881	11448166	-	41377	sals	Dmel_CG31374	NP_001163588.1	899	sarcomere length short, isoform D
3R	NT_033777.3	11437881	11448166	-	41377	sals	Dmel_CG31374	NP_001247049.1	899	sarcomere length short, isoform G
3R	NT_033777.3	11453007	11453806	-	41379	PGRP-LB	Dmel_CG14704	NP_731576.1	215	peptidoglycan recognition protein LB, isoform B
3R	NT_033777.3	11453007	11453806	-	41379	PGRP-LB	Dmel_CG14704	NP_001247053.1	215	peptidoglycan recognition protein LB, isoform E
3R	NT_033777.3	11453007	11457622	-	41379	PGRP-LB	Dmel_CG14704	NP_731575.1	232	peptidoglycan recognition protein LB, isoform C
3R	NT_033777.3	11453007	11453806	-	41379	PGRP-LB	Dmel_CG14704	NP_001247054.1	215	peptidoglycan recognition protein LB, isoform F
3R	NT_033777.3	11453007	11460552	-	41379	PGRP-LB	Dmel_CG14704	NP_001247052.1	255	peptidoglycan recognition protein LB, isoform D
3R	NT_033777.3	11453007	11453806	-	41379	PGRP-LB	Dmel_CG14704	NP_650079.1	215	peptidoglycan recognition protein LB, isoform A
3R	NT_033777.3	11464062	11465567	+	41376	CG17230	Dmel_CG17230	NP_731578.1	501	uncharacterized protein Dmel_CG17230, isoform B
3R	NT_033777.3	11464062	11465567	+	41376	CG17230	Dmel_CG17230	NP_650077.1	501	uncharacterized protein Dmel_CG17230, isoform A
3R	NT_033777.3	11464062	11465567	+	41376	CG17230	Dmel_CG17230	NP_001287289.1	501	uncharacterized protein Dmel_CG17230, isoform C
3R	NT_033777.3	11500353	11505452	+	41381	dpr5	Dmel_CG5308	NP_650080.3	336	defective proboscis extension response 5, isoform A
3R	NT_033777.3	11501155	11505452	+	41381	dpr5	Dmel_CG5308	NP_731580.1	298	defective proboscis extension response 5, isoform B
3R	NT_033777.3	11534500	11539979	-	3346160	dpr4	Dmel_CG33512	NP_001014616.2	323	defective proboscis extension response 4
3R	NT_033777.3	11554189	11554806	+	41383	CG14708	Dmel_CG14708	NP_650082.1	205	uncharacterized protein Dmel_CG14708
3R	NT_033777.3	11558435	11559529	+	41384	CG10898	Dmel_CG10898	NP_650083.1	340	uncharacterized protein Dmel_CG10898
3R	NT_033777.3	11560165	11561177	-	3772232	fabp	Dmel_CG6783	NP_001027177.1	317	scheggia, isoform C
3R	NT_033777.3	11560165	11561177	-	3772232	fabp	Dmel_CG6783	NP_001027175.1	317	scheggia, isoform E
3R	NT_033777.3	11560165	11561177	-	3772232	fabp	Dmel_CG6783	NP_001027176.1	317	scheggia, isoform D
3R	NT_033777.3	11560165	11561177	-	3772232	fabp	Dmel_CG6783	NP_001027178.1	317	scheggia, isoform A
3R	NT_033777.3	11561074	11566987	-	3772232	fabp	Dmel_CG6783	NP_001027179.1	157	fatty acid binding protein, isoform C
3R	NT_033777.3	11564321	11564814	-	3772232	fabp	Dmel_CG6783	NP_001027181.1	117	fatty acid binding protein, isoform A
3R	NT_033777.3	11564321	11566987	-	3772232	fabp	Dmel_CG6783	NP_001027180.1	130	fatty acid binding protein, isoform B
3R	NT_033777.3	11569758	11575670	+	41387	Mrp4	Dmel_CG14709	NP_650086.2	1316	multidrug resistance protein 4
3R	NT_033777.3	11575985	11578740	-	41388	CG6790	Dmel_CG6790	NP_650087.2	897	CG6790
3R	NT_033777.3	11578873	11581436	+	41389	CG5342	Dmel_CG5342	NP_650088.2	837	CG5342
3R	NT_033777.3	11583350	11584643	+	41390	wkd	Dmel_CG5344	NP_650089.1	363	whacked, isoform A
3R	NT_033777.3	11583350	11584643	+	41390	wkd	Dmel_CG5344	NP_731593.1	363	whacked, isoform B
3R	NT_033777.3	11585449	11589810	-	41391	CG6791	Dmel_CG6791	NP_731594.1	1112	CG6791, isoform A
3R	NT_033777.3	11585968	11589810	-	41391	CG6791	Dmel_CG6791	NP_650090.1	1243	CG6791, isoform B
3R	NT_033777.3	11591168	11604203	-	41392	Jupiter	Dmel_CG31363	NP_731599.1	208	jupiter, isoform E
3R	NT_033777.3	11591168	11619747	-	41392	Jupiter	Dmel_CG31363	NP_731596.1	197	jupiter, isoform A
3R	NT_033777.3	11591168	11619747	-	41392	Jupiter	Dmel_CG31363	NP_001262475.1	105	jupiter, isoform I
3R	NT_033777.3	11591168	11619747	-	41392	Jupiter	Dmel_CG31363	NP_731595.1	191	jupiter, isoform D
3R	NT_033777.3	11591168	11592001	-	41392	Jupiter	Dmel_CG31363	NP_731600.1	185	jupiter, isoform B
3R	NT_033777.3	11591168	11604203	-	41392	Jupiter	Dmel_CG31363	NP_731598.1	197	jupiter, isoform C
3R	NT_033777.3	11591168	11619747	-	41392	Jupiter	Dmel_CG31363	NP_731597.1	202	jupiter, isoform H
3R	NT_033777.3	11620210	11621638	+	41393	CG14710	Dmel_CG14710	NP_650092.4	415	uncharacterized protein Dmel_CG14710
3R	NT_033777.3	11621725	11623037	-	41394	CG6808	Dmel_CG6808	NP_731602.1	375	CG6808, isoform A
3R	NT_033777.3	11621725	11623037	-	41394	CG6808	Dmel_CG6808	NP_001247055.1	375	CG6808, isoform B
3R	NT_033777.3	11623411	11624835	+	41395	CG14711	Dmel_CG14711	NP_650094.1	377	uncharacterized protein Dmel_CG14711
3R	NT_033777.3	11625511	11626586	-	41396	CG6813	Dmel_CG6813	NP_001163590.1	294	CG6813, isoform C
3R	NT_033777.3	11625697	11626586	-	41396	CG6813	Dmel_CG6813	NP_731605.2	256	CG6813, isoform B
3R	NT_033777.3	11625697	11626586	-	41396	CG6813	Dmel_CG6813	NP_001287290.1	256	CG6813, isoform D
3R	NT_033777.3	11626994	11628409	+	59239	CG18764	Dmel_CG18764	NP_652712.2	409	uncharacterized protein Dmel_CG18764
3R	NT_033777.3	11628941	11632939	+	41397	CG14712	Dmel_CG14712	NP_650096.1	1266	uncharacterized protein Dmel_CG14712
3R	NT_033777.3	11634820	11643074	-	41398	Csk	Dmel_CG42317	NP_001262476.1	1052	C-terminal Src kinase, isoform L
3R	NT_033777.3	11634820	11637426	-	41398	Csk	Dmel_CG42317	NP_731609.1	723	C-terminal Src kinase, isoform K
3R	NT_033777.3	11634820	11637426	-	41398	Csk	Dmel_CG42317	NP_731608.1	723	C-terminal Src kinase, isoform J
3R	NT_033777.3	11634820	11637426	-	41398	Csk	Dmel_CG42317	NP_731607.1	723	C-terminal Src kinase, isoform I
3R	NT_033777.3	11634820	11643074	-	41398	Csk	Dmel_CG42317	NP_731611.2	1052	C-terminal Src kinase, isoform G
3R	NT_033777.3	11634820	11637426	-	41398	Csk	Dmel_CG42317	NP_788638.1	723	C-terminal Src kinase, isoform F
3R	NT_033777.3	11634820	11646845	-	41398	Csk	Dmel_CG42317	NP_650097.2	805	C-terminal Src kinase, isoform H
3R	NT_033777.3	11651008	11655187	+	41399	Elp1	Dmel_CG10535	NP_650098.1	1252	elongator complex protein 1, isoform A
3R	NT_033777.3	11651008	11655187	+	41399	Elp1	Dmel_CG10535	NP_001262477.1	1253	elongator complex protein 1, isoform B
3R	NT_033777.3	11651008	11655187	+	41399	Elp1	Dmel_CG10535	NP_001262478.1	1256	elongator complex protein 1, isoform C
3R	NT_033777.3	11667572	11673462	+	41401	CG42327	Dmel_CG42327	NP_001036706.2	1429	uncharacterized protein Dmel_CG42327
3R	NT_033777.3	11674282	11674761	+	41403	CG14715	Dmel_CG14715	NP_650101.1	138	uncharacterized protein Dmel_CG14715
3R	NT_033777.3	11674955	11678016	-	41404	CG18476	Dmel_CG18476	NP_731615.1	936	uncharacterized protein Dmel_CG18476
3R	NT_033777.3	11678552	11679105	-	41406	Taf12	Dmel_CG17358	NP_731617.2	160	TBP-associated factor 12, isoform D
3R	NT_033777.3	11678552	11679105	-	41406	Taf12	Dmel_CG17358	NP_001262479.1	160	TBP-associated factor 12, isoform E
3R	NT_033777.3	11678552	11679213	-	41406	Taf12	Dmel_CG17358	NP_731616.1	196	TBP-associated factor 12, isoform B
3R	NT_033777.3	11678552	11679213	-	41406	Taf12	Dmel_CG17358	NP_524320.1	196	TBP-associated factor 12, isoform A
3R	NT_033777.3	11679871	11680872	+	41407	Ho	Dmel_CG14716	NP_524321.1	296	heme oxygenase
3R	NT_033777.3	11680988	11684253	-	41408	CG6830	Dmel_CG6830	NP_650103.1	891	CG6830
3R	NT_033777.3	11684791	11688054	-	41409	CG6834	Dmel_CG6834	NP_650104.2	895	CG6834
3R	NT_033777.3	11688442	11689921	-	41410	CG6908	Dmel_CG6908	NP_001262480.1	415	CG6908, isoform B
3R	NT_033777.3	11688442	11690023	-	41410	CG6908	Dmel_CG6908	NP_650105.1	449	CG6908, isoform A
3R	NT_033777.3	11690445	11691799	-	59149	CG18765	Dmel_CG18765	NP_001097750.1	393	uncharacterized protein Dmel_CG18765
3R	NT_033777.3	11693573	11694226	-	41411	Fer3	Dmel_CG6913	NP_524322.1	195	48 related 3
3R	NT_033777.3	11696646	11697566	+	41412	CG14717	Dmel_CG14717	NP_650106.1	306	uncharacterized protein Dmel_CG14717, isoform A
3R	NT_033777.3	11696646	11697566	+	41412	CG14717	Dmel_CG14717	NP_001262481.1	306	uncharacterized protein Dmel_CG14717, isoform B
3R	NT_033777.3	11700746	11702086	+	41413	CG14718	Dmel_CG14718	NP_650107.1	446	uncharacterized protein Dmel_CG14718
3R	NT_033777.3	11704073	11704627	+	41414	I-t	Dmel_CG14719	NP_524323.2	184	inhibitor-t
3R	NT_033777.3	11711779	11712354	+	41415	CG14720	Dmel_CG14720	NP_650108.1	191	uncharacterized protein Dmel_CG14720
3R	NT_033777.3	11727223	11732003	+	41416	CG12594	Dmel_CG12594	NP_650109.1	686	uncharacterized protein Dmel_CG12594, isoform A
3R	NT_033777.3	11727223	11732003	+	41416	CG12594	Dmel_CG12594	NP_001262482.1	686	uncharacterized protein Dmel_CG12594, isoform B
3R	NT_033777.3	11735494	11736651	+	41417	CG14721	Dmel_CG14721	NP_650110.3	345	uncharacterized protein Dmel_CG14721, isoform A
3R	NT_033777.3	11735704	11736651	+	41417	CG14721	Dmel_CG14721	NP_001262483.1	275	uncharacterized protein Dmel_CG14721, isoform B
3R	NT_033777.3	11737026	11741657	-	41366	Blm	Dmel_CG6920	NP_524319.2	1487	bloom syndrome helicase
3R	NT_033777.3	11742154	11743725	+	41419	CG14722	Dmel_CG14722	NP_650111.3	498	uncharacterized protein Dmel_CG14722
3R	NT_033777.3	11744912	11748889	-	41420	CG6923	Dmel_CG6923	NP_001262484.1	1265	CG6923, isoform D
3R	NT_033777.3	11744939	11748889	-	41420	CG6923	Dmel_CG6923	NP_001247056.1	1256	CG6923, isoform C
3R	NT_033777.3	11744939	11748889	-	41420	CG6923	Dmel_CG6923	NP_731623.1	1256	CG6923, isoform B
3R	NT_033777.3	11744939	11748889	-	41420	CG6923	Dmel_CG6923	NP_650112.1	1256	CG6923, isoform A
3R	NT_033777.3	11750375	11750899	+	12797888	CG43062	Dmel_CG43062	NP_001247057.1	174	uncharacterized protein Dmel_CG43062
3R	NT_033777.3	11752972	11759560	-	44672	Lk6	Dmel_CG17342	NP_731624.1	1090	Lk6 kinase, isoform B
3R	NT_033777.3	11752972	11763646	-	44672	Lk6	Dmel_CG17342	NP_651986.2	1142	Lk6 kinase, isoform A
3R	NT_033777.3	11768816	11777678	-	41423	l(3)neo38	Dmel_CG6930	NP_001262485.1	455	lethal (3) neo38, isoform L
3R	NT_033777.3	11768840	11771400	-	41423	l(3)neo38	Dmel_CG6930	NP_650113.1	380	lethal (3) neo38, isoform A
3R	NT_033777.3	11768840	11777678	-	41423	l(3)neo38	Dmel_CG6930	NP_001247064.1	447	lethal (3) neo38, isoform K
3R	NT_033777.3	11768840	11777678	-	41423	l(3)neo38	Dmel_CG6930	NP_001036709.1	447	lethal (3) neo38, isoform C
3R	NT_033777.3	11768840	11777678	-	41423	l(3)neo38	Dmel_CG6930	NP_001036708.1	447	lethal (3) neo38, isoform B
3R	NT_033777.3	11768840	11771283	-	41423	l(3)neo38	Dmel_CG6930	NP_001247062.1	373	lethal (3) neo38, isoform I
3R	NT_033777.3	11768840	11771283	-	41423	l(3)neo38	Dmel_CG6930	NP_001247063.1	360	lethal (3) neo38, isoform J
3R	NT_033777.3	11768840	11771283	-	41423	l(3)neo38	Dmel_CG6930	NP_001247060.1	360	lethal (3) neo38, isoform G
3R	NT_033777.3	11768840	11771283	-	41423	l(3)neo38	Dmel_CG6930	NP_001247059.1	373	lethal (3) neo38, isoform F
3R	NT_033777.3	11768840	11777678	-	41423	l(3)neo38	Dmel_CG6930	NP_001247065.1	434	lethal (3) neo38, isoform D
3R	NT_033777.3	11781820	11786368	-	41425	CG17360	Dmel_CG17360	NP_650115.1	1354	uncharacterized protein Dmel_CG17360, isoform A
3R	NT_033777.3	11781820	11786368	-	41425	CG17360	Dmel_CG17360	NP_001262486.1	1330	uncharacterized protein Dmel_CG17360, isoform B
3R	NT_033777.3	11787582	11789232	+	41426	HisCl1	Dmel_CG14723	NP_731632.1	426	Histamine-gated chloride channel subunit 1, isoform A
3R	NT_033777.3	11787582	11789232	+	41426	HisCl1	Dmel_CG14723	NP_650116.2	422	Histamine-gated chloride channel subunit 1, isoform B
3R	NT_033777.3	11787582	11789232	+	41426	HisCl1	Dmel_CG14723	NP_001163591.1	416	Histamine-gated chloride channel subunit 1, isoform D
3R	NT_033777.3	11787582	11788426	+	41426	HisCl1	Dmel_CG14723	NP_996196.1	233	Histamine-gated chloride channel subunit 1, isoform C
3R	NT_033777.3	11789929	11796435	-	41427	Sbf	Dmel_CG6939	NP_731633.2	1973	SET domain binding factor, isoform B
3R	NT_033777.3	11789929	11796435	-	41427	Sbf	Dmel_CG6939	NP_477401.2	1993	SET domain binding factor, isoform A
3R	NT_033777.3	11797442	11806353	-	41428	ClC-a	Dmel_CG31116	NP_001097752.1	1066	chloride channel-a, isoform F
3R	NT_033777.3	11797442	11803985	-	41428	ClC-a	Dmel_CG31116	NP_731635.2	1176	chloride channel-a, isoform A
3R	NT_033777.3	11797442	11803985	-	41428	ClC-a	Dmel_CG31116	NP_731634.2	1049	chloride channel-a, isoform C
3R	NT_033777.3	11797442	11810540	-	41428	ClC-a	Dmel_CG31116	NP_001163592.1	1145	chloride channel-a, isoform H
3R	NT_033777.3	11797442	11806353	-	41428	ClC-a	Dmel_CG31116	NP_788639.1	1193	chloride channel-a, isoform D
3R	NT_033777.3	11797442	11810540	-	41428	ClC-a	Dmel_CG31116	NP_001097751.2	1018	chloride channel-a, isoform G
3R	NT_033777.3	11801227	11810540	-	41428	ClC-a	Dmel_CG31116	NP_001262487.1	221	chloride channel-a, isoform I
3R	NT_033777.3	11815502	11818942	-	41431	glo	Dmel_CG6946	NP_731639.1	586	glorund, isoform B
3R	NT_033777.3	11815502	11818942	-	41431	glo	Dmel_CG6946	NP_650120.1	586	glorund, isoform A
3R	NT_033777.3	11816720	11818942	-	41431	glo	Dmel_CG6946	NP_731640.1	179	glorund, isoform C
3R	NT_033777.3	11819712	11820161	+	41432	COX5A	Dmel_CG14724	NP_731641.1	149	cytochrome c oxidase subunit 5A, isoform B
3R	NT_033777.3	11819712	11820161	+	41432	COX5A	Dmel_CG14724	NP_477217.1	149	cytochrome c oxidase subunit 5A, isoform A
3R	NT_033777.3	11819712	11820161	+	41432	COX5A	Dmel_CG14724	NP_001262488.1	149	cytochrome c oxidase subunit 5A, isoform C
3R	NT_033777.3	11819712	11820161	+	41432	COX5A	Dmel_CG14724	NP_001303486.1	149	cytochrome c oxidase subunit 5A, isoform D
3R	NT_033777.3	11820408	11821819	-	41433	CG6950	Dmel_CG6950	NP_731644.2	450	CG6950, isoform C
3R	NT_033777.3	11820408	11821819	-	41433	CG6950	Dmel_CG6950	NP_788640.1	450	CG6950, isoform D
3R	NT_033777.3	11820408	11821819	-	41433	CG6950	Dmel_CG6950	NP_731643.2	450	CG6950, isoform A
3R	NT_033777.3	11820408	11821819	-	41433	CG6950	Dmel_CG6950	NP_650121.1	450	CG6950, isoform B
3R	NT_033777.3	11823630	11824907	-	41434	CG6959	Dmel_CG6959	NP_001138037.1	425	CG6959, isoform C
3R	NT_033777.3	11823630	11824907	-	41434	CG6959	Dmel_CG6959	NP_650122.1	425	CG6959, isoform A
3R	NT_033777.3	11877341	11879650	+	44858	sad	Dmel_CG14728	NP_650123.1	520	shadow
3R	NT_033777.3	11879780	11882424	-	41436	CG6962	Dmel_CG6962	NP_650124.1	767	CG6962
3R	NT_033777.3	11882874	11892297	+	41437	CG31368	Dmel_CG31368	NP_996198.2	1486	uncharacterized protein Dmel_CG31368, isoform D
3R	NT_033777.3	11882874	11892297	+	41437	CG31368	Dmel_CG31368	NP_731647.3	1483	uncharacterized protein Dmel_CG31368, isoform C
3R	NT_033777.3	11884063	11886835	-	41438	mthl5	Dmel_CG6965	NP_650126.2	496	methuselah-like 5, isoform A
3R	NT_033777.3	11884063	11886835	-	41438	mthl5	Dmel_CG6965	NP_001287291.1	497	methuselah-like 5, isoform B
3R	NT_033777.3	11892396	11893201	-	41440	CG6971	Dmel_CG6971	NP_650128.1	250	CG6971
3R	NT_033777.3	11894248	11902193	-	41441	Cad87A	Dmel_CG6977	NP_731649.2	1975	cadherin 87A
3R	NT_033777.3	11897657	11898349	+	5740370	CG34307	Dmel_CG34307	NP_001097753.2	190	uncharacterized protein Dmel_CG34307
3R	NT_033777.3	11931287	11933529	+	41442	CG14731	Dmel_CG14731	NP_650130.1	641	uncharacterized protein Dmel_CG14731
3R	NT_033777.3	11949805	11952748	+	41443	CG31211	Dmel_CG31211	NP_788642.1	514	uncharacterized protein Dmel_CG31211, isoform C
3R	NT_033777.3	11949805	11953918	+	41443	CG31211	Dmel_CG31211	NP_650131.1	874	uncharacterized protein Dmel_CG31211, isoform A
3R	NT_033777.3	11949805	11953918	+	41443	CG31211	Dmel_CG31211	NP_788641.1	893	uncharacterized protein Dmel_CG31211, isoform B
3R	NT_033777.3	11954361	11956289	-	48581	Hsp70Aa	Dmel_CG31366	NP_731651.1	642	Heat-shock-protein-70Aa
3R	NT_033777.3	11958789	11960717	+	44920	Hsp70Ab	Dmel_CG18743	NP_524798.2	642	Heat-shock-protein-70Ab
3R	NT_033777.3	11961043	11962712	-	41445	CG3281	Dmel_CG3281	NP_650132.1	538	CG3281
3R	NT_033777.3	11963292	11964653	+	41446	aurA	Dmel_CG3068	NP_476749.1	411	aurora A
3R	NT_033777.3	11965425	11967347	-	41447	CG12213	Dmel_CG12213	NP_001097754.1	581	uncharacterized protein Dmel_CG12213, isoform C
3R	NT_033777.3	11965425	11967347	-	41447	CG12213	Dmel_CG12213	NP_001262489.1	514	uncharacterized protein Dmel_CG12213, isoform D
3R	NT_033777.3	11965425	11967347	-	41447	CG12213	Dmel_CG12213	NP_650133.2	514	uncharacterized protein Dmel_CG12213, isoform B
3R	NT_033777.3	11965425	11967347	-	41447	CG12213	Dmel_CG12213	NP_731654.2	525	uncharacterized protein Dmel_CG12213, isoform E
3R	NT_033777.3	11969218	11971175	+	41448	GC1	Dmel_CG18347	NP_001262490.1	321	glutamate carrier 1, isoform B
3R	NT_033777.3	11969218	11971175	+	41448	GC1	Dmel_CG18347	NP_650134.1	321	glutamate carrier 1, isoform A
3R	NT_033777.3	11971776	11972868	+	41449	GC2	Dmel_CG12201	NP_731657.2	319	glutamate carrier 2, isoform B
3R	NT_033777.3	11972146	11972868	+	41449	GC2	Dmel_CG12201	NP_650135.2	240	glutamate carrier 2, isoform D
3R	NT_033777.3	11973237	11974613	-	41450	Tango9	Dmel_CG10007	NP_650136.1	381	transport and golgi organization 9, isoform A
3R	NT_033777.3	11973237	11974613	-	41450	Tango9	Dmel_CG10007	NP_001303462.1	381	transport and golgi organization 9, isoform B
3R	NT_033777.3	11975516	11977088	-	41451	CG10005	Dmel_CG10005	NP_650137.3	231	uncharacterized protein Dmel_CG10005, isoform A
3R	NT_033777.3	11975992	11977088	-	41451	CG10005	Dmel_CG10005	NP_001262491.1	182	uncharacterized protein Dmel_CG10005, isoform B
3R	NT_033777.3	11978621	11980344	-	41452	CG18547	Dmel_CG18547	NP_650138.1	345	uncharacterized protein Dmel_CG18547
3R	NT_033777.3	11980794	11981692	-	41453	CG12224	Dmel_CG12224	NP_001262492.1	228	uncharacterized protein Dmel_CG12224, isoform C
3R	NT_033777.3	11980794	11981692	-	41453	CG12224	Dmel_CG12224	NP_650139.2	228	uncharacterized protein Dmel_CG12224, isoform B
3R	NT_033777.3	11983223	11984508	-	41454	CG3397	Dmel_CG3397	NP_650140.1	342	CG3397
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788645.1	816	midline fasciclin, isoform D
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_731661.1	816	midline fasciclin, isoform B
3R	NT_033777.3	11984999	11989853	-	41455	mfas	Dmel_CG3359	NP_001247066.1	796	midline fasciclin, isoform Q
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788651.1	839	midline fasciclin, isoform O
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788648.1	881	midline fasciclin, isoform I
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788644.1	815	midline fasciclin, isoform N
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788643.1	815	midline fasciclin, isoform H
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788654.1	840	midline fasciclin, isoform M
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788655.1	905	midline fasciclin, isoform J
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788650.1	839	midline fasciclin, isoform E
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_524324.2	881	midline fasciclin, isoform C
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788647.1	816	midline fasciclin, isoform P
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788649.1	881	midline fasciclin, isoform K
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788653.1	840	midline fasciclin, isoform G
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788652.1	840	midline fasciclin, isoform F
3R	NT_033777.3	11984999	11992812	-	41455	mfas	Dmel_CG3359	NP_788646.1	816	midline fasciclin, isoform L
3R	NT_033777.3	11994742	11996022	-	41456	Tk	Dmel_CG14734	NP_650141.2	289	tachykinin, isoform A
3R	NT_033777.3	11994742	11996022	-	41456	Tk	Dmel_CG14734	NP_001262493.1	297	tachykinin, isoform B
3R	NT_033777.3	12001210	12003357	+	41457	Ect3	Dmel_CG3132	NP_650142.1	637	Ectoderm-expressed 3
3R	NT_033777.3	12008413	12010373	-	41458	KLHL18	Dmel_CG3571	NP_001262494.1	575	kelch like family member 18, isoform C
3R	NT_033777.3	12008413	12010373	-	41458	KLHL18	Dmel_CG3571	NP_650143.1	575	kelch like family member 18, isoform A
3R	NT_033777.3	12008413	12010164	-	41458	KLHL18	Dmel_CG3571	NP_731664.1	538	kelch like family member 18, isoform B
3R	NT_033777.3	12010931	12014586	+	41459	GCC185	Dmel_CG3532	NP_001097755.1	1135	GRIP and coiled-coil domain containing 185 kDa
3R	NT_033777.3	12015247	12016818	-	41460	DCAF12	Dmel_CG3313	NP_001262495.1	459	DCAF12 ortholog, isoform B
3R	NT_033777.3	12015247	12016818	-	41460	DCAF12	Dmel_CG3313	NP_650145.1	459	DCAF12 ortholog, isoform A
3R	NT_033777.3	12017226	12018380	+	41461	Spt3	Dmel_CG3169	NP_650146.1	384	Spt3
3R	NT_033777.3	12028447	12029058	-	8674050	CG42504	Dmel_CG42504	NP_001163593.1	203	uncharacterized protein Dmel_CG42505
3R	NT_033777.3	12029206	12029868	-	8674050	CG42504	Dmel_CG42504	NP_001163594.1	220	uncharacterized protein Dmel_CG42504
3R	NT_033777.3	12030035	12031701	-	8674050	CG42504	Dmel_CG42504	NP_001287292.1	474	uncharacterized protein Dmel_CG31358, isoform B
3R	NT_033777.3	12030035	12031701	-	8674050	CG42504	Dmel_CG42504	NP_650147.1	474	uncharacterized protein Dmel_CG31358, isoform A
3R	NT_033777.3	12033265	12035400	+	41465	ssp5	Dmel_CG14735	NP_650149.1	711	short spindle 5
3R	NT_033777.3	12040594	12042590	+	41466	CG14736	Dmel_CG14736	NP_731666.2	473	uncharacterized protein Dmel_CG14736, isoform E
3R	NT_033777.3	12040594	12042590	+	41466	CG14736	Dmel_CG14736	NP_731667.2	455	uncharacterized protein Dmel_CG14736, isoform D
3R	NT_033777.3	12040594	12042590	+	41466	CG14736	Dmel_CG14736	NP_001287293.1	473	uncharacterized protein Dmel_CG14736, isoform G
3R	NT_033777.3	12041071	12042590	+	41466	CG14736	Dmel_CG14736	NP_731668.3	335	uncharacterized protein Dmel_CG14736, isoform F
3R	NT_033777.3	12048352	12048972	-	41467	CG14739	Dmel_CG14739	NP_650151.1	206	uncharacterized protein Dmel_CG14739
3R	NT_033777.3	12061192	12062846	-	41468	CG14740	Dmel_CG14740	NP_650152.1	478	uncharacterized protein Dmel_CG14740
3R	NT_033777.3	12069583	12082608	-	41469	ATP8B	Dmel_CG14741	NP_001247069.2	1533	ATPase 8B, isoform H
3R	NT_033777.3	12069583	12077476	-	41469	ATP8B	Dmel_CG14741	NP_001247068.1	1496	ATPase 8B, isoform D
3R	NT_033777.3	12069583	12082608	-	41469	ATP8B	Dmel_CG14741	NP_001287296.1	1448	ATPase 8B, isoform I
3R	NT_033777.3	12069583	12082608	-	41469	ATP8B	Dmel_CG14741	NP_001247067.1	1547	ATPase 8B, isoform C
3R	NT_033777.3	12069583	12082608	-	41469	ATP8B	Dmel_CG14741	NP_001287294.1	1317	ATPase 8B, isoform F
3R	NT_033777.3	12069583	12082608	-	41469	ATP8B	Dmel_CG14741	NP_001287295.1	1462	ATPase 8B, isoform G
3R	NT_033777.3	12069583	12077476	-	41469	ATP8B	Dmel_CG14741	NP_731669.2	1726	ATPase 8B, isoform B
3R	NT_033777.3	12096677	12110983	+	41470	dpr17	Dmel_CG31361	NP_731670.1	664	defective proboscis extension response 17, isoform A
3R	NT_033777.3	12096677	12110983	+	41470	dpr17	Dmel_CG31361	NP_001287297.1	664	defective proboscis extension response 17, isoform D
3R	NT_033777.3	12107267	12110983	+	41470	dpr17	Dmel_CG31361	NP_001287298.1	508	defective proboscis extension response 17, isoform E
3R	NT_033777.3	12107267	12110983	+	41470	dpr17	Dmel_CG31361	NP_001138039.1	508	defective proboscis extension response 17, isoform C
3R	NT_033777.3	12107267	12110983	+	41470	dpr17	Dmel_CG31361	NP_731671.1	508	defective proboscis extension response 17, isoform B
3R	NT_033777.3	12121761	12123859	-	41472	CG4702	Dmel_CG4702	NP_001247072.1	314	CG4702, isoform D
3R	NT_033777.3	12121761	12123859	-	41472	CG4702	Dmel_CG4702	NP_001247071.1	286	CG4702, isoform C
3R	NT_033777.3	12121761	12123859	-	41472	CG4702	Dmel_CG4702	NP_001247070.1	314	CG4702, isoform B
3R	NT_033777.3	12121761	12123859	-	41472	CG4702	Dmel_CG4702	NP_650156.1	286	CG4702, isoform A
3R	NT_033777.3	12139820	12156169	-	41473	dpr15	Dmel_CG10095	NP_731672.1	662	defective proboscis extension response 15, isoform A
3R	NT_033777.3	12139820	12156169	-	41473	dpr15	Dmel_CG10095	NP_001287299.1	662	defective proboscis extension response 15, isoform B
3R	NT_033777.3	12162956	12165550	-	41474	Cpn	Dmel_CG4795	NP_731674.1	864	calphotin, isoform B
3R	NT_033777.3	12162956	12165550	-	41474	Cpn	Dmel_CG4795	NP_731673.1	842	calphotin, isoform A
3R	NT_033777.3	12193220	12194952	-	41475	CG4810	Dmel_CG4810	NP_731675.1	551	CG4810
3R	NT_033777.3	12195341	12195487	+	12797889	CG43450	Dmel_CG43450	NP_001247073.1	48	uncharacterized protein Dmel_CG43450
3R	NT_033777.3	12198086	12199382	+	41476	CG3809	Dmel_CG3809	NP_731676.2	396	CG3809
3R	NT_033777.3	12208360	12210305	-	41477	CG4830	Dmel_CG4830	NP_650160.1	534	CG4830
3R	NT_033777.3	12214811	12215582	+	12797890	CG14742	Dmel_CG14742	NP_001247074.1	74	uncharacterized protein Dmel_CG14742
3R	NT_033777.3	12215834	12219604	-	41479	CG4848	Dmel_CG4848	NP_650162.1	886	CG4848, isoform A
3R	NT_033777.3	12215834	12219604	-	41479	CG4848	Dmel_CG4848	NP_001262497.1	886	CG4848, isoform C
3R	NT_033777.3	12216663	12219604	-	41479	CG4848	Dmel_CG4848	NP_001262496.1	854	CG4848, isoform B
3R	NT_033777.3	12220012	12221450	-	41480	CG4860	Dmel_CG4860	NP_650163.2	415	CG4860
3R	NT_033777.3	12222483	12223962	+	41481	CG10014	Dmel_CG10014	NP_650164.1	421	uncharacterized protein Dmel_CG10014
3R	NT_033777.3	12224063	12225005	-	41482	CG17404	Dmel_CG17404	NP_650165.2	275	uncharacterized protein Dmel_CG17404
3R	NT_033777.3	12225364	12226338	-	14462452	CG12256	Dmel_CG12256	NP_650166.2	283	uncharacterized protein Dmel_CG12256
3R	NT_033777.3	12229456	12230319	+	41484	CG3916	Dmel_CG3916	NP_650167.1	267	CG3916
3R	NT_033777.3	12231799	12232677	-	46246	Pglym87	Dmel_CG17645	NP_652041.2	292	Pglym87
3R	NT_033777.3	12232854	12234647	-	41486	Cyp313a5	Dmel_CG15807	NP_650168.1	487	Cyp313a5
3R	NT_033777.3	12235070	12236899	-	41487	Cyp313a2	Dmel_CG10094	NP_650169.3	493	Cyp313a2
3R	NT_033777.3	12237279	12239109	-	41488	Cyp313a3	Dmel_CG10093	NP_650170.2	492	Cyp313a3
3R	NT_033777.3	12254307	12256526	+	41489	CG3942	Dmel_CG3942	NP_650171.2	739	CG3942
3R	NT_033777.3	12260991	12261143	+	14462454	CG44038	Dmel_CG44038	NP_001262500.1	50	uncharacterized protein Dmel_CG44038
3R	NT_033777.3	12262569	12262784	+	14462455	CG44037	Dmel_CG44037	NP_001262498.1	71	uncharacterized protein Dmel_CG44037
3R	NT_033777.3	12270920	12271252	+	41490	CG17738	Dmel_CG17738	NP_650172.1	110	uncharacterized protein Dmel_CG17738
3R	NT_033777.3	12273180	12273443	+	8674076	Sfp87B	Dmel_CG42485	NP_001163595.1	87	seminal fluid protein 87B
3R	NT_033777.3	12281595	12295443	+	41491	svp	Dmel_CG11502	NP_731681.1	746	seven up, isoform A
3R	NT_033777.3	12281595	12301001	+	41491	svp	Dmel_CG11502	NP_524325.1	543	seven up, isoform B
3R	NT_033777.3	12281595	12301034	+	41491	svp	Dmel_CG11502	NP_001262499.1	554	seven up, isoform E
3R	NT_033777.3	12290340	12301001	+	41491	svp	Dmel_CG11502	NP_731682.1	281	seven up, isoform C
3R	NT_033777.3	12311353	12313119	+	41493	CG4066	Dmel_CG4066	NP_650174.1	588	CG4066
3R	NT_033777.3	12323651	12325048	+	41494	CG10013	Dmel_CG10013	NP_650175.2	465	uncharacterized protein Dmel_CG10013
3R	NT_033777.3	12341691	12342179	+	19835010	CG44956	Dmel_CG44956	NP_001287300.1	162	uncharacterized protein Dmel_CG44956
3R	NT_033777.3	12349080	12350455	-	41495	CG10038	Dmel_CG10038	NP_731685.1	309	uncharacterized protein Dmel_CG10038, isoform B
3R	NT_033777.3	12349080	12350503	-	41495	CG10038	Dmel_CG10038	NP_650176.3	325	uncharacterized protein Dmel_CG10038, isoform A
3R	NT_033777.3	12350887	12352018	-	41496	CG10041	Dmel_CG10041	NP_650177.1	272	uncharacterized protein Dmel_CG10041
3R	NT_033777.3	12352375	12356143	-	41498	MBD-R2	Dmel_CG10042	NP_731688.2	1169	MBD-R2
3R	NT_033777.3	12360130	12362925	+	41499	CG4115	Dmel_CG4115	NP_650179.1	220	CG4115
3R	NT_033777.3	12363917	12364585	-	41500	Tim17a1	Dmel_CG10090	NP_001287301.1	222	Tim17a1, isoform B
3R	NT_033777.3	12363917	12364585	-	41500	Tim17a1	Dmel_CG10090	NP_650180.1	222	Tim17a1, isoform A
3R	NT_033777.3	12364913	12365545	-	59240	GstD10	Dmel_CG18548	NP_001287302.1	210	glutathione S transferase D10, isoform B
3R	NT_033777.3	12364913	12365545	-	59240	GstD10	Dmel_CG18548	NP_652713.1	210	glutathione S transferase D10, isoform A
3R	NT_033777.3	12366241	12366897	-	41502	GstD9	Dmel_CG10091	NP_650181.1	218	glutathione S transferase D9, isoform A
3R	NT_033777.3	12366241	12366897	-	41502	GstD9	Dmel_CG10091	NP_001287303.1	218	glutathione S transferase D9, isoform B
3R	NT_033777.3	12367942	12368571	-	41503	GstD1	Dmel_CG10045	NP_001034042.1	209	glutathione S transferase D1, isoform B
3R	NT_033777.3	12367942	12368571	-	41503	GstD1	Dmel_CG10045	NP_524326.1	209	glutathione S transferase D1, isoform A
3R	NT_033777.3	12371998	12372645	+	48335	GstD2	Dmel_CG4181	NP_524912.1	215	glutathione S transferase D2
3R	NT_033777.3	12373130	12373729	+	48336	GstD3	Dmel_CG4381	NP_788656.1	199	glutathione S transferase D3
3R	NT_033777.3	12374153	12374800	+	48337	GstD4	Dmel_CG11512	NP_524913.1	215	glutathione S transferase D4
3R	NT_033777.3	12375764	12376414	+	48338	GstD5	Dmel_CG12242	NP_524914.3	216	glutathione S transferase D5
3R	NT_033777.3	12377172	12377819	+	48339	GstD6	Dmel_CG4423	NP_524915.1	215	glutathione S transferase D6
3R	NT_033777.3	12378546	12379220	+	48340	GstD7	Dmel_CG4371	NP_525114.1	224	glutathione S transferase D7
3R	NT_033777.3	12380036	12380674	+	48341	GstD8	Dmel_CG4421	NP_524916.1	212	glutathione S transferase D8
3R	NT_033777.3	12381731	12382660	-	41511	CG10035	Dmel_CG10035	NP_001287304.1	286	uncharacterized protein Dmel_CG10035, isoform B
3R	NT_033777.3	12381731	12382660	-	41511	CG10035	Dmel_CG10035	NP_650182.1	286	uncharacterized protein Dmel_CG10035, isoform A
3R	NT_033777.3	12384347	12385534	+	41512	GstD11	Dmel_CG17639	NP_001138040.1	243	glutathione S transferase D11, isoform B
3R	NT_033777.3	12384410	12385534	+	41512	GstD11	Dmel_CG17639	NP_650183.1	222	glutathione S transferase D11, isoform A
3R	NT_033777.3	12386249	12402880	+	41513	CG34402	Dmel_CG34402	NP_001097756.1	695	uncharacterized protein Dmel_CG34402, isoform C
3R	NT_033777.3	12386288	12402880	+	41513	CG34402	Dmel_CG34402	NP_001287305.1	682	uncharacterized protein Dmel_CG34402, isoform E
3R	NT_033777.3	12387596	12388469	+	326253	CG33098	Dmel_CG33098	NP_001262502.1	230	uncharacterized protein Dmel_CG33098, isoform F
3R	NT_033777.3	12387596	12388314	+	326253	CG33098	Dmel_CG33098	NP_788658.1	199	uncharacterized protein Dmel_CG33098, isoform C
3R	NT_033777.3	12387596	12388469	+	326253	CG33098	Dmel_CG33098	NP_001262501.1	230	uncharacterized protein Dmel_CG33098, isoform E
3R	NT_033777.3	12387596	12388469	+	326253	CG33098	Dmel_CG33098	NP_788657.1	230	uncharacterized protein Dmel_CG33098, isoform B
3R	NT_033777.3	12387861	12388469	+	326253	CG33098	Dmel_CG33098	NP_788659.1	164	uncharacterized protein Dmel_CG33098, isoform D
3R	NT_033777.3	12389573	12402880	+	41513	CG34402	Dmel_CG34402	NP_001097758.1	486	uncharacterized protein Dmel_CG34402, isoform D
3R	NT_033777.3	12390906	12392494	-	3772183	CG10096	Dmel_CG10096	NP_001303463.1	451	uncharacterized protein Dmel_CG10096, isoform C
3R	NT_033777.3	12390906	12392902	-	3772183	CG10096	Dmel_CG10096	NP_001303464.1	502	uncharacterized protein Dmel_CG10096, isoform D
3R	NT_033777.3	12390906	12392494	-	3772183	CG10096	Dmel_CG10096	NP_650186.2	451	uncharacterized protein Dmel_CG10096, isoform A
3R	NT_033777.3	12390906	12392902	-	3772183	CG10096	Dmel_CG10096	NP_001027183.1	502	uncharacterized protein Dmel_CG10096, isoform B
3R	NT_033777.3	12394115	12395969	-	3772183	CG10096	Dmel_CG10096	NP_001027182.1	501	uncharacterized protein Dmel_CG10097, isoform B
3R	NT_033777.3	12394115	12395969	-	3772183	CG10096	Dmel_CG10096	NP_731699.2	501	uncharacterized protein Dmel_CG10097, isoform C
3R	NT_033777.3	12394115	12395969	-	3772183	CG10096	Dmel_CG10096	NP_001303465.1	501	uncharacterized protein Dmel_CG10097, isoform D
3R	NT_033777.3	12399100	12401745	-	41518	lig3	Dmel_CG17227	NP_650187.2	806	DNA ligase III
3R	NT_033777.3	12403427	12405908	-	41520	Cyp9f2	Dmel_CG11466	NP_650189.1	516	Cyp9f2
3R	NT_033777.3	12406724	12408019	+	41521	CG5167	Dmel_CG5167	NP_650190.1	431	CG5167
3R	NT_033777.3	12408412	12411469	+	41522	CG5196	Dmel_CG5196	NP_650191.1	427	CG5196, isoform A
3R	NT_033777.3	12409290	12411469	+	41522	CG5196	Dmel_CG5196	NP_996201.1	395	CG5196, isoform B
3R	NT_033777.3	12411908	12413383	-	47769	Dip-C	Dmel_CG5663	NP_001287306.1	491	dipeptidase C, isoform B
3R	NT_033777.3	12411908	12413383	-	47769	Dip-C	Dmel_CG5663	NP_650192.1	491	dipeptidase C, isoform A
3R	NT_033777.3	12414157	12420907	+	41524	pps	Dmel_CG6525	NP_001247075.1	2018	protein partner of snf, isoform B
3R	NT_033777.3	12414157	12420907	+	41524	pps	Dmel_CG6525	NP_650193.1	2016	protein partner of snf, isoform A
3R	NT_033777.3	12421285	12422343	-	41525	Scgbeta	Dmel_CG5657	NP_524327.1	352	sarcoglycan beta
3R	NT_033777.3	12422859	12423466	+	41526	CG17202	Dmel_CG17202	NP_650194.1	181	uncharacterized protein Dmel_CG17202
3R	NT_033777.3	12424780	12425688	-	49260	Pp1-87B	Dmel_CG5650	NP_524937.1	302	protein phosphatase 1 at 87B
3R	NT_033777.3	12426612	12427836	+	41528	NANS	Dmel_CG5232	NP_650195.1	372	N-acetylneuraminic acid synthase
3R	NT_033777.3	12427888	12429201	-	41529	CG5641	Dmel_CG5641	NP_650196.1	396	CG5641
3R	NT_033777.3	12429670	12431175	+	41530	CG5245	Dmel_CG5245	NP_650197.1	501	CG5245
3R	NT_033777.3	12431441	12432461	+	41531	Prosalpha2	Dmel_CG5266	NP_524328.1	234	proteasome alpha2 subunit
3R	NT_033777.3	12432595	12433731	-	41532	Aos1	Dmel_CG12276	NP_650198.1	337	activator of SUMO 1
3R	NT_033777.3	12434243	12435509	+	41533	CG5844	Dmel_CG5844	NP_650199.1	378	CG5844
3R	NT_033777.3	12436421	12437759	+	41536	Desat2	Dmel_CG5925	NP_650201.1	361	desaturase 2
3R	NT_033777.3	12438408	12439070	-	2768665	CG17207	Dmel_CG17207	NP_996202.1	220	uncharacterized protein Dmel_CG17207
3R	NT_033777.3	12444809	12446941	+	117369	Desat1	Dmel_CG5887	NP_731712.1	383	desaturase 1, isoform E
3R	NT_033777.3	12444809	12446941	+	117369	Desat1	Dmel_CG5887	NP_731711.1	383	desaturase 1, isoform D
3R	NT_033777.3	12444809	12446941	+	117369	Desat1	Dmel_CG5887	NP_731710.1	383	desaturase 1, isoform C
3R	NT_033777.3	12444809	12446941	+	117369	Desat1	Dmel_CG5887	NP_731709.1	383	desaturase 1, isoform B
3R	NT_033777.3	12444809	12446941	+	117369	Desat1	Dmel_CG5887	NP_652731.1	383	desaturase 1, isoform A
3R	NT_033777.3	12447737	12448966	+	41537	CG5538	Dmel_CG5538	NP_650202.1	387	CG5538
3R	NT_033777.3	12449639	12456005	+	41538	CG18549	Dmel_CG18549	NP_650203.3	436	uncharacterized protein Dmel_CG18549
3R	NT_033777.3	12452536	12452955	+	41539	CG5509	Dmel_CG5509	NP_650204.1	139	CG5509
3R	NT_033777.3	12456624	12458207	+	41540	trus	Dmel_CG5333	NP_650205.1	485	toys are us
3R	NT_033777.3	12458499	12459888	-	41541	CG5961	Dmel_CG5961	NP_001287307.1	442	CG5961, isoform C
3R	NT_033777.3	12458499	12459888	-	41541	CG5961	Dmel_CG5961	NP_650206.1	442	CG5961, isoform A
3R	NT_033777.3	12458499	12459888	-	41541	CG5961	Dmel_CG5961	NP_001189211.1	442	CG5961, isoform B
3R	NT_033777.3	12460529	12462402	+	41542	CG12267	Dmel_CG12267	NP_650207.1	522	uncharacterized protein Dmel_CG12267, isoform A
3R	NT_033777.3	12460529	12462402	+	41542	CG12267	Dmel_CG12267	NP_001189212.1	522	uncharacterized protein Dmel_CG12267, isoform B
3R	NT_033777.3	12462661	12465217	-	41543	CG5608	Dmel_CG5608	NP_650208.1	687	CG5608
3R	NT_033777.3	12465632	12467557	-	44921	Hsp70Ba	Dmel_CG31449	NP_731716.1	641	Heat-shock-protein-70Ba
3R	NT_033777.3	12502752	12504677	+	50022	Hsp70Bbb	Dmel_CG5834	NP_788663.1	641	Hsp70Bbb
3R	NT_033777.3	12506035	12507960	+	48582	Hsp70Bb	Dmel_CG31359	NP_524927.2	641	Heat-shock-protein-70Bb
3R	NT_033777.3	12509318	12511243	+	48583	Hsp70Bc	Dmel_CG6489	NP_650209.1	641	Heat-shock-protein-70Bc
3R	NT_033777.3	12512813	12522309	-	3885573	Octbeta3R	Dmel_CG42244	NP_001034048.2	1256	octopamine beta3 receptor, isoform F
3R	NT_033777.3	12512813	12522309	-	3885573	Octbeta3R	Dmel_CG42244	NP_650210.2	1118	octopamine beta3 receptor, isoform G
3R	NT_033777.3	12512813	12522309	-	3885573	Octbeta3R	Dmel_CG42244	NP_001034043.2	445	octopamine beta3 receptor, isoform J
3R	NT_033777.3	12512929	12522309	-	3885573	Octbeta3R	Dmel_CG42244	NP_001034046.3	456	octopamine beta3 receptor, isoform K
3R	NT_033777.3	12526356	12528787	+	41547	Hug	Dmel_CG6371	NP_524329.1	191	hugin
3R	NT_033777.3	12552644	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001163596.2	630	octopamine beta2 receptor, isoform F
3R	NT_033777.3	12552926	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001303505.1	536	octopamine beta2 receptor, isoform G
3R	NT_033777.3	12552926	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001247078.1	536	octopamine beta2 receptor, isoform E
3R	NT_033777.3	12552926	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001247076.1	536	octopamine beta2 receptor, isoform C
3R	NT_033777.3	12552926	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001247077.1	536	octopamine beta2 receptor, isoform D
3R	NT_033777.3	12552926	12560954	-	41549	Octbeta2R	Dmel_CG33976	NP_001034049.1	536	octopamine beta2 receptor, isoform A
3R	NT_033777.3	12624767	12627521	-	41550	Vha55	Dmel_CG17369	NP_731726.1	490	vacuolar 
3R	NT_033777.3	12624767	12627521	-	41550	Vha55	Dmel_CG17369	NP_476908.1	490	vacuolar 
3R	NT_033777.3	12624767	12627521	-	41550	Vha55	Dmel_CG17369	NP_001163597.1	490	vacuolar 
3R	NT_033777.3	12628344	12629452	+	41551	Snx3	Dmel_CG6359	NP_731727.2	167	sorting nexin 3, isoform B
3R	NT_033777.3	12628344	12629452	+	41551	Snx3	Dmel_CG6359	NP_650214.1	167	sorting nexin 3, isoform A
3R	NT_033777.3	12630715	12632975	+	41552	Not10	Dmel_CG18616	NP_650215.1	635	CCR4-NOT transcription complex subunit 10, isoform A
3R	NT_033777.3	12630715	12632975	+	41552	Not10	Dmel_CG18616	NP_001303491.1	635	CCR4-NOT transcription complex subunit 10, isoform B
3R	NT_033777.3	12633359	12634652	+	59241	CG18530	Dmel_CG18530	NP_652714.2	389	uncharacterized protein Dmel_CG18530
3R	NT_033777.3	12634917	12636202	+	41554	CG11598	Dmel_CG11598	NP_001036710.1	388	uncharacterized protein Dmel_CG11598
3R	NT_033777.3	12636553	12637880	+	41555	CG11600	Dmel_CG11600	NP_650217.2	406	uncharacterized protein Dmel_CG11600
3R	NT_033777.3	12638481	12639947	+	41556	CG11608	Dmel_CG11608	NP_650218.3	430	uncharacterized protein Dmel_CG11608
3R	NT_033777.3	12640341	12642104	-	41557	CG6753	Dmel_CG6753	NP_650219.2	405	CG6753
3R	NT_033777.3	12648359	12652586	+	41558	Dtg	Dmel_CG6234	NP_650220.2	612	Dpp target gene
3R	NT_033777.3	12656854	12660496	+	41559	CG6225	Dmel_CG6225	NP_001097759.1	704	CG6225, isoform B
3R	NT_033777.3	12656854	12660496	+	41559	CG6225	Dmel_CG6225	NP_650221.1	704	CG6225, isoform A
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262503.1	1073	uncharacterized protein Dmel_CG14395, isoform D
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262506.1	1059	uncharacterized protein Dmel_CG14395, isoform H
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262505.1	1059	uncharacterized protein Dmel_CG14395, isoform G
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262507.1	1065	uncharacterized protein Dmel_CG14395, isoform I
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262508.1	1052	uncharacterized protein Dmel_CG14395, isoform J
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001163598.1	1073	uncharacterized protein Dmel_CG14395, isoform F
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_650222.2	1073	uncharacterized protein Dmel_CG14395, isoform B
3R	NT_033777.3	12668794	12673613	+	41560	CG14395	Dmel_CG14395	NP_001262504.1	1059	uncharacterized protein Dmel_CG14395, isoform E
3R	NT_033777.3	12674649	12676005	+	41561	Gnmt	Dmel_CG6188	NP_650223.1	289	glycine N-methyltransferase
3R	NT_033777.3	12676110	12676256	-	12797893	CG43630	Dmel_CG43630	NP_001247079.1	48	uncharacterized protein Dmel_CG43630
3R	NT_033777.3	12676893	12679001	-	41562	mbo	Dmel_CG6819	NP_524330.2	702	members only
3R	NT_033777.3	12679375	12681305	-	41563	Cyp313a4	Dmel_CG6802	NP_650224.3	494	Cyp313a4
3R	NT_033777.3	12682508	12688088	-	45883	kar	Dmel_CG12286	NP_652025.2	553	karmoisin, isoform A
3R	NT_033777.3	12682925	12688088	-	45883	kar	Dmel_CG12286	NP_001189213.1	612	karmoisin, isoform B
3R	NT_033777.3	12690032	12691438	-	41565	Su(fu)	Dmel_CG6054	NP_536750.2	468	suppressor of fused
3R	NT_033777.3	12691822	12693973	+	41566	Arp1	Dmel_CG6174	NP_524331.2	376	Actin-related protein 1
3R	NT_033777.3	12692119	12692550	-	318693	CG31347	Dmel_CG31347	NP_731735.1	143	uncharacterized protein Dmel_CG31347
3R	NT_033777.3	12694340	12694747	-	41567	CG14391	Dmel_CG14391	NP_650225.2	135	uncharacterized protein Dmel_CG14391
3R	NT_033777.3	12695371	12697259	+	41568	NijC	Dmel_CG14394	NP_001097760.1	135	ninjurin C, isoform B
3R	NT_033777.3	12695371	12696651	+	41568	NijC	Dmel_CG14394	NP_001097761.1	136	ninjurin C, isoform C
3R	NT_033777.3	12695371	12696927	+	41568	NijC	Dmel_CG14394	NP_001097762.1	138	ninjurin C, isoform D
3R	NT_033777.3	12696027	12697259	+	41568	NijC	Dmel_CG14394	NP_001138043.1	130	ninjurin C, isoform G
3R	NT_033777.3	12696027	12696651	+	41568	NijC	Dmel_CG14394	NP_001138041.1	131	ninjurin C, isoform E
3R	NT_033777.3	12696027	12696927	+	41568	NijC	Dmel_CG14394	NP_001138042.1	133	ninjurin C, isoform F
3R	NT_033777.3	12697513	12704081	+	41569	Past1	Dmel_CG6148	NP_731737.1	540	putative achaete scute target 1, isoform A
3R	NT_033777.3	12698111	12704081	+	41569	Past1	Dmel_CG6148	NP_524332.2	534	putative achaete scute target 1, isoform B
3R	NT_033777.3	12705161	12705617	+	41570	CG12279	Dmel_CG12279	NP_650227.1	110	uncharacterized protein Dmel_CG12279
3R	NT_033777.3	12705671	12712207	-	41571	mus308	Dmel_CG6019	NP_524333.1	2059	mutagen-sensitive 308
3R	NT_033777.3	12713472	12720666	-	47173	Men	Dmel_CG10120	NP_731739.1	759	malic enzyme, isoform A
3R	NT_033777.3	12713472	12719534	-	47173	Men	Dmel_CG10120	NP_001262509.1	578	malic enzyme, isoform C
3R	NT_033777.3	12713472	12722197	-	47173	Men	Dmel_CG10120	NP_524880.2	763	malic enzyme, isoform B
3R	NT_033777.3	12739662	12741320	+	41573	CG5724	Dmel_CG5724	NP_650228.1	530	CG5724
3R	NT_033777.3	12742028	12743676	-	41574	CG5999	Dmel_CG5999	NP_650229.2	530	CG5999
3R	NT_033777.3	12746615	12754788	-	41575	beat-Vc	Dmel_CG14390	NP_650230.2	280	beat-Vc
3R	NT_033777.3	12811345	12813921	-	41576	CG31345	Dmel_CG31345	NP_731744.1	213	uncharacterized protein Dmel_CG31345
3R	NT_033777.3	12842218	12847024	-	41578	beat-Va	Dmel_CG10134	NP_001189214.1	300	beat-Va, isoform B
3R	NT_033777.3	12842218	12847024	-	41578	beat-Va	Dmel_CG10134	NP_001262510.1	300	beat-Va, isoform C
3R	NT_033777.3	12842218	12847024	-	41578	beat-Va	Dmel_CG10134	NP_650233.3	300	beat-Va, isoform A
3R	NT_033777.3	12855666	12857495	-	41579	CG10126	Dmel_CG10126	NP_650234.3	215	uncharacterized protein Dmel_CG10126, isoform A
3R	NT_033777.3	12855666	12859217	-	41579	CG10126	Dmel_CG10126	NP_788664.2	227	uncharacterized protein Dmel_CG10126, isoform B
3R	NT_033777.3	12892055	12892822	+	41580	d-cup	Dmel_CG14387	NP_650235.1	219	davis-cup
3R	NT_033777.3	12910181	12911230	-	41581	CG10909	Dmel_CG10909	NP_650236.1	349	uncharacterized protein Dmel_CG10909
3R	NT_033777.3	12918721	12934534	+	41583	beat-Vb	Dmel_CG31298	NP_731748.1	328	beat-Vb, isoform A
3R	NT_033777.3	12918721	12934534	+	41583	beat-Vb	Dmel_CG31298	NP_001262511.1	328	beat-Vb, isoform B
3R	NT_033777.3	12950196	12961517	-	41587	grsm	Dmel_CG7340	NP_650240.1	558	granny smith, isoform B
3R	NT_033777.3	12950196	12967600	-	41587	grsm	Dmel_CG7340	NP_731749.3	655	granny smith, isoform F
3R	NT_033777.3	12961836	12963041	+	41585	Spc25	Dmel_CG7242	NP_650239.1	222	Spc25
3R	NT_033777.3	12963823	12965772	+	41586	Cyp304a1	Dmel_CG7241	NP_731751.1	510	Cyp304a1
3R	NT_033777.3	12966029	12966602	-	41588	CG14384	Dmel_CG14384	NP_001262512.1	165	uncharacterized protein Dmel_CG14384, isoform B
3R	NT_033777.3	12966029	12966602	-	41588	CG14384	Dmel_CG14384	NP_650241.1	165	uncharacterized protein Dmel_CG14384, isoform A
3R	NT_033777.3	12968183	12970621	-	41589	CG7381	Dmel_CG7381	NP_001262513.1	625	CG7381, isoform E
3R	NT_033777.3	12968183	12970621	-	41589	CG7381	Dmel_CG7381	NP_731754.1	625	CG7381, isoform B
3R	NT_033777.3	12968183	12972068	-	41589	CG7381	Dmel_CG7381	NP_650242.1	712	CG7381, isoform A
3R	NT_033777.3	12968183	12970621	-	41589	CG7381	Dmel_CG7381	NP_731755.2	625	CG7381, isoform D
3R	NT_033777.3	12968183	12972068	-	41589	CG7381	Dmel_CG7381	NP_001262514.1	711	CG7381, isoform F
3R	NT_033777.3	12978232	12980417	+	41590	CG7091	Dmel_CG7091	NP_650243.2	509	CG7091
3R	NT_033777.3	12983740	12984240	+	41591	Paip2	Dmel_CG12358	NP_001262515.1	124	polyA-binding protein interacting protein 2, isoform B
3R	NT_033777.3	12983740	12984240	+	41591	Paip2	Dmel_CG12358	NP_524334.1	124	polyA-binding protein interacting protein 2, isoform A
3R	NT_033777.3	12986224	12990028	+	41592	CG31342	Dmel_CG31342	NP_001097764.1	823	uncharacterized protein Dmel_CG31342, isoform C
3R	NT_033777.3	12986224	12990768	+	41592	CG31342	Dmel_CG31342	NP_001097763.1	994	uncharacterized protein Dmel_CG31342, isoform B
3R	NT_033777.3	12987500	12988498	-	41593	CG14383	Dmel_CG14383	NP_650245.1	332	uncharacterized protein Dmel_CG14383
3R	NT_033777.3	12991542	12993145	-	41595	yellow-f	Dmel_CG18550	NP_001262517.1	413	yellow-f, isoform C
3R	NT_033777.3	12991542	12993145	-	41595	yellow-f	Dmel_CG18550	NP_524335.1	429	yellow-f, isoform A
3R	NT_033777.3	12991542	12993145	-	41595	yellow-f	Dmel_CG18550	NP_001262516.1	418	yellow-f, isoform B
3R	NT_033777.3	12993456	12995105	-	41596	yellow-f2	Dmel_CG8063	NP_650247.1	452	yellow-f2
3R	NT_033777.3	12995691	12996869	+	41597	CG7488	Dmel_CG7488	NP_650248.1	373	CG7488
3R	NT_033777.3	12996922	12997341	-	41598	CG17327	Dmel_CG17327	NP_731760.1	139	uncharacterized protein Dmel_CG17327, isoform A
3R	NT_033777.3	12996922	12997341	-	41598	CG17327	Dmel_CG17327	NP_001262519.1	139	uncharacterized protein Dmel_CG17327, isoform C
3R	NT_033777.3	12997325	12997522	-	41598	CG17327	Dmel_CG17327	NP_001287308.1	65	uncharacterized protein Dmel_CG44194, isoform B
3R	NT_033777.3	12997325	12997522	-	41598	CG17327	Dmel_CG17327	NP_001262518.1	65	uncharacterized protein Dmel_CG44194, isoform A
3R	NT_033777.3	12998585	13007316	+	41599	CG7518	Dmel_CG7518	NP_001163599.2	2310	CG7518, isoform I
3R	NT_033777.3	12998585	13008155	+	41599	CG7518	Dmel_CG7518	NP_731761.3	2464	CG7518, isoform H
3R	NT_033777.3	12998585	13008155	+	41599	CG7518	Dmel_CG7518	NP_001247080.1	2460	CG7518, isoform F
3R	NT_033777.3	12998585	13007643	+	41599	CG7518	Dmel_CG7518	NP_650250.4	2360	CG7518, isoform J
3R	NT_033777.3	12998585	13007316	+	41599	CG7518	Dmel_CG7518	NP_001247081.1	2306	CG7518, isoform G
3R	NT_033777.3	13008684	13011180	-	41601	CG8031	Dmel_CG8031	NP_650252.1	295	CG8031
3R	NT_033777.3	13010005	13010959	+	41600	CG11656	Dmel_CG11656	NP_650251.1	291	uncharacterized protein Dmel_CG11656
3R	NT_033777.3	13019620	13025472	+	41602	CtBP	Dmel_CG7583	NP_001262522.1	481	C-terminal binding protein, isoform H
3R	NT_033777.3	13019620	13025472	+	41602	CtBP	Dmel_CG7583	NP_001262524.1	476	C-terminal binding protein, isoform J
3R	NT_033777.3	13019620	13021677	+	41602	CtBP	Dmel_CG7583	NP_524336.2	386	C-terminal binding protein, isoform A
3R	NT_033777.3	13019620	13025411	+	41602	CtBP	Dmel_CG7583	NP_001262523.1	379	C-terminal binding protein, isoform I
3R	NT_033777.3	13019620	13021677	+	41602	CtBP	Dmel_CG7583	NP_731763.1	386	C-terminal binding protein, isoform C
3R	NT_033777.3	13019620	13021677	+	41602	CtBP	Dmel_CG7583	NP_731764.1	386	C-terminal binding protein, isoform D
3R	NT_033777.3	13019620	13025472	+	41602	CtBP	Dmel_CG7583	NP_001262521.1	473	C-terminal binding protein, isoform G
3R	NT_033777.3	13019620	13021677	+	41602	CtBP	Dmel_CG7583	NP_001262520.1	383	C-terminal binding protein, isoform F
3R	NT_033777.3	13019620	13021677	+	41602	CtBP	Dmel_CG7583	NP_731762.1	386	C-terminal binding protein, isoform B
3R	NT_033777.3	13019620	13025472	+	41602	CtBP	Dmel_CG7583	NP_001014617.1	476	C-terminal binding protein, isoform E
3R	NT_033777.3	13027301	13030051	-	26067077	CG46280	Dmel_CG46280	NP_731765.1	532	uncharacterized protein Dmel_CG46280, isoform B
3R	NT_033777.3	13027301	13030051	-	26067077	CG46280	Dmel_CG46280	NP_650253.1	532	uncharacterized protein Dmel_CG46280, isoform A
3R	NT_033777.3	13029050	13029754	-	26067078	CG46281	Dmel_CG46281	NP_001097765.2	234	uncharacterized protein Dmel_CG46281
3R	NT_033777.3	13030982	13031449	+	49762	l(3)87Df	Dmel_CG7620	NP_524942.1	110	lethal (3) 87Df
3R	NT_033777.3	13032766	13037929	+	41605	ry	Dmel_CG7642	NP_524337.1	1335	rosy
3R	NT_033777.3	13038413	13040070	+	41606	CG11668	Dmel_CG11668	NP_650254.1	398	uncharacterized protein Dmel_CG11668
3R	NT_033777.3	13040199	13041681	-	41607	snk	Dmel_CG7996	NP_524338.2	435	snake, isoform A
3R	NT_033777.3	13040199	13041681	-	41607	snk	Dmel_CG7996	NP_001097766.1	435	snake, isoform B
3R	NT_033777.3	13040744	13041681	-	41607	snk	Dmel_CG7996	NP_001262525.1	252	snake, isoform C
3R	NT_033777.3	13042092	13044006	+	41608	CG11670	Dmel_CG11670	NP_001097767.2	404	uncharacterized protein Dmel_CG11670
3R	NT_033777.3	13044206	13044529	+	19835488	CG45122	Dmel_CG45122	NP_001287309.1	86	uncharacterized protein Dmel_CG45122
3R	NT_033777.3	13044955	13047312	+	41609	Hsc70-2	Dmel_CG7756	NP_524339.1	633	heat shock protein cognate 2
3R	NT_033777.3	13047766	13049174	+	318608	CG31157	Dmel_CG31157	NP_001097769.2	387	uncharacterized protein Dmel_CG31157, isoform C
3R	NT_033777.3	13048017	13049174	+	318608	CG31157	Dmel_CG31157	NP_001262526.1	331	uncharacterized protein Dmel_CG31157, isoform D
3R	NT_033777.3	13049447	13051406	-	41610	CG7966	Dmel_CG7966	NP_650256.2	486	CG7966
3R	NT_033777.3	13052409	13056431	+	41611	pic	Dmel_CG7769	NP_650257.1	1140	piccolo
3R	NT_033777.3	13062718	13077466	+	41612	sim	Dmel_CG7771	NP_001262527.1	675	single-minded, isoform C
3R	NT_033777.3	13072499	13077466	+	41612	sim	Dmel_CG7771	NP_524340.2	688	single-minded, isoform A
3R	NT_033777.3	13072682	13077466	+	41612	sim	Dmel_CG7771	NP_001262528.1	672	single-minded, isoform D
3R	NT_033777.3	13072682	13077466	+	41612	sim	Dmel_CG7771	NP_731771.3	664	single-minded, isoform B
3R	NT_033777.3	13086258	13086712	+	12797894	CG43063	Dmel_CG43063	NP_001247082.1	134	uncharacterized protein Dmel_CG43063
3R	NT_033777.3	13088761	13163804	+	41615	timeout	Dmel_CG7855	NP_524341.3	1384	timeout
3R	NT_033777.3	13089330	13089913	+	5740483	CG34308	Dmel_CG34308	NP_001097770.3	194	uncharacterized protein Dmel_CG34308
3R	NT_033777.3	13126069	13132335	-	41616	2mit	Dmel_CG42573	NP_001262529.1	1155	2mit, isoform B
3R	NT_033777.3	13126111	13132335	-	41616	2mit	Dmel_CG42573	NP_001287311.1	1141	2mit, isoform D
3R	NT_033777.3	13126111	13132335	-	41616	2mit	Dmel_CG42573	NP_650258.2	1141	2mit, isoform A
3R	NT_033777.3	13126111	13132335	-	41616	2mit	Dmel_CG42573	NP_001287310.1	1141	2mit, isoform C
3R	NT_033777.3	13181346	13182103	+	41619	CG8138	Dmel_CG8138	NP_650260.1	233	CG8138
3R	NT_033777.3	13185665	13186468	-	41620	CG8508	Dmel_CG8508	NP_650261.1	267	CG8508
3R	NT_033777.3	13188590	13189226	+	41621	CG14380	Dmel_CG14380	NP_650262.2	168	uncharacterized protein Dmel_CG14380
3R	NT_033777.3	13191701	13192469	+	41622	CG8141	Dmel_CG8141	NP_731776.1	239	CG8141
3R	NT_033777.3	13209157	13214178	-	41623	CG8483	Dmel_CG8483	NP_650264.1	392	CG8483
3R	NT_033777.3	13219735	13220463	-	41624	CG8476	Dmel_CG8476	NP_731777.1	242	CG8476
3R	NT_033777.3	13223305	13246132	-	41625	Ace	Dmel_CG17907	NP_001262530.1	636	acetylcholine esterase, isoform C
3R	NT_033777.3	13229658	13246132	-	41625	Ace	Dmel_CG17907	NP_001163600.1	649	acetylcholine esterase, isoform B
3R	NT_033777.3	13229658	13246132	-	41625	Ace	Dmel_CG17907	NP_476953.1	649	acetylcholine esterase, isoform A
3R	NT_033777.3	13261642	13262121	+	50024	CG11686	Dmel_CG11686	NP_652204.1	70	uncharacterized protein Dmel_CG11686, isoform A
3R	NT_033777.3	13261642	13262121	+	50024	CG11686	Dmel_CG11686	NP_001262531.1	70	uncharacterized protein Dmel_CG11686, isoform B
3R	NT_033777.3	13262859	13263998	-	41626	Ravus	Dmel_CG15889	NP_731779.1	359	ravus
3R	NT_033777.3	13264516	13268892	+	41627	Su(var)3-7	Dmel_CG8599	NP_001163601.1	1248	suppressor of variegation 3-7, isoform B
3R	NT_033777.3	13264516	13268892	+	41627	Su(var)3-7	Dmel_CG8599	NP_524342.3	1250	suppressor of variegation 3-7, isoform A
3R	NT_033777.3	13269320	13271841	-	41628	TBC1D5	Dmel_CG8449	NP_731780.1	654	TBC1 domain family member 5
3R	NT_033777.3	13282402	13283953	+	41629	CG8630	Dmel_CG8630	NP_731781.1	408	CG8630
3R	NT_033777.3	13285048	13286491	-	41630	CG15888	Dmel_CG15888	NP_001034050.1	319	uncharacterized protein Dmel_CG15888
3R	NT_033777.3	13287997	13288706	-	41631	CG15887	Dmel_CG15887	NP_650270.1	137	uncharacterized protein Dmel_CG15887
3R	NT_033777.3	13290716	13291775	+	41632	Osi22	Dmel_CG8644	NP_731783.1	332	osiris 22
3R	NT_033777.3	13292209	13293138	-	41633	wntD	Dmel_CG8458	NP_650272.1	309	wnt inhibitor of dorsal
3R	NT_033777.3	13294790	13298170	+	41634	CG8773	Dmel_CG8773	NP_650273.2	994	CG8773
3R	NT_033777.3	13299014	13302231	+	41635	CG8774	Dmel_CG8774	NP_650274.2	942	CG8774, isoform A
3R	NT_033777.3	13299185	13302231	+	41635	CG8774	Dmel_CG8774	NP_731785.1	885	CG8774, isoform B
3R	NT_033777.3	13302725	13312628	+	41636	CG32473	Dmel_CG32473	NP_731786.1	1012	uncharacterized protein Dmel_CG32473, isoform A
3R	NT_033777.3	13303465	13303751	+	12797895	CG43208	Dmel_CG43208	NP_001247085.1	73	uncharacterized protein Dmel_CG43208
3R	NT_033777.3	13308589	13312628	+	41636	CG32473	Dmel_CG32473	NP_731787.1	1025	uncharacterized protein Dmel_CG32473, isoform C
3R	NT_033777.3	13309519	13312628	+	41636	CG32473	Dmel_CG32473	NP_650276.2	903	uncharacterized protein Dmel_CG32473, isoform B
3R	NT_033777.3	13312916	13313167	-	14462464	CG44142	Dmel_CG44142	NP_001262532.1	83	uncharacterized protein Dmel_CG44142
3R	NT_033777.3	13319076	13319243	-	19834892	CG45080	Dmel_CG45080	NP_001287312.1	55	uncharacterized protein Dmel_CG45080
3R	NT_033777.3	13329338	13332251	-	41638	PK2-R2	Dmel_CG8795	NP_731789.1	599	pyrokinin 2 receptor 2, isoform B
3R	NT_033777.3	13329338	13332251	-	41638	PK2-R2	Dmel_CG8795	NP_731788.1	599	pyrokinin 2 receptor 2, isoform A
3R	NT_033777.3	13340170	13344786	+	41639	PK2-R1	Dmel_CG8784	NP_731790.1	660	pyrokinin 2 receptor 1
3R	NT_033777.3	13353673	13355413	+	261599	mthl12	Dmel_CG32853	NP_731791.2	488	methuselah-like 12
3R	NT_033777.3	13362093	13362848	-	41641	poly	Dmel_CG9829	NP_524343.2	251	poly, isoform A
3R	NT_033777.3	13362093	13362848	-	41641	poly	Dmel_CG9829	NP_001189215.1	251	poly, isoform B
3R	NT_033777.3	13367761	13368693	+	41640	Dic1	Dmel_CG8790	NP_001287313.1	280	dicarboxylate carrier 1, isoform C
3R	NT_033777.3	13367761	13368693	+	41640	Dic1	Dmel_CG8790	NP_650279.1	280	dicarboxylate carrier 1, isoform A
3R	NT_033777.3	13367761	13368693	+	41640	Dic1	Dmel_CG8790	NP_731793.1	280	dicarboxylate carrier 1, isoform B
3R	NT_033777.3	13369669	13370276	+	41642	CheA87a	Dmel_CG14379	NP_650280.1	183	chemosensory protein A 87a
3R	NT_033777.3	13370331	13371746	-	41643	Lip3	Dmel_CG8823	NP_477331.1	394	Lip3
3R	NT_033777.3	13372664	13373078	+	5740636	CG34309	Dmel_CG34309	NP_001097771.1	101	uncharacterized protein Dmel_CG34309
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731796.1	424	CG9813, isoform C
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731799.1	556	CG9813, isoform B
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_001262533.1	567	CG9813, isoform G
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731800.1	556	CG9813, isoform D
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731798.1	556	CG9813, isoform A
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731797.1	424	CG9813, isoform F
3R	NT_033777.3	13373897	13379090	-	41644	CG9813	Dmel_CG9813	NP_731801.1	556	CG9813, isoform E
3R	NT_033777.3	13380140	13381343	+	41645	CG8870	Dmel_CG8870	NP_731802.1	356	CG8870
3R	NT_033777.3	13381387	13381709	-	318249	mRpS21	Dmel_CG32854	NP_731803.1	87	mitochondrial ribosomal protein S21, isoform A
3R	NT_033777.3	13381387	13381709	-	318249	mRpS21	Dmel_CG32854	NP_001262535.1	87	mitochondrial ribosomal protein S21, isoform B
3R	NT_033777.3	13383479	13384780	+	41646	Droj2	Dmel_CG8863	NP_731804.1	403	DnaJ-like-2, isoform B
3R	NT_033777.3	13383479	13384780	+	41646	Droj2	Dmel_CG8863	NP_731807.1	403	DnaJ-like-2, isoform E
3R	NT_033777.3	13383479	13384780	+	41646	Droj2	Dmel_CG8863	NP_650283.1	403	DnaJ-like-2, isoform A
3R	NT_033777.3	13383479	13384780	+	41646	Droj2	Dmel_CG8863	NP_731806.1	403	DnaJ-like-2, isoform D
3R	NT_033777.3	13383479	13384780	+	41646	Droj2	Dmel_CG8863	NP_731805.1	403	DnaJ-like-2, isoform C
3R	NT_033777.3	13385710	13388601	-	41647	CG9799	Dmel_CG9799	NP_650284.2	922	CG9799
3R	NT_033777.3	13389673	13391940	-	41648	CCHa2	Dmel_CG14375	NP_001189216.1	136	CCHamide-2, isoform B
3R	NT_033777.3	13389673	13391940	-	41648	CCHa2	Dmel_CG14375	NP_001189217.1	136	CCHamide-2, isoform C
3R	NT_033777.3	13389673	13391940	-	41648	CCHa2	Dmel_CG14375	NP_650285.1	136	CCHamide-2, isoform A
3R	NT_033777.3	13396809	13397108	-	50026	CG14374	Dmel_CG14374	NP_731809.1	99	uncharacterized protein Dmel_CG14374
3R	NT_033777.3	13397867	13398184	+	41649	CG14377	Dmel_CG14377	NP_001262536.1	105	uncharacterized protein Dmel_CG14377, isoform B
3R	NT_033777.3	13397867	13398184	+	41649	CG14377	Dmel_CG14377	NP_731810.1	105	uncharacterized protein Dmel_CG14377, isoform A
3R	NT_033777.3	13398783	13401750	-	41650	GILT1	Dmel_CG9796	NP_650287.3	250	Gamma-interferon-inducible lysosomal thiol reductase 1
3R	NT_033777.3	13402636	13402988	-	3885575	CG33977	Dmel_CG33977	NP_001034051.1	94	uncharacterized protein Dmel_CG33977
3R	NT_033777.3	13403448	13404806	-	41651	yellow-e3	Dmel_CG17045	NP_650288.1	409	yellow-e3
3R	NT_033777.3	13405307	13406933	-	41652	yellow-e2	Dmel_CG17044	NP_650289.2	435	yellow-e2
3R	NT_033777.3	13409633	13411602	-	41653	yellow-e	Dmel_CG9792	NP_524344.1	530	yellow-e
3R	NT_033777.3	13420303	13423140	+	41654	Ir87a	Dmel_CG14376	NP_650290.2	796	ionotropic receptor 87a
3R	NT_033777.3	13426604	13427734	+	48632	Act87E	Dmel_CG18290	NP_731812.1	376	actin 87E, isoform B
3R	NT_033777.3	13426604	13427734	+	48632	Act87E	Dmel_CG18290	NP_477091.1	376	actin 87E, isoform A
3R	NT_033777.3	13426604	13427734	+	48632	Act87E	Dmel_CG18290	NP_001287314.1	376	actin 87E, isoform C
3R	NT_033777.3	13429605	13434272	-	41656	yrt	Dmel_CG9764	NP_001138045.1	786	yurt, isoform C
3R	NT_033777.3	13429605	13434272	-	41656	yrt	Dmel_CG9764	NP_650291.1	972	yurt, isoform A
3R	NT_033777.3	13429605	13434272	-	41656	yrt	Dmel_CG9764	NP_001138044.1	932	yurt, isoform B
3R	NT_033777.3	13430187	13434272	-	41656	yrt	Dmel_CG9764	NP_001138046.1	919	yurt, isoform D
3R	NT_033777.3	13455915	13462761	+	41657	CG14372	Dmel_CG14372	NP_001247086.1	1001	uncharacterized protein Dmel_CG14372, isoform D
3R	NT_033777.3	13455915	13462761	+	41657	CG14372	Dmel_CG14372	NP_001034052.2	1001	uncharacterized protein Dmel_CG14372, isoform C
3R	NT_033777.3	13522951	13523535	-	41658	CG12538	Dmel_CG12538	NP_650293.1	194	uncharacterized protein Dmel_CG12538
3R	NT_033777.3	13528709	13529026	-	10178823	CG42778	Dmel_CG42778	NP_001189218.2	65	uncharacterized protein Dmel_CG42778
3R	NT_033777.3	13544315	13545215	-	318688	CG31337	Dmel_CG31337	NP_731817.1	104	uncharacterized protein Dmel_CG31337
3R	NT_033777.3	13588187	13588585	+	41659	CG14370	Dmel_CG14370	NP_650294.1	132	uncharacterized protein Dmel_CG14370
3R	NT_033777.3	13592276	13592614	-	41660	CG14369	Dmel_CG14369	NP_650295.1	112	uncharacterized protein Dmel_CG14369
3R	NT_033777.3	13608860	13609198	-	41661	CG9759	Dmel_CG9759	NP_731821.1	112	CG9759, isoform B
3R	NT_033777.3	13608860	13609198	-	41661	CG9759	Dmel_CG9759	NP_650296.1	112	CG9759, isoform A
3R	NT_033777.3	13608860	13609198	-	41661	CG9759	Dmel_CG9759	NP_001287315.1	112	CG9759, isoform C
3R	NT_033777.3	13611994	13612377	-	41662	CG9757	Dmel_CG9757	NP_001262537.1	127	CG9757, isoform B
3R	NT_033777.3	13611994	13612377	-	41662	CG9757	Dmel_CG9757	NP_476675.1	127	CG9757, isoform A
3R	NT_033777.3	13616004	13616444	+	41663	CG9269	Dmel_CG9269	NP_650297.1	146	CG9269
3R	NT_033777.3	13632062	13634762	+	41665	CG10841	Dmel_CG10841	NP_650299.1	728	uncharacterized protein Dmel_CG10841, isoform A
3R	NT_033777.3	13632062	13634762	+	41665	CG10841	Dmel_CG10841	NP_001247087.1	727	uncharacterized protein Dmel_CG10841, isoform B
3R	NT_033777.3	13636455	13645919	-	41666	sqd	Dmel_CG16901	NP_652209.1	308	squid, isoform C
3R	NT_033777.3	13636455	13645919	-	41666	sqd	Dmel_CG16901	NP_001247088.1	308	squid, isoform E
3R	NT_033777.3	13636455	13642740	-	41666	sqd	Dmel_CG16901	NP_996203.1	178	squid, isoform D
3R	NT_033777.3	13636455	13645919	-	41666	sqd	Dmel_CG16901	NP_731825.1	344	squid, isoform B
3R	NT_033777.3	13642189	13645919	-	41666	sqd	Dmel_CG16901	NP_731826.1	321	squid, isoform A
3R	NT_033777.3	13649069	13651566	+	47998	rin	Dmel_CG9412	NP_524907.2	690	rasputin, isoform B
3R	NT_033777.3	13649069	13651566	+	47998	rin	Dmel_CG9412	NP_731829.1	690	rasputin, isoform E
3R	NT_033777.3	13649069	13651566	+	47998	rin	Dmel_CG9412	NP_731828.1	690	rasputin, isoform F
3R	NT_033777.3	13649069	13651566	+	47998	rin	Dmel_CG9412	NP_731830.2	690	rasputin, isoform G
3R	NT_033777.3	13654694	13656304	-	41668	Rbp4	Dmel_CG9654	NP_476935.1	428	RNA-binding protein 4
3R	NT_033777.3	13658467	13660387	-	48535	Hrb87F	Dmel_CG12749	NP_476806.2	385	heterogeneous nuclear ribonucleoprotein at 87F, isoform E
3R	NT_033777.3	13658467	13660387	-	48535	Hrb87F	Dmel_CG12749	NP_001262538.1	385	heterogeneous nuclear ribonucleoprotein at 87F, isoform D
3R	NT_033777.3	13658467	13660387	-	48535	Hrb87F	Dmel_CG12749	NP_476807.1	385	heterogeneous nuclear ribonucleoprotein at 87F, isoform A
3R	NT_033777.3	13658467	13660387	-	48535	Hrb87F	Dmel_CG12749	NP_001163602.1	385	heterogeneous nuclear ribonucleoprotein at 87F, isoform C
3R	NT_033777.3	13661734	13666533	+	41670	B52	Dmel_CG10851	NP_788667.2	350	B52, isoform N
3R	NT_033777.3	13661734	13663108	+	41670	B52	Dmel_CG10851	NP_788670.1	147	B52, isoform F
3R	NT_033777.3	13661734	13663475	+	41670	B52	Dmel_CG10851	NP_788669.1	135	B52, isoform D
3R	NT_033777.3	13661734	13666533	+	41670	B52	Dmel_CG10851	NP_001014619.2	355	B52, isoform O
3R	NT_033777.3	13661734	13663475	+	41670	B52	Dmel_CG10851	NP_001163603.1	135	B52, isoform I
3R	NT_033777.3	13661734	13666533	+	41670	B52	Dmel_CG10851	NP_788671.2	355	B52, isoform M
3R	NT_033777.3	13661734	13666533	+	41670	B52	Dmel_CG10851	NP_788666.1	350	B52, isoform C
3R	NT_033777.3	13661734	13666392	+	41670	B52	Dmel_CG10851	NP_788668.1	329	B52, isoform B
3R	NT_033777.3	13661734	13666533	+	41670	B52	Dmel_CG10851	NP_788665.1	350	B52, isoform A
3R	NT_033777.3	13661734	13663108	+	41670	B52	Dmel_CG10851	NP_001163604.1	147	B52, isoform K
3R	NT_033777.3	13668591	13672101	-	41671	Task6	Dmel_CG9637	NP_650300.2	408	TWIK-related acid-sensitive 
3R	NT_033777.3	13668591	13672101	-	41671	Task6	Dmel_CG9637	NP_001262540.1	397	TWIK-related acid-sensitive 
3R	NT_033777.3	13668591	13672101	-	41671	Task6	Dmel_CG9637	NP_001262541.1	408	TWIK-related acid-sensitive 
3R	NT_033777.3	13668591	13672101	-	41671	Task6	Dmel_CG9637	NP_001262539.1	397	TWIK-related acid-sensitive 
3R	NT_033777.3	13675503	13676529	-	41672	CG9588	Dmel_CG9588	NP_650301.1	220	CG9588
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_650302.1	567	Lkb1 kinase, isoform B
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731846.1	567	Lkb1 kinase, isoform I
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731842.1	567	Lkb1 kinase, isoform D
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731841.1	567	Lkb1 kinase, isoform C
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731840.1	567	Lkb1 kinase, isoform A
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731843.1	567	Lkb1 kinase, isoform E
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731845.1	567	Lkb1 kinase, isoform H
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_001163606.1	567	Lkb1 kinase, isoform J
3R	NT_033777.3	13677110	13678997	+	41673	Lkb1	Dmel_CG9374	NP_731844.1	567	Lkb1 kinase, isoform F
3R	NT_033777.3	13679731	13683133	-	41674	omd	Dmel_CG9591	NP_650303.1	994	oocyte maintenance defects, isoform A
3R	NT_033777.3	13679731	13683133	-	41674	omd	Dmel_CG9591	NP_001262543.1	994	oocyte maintenance defects, isoform C
3R	NT_033777.3	13679731	13683133	-	41674	omd	Dmel_CG9591	NP_001262542.1	994	oocyte maintenance defects, isoform B
3R	NT_033777.3	13687864	13691733	+	41675	flfl	Dmel_CG9351	NP_650304.2	973	falafel, isoform D
3R	NT_033777.3	13687864	13691733	+	41675	flfl	Dmel_CG9351	NP_731849.2	980	falafel, isoform B
3R	NT_033777.3	13687864	13691733	+	41675	flfl	Dmel_CG9351	NP_731850.2	980	falafel, isoform E
3R	NT_033777.3	13694053	13695242	+	41676	CG14367	Dmel_CG14367	NP_650305.1	310	uncharacterized protein Dmel_CG14367
3R	NT_033777.3	13695537	13699302	-	41677	f-cup	Dmel_CG9611	NP_001262545.1	759	flyers-cup, isoform G
3R	NT_033777.3	13695537	13700099	-	41677	f-cup	Dmel_CG9611	NP_001262544.1	802	flyers-cup, isoform F
3R	NT_033777.3	13695537	13699302	-	41677	f-cup	Dmel_CG9611	NP_650306.1	650	flyers-cup, isoform B
3R	NT_033777.3	13695537	13698487	-	41677	f-cup	Dmel_CG9611	NP_001097774.1	620	flyers-cup, isoform E
3R	NT_033777.3	13695537	13700099	-	41677	f-cup	Dmel_CG9611	NP_731852.2	693	flyers-cup, isoform A
3R	NT_033777.3	13696284	13699302	-	41677	f-cup	Dmel_CG9611	NP_001262546.1	571	flyers-cup, isoform H
3R	NT_033777.3	13696346	13700092	-	41677	f-cup	Dmel_CG9611	NP_001097773.1	474	flyers-cup, isoform D
3R	NT_033777.3	13696438	13698487	-	41677	f-cup	Dmel_CG9611	NP_001097772.1	522	flyers-cup, isoform C
3R	NT_033777.3	13696438	13698487	-	41677	f-cup	Dmel_CG9611	NP_001262547.1	522	flyers-cup, isoform I
3R	NT_033777.3	13700701	13702999	+	41678	ninaB	Dmel_CG9347	NP_650307.2	620	neither inactivation nor afterpotential B
3R	NT_033777.3	13703113	13705327	-	41679	Adgf-D	Dmel_CG9621	NP_524345.2	502	adenosine deaminase-related growth factor D
3R	NT_033777.3	13706934	13709090	+	41680	Adgf-C	Dmel_CG9345	NP_650308.3	506	adenosine deaminase-related growth factor C
3R	NT_033777.3	13709272	13709934	-	261628	CG31469	Dmel_CG31469	NP_731853.2	164	uncharacterized protein Dmel_CG31469
3R	NT_033777.3	13710067	13710753	-	3772179	primo-1	Dmel_CG33748	NP_001027187.1	155	primo-1, isoform A
3R	NT_033777.3	13710067	13710753	-	3772179	primo-1	Dmel_CG33748	NP_001027186.1	155	primo-1, isoform B
3R	NT_033777.3	13710932	13711690	-	3772179	primo-1	Dmel_CG33748	NP_001027188.1	164	primo-2
3R	NT_033777.3	13717533	13718039	-	41682	Ubc87F	Dmel_CG9602	NP_650309.1	168	ubiquitin conjugating enzyme 87F
3R	NT_033777.3	13744964	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001262548.1	2042	uncharacterized protein Dmel_CG34383, isoform G
3R	NT_033777.3	13744964	13760693	+	5740131	CG34383	Dmel_CG34383	NP_001262552.1	2037	uncharacterized protein Dmel_CG34383, isoform L
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001262551.1	2020	uncharacterized protein Dmel_CG34383, isoform K
3R	NT_033777.3	13745675	13755638	+	5740131	CG34383	Dmel_CG34383	NP_650310.2	1308	uncharacterized protein Dmel_CG34383, isoform J
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001138047.1	2020	uncharacterized protein Dmel_CG34383, isoform F
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001097776.1	1974	uncharacterized protein Dmel_CG34383, isoform B
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001097775.2	3090	uncharacterized protein Dmel_CG34383, isoform I
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001262549.1	1974	uncharacterized protein Dmel_CG34383, isoform H
3R	NT_033777.3	13745675	13761330	+	5740131	CG34383	Dmel_CG34383	NP_001097777.1	2020	uncharacterized protein Dmel_CG34383, isoform D
3R	NT_033777.3	13745675	13762813	+	5740131	CG34383	Dmel_CG34383	NP_001097778.1	2050	uncharacterized protein Dmel_CG34383, isoform E
3R	NT_033777.3	13765860	13767036	+	41686	CG9312	Dmel_CG9312	NP_650313.1	211	CG9312
3R	NT_033777.3	13767679	13770528	+	41687	Cht5	Dmel_CG9307	NP_650314.1	595	chitinase 5
3R	NT_033777.3	13772350	13778326	+	41688	CG9297	Dmel_CG9297	NP_788674.1	952	CG9297, isoform B
3R	NT_033777.3	13772350	13778326	+	41688	CG9297	Dmel_CG9297	NP_788675.1	930	CG9297, isoform A
3R	NT_033777.3	13772350	13778326	+	41688	CG9297	Dmel_CG9297	NP_001262554.1	952	CG9297, isoform D
3R	NT_033777.3	13772350	13778326	+	41688	CG9297	Dmel_CG9297	NP_001262553.1	952	CG9297, isoform C
3R	NT_033777.3	13772350	13778326	+	41688	CG9297	Dmel_CG9297	NP_001262555.1	952	CG9297, isoform E
3R	NT_033777.3	13779707	13780004	+	7354380	CG42375	Dmel_CG42375	NP_001138048.1	80	uncharacterized protein Dmel_CG42375
3R	NT_033777.3	13780024	13780668	+	7354380	CG42375	Dmel_CG42375	NP_650316.1	214	CG9288
3R	NT_033777.3	13781054	13782067	+	41690	CG9286	Dmel_CG9286	NP_650317.3	297	CG9286
3R	NT_033777.3	13782828	13785453	+	48450	Dip-B	Dmel_CG9285	NP_731864.1	508	dipeptidase B, isoform C
3R	NT_033777.3	13782828	13785453	+	48450	Dip-B	Dmel_CG9285	NP_650318.1	508	dipeptidase B, isoform A
3R	NT_033777.3	13782828	13785453	+	48450	Dip-B	Dmel_CG9285	NP_001287316.1	508	dipeptidase B, isoform D
3R	NT_033777.3	13782828	13785453	+	48450	Dip-B	Dmel_CG9285	NP_731863.1	508	dipeptidase B, isoform B
3R	NT_033777.3	13813526	13813561	+	7354381	tal-1A	Dmel_CG42384	NP_001138050.1	11	tarsal-less 1A
3R	NT_033777.3	13813639	13813674	+	7354381	tal-1A	Dmel_CG42384	NP_001138051.1	11	tarsal-less 2A
3R	NT_033777.3	13813746	13813781	+	7354381	tal-1A	Dmel_CG42384	NP_001138052.1	11	tarsal-less 3A
3R	NT_033777.3	13813871	13813969	+	7354381	tal-1A	Dmel_CG42384	NP_001138049.1	32	tarsal-less AA
3R	NT_033777.3	13827300	13827470	-	41693	Mst87F	Dmel_CG17956	NP_524346.1	56	Male-specific RNA 87F, isoform A
3R	NT_033777.3	13827300	13827470	-	41693	Mst87F	Dmel_CG17956	NP_001287317.1	56	Male-specific RNA 87F, isoform B
3R	NT_033777.3	13834680	13837912	-	41694	Nsf2	Dmel_CG33101	NP_001287318.1	752	N-ethylmaleimide-sensitive factor 2, isoform B
3R	NT_033777.3	13834680	13837912	-	41694	Nsf2	Dmel_CG33101	NP_001287319.1	752	N-ethylmaleimide-sensitive factor 2, isoform C
3R	NT_033777.3	13834680	13837912	-	41694	Nsf2	Dmel_CG33101	NP_788676.1	752	N-ethylmaleimide-sensitive factor 2, isoform A
3R	NT_033777.3	13838774	13839799	-	261626	CG31495	Dmel_CG31495	NP_731866.1	341	uncharacterized protein Dmel_CG31495, isoform A
3R	NT_033777.3	13838774	13839799	-	261626	CG31495	Dmel_CG31495	NP_001287320.1	341	uncharacterized protein Dmel_CG31495, isoform B
3R	NT_033777.3	13854661	13855449	-	41695	CG14362	Dmel_CG14362	NP_650320.1	206	uncharacterized protein Dmel_CG14362
3R	NT_033777.3	13867498	13874179	-	45396	E5	Dmel_CG9930	NP_524825.1	524	E5
3R	NT_033777.3	13902179	13903953	+	41697	ems	Dmel_CG2988	NP_731868.1	494	empty spiracles
3R	NT_033777.3	13942348	13943402	-	41698	Art9	Dmel_CG9929	NP_650321.1	313	arginine methyltransferase 9
3R	NT_033777.3	13944699	13945782	-	41699	Art6	Dmel_CG9927	NP_650322.1	341	arginine methyltransferase 6
3R	NT_033777.3	13948835	13949110	+	251711	CG31517	Dmel_CG31517	NP_731871.1	63	uncharacterized protein Dmel_CG31517, isoform A
3R	NT_033777.3	13948835	13949110	+	251711	CG31517	Dmel_CG31517	NP_001287322.1	63	uncharacterized protein Dmel_CG31517, isoform B
3R	NT_033777.3	13950383	13951078	-	41700	CG9926	Dmel_CG9926	NP_650323.2	231	CG9926, isoform A
3R	NT_033777.3	13950383	13951078	-	41700	CG9926	Dmel_CG9926	NP_001303460.1	231	CG9926, isoform B
3R	NT_033777.3	13958922	13960333	+	41701	Ipp	Dmel_CG3028	NP_731872.1	375	inositol polyphosphate 1-phosphatase
3R	NT_033777.3	13960926	13963874	-	41702	CG9925	Dmel_CG9925	NP_650324.1	892	CG9925
3R	NT_033777.3	13965008	13967002	+	41703	Orc2	Dmel_CG3041	NP_731873.1	618	origin recognition complex subunit 2
3R	NT_033777.3	13969186	13971290	-	41704	rdx	Dmel_CG12537	NP_731875.2	406	roadkill, isoform F
3R	NT_033777.3	13969186	13982925	-	41704	rdx	Dmel_CG12537	NP_650326.3	829	roadkill, isoform E
3R	NT_033777.3	13969186	14023659	-	41704	rdx	Dmel_CG12537	NP_650325.1	403	roadkill, isoform C
3R	NT_033777.3	13969186	13971290	-	41704	rdx	Dmel_CG12537	NP_731876.2	406	roadkill, isoform A
3R	NT_033777.3	13969186	13971029	-	41704	rdx	Dmel_CG12537	NP_731877.1	374	roadkill, isoform B
3R	NT_033777.3	14029284	14031426	+	41706	Cyp6d5	Dmel_CG3050	NP_650327.1	508	Cyp6d5
3R	NT_033777.3	14032690	14034492	+	41707	CG3061	Dmel_CG3061	NP_650328.1	370	CG3061
3R	NT_033777.3	14035180	14035929	-	41708	CG9922	Dmel_CG9922	NP_650329.1	124	CG9922, isoform A
3R	NT_033777.3	14035180	14035929	-	41708	CG9922	Dmel_CG9922	NP_001262556.1	124	CG9922, isoform B
3R	NT_033777.3	14066643	14081898	+	41709	foxo	Dmel_CG3143	NP_996205.1	613	forkhead box, sub-group O, isoform B
3R	NT_033777.3	14066643	14081898	+	41709	foxo	Dmel_CG3143	NP_001303426.1	619	forkhead box, sub-group O, isoform H
3R	NT_033777.3	14066643	14081898	+	41709	foxo	Dmel_CG3143	NP_996204.1	613	forkhead box, sub-group O, isoform C
3R	NT_033777.3	14066643	14081898	+	41709	foxo	Dmel_CG3143	NP_650330.3	622	forkhead box, sub-group O, isoform F
3R	NT_033777.3	14066643	14081898	+	41709	foxo	Dmel_CG3143	NP_001262557.1	622	forkhead box, sub-group O, isoform G
3R	NT_033777.3	14091317	14092203	+	41710	Npc2b	Dmel_CG3153	NP_731880.1	159	Niemann-Pick type C-2b, isoform A
3R	NT_033777.3	14091317	14092203	+	41710	Npc2b	Dmel_CG3153	NP_650331.1	159	Niemann-Pick type C-2b, isoform B
3R	NT_033777.3	14092636	14096659	-	41711	CCHa1	Dmel_CG14358	NP_001097784.1	182	CCHamide-1
3R	NT_033777.3	14097597	14097905	-	41712	CG9920	Dmel_CG9920	NP_650333.1	102	CG9920
3R	NT_033777.3	14100646	14102717	-	41713	PK1-R	Dmel_CG9918	NP_001014620.1	430	pyrokinin 1 receptor, isoform D
3R	NT_033777.3	14100646	14102717	-	41713	PK1-R	Dmel_CG9918	NP_001247089.1	430	pyrokinin 1 receptor, isoform E
3R	NT_033777.3	14105442	14107815	-	41714	CG12402	Dmel_CG12402	NP_001303481.1	671	uncharacterized protein Dmel_CG12402, isoform C
3R	NT_033777.3	14105538	14107815	-	41714	CG12402	Dmel_CG12402	NP_001262558.1	639	uncharacterized protein Dmel_CG12402, isoform B
3R	NT_033777.3	14105559	14107815	-	41714	CG12402	Dmel_CG12402	NP_650335.1	632	uncharacterized protein Dmel_CG12402, isoform A
3R	NT_033777.3	14109445	14110823	+	41715	Or88a	Dmel_CG14360	NP_524348.2	401	odorant receptor 88a
3R	NT_033777.3	14111151	14112166	-	41716	CG14357	Dmel_CG14357	NP_650336.2	319	uncharacterized protein Dmel_CG14357
3R	NT_033777.3	14112623	14115227	-	41717	Kif19A	Dmel_CG9913	NP_996208.1	750	kinesin family member 19A
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_001247091.1	477	abelson interacting protein, isoform D
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_001247090.1	472	abelson interacting protein, isoform C
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_001262559.1	472	abelson interacting protein, isoform E
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_001097785.1	473	abelson interacting protein, isoform B
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_001262560.1	473	abelson interacting protein, isoform F
3R	NT_033777.3	14120065	14122101	-	41718	Abi	Dmel_CG9749	NP_477263.1	473	abelson interacting protein, isoform A
3R	NT_033777.3	14122712	14124187	+	41719	twf	Dmel_CG3172	NP_650338.1	343	twinfilin
3R	NT_033777.3	14124505	14125476	-	41720	140up	Dmel_CG9852	NP_476951.1	261	upstream of RpII140, isoform A
3R	NT_033777.3	14124505	14125476	-	41720	140up	Dmel_CG9852	NP_001262561.1	261	upstream of RpII140, isoform B
3R	NT_033777.3	14125947	14129738	+	41721	RpII140	Dmel_CG3180	NP_001287323.1	1176	RNA polymerase II 140kD subunit, isoform B
3R	NT_033777.3	14125947	14129738	+	41721	RpII140	Dmel_CG3180	NP_476706.1	1176	RNA polymerase II 140kD subunit, isoform A
3R	NT_033777.3	14130764	14131872	-	41722	CG14356	Dmel_CG14356	NP_650339.1	151	uncharacterized protein Dmel_CG14356
3R	NT_033777.3	14148584	14151799	-	41723	CG14355	Dmel_CG14355	NP_650340.1	1024	uncharacterized protein Dmel_CG14355
3R	NT_033777.3	14152322	14152552	-	50032	CG42500	Dmel_CG42500	NP_652212.2	76	uncharacterized protein Dmel_CG42500, isoform A
3R	NT_033777.3	14152322	14152552	-	50032	CG42500	Dmel_CG42500	NP_001262562.1	76	uncharacterized protein Dmel_CG42500, isoform B
3R	NT_033777.3	14152965	14153759	-	41724	CG9722	Dmel_CG9722	NP_650341.1	264	CG9722
3R	NT_033777.3	14154316	14154432	-	14462470	CG44215	Dmel_CG44215	NP_001334693.1	38	uncharacterized protein Dmel_CG44215, isoform C
3R	NT_033777.3	14154316	14154432	-	14462470	CG44215	Dmel_CG44215	NP_001334692.1	38	uncharacterized protein Dmel_CG44215, isoform B
3R	NT_033777.3	14154757	14157291	-	318788	CG31533	Dmel_CG31533	NP_731887.1	844	uncharacterized protein Dmel_CG31533
3R	NT_033777.3	14157597	14160182	-	318684	CG31327	Dmel_CG31327	NP_731888.1	861	uncharacterized protein Dmel_CG31327
3R	NT_033777.3	14162845	14163600	+	41725	CG3199	Dmel_CG3199	NP_650342.2	232	CG3199
3R	NT_033777.3	14177728	14214277	-	41726	Dop1R1	Dmel_CG9652	NP_001262563.1	560	dopamine 1-like receptor 1, isoform E
3R	NT_033777.3	14177803	14214277	-	41726	Dop1R1	Dmel_CG9652	NP_001303454.1	535	dopamine 1-like receptor 1, isoform F
3R	NT_033777.3	14177920	14214322	-	41726	Dop1R1	Dmel_CG9652	NP_001247092.1	511	dopamine 1-like receptor 1, isoform D
3R	NT_033777.3	14177920	14214277	-	41726	Dop1R1	Dmel_CG9652	NP_001163607.1	481	dopamine 1-like receptor 1, isoform C
3R	NT_033777.3	14177920	14214277	-	41726	Dop1R1	Dmel_CG9652	NP_477007.2	496	dopamine 1-like receptor 1, isoform B
3R	NT_033777.3	14215517	14217742	-	41727	CG9649	Dmel_CG9649	NP_650343.1	504	CG9649
3R	NT_033777.3	14218323	14220194	-	41728	CG31326	Dmel_CG31326	NP_650344.2	520	uncharacterized protein Dmel_CG31326
3R	NT_033777.3	14220689	14221579	-	326258	CG33109	Dmel_CG33109	NP_788677.1	296	uncharacterized protein Dmel_CG33109
3R	NT_033777.3	14222128	14224079	-	2768666	Sp212	Dmel_CG33329	NP_996209.2	516	Serine-peptidase 212
3R	NT_033777.3	14225181	14226716	-	41729	CG9631	Dmel_CG9631	NP_650345.1	439	CG9631
3R	NT_033777.3	14228200	14229069	-	41730	CG9624	Dmel_CG9624	NP_650346.1	289	CG9624
3R	NT_033777.3	14236680	14244677	-	12797901	CG43291	Dmel_CG43291	NP_001247093.1	137	uncharacterized protein Dmel_CG43291, isoform A
3R	NT_033777.3	14236680	14236934	-	12797901	CG43291	Dmel_CG43291	NP_001287324.1	63	uncharacterized protein Dmel_CG43291, isoform B
3R	NT_033777.3	14236680	14244677	-	12797901	CG43291	Dmel_CG43291	NP_001303506.1	137	uncharacterized protein Dmel_CG43291, isoform C
3R	NT_033777.3	14244872	14245457	-	41731	CG9616	Dmel_CG9616	NP_650347.2	155	CG9616
3R	NT_033777.3	14251524	14259907	-	41733	MetRS-m	Dmel_CG31322	NP_001262564.1	582	Methionyl-tRNA synthetase, mitochondrial, isoform B
3R	NT_033777.3	14251524	14259907	-	41733	MetRS-m	Dmel_CG31322	NP_650348.1	582	Methionyl-tRNA synthetase, mitochondrial, isoform A
3R	NT_033777.3	14251524	14259907	-	41733	MetRS-m	Dmel_CG31322	NP_001303507.1	582	Methionyl-tRNA synthetase, mitochondrial, isoform C
3R	NT_033777.3	14256153	14256733	+	12797902	CG43179	Dmel_CG43179	NP_001247094.1	152	uncharacterized protein Dmel_CG43179
3R	NT_033777.3	14260281	14261183	-	41734	CG14840	Dmel_CG14840	NP_650349.1	300	uncharacterized protein Dmel_CG14840
3R	NT_033777.3	14261520	14262416	-	41735	CG14841	Dmel_CG14841	NP_650350.1	274	uncharacterized protein Dmel_CG14841
3R	NT_033777.3	14262461	14263309	+	41736	CG14839	Dmel_CG14839	NP_650351.2	282	uncharacterized protein Dmel_CG14839
3R	NT_033777.3	14264934	14275350	-	41737	trx	Dmel_CG8651	NP_476770.1	3358	trithorax, isoform B
3R	NT_033777.3	14264934	14275350	-	41737	trx	Dmel_CG8651	NP_599108.1	3358	trithorax, isoform C
3R	NT_033777.3	14264934	14277391	-	41737	trx	Dmel_CG8651	NP_476769.1	3726	trithorax, isoform D
3R	NT_033777.3	14264934	14275350	-	41737	trx	Dmel_CG8651	NP_001014621.1	3358	trithorax, isoform E
3R	NT_033777.3	14264934	14277391	-	41737	trx	Dmel_CG8651	NP_599109.1	3726	trithorax, isoform A
3R	NT_033777.3	14290773	14301483	+	41738	CG12207	Dmel_CG12207	NP_001247097.1	366	uncharacterized protein Dmel_CG12207, isoform F
3R	NT_033777.3	14290773	14301483	+	41738	CG12207	Dmel_CG12207	NP_001287325.1	366	uncharacterized protein Dmel_CG12207, isoform G
3R	NT_033777.3	14290773	14301483	+	41738	CG12207	Dmel_CG12207	NP_650352.1	366	uncharacterized protein Dmel_CG12207, isoform B
3R	NT_033777.3	14290773	14301483	+	41738	CG12207	Dmel_CG12207	NP_731894.1	366	uncharacterized protein Dmel_CG12207, isoform C
3R	NT_033777.3	14298811	14301483	+	41738	CG12207	Dmel_CG12207	NP_001247096.1	343	uncharacterized protein Dmel_CG12207, isoform E
3R	NT_033777.3	14298811	14301483	+	41738	CG12207	Dmel_CG12207	NP_731895.1	343	uncharacterized protein Dmel_CG12207, isoform A
3R	NT_033777.3	14298811	14301483	+	41738	CG12207	Dmel_CG12207	NP_001247095.1	343	uncharacterized protein Dmel_CG12207, isoform D
3R	NT_033777.3	14302456	14304410	+	41739	CG3259	Dmel_CG3259	NP_650353.1	588	CG3259
3R	NT_033777.3	14304808	14307955	-	41740	su(Hw)	Dmel_CG8573	NP_001247098.1	941	suppressor of hairy wing, isoform C
3R	NT_033777.3	14304808	14307955	-	41740	su(Hw)	Dmel_CG8573	NP_524349.1	941	suppressor of hairy wing, isoform A
3R	NT_033777.3	14304808	14307955	-	41740	su(Hw)	Dmel_CG8573	NP_731897.1	941	suppressor of hairy wing, isoform B
3R	NT_033777.3	14309187	14309576	+	41741	RpII15	Dmel_CG3284	NP_001247099.1	129	RNA polymerase II 15kD subunit, isoform B
3R	NT_033777.3	14309187	14309576	+	41741	RpII15	Dmel_CG3284	NP_001287326.1	129	RNA polymerase II 15kD subunit, isoform C
3R	NT_033777.3	14309187	14309576	+	41741	RpII15	Dmel_CG3284	NP_731898.1	129	RNA polymerase II 15kD subunit, isoform A
3R	NT_033777.3	14310516	14314174	+	318681	CG31321	Dmel_CG31321	NP_731899.1	601	uncharacterized protein Dmel_CG31321
3R	NT_033777.3	14314936	14315609	+	41742	Crz	Dmel_CG3302	NP_524350.1	154	corazonin
3R	NT_033777.3	14316612	14318758	+	41743	PR-Set7	Dmel_CG3307	NP_731900.1	691	PR/SET domain containing protein 7, isoform B
3R	NT_033777.3	14316612	14318758	+	41743	PR-Set7	Dmel_CG3307	NP_001247100.1	691	PR/SET domain containing protein 7, isoform D
3R	NT_033777.3	14316612	14318758	+	41743	PR-Set7	Dmel_CG3307	NP_650354.1	691	PR/SET domain containing protein 7, isoform A
3R	NT_033777.3	14321786	14326281	-	41744	Afti	Dmel_CG8538	NP_001247102.1	1035	aftiphilin, isoform D
3R	NT_033777.3	14321786	14326281	-	41744	Afti	Dmel_CG8538	NP_001247101.1	1035	aftiphilin, isoform C
3R	NT_033777.3	14321786	14326281	-	41744	Afti	Dmel_CG8538	NP_650355.2	1035	aftiphilin, isoform B
3R	NT_033777.3	14327291	14327536	+	41745	ATPsynE	Dmel_CG3321	NP_001189221.1	81	ATP synthase, subunit E, isoform C
3R	NT_033777.3	14327291	14327536	+	41745	ATPsynE	Dmel_CG3321	NP_650356.1	81	ATP synthase, subunit E, isoform A
3R	NT_033777.3	14327291	14327536	+	41745	ATPsynE	Dmel_CG3321	NP_731903.1	81	ATP synthase, subunit E, isoform B
3R	NT_033777.3	14328211	14329410	+	41746	spn-B	Dmel_CG3325	NP_476740.1	341	spindle B
3R	NT_033777.3	14330224	14345170	-	41747	NK7.1	Dmel_CG8524	NP_001303453.1	721	NK7.1, isoform D
3R	NT_033777.3	14330224	14345170	-	41747	NK7.1	Dmel_CG8524	NP_731904.1	721	NK7.1, isoform B
3R	NT_033777.3	14330224	14345170	-	41747	NK7.1	Dmel_CG8524	NP_001247103.1	721	NK7.1, isoform C
3R	NT_033777.3	14330224	14345170	-	41747	NK7.1	Dmel_CG8524	NP_650357.2	721	NK7.1, isoform A
3R	NT_033777.3	14358600	14361137	-	318680	HEATR2	Dmel_CG31320	NP_731905.1	845	HEAT repeat containing 2
3R	NT_033777.3	14381086	14381529	-	41748	soti	Dmel_CG8489	NP_650358.1	147	scotti
3R	NT_033777.3	14392775	14433180	-	41749	cv-c	Dmel_CG34389	NP_001097786.1	2351	crossveinless c, isoform C
3R	NT_033777.3	14392775	14405118	-	41749	cv-c	Dmel_CG34389	NP_731907.1	1017	crossveinless c, isoform A
3R	NT_033777.3	14392775	14433180	-	41749	cv-c	Dmel_CG34389	NP_001097788.1	2351	crossveinless c, isoform D
3R	NT_033777.3	14418792	14421727	+	5740700	natalisin	Dmel_CG34388	NP_001163608.1	553	natalisin, isoform D
3R	NT_033777.3	14418792	14421727	+	5740700	natalisin	Dmel_CG34388	NP_001097789.1	552	natalisin, isoform C
3R	NT_033777.3	14509986	14511406	-	41756	HtrA2	Dmel_CG8464	NP_001262565.1	422	HTRA2-related serine protease, isoform B
3R	NT_033777.3	14509986	14511406	-	41756	HtrA2	Dmel_CG8464	NP_650366.1	422	HTRA2-related serine protease, isoform A
3R	NT_033777.3	14511924	14512634	+	41757	mRpL11	Dmel_CG3351	NP_524351.1	196	mitochondrial ribosomal protein L11
3R	NT_033777.3	14512697	14513547	-	41758	CG8461	Dmel_CG8461	NP_650367.1	244	CG8461
3R	NT_033777.3	14515613	14529791	-	41760	Pde6	Dmel_CG8279	NP_001262566.1	1124	phosphodiesterase 6, isoform C
3R	NT_033777.3	14515631	14529791	-	41760	Pde6	Dmel_CG8279	NP_650369.3	1118	phosphodiesterase 6, isoform B
3R	NT_033777.3	14515631	14529791	-	41760	Pde6	Dmel_CG8279	NP_001287327.1	1118	phosphodiesterase 6, isoform D
3R	NT_033777.3	14517053	14517439	+	5740836	CG34273	Dmel_CG34273	NP_001097790.1	128	uncharacterized protein Dmel_CG34273
3R	NT_033777.3	14521103	14522974	+	41759	Cyp313a1	Dmel_CG3360	NP_650368.1	492	Cyp313a1
3R	NT_033777.3	14559261	14560047	-	41761	CG14854	Dmel_CG14854	NP_001097791.1	186	uncharacterized protein Dmel_CG14854
3R	NT_033777.3	14560982	14561458	+	41762	CG14850	Dmel_CG14850	NP_650371.1	158	uncharacterized protein Dmel_CG14850
3R	NT_033777.3	14562362	14562820	+	41763	CG14851	Dmel_CG14851	NP_650372.1	152	uncharacterized protein Dmel_CG14851
3R	NT_033777.3	14564354	14564782	-	41764	CG8087	Dmel_CG8087	NP_731917.1	142	CG8087
3R	NT_033777.3	14565946	14566470	+	41765	CG14852	Dmel_CG14852	NP_650373.1	174	uncharacterized protein Dmel_CG14852
3R	NT_033777.3	14566808	14567398	-	318677	CG31313	Dmel_CG31313	NP_731919.1	124	uncharacterized protein Dmel_CG31313, isoform A
3R	NT_033777.3	14566808	14567398	-	318677	CG31313	Dmel_CG31313	NP_001262567.1	124	uncharacterized protein Dmel_CG31313, isoform B
3R	NT_033777.3	14567161	14567398	-	318677	CG31313	Dmel_CG31313	NP_001262568.1	59	uncharacterized protein Dmel_CG31313, isoform C
3R	NT_033777.3	14568407	14568785	-	41766	CG8066	Dmel_CG8066	NP_650374.1	104	CG8066, isoform A
3R	NT_033777.3	14568407	14568785	-	41766	CG8066	Dmel_CG8066	NP_001262569.1	104	CG8066, isoform B
3R	NT_033777.3	14569170	14569608	-	41767	Cys	Dmel_CG8050	NP_476856.1	126	Cystatin-like
3R	NT_033777.3	14570733	14574873	-	41768	CG7987	Dmel_CG7987	NP_731922.1	1283	CG7987, isoform B
3R	NT_033777.3	14570733	14574873	-	41768	CG7987	Dmel_CG7987	NP_650375.1	1283	CG7987, isoform A
3R	NT_033777.3	14576339	14576611	-	14462474	CG44094	Dmel_CG44094	NP_001262570.1	90	uncharacterized protein Dmel_CG44094
3R	NT_033777.3	14583237	14607498	+	41770	stumps	Dmel_CG31317	NP_001097792.1	1211	stumps, isoform C
3R	NT_033777.3	14591970	14607498	+	41770	stumps	Dmel_CG31317	NP_731923.2	1220	stumps, isoform E
3R	NT_033777.3	14596965	14607498	+	41770	stumps	Dmel_CG31317	NP_731924.1	1012	stumps, isoform B
3R	NT_033777.3	14602213	14607498	+	41770	stumps	Dmel_CG31317	NP_001262571.1	1029	stumps, isoform D
3R	NT_033777.3	14604489	14607498	+	41770	stumps	Dmel_CG31317	NP_001262572.1	973	stumps, isoform F
3R	NT_033777.3	14615789	14618021	+	41771	CG14853	Dmel_CG14853	NP_731925.1	374	uncharacterized protein Dmel_CG14853, isoform A
3R	NT_033777.3	14615789	14618021	+	41771	CG14853	Dmel_CG14853	NP_001262573.1	374	uncharacterized protein Dmel_CG14853, isoform C
3R	NT_033777.3	14615789	14618021	+	41771	CG14853	Dmel_CG14853	NP_650376.1	374	uncharacterized protein Dmel_CG14853, isoform B
3R	NT_033777.3	14621022	14625245	-	41772	put	Dmel_CG7904	NP_001262575.1	520	punt, isoform B
3R	NT_033777.3	14621034	14625245	-	41772	put	Dmel_CG7904	NP_731926.1	516	punt, isoform A
3R	NT_033777.3	14621034	14625245	-	41772	put	Dmel_CG7904	NP_001262574.1	516	punt, isoform C
3R	NT_033777.3	14626050	14626425	+	41773	His4r	Dmel_CG3379	NP_524352.1	103	histone H4 replacement, isoform C
3R	NT_033777.3	14626050	14626425	+	41773	His4r	Dmel_CG3379	NP_731927.1	103	histone H4 replacement, isoform A
3R	NT_033777.3	14626050	14626425	+	41773	His4r	Dmel_CG3379	NP_731928.1	103	histone H4 replacement, isoform B
3R	NT_033777.3	14626050	14626425	+	41773	His4r	Dmel_CG3379	NP_001262576.1	103	histone H4 replacement, isoform D
3R	NT_033777.3	14627010	14629946	-	41775	CG7886	Dmel_CG7886	NP_650378.1	818	CG7886
3R	NT_033777.3	14634753	14641612	+	41774	Cad88C	Dmel_CG3389	NP_731930.3	1981	cadherin 88C
3R	NT_033777.3	14644935	14649267	-	41776	l(3)L1231	Dmel_CG7832	NP_001287328.1	1200	lethal (3) L1231, isoform D
3R	NT_033777.3	14644935	14649267	-	41776	l(3)L1231	Dmel_CG7832	NP_001247104.1	1200	lethal (3) L1231, isoform C
3R	NT_033777.3	14644935	14649267	-	41776	l(3)L1231	Dmel_CG7832	NP_650379.1	1200	lethal (3) L1231, isoform A
3R	NT_033777.3	14657498	14659177	+	41777	CG3505	Dmel_CG3505	NP_650380.2	360	CG3505
3R	NT_033777.3	14659561	14660835	+	41778	Hexim	Dmel_CG3508	NP_650381.1	349	hexamethylene bisacetamide inducible, isoform A
3R	NT_033777.3	14659561	14660835	+	41778	Hexim	Dmel_CG3508	NP_731932.1	360	hexamethylene bisacetamide inducible, isoform B
3R	NT_033777.3	14661343	14663149	-	41779	Rad17	Dmel_CG7825	NP_650382.3	535	Rad17
3R	NT_033777.3	14663591	14664746	+	41780	BigH1	Dmel_CG3509	NP_650383.2	353	histone H1 variant BigH1
3R	NT_033777.3	14665837	14696605	-	3772109	Meltrin	Dmel_CG7649	NP_001027575.1	1407	meltrin, isoform C
3R	NT_033777.3	14668343	14696605	-	3772109	Meltrin	Dmel_CG7649	NP_001027576.2	975	meltrin, isoform D
3R	NT_033777.3	14698884	14723573	-	41783	kibra	Dmel_CG33967	NP_001034055.1	1288	kibra, isoform A
3R	NT_033777.3	14698884	14723573	-	41783	kibra	Dmel_CG33967	NP_001287329.1	1288	kibra, isoform B
3R	NT_033777.3	14725159	14730615	-	41784	CG7530	Dmel_CG7530	NP_650387.1	351	CG7530, isoform A
3R	NT_033777.3	14725159	14730615	-	41784	CG7530	Dmel_CG7530	NP_731940.1	351	CG7530, isoform C
3R	NT_033777.3	14725159	14728856	-	41784	CG7530	Dmel_CG7530	NP_001262577.1	341	CG7530, isoform D
3R	NT_033777.3	14725159	14730615	-	41784	CG7530	Dmel_CG7530	NP_731939.1	351	CG7530, isoform B
3R	NT_033777.3	14733495	14740403	-	41785	eff	Dmel_CG7425	NP_001262579.1	147	effete, isoform C
3R	NT_033777.3	14733495	14740403	-	41785	eff	Dmel_CG7425	NP_731941.1	147	effete, isoform A
3R	NT_033777.3	14733495	14740403	-	41785	eff	Dmel_CG7425	NP_001262578.1	147	effete, isoform B
3R	NT_033777.3	14742178	14795062	+	41788	jvl	Dmel_CG43162	NP_001247105.1	1315	javelin-like, isoform D
3R	NT_033777.3	14742178	14793490	+	41788	jvl	Dmel_CG43162	NP_650389.2	1153	javelin-like, isoform A
3R	NT_033777.3	14742178	14791294	+	41788	jvl	Dmel_CG43162	NP_001247107.1	1151	javelin-like, isoform F
3R	NT_033777.3	14746156	14747125	-	41786	smp-30	Dmel_CG7390	NP_731942.1	303	senescence marker protein-30, isoform B
3R	NT_033777.3	14746156	14747125	-	41786	smp-30	Dmel_CG7390	NP_524353.2	303	senescence marker protein-30, isoform A
3R	NT_033777.3	14746156	14747125	-	41786	smp-30	Dmel_CG7390	NP_001262581.1	303	senescence marker protein-30, isoform D
3R	NT_033777.3	14746156	14751129	-	41786	smp-30	Dmel_CG7390	NP_001262580.1	306	senescence marker protein-30, isoform C
3R	NT_033777.3	14751876	14754316	-	41787	CG7362	Dmel_CG7362	NP_650388.2	793	CG7362
3R	NT_033777.3	14788225	14793490	+	41788	jvl	Dmel_CG43162	NP_001247106.1	958	javelin-like, isoform E
3R	NT_033777.3	14788225	14793490	+	41788	jvl	Dmel_CG43162	NP_996210.1	959	javelin-like, isoform B
3R	NT_033777.3	14788225	14793490	+	41788	jvl	Dmel_CG43162	NP_001097793.1	958	javelin-like, isoform C
3R	NT_033777.3	14788225	14795062	+	41788	jvl	Dmel_CG43162	NP_001247108.1	1120	javelin-like, isoform G
3R	NT_033777.3	14796551	14798418	+	41789	CG14855	Dmel_CG14855	NP_650390.2	556	uncharacterized protein Dmel_CG14855
3R	NT_033777.3	14799072	14800924	+	41790	CG14856	Dmel_CG14856	NP_650391.1	557	uncharacterized protein Dmel_CG14856
3R	NT_033777.3	14801805	14803986	+	41791	CG14857	Dmel_CG14857	NP_650392.1	560	uncharacterized protein Dmel_CG14857
3R	NT_033777.3	14807180	14826880	-	3346167	btsz	Dmel_CG44012	NP_001138056.1	1137	bitesize, isoform H
3R	NT_033777.3	14807180	14810122	-	3346167	btsz	Dmel_CG44012	NP_001097794.1	708	bitesize, isoform E
3R	NT_033777.3	14807180	14817531	-	3346167	btsz	Dmel_CG44012	NP_001014623.1	1517	bitesize, isoform D
3R	NT_033777.3	14807180	14830585	-	3346167	btsz	Dmel_CG44012	NP_001247109.1	3734	bitesize, isoform I
3R	NT_033777.3	14807180	14859838	-	3346167	btsz	Dmel_CG44012	NP_001262582.1	1567	bitesize, isoform G
3R	NT_033777.3	14807180	14810122	-	3346167	btsz	Dmel_CG44012	NP_001138055.1	600	bitesize, isoform F
3R	NT_033777.3	14807180	14826880	-	3346167	btsz	Dmel_CG44012	NP_001014625.1	1102	bitesize, isoform B
3R	NT_033777.3	14807180	14859838	-	3346167	btsz	Dmel_CG44012	NP_001014622.3	1567	bitesize, isoform J
3R	NT_033777.3	14807180	14820915	-	3346167	btsz	Dmel_CG44012	NP_001014624.1	2645	bitesize, isoform C
3R	NT_033777.3	14845207	14846673	+	41795	CG3610	Dmel_CG3610	NP_650396.1	488	CG3610
3R	NT_033777.3	14880516	14882060	+	41797	CG3631	Dmel_CG3631	NP_731951.2	421	CG3631, isoform D
3R	NT_033777.3	14880516	14882060	+	41797	CG3631	Dmel_CG3631	NP_996212.1	421	CG3631, isoform C
3R	NT_033777.3	14880516	14882060	+	41797	CG3631	Dmel_CG3631	NP_650398.3	421	CG3631, isoform E
3R	NT_033777.3	14882724	14885942	-	41798	Rrp6	Dmel_CG7292	NP_001097795.1	900	Rrp6, isoform B
3R	NT_033777.3	14882724	14885942	-	41798	Rrp6	Dmel_CG7292	NP_001287330.1	900	Rrp6, isoform C
3R	NT_033777.3	14886582	14887610	+	2768668	CG33331	Dmel_CG33331	NP_996213.1	342	uncharacterized protein Dmel_CG33331
3R	NT_033777.3	14887850	14888959	+	2768669	CG33332	Dmel_CG33332	NP_996214.1	349	uncharacterized protein Dmel_CG33332
3R	NT_033777.3	14889194	14890057	-	41801	CycC	Dmel_CG7281	NP_476848.1	267	cyclin C
3R	NT_033777.3	14890358	14892295	+	41800	UQCR-C1	Dmel_CG3731	NP_650401.1	470	Ubiquinol-cytochrome c reductase core protein 1, isoform B
3R	NT_033777.3	14890358	14892295	+	41800	UQCR-C1	Dmel_CG3731	NP_731954.1	470	Ubiquinol-cytochrome c reductase core protein 1, isoform A
3R	NT_033777.3	14892407	14893869	-	41802	CG7265	Dmel_CG7265	NP_650402.1	469	CG7265
3R	NT_033777.3	14894835	14895686	+	41803	CG14860	Dmel_CG14860	NP_650403.2	263	uncharacterized protein Dmel_CG14860
3R	NT_033777.3	14895724	14898287	-	41804	Nup93-2	Dmel_CG7262	NP_650404.1	796	nucleoporin 93kD-2
3R	NT_033777.3	14898753	14899583	+	41805	CG3817	Dmel_CG3817	NP_650405.2	276	CG3817
3R	NT_033777.3	14899639	14900277	-	41806	VhaPPA1-2	Dmel_CG7026	NP_650406.2	212	vacuolar 
3R	NT_033777.3	14900527	14901477	-	41807	RpS5b	Dmel_CG7014	NP_650407.1	230	ribosomal protein S5b, isoform A
3R	NT_033777.3	14900880	14901477	-	41807	RpS5b	Dmel_CG7014	NP_001247110.1	180	ribosomal protein S5b, isoform B
3R	NT_033777.3	14903234	14903872	-	45247	VhaPPA1-1	Dmel_CG7007	NP_652010.1	212	vacuolar 
3R	NT_033777.3	14903234	14903872	-	45247	VhaPPA1-1	Dmel_CG7007	NP_001247111.1	212	vacuolar 
3R	NT_033777.3	14918878	14921866	+	41809	Sdr	Dmel_CG3837	NP_650408.1	868	secreted decoy of InR, isoform A
3R	NT_033777.3	14918878	14921866	+	41809	Sdr	Dmel_CG3837	NP_001287331.1	868	secreted decoy of InR, isoform B
3R	NT_033777.3	15014770	15015864	+	41810	CG14861	Dmel_CG14861	NP_650409.1	364	uncharacterized protein Dmel_CG14861
3R	NT_033777.3	15037423	15038073	+	41811	RpL10Aa	Dmel_CG3843	NP_650410.1	216	ribosomal protein L10Aa
3R	NT_033777.3	15057184	15071824	-	2768670	dpr9	Dmel_CG33485	NP_001287332.1	602	defective proboscis extension response 9, isoform B
3R	NT_033777.3	15057184	15071824	-	2768670	dpr9	Dmel_CG33485	NP_996215.1	602	defective proboscis extension response 9, isoform A
3R	NT_033777.3	15078530	15079285	-	41815	CG6974	Dmel_CG6974	NP_650414.1	251	CG6974
3R	NT_033777.3	15081198	15094926	-	41816	CG6966	Dmel_CG6966	NP_001287333.1	664	CG6966, isoform C
3R	NT_033777.3	15081198	15094926	-	41816	CG6966	Dmel_CG6966	NP_001097796.1	664	CG6966, isoform B
3R	NT_033777.3	15097628	15112176	-	41817	CG42788	Dmel_CG42788	NP_001189222.1	1559	uncharacterized protein Dmel_CG42788, isoform C
3R	NT_033777.3	15097628	15112176	-	41817	CG42788	Dmel_CG42788	NP_731964.2	1560	uncharacterized protein Dmel_CG42788, isoform B
3R	NT_033777.3	15135185	15136925	-	41820	CG6912	Dmel_CG6912	NP_650419.1	433	CG6912
3R	NT_033777.3	15137162	15138904	+	41821	CG3984	Dmel_CG3984	NP_650420.1	537	CG3984
3R	NT_033777.3	15140047	15141536	+	41822	CG3987	Dmel_CG3987	NP_650421.3	404	CG3987
3R	NT_033777.3	15142203	15145377	-	41823	GlyS	Dmel_CG6904	NP_731967.2	709	glycogen synthase, isoform A
3R	NT_033777.3	15142203	15145239	-	41823	GlyS	Dmel_CG6904	NP_731968.1	689	glycogen synthase, isoform C
3R	NT_033777.3	15142203	15145239	-	41823	GlyS	Dmel_CG6904	NP_650422.1	689	glycogen synthase, isoform B
3R	NT_033777.3	15142203	15145239	-	41823	GlyS	Dmel_CG6904	NP_001262583.1	689	glycogen synthase, isoform D
3R	NT_033777.3	15171355	15179129	-	41824	Mf	Dmel_CG6803	NP_001247113.1	364	myofilin, isoform L
3R	NT_033777.3	15171355	15179129	-	41824	Mf	Dmel_CG6803	NP_731970.1	312	myofilin, isoform D
3R	NT_033777.3	15171355	15179129	-	41824	Mf	Dmel_CG6803	NP_001247114.1	364	myofilin, isoform M
3R	NT_033777.3	15171355	15179129	-	41824	Mf	Dmel_CG6803	NP_001262585.1	310	myofilin, isoform O
3R	NT_033777.3	15171355	15179129	-	41824	Mf	Dmel_CG6803	NP_731969.1	166	myofilin, isoform E
3R	NT_033777.3	15172084	15179129	-	41824	Mf	Dmel_CG6803	NP_001163613.1	313	myofilin, isoform J
3R	NT_033777.3	15172084	15179129	-	41824	Mf	Dmel_CG6803	NP_001163611.1	236	myofilin, isoform H
3R	NT_033777.3	15172084	15179129	-	41824	Mf	Dmel_CG6803	NP_001163609.1	313	myofilin, isoform F
3R	NT_033777.3	15172084	15179129	-	41824	Mf	Dmel_CG6803	NP_650423.1	365	myofilin, isoform B
3R	NT_033777.3	15173059	15179129	-	41824	Mf	Dmel_CG6803	NP_001163612.1	230	myofilin, isoform I
3R	NT_033777.3	15175850	15179129	-	41824	Mf	Dmel_CG6803	NP_731971.1	157	myofilin, isoform A
3R	NT_033777.3	15175850	15179129	-	41824	Mf	Dmel_CG6803	NP_001262584.1	157	myofilin, isoform N
3R	NT_033777.3	15175850	15179129	-	41824	Mf	Dmel_CG6803	NP_001163610.1	157	myofilin, isoform G
3R	NT_033777.3	15176158	15179129	-	41824	Mf	Dmel_CG6803	NP_001287335.1	168	myofilin, isoform Q
3R	NT_033777.3	15176158	15179129	-	41824	Mf	Dmel_CG6803	NP_731972.1	168	myofilin, isoform C
3R	NT_033777.3	15178221	15179129	-	41824	Mf	Dmel_CG6803	NP_001247112.1	119	myofilin, isoform K
3R	NT_033777.3	15178221	15179129	-	41824	Mf	Dmel_CG6803	NP_001287334.1	119	myofilin, isoform P
3R	NT_033777.3	15186080	15190166	+	41825	Gyc88E	Dmel_CG4154	NP_731974.4	1090	guanylyl cyclase at 88E, isoform F
3R	NT_033777.3	15186080	15190166	+	41825	Gyc88E	Dmel_CG4154	NP_001247115.1	1097	guanylyl cyclase at 88E, isoform E
3R	NT_033777.3	15186080	15190166	+	41825	Gyc88E	Dmel_CG4154	NP_001036711.1	1097	guanylyl cyclase at 88E, isoform D
3R	NT_033777.3	15191306	15196026	-	41826	CG6752	Dmel_CG6752	NP_001247116.1	1332	CG6752, isoform B
3R	NT_033777.3	15191306	15196026	-	41826	CG6752	Dmel_CG6752	NP_650425.1	1332	CG6752, isoform A
3R	NT_033777.3	15198971	15202445	+	8674000	CG42542	Dmel_CG42542	NP_001163614.1	503	uncharacterized protein Dmel_CG42542, isoform E
3R	NT_033777.3	15198971	15202445	+	8674000	CG42542	Dmel_CG42542	NP_001163616.1	323	uncharacterized protein Dmel_CG42542, isoform F
3R	NT_033777.3	15198971	15202445	+	8674000	CG42542	Dmel_CG42542	NP_650426.1	323	uncharacterized protein Dmel_CG42542, isoform B
3R	NT_033777.3	15198971	15202445	+	8674000	CG42542	Dmel_CG42542	NP_731978.1	323	uncharacterized protein Dmel_CG42542, isoform C
3R	NT_033777.3	15198971	15202445	+	8674000	CG42542	Dmel_CG42542	NP_001163615.1	503	uncharacterized protein Dmel_CG42542, isoform D
3R	NT_033777.3	15200644	15202445	+	8674000	CG42542	Dmel_CG42542	NP_731979.2	313	uncharacterized protein Dmel_CG42542, isoform G
3R	NT_033777.3	15203193	15204536	-	49804	Spn88Ea	Dmel_CG18525	NP_788678.1	427	serpin 88Ea, isoform B
3R	NT_033777.3	15203193	15204536	-	49804	Spn88Ea	Dmel_CG18525	NP_524954.2	427	serpin 88Ea, isoform A
3R	NT_033777.3	15206762	15208104	-	41829	Spn88Eb	Dmel_CG6687	NP_650427.1	426	serpin 88Eb
3R	NT_033777.3	15209300	15211256	+	41830	Mau2	Dmel_CG4203	NP_650428.1	632	Mau2 sister chromatid cohesion factor
3R	NT_033777.3	15211546	15213585	-	41831	CG6654	Dmel_CG6654	NP_650429.1	639	CG6654
3R	NT_033777.3	15214033	15214747	+	41832	CG4210	Dmel_CG4210	NP_650430.1	174	CG4210
3R	NT_033777.3	15214861	15218777	-	41833	SIDL	Dmel_CG6623	NP_650431.1	1145	shal interactor of Di-Leucine motif
3R	NT_033777.3	15219411	15221955	+	41834	CG12241	Dmel_CG12241	NP_650432.1	804	uncharacterized protein Dmel_CG12241
3R	NT_033777.3	15222400	15223092	-	261631	Rpb7	Dmel_CG31155	NP_731983.1	173	Rpb7
3R	NT_033777.3	15223433	15225146	-	41835	CG31344	Dmel_CG31344	NP_650433.1	403	uncharacterized protein Dmel_CG31344
3R	NT_033777.3	15225893	15227346	+	41836	Caf1-55	Dmel_CG4236	NP_524354.1	430	chromatin assembly factor 1, p55 subunit, isoform A
3R	NT_033777.3	15225893	15227346	+	41836	Caf1-55	Dmel_CG4236	NP_001163617.1	429	chromatin assembly factor 1, p55 subunit, isoform B
3R	NT_033777.3	15227651	15229265	-	41837	Art3	Dmel_CG6563	NP_650434.1	516	arginine methyltransferase 3, isoform A
3R	NT_033777.3	15227651	15229075	-	41837	Art3	Dmel_CG6563	NP_731984.1	474	arginine methyltransferase 3, isoform B
3R	NT_033777.3	15229732	15230352	+	41838	mRpS10	Dmel_CG4247	NP_731985.2	163	mitochondrial ribosomal protein S10, isoform A
3R	NT_033777.3	15229762	15230352	+	41838	mRpS10	Dmel_CG4247	NP_524355.2	173	mitochondrial ribosomal protein S10, isoform B
3R	NT_033777.3	15230618	15231616	+	5740757	CG34316	Dmel_CG34316	NP_001097798.1	267	uncharacterized protein Dmel_CG34316
3R	NT_033777.3	15232289	15242143	-	41839	tefu	Dmel_CG6535	NP_001036712.1	2767	telomere fusion
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_524356.1	651	heat shock protein cognate 4, isoform A
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_731989.1	651	heat shock protein cognate 4, isoform D
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_731987.1	651	heat shock protein cognate 4, isoform B
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_788680.1	651	heat shock protein cognate 4, isoform F
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_788679.1	651	heat shock protein cognate 4, isoform E
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_001262586.1	651	heat shock protein cognate 4, isoform G
3R	NT_033777.3	15244360	15246315	+	41840	Hsc70-4	Dmel_CG4264	NP_731988.1	651	heat shock protein cognate 4, isoform C
3R	NT_033777.3	15247247	15249137	-	41841	Amt	Dmel_CG6499	NP_001097800.1	562	ammonium transporter
3R	NT_033777.3	15250117	15252206	+	41842	CG42404	Dmel_CG42404	NP_001036713.2	105	uncharacterized protein Dmel_CG42404, isoform F
3R	NT_033777.3	15250117	15255667	+	41842	CG42404	Dmel_CG42404	NP_650437.4	1133	uncharacterized protein Dmel_CG42404, isoform D
3R	NT_033777.3	15250117	15255667	+	41842	CG42404	Dmel_CG42404	NP_001247118.1	1133	uncharacterized protein Dmel_CG42404, isoform E
3R	NT_033777.3	15258367	15263347	-	41843	eIF-2gamma	Dmel_CG43665	NP_731993.1	475	eukaryotic initiation factor 2gamma, isoform B
3R	NT_033777.3	15258367	15262838	-	41843	eIF-2gamma	Dmel_CG43665	NP_731994.1	467	eukaryotic initiation factor 2gamma, isoform C
3R	NT_033777.3	15258367	15263347	-	41843	eIF-2gamma	Dmel_CG43665	NP_001262587.1	475	eukaryotic initiation factor 2gamma, isoform D
3R	NT_033777.3	15260231	15263347	-	41483	Su(var)3-9	Dmel_CG43664	NP_524357.2	635	suppressor of variegation 3-9
3R	NT_033777.3	15263687	15265029	+	41844	Set	Dmel_CG4299	NP_650438.2	269	Set
3R	NT_033777.3	15265661	15266588	+	41845	ATPsynO	Dmel_CG4307	NP_524358.2	209	ATP synthase, oligomycin sensitivity conferring protein
3R	NT_033777.3	15266729	15268372	-	41846	CG14864	Dmel_CG14864	NP_650439.1	547	uncharacterized protein Dmel_CG14864, isoform A
3R	NT_033777.3	15266729	15268309	-	41846	CG14864	Dmel_CG14864	NP_001036714.1	526	uncharacterized protein Dmel_CG14864, isoform B
3R	NT_033777.3	15268763	15270195	+	41847	Zip88E	Dmel_CG4334	NP_650440.2	366	Zinc/iron regulated transporter-related protein 88E
3R	NT_033777.3	15271043	15274516	-	41848	Cp190	Dmel_CG6384	NP_731998.1	1096	centrosomal protein 190kD, isoform B
3R	NT_033777.3	15271043	15274516	-	41848	Cp190	Dmel_CG6384	NP_524359.2	1096	centrosomal protein 190kD, isoform A
3R	NT_033777.3	15275614	15276438	+	41849	CG4338	Dmel_CG4338	NP_650441.1	274	CG4338
3R	NT_033777.3	15276585	15278033	-	41850	MRG15	Dmel_CG6363	NP_650442.1	424	MORF-related gene 15, isoform A
3R	NT_033777.3	15276585	15278033	-	41850	MRG15	Dmel_CG6363	NP_001262588.1	429	MORF-related gene 15, isoform B
3R	NT_033777.3	15278243	15278549	-	41851	l(3)neo43	Dmel_CG14865	NP_001262589.1	81	lethal (3) neo43, isoform C
3R	NT_033777.3	15278243	15278549	-	41851	l(3)neo43	Dmel_CG14865	NP_650443.2	81	lethal (3) neo43, isoform B
3R	NT_033777.3	15284649	15303723	+	41852	Tm1	Dmel_CG4898	NP_996216.1	284	tropomyosin 1, isoform L
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_001262591.1	285	tropomyosin 1, isoform S
3R	NT_033777.3	15284649	15305911	+	41852	Tm1	Dmel_CG4898	NP_732005.2	501	tropomyosin 1, isoform F
3R	NT_033777.3	15284649	15295358	+	41852	Tm1	Dmel_CG4898	NP_001247119.1	161	tropomyosin 1, isoform P
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_732002.1	285	tropomyosin 1, isoform M
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_732001.3	285	tropomyosin 1, isoform O
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_732004.1	285	tropomyosin 1, isoform J
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_732003.1	285	tropomyosin 1, isoform G
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_001163619.1	285	tropomyosin 1, isoform N
3R	NT_033777.3	15284649	15307675	+	41852	Tm1	Dmel_CG4898	NP_732006.2	711	tropomyosin 1, isoform E
3R	NT_033777.3	15284649	15307125	+	41852	Tm1	Dmel_CG4898	NP_996217.1	518	tropomyosin 1, isoform K
3R	NT_033777.3	15287455	15296939	+	41852	Tm1	Dmel_CG4898	NP_732007.2	678	tropomyosin 1, isoform H
3R	NT_033777.3	15288597	15296939	+	41852	Tm1	Dmel_CG4898	NP_732009.2	441	tropomyosin 1, isoform I
3R	NT_033777.3	15288597	15296939	+	41852	Tm1	Dmel_CG4898	NP_732008.1	441	tropomyosin 1, isoform C
3R	NT_033777.3	15290335	15290643	-	19836177	CG45218	Dmel_CG45218	NP_001287336.1	84	uncharacterized protein Dmel_CG45218
3R	NT_033777.3	15291382	15303723	+	41852	Tm1	Dmel_CG4898	NP_524360.2	252	tropomyosin 1, isoform A
3R	NT_033777.3	15291382	15308107	+	41852	Tm1	Dmel_CG4898	NP_001262590.1	250	tropomyosin 1, isoform R
3R	NT_033777.3	15291382	15308107	+	41852	Tm1	Dmel_CG4898	NP_001247120.1	250	tropomyosin 1, isoform Q
3R	NT_033777.3	15312453	15314610	+	41853	Tm2	Dmel_CG4843	NP_001262592.1	284	tropomyosin 2, isoform F
3R	NT_033777.3	15312453	15314610	+	41853	Tm2	Dmel_CG4843	NP_524361.4	284	tropomyosin 2, isoform A
3R	NT_033777.3	15312453	15314610	+	41853	Tm2	Dmel_CG4843	NP_732012.1	284	tropomyosin 2, isoform B
3R	NT_033777.3	15312453	15314610	+	41853	Tm2	Dmel_CG4843	NP_001287337.1	284	tropomyosin 2, isoform G
3R	NT_033777.3	15312453	15314610	+	41853	Tm2	Dmel_CG4843	NP_001262593.1	284	tropomyosin 2, isoform E
3R	NT_033777.3	15312453	15313673	+	41853	Tm2	Dmel_CG4843	NP_732013.2	284	tropomyosin 2, isoform C
3R	NT_033777.3	15316643	15318138	+	41854	CG14866	Dmel_CG14866	NP_001138057.1	455	uncharacterized protein Dmel_CG14866, isoform B
3R	NT_033777.3	15316946	15318138	+	41854	CG14866	Dmel_CG14866	NP_650444.1	378	uncharacterized protein Dmel_CG14866, isoform A
3R	NT_033777.3	15318440	15319913	-	41855	CG6276	Dmel_CG6276	NP_650445.3	470	CG6276
3R	NT_033777.3	15320425	15320607	+	14462475	CG44040	Dmel_CG44040	NP_001262594.1	60	uncharacterized protein Dmel_CG44040
3R	NT_033777.3	15321418	15324326	+	44451	ear	Dmel_CG4913	NP_001262595.1	945	ENL/AF9-related, isoform B
3R	NT_033777.3	15321418	15324284	+	44451	ear	Dmel_CG4913	NP_651979.1	931	ENL/AF9-related, isoform A
3R	NT_033777.3	15321418	15324284	+	44451	ear	Dmel_CG4913	NP_001262596.1	931	ENL/AF9-related, isoform C
3R	NT_033777.3	15325539	15328045	-	41857	CG6236	Dmel_CG6236	NP_732014.2	680	CG6236, isoform B
3R	NT_033777.3	15325539	15328045	-	41857	CG6236	Dmel_CG6236	NP_650446.2	680	CG6236, isoform A
3R	NT_033777.3	15328933	15330361	+	41858	ea	Dmel_CG4920	NP_524362.2	392	easter, isoform A
3R	NT_033777.3	15329512	15330361	+	41858	ea	Dmel_CG4920	NP_001262597.1	261	easter, isoform B
3R	NT_033777.3	15330754	15331557	+	41859	mRpL9	Dmel_CG31478	NP_524363.3	248	mitochondrial ribosomal protein L9
3R	NT_033777.3	15331704	15333028	-	41860	FK506-bp1	Dmel_CG6226	NP_524364.2	357	FK506-binding protein 1
3R	NT_033777.3	15333389	15337736	+	41861	Sra-1	Dmel_CG4931	NP_650447.1	1291	specifically Rac1-associated protein 1
3R	NT_033777.3	15338584	15342314	-	41863	CG6218	Dmel_CG6218	NP_650448.1	348	CG6218, isoform A
3R	NT_033777.3	15338584	15342314	-	41863	CG6218	Dmel_CG6218	NP_001262598.1	348	CG6218, isoform B
3R	NT_033777.3	15340836	15342089	+	41862	SerRS-m	Dmel_CG4938	NP_001262599.1	417	Seryl-tRNA synthetase, mitochondrial, isoform B
3R	NT_033777.3	15340836	15342089	+	41862	SerRS-m	Dmel_CG4938	NP_524365.1	417	Seryl-tRNA synthetase, mitochondrial, isoform A
3R	NT_033777.3	15344264	15345959	-	41864	Surf4	Dmel_CG6202	NP_477222.1	270	surfeit 4
3R	NT_033777.3	15346305	15347912	+	41865	CG31301	Dmel_CG31301	NP_650449.1	439	uncharacterized protein Dmel_CG31301
3R	NT_033777.3	15348119	15349503	+	318709	CG42726	Dmel_CG42726	NP_732017.3	441	uncharacterized protein Dmel_CG42726
3R	NT_033777.3	15349703	15350338	+	318709	CG42726	Dmel_CG42726	NP_001189223.1	211	uncharacterized protein Dmel_CG42727
3R	NT_033777.3	15350394	15350920	-	41866	Trs33	Dmel_CG6196	NP_650450.1	152	TRAPP subunit 33
3R	NT_033777.3	15351351	15353468	+	41867	CG5038	Dmel_CG5038	NP_650451.1	705	CG5038
3R	NT_033777.3	15354270	15356628	-	41868	Atg4b	Dmel_CG6194	NP_650452.1	668	Autophagy-related 4b
3R	NT_033777.3	15357318	15358811	+	41869	CG5044	Dmel_CG5044	NP_650453.3	385	CG5044, isoform A
3R	NT_033777.3	15357318	15358811	+	41869	CG5044	Dmel_CG5044	NP_732020.2	386	CG5044, isoform B
3R	NT_033777.3	15359283	15361577	-	41870	ldlCp	Dmel_CG6177	NP_524366.1	710	ldlCp-related protein
3R	NT_033777.3	15361825	15362771	+	41871	Trax	Dmel_CG5063	NP_732021.2	298	translin associated factor X, isoform B
3R	NT_033777.3	15361825	15362771	+	41871	Trax	Dmel_CG5063	NP_650454.2	298	translin associated factor X, isoform C
3R	NT_033777.3	15362886	15363768	-	41872	CG6171	Dmel_CG6171	NP_001097801.1	255	CG6171, isoform B
3R	NT_033777.3	15363144	15363768	-	41872	CG6171	Dmel_CG6171	NP_650455.1	187	CG6171, isoform A
3R	NT_033777.3	15364444	15366696	-	41873	CG34404	Dmel_CG34404	NP_732023.1	630	uncharacterized protein Dmel_CG34404, isoform D
3R	NT_033777.3	15364444	15366434	-	41873	CG34404	Dmel_CG34404	NP_650456.2	565	uncharacterized protein Dmel_CG34404, isoform E
3R	NT_033777.3	15364444	15367434	-	41873	CG34404	Dmel_CG34404	NP_650457.2	715	uncharacterized protein Dmel_CG34404, isoform C
3R	NT_033777.3	15367936	15369778	-	41875	CG14868	Dmel_CG14868	NP_650458.1	518	uncharacterized protein Dmel_CG14868
3R	NT_033777.3	15371022	15371813	-	41877	CG6136	Dmel_CG6136	NP_650460.1	263	CG6136, isoform C
3R	NT_033777.3	15371022	15371813	-	41877	CG6136	Dmel_CG6136	NP_001262600.1	263	CG6136, isoform D
3R	NT_033777.3	15371022	15371813	-	41877	CG6136	Dmel_CG6136	NP_001189224.1	263	CG6136, isoform B
3R	NT_033777.3	15372152	15373470	+	41876	Ccm3	Dmel_CG5073	NP_650459.1	208	cerebral cavernous malformation 3
3R	NT_033777.3	15374862	15399895	+	41880	Rbp	Dmel_CG43073	NP_001189226.1	1817	RIM-binding protein, isoform G
3R	NT_033777.3	15374862	15399895	+	41880	Rbp	Dmel_CG43073	NP_001189227.1	1844	RIM-binding protein, isoform F
3R	NT_033777.3	15381185	15399135	+	41880	Rbp	Dmel_CG43073	NP_732030.4	1487	RIM-binding protein, isoform L
3R	NT_033777.3	15381185	15399895	+	41880	Rbp	Dmel_CG43073	NP_001262601.1	1799	RIM-binding protein, isoform I
3R	NT_033777.3	15381185	15399895	+	41880	Rbp	Dmel_CG43073	NP_001163620.3	1791	RIM-binding protein, isoform N
3R	NT_033777.3	15381185	15399895	+	41880	Rbp	Dmel_CG43073	NP_001262602.1	1763	RIM-binding protein, isoform J
3R	NT_033777.3	15381185	15399895	+	41880	Rbp	Dmel_CG43073	NP_732028.4	1748	RIM-binding protein, isoform K
3R	NT_033777.3	15381185	15399895	+	41880	Rbp	Dmel_CG43073	NP_001303508.1	1765	RIM-binding protein, isoform M
3R	NT_033777.3	15381185	15399135	+	41880	Rbp	Dmel_CG43073	NP_732029.4	1473	RIM-binding protein, isoform O
3R	NT_033777.3	15382099	15382869	-	41879	h-cup	Dmel_CG6130	NP_650462.1	256	heineken-cup
3R	NT_033777.3	15403029	15405497	-	41882	CG6125	Dmel_CG6125	NP_732032.1	640	CG6125, isoform A
3R	NT_033777.3	15403029	15406931	-	41882	CG6125	Dmel_CG6125	NP_650465.1	611	CG6125, isoform B
3R	NT_033777.3	15403029	15406931	-	41882	CG6125	Dmel_CG6125	NP_001287338.1	611	CG6125, isoform C
3R	NT_033777.3	15409125	15415552	+	41883	Atx2	Dmel_CG5166	NP_732033.1	1084	Ataxin-2, isoform B
3R	NT_033777.3	15412239	15415018	+	41883	Atx2	Dmel_CG5166	NP_650466.2	888	Ataxin-2, isoform A
3R	NT_033777.3	15412239	15415552	+	41883	Atx2	Dmel_CG5166	NP_001287339.1	1023	Ataxin-2, isoform D
3R	NT_033777.3	15412239	15415552	+	41883	Atx2	Dmel_CG5166	NP_732034.2	1023	Ataxin-2, isoform C
3R	NT_033777.3	15422155	15434184	-	41884	CG6118	Dmel_CG6118	NP_001097806.1	967	CG6118, isoform C
3R	NT_033777.3	15422155	15425010	-	41884	CG6118	Dmel_CG6118	NP_001097805.1	883	CG6118, isoform B
3R	NT_033777.3	15422155	15434184	-	41884	CG6118	Dmel_CG6118	NP_650467.2	966	CG6118, isoform D
3R	NT_033777.3	15440616	15441807	+	41885	Act88F	Dmel_CG5178	NP_524367.1	376	actin 88F
3R	NT_033777.3	15443239	15449694	-	41887	AdamTS-A	Dmel_CG14869	NP_732036.2	1537	ADAM metallopeptidase with thrombospondin type 1 motif A, isoform E
3R	NT_033777.3	15443239	15463096	-	41887	AdamTS-A	Dmel_CG14869	NP_001262604.1	1585	ADAM metallopeptidase with thrombospondin type 1 motif A, isoform C
3R	NT_033777.3	15443239	15475288	-	41887	AdamTS-A	Dmel_CG14869	NP_996218.1	1688	ADAM metallopeptidase with thrombospondin type 1 motif A, isoform B
3R	NT_033777.3	15482007	15482850	+	41888	B9d1	Dmel_CG14870	NP_650470.1	241	B9d1
3R	NT_033777.3	15483296	15484519	+	41889	Rh6	Dmel_CG5192	NP_524368.4	362	rhodopsin 6
3R	NT_033777.3	15484894	15485336	-	41890	Trissin	Dmel_CG14871	NP_650471.2	108	trissin
3R	NT_033777.3	15486143	15492985	+	41891	obe	Dmel_CG5205	NP_650472.2	2183	obelus
3R	NT_033777.3	15494802	15495557	+	41892	CG5213	Dmel_CG5213	NP_650473.1	251	CG5213
3R	NT_033777.3	15508059	15508819	-	41893	CG44014	Dmel_CG44014	NP_732043.1	219	uncharacterized protein Dmel_CG44014
3R	NT_033777.3	15509158	15509899	-	14462476	CG44013	Dmel_CG44013	NP_001262606.1	219	uncharacterized protein Dmel_CG44013, isoform C
3R	NT_033777.3	15509158	15509899	-	14462476	CG44013	Dmel_CG44013	NP_001262607.1	219	uncharacterized protein Dmel_CG44013, isoform B
3R	NT_033777.3	15530517	15531473	-	318668	CG31296	Dmel_CG31296	NP_001262608.1	280	uncharacterized protein Dmel_CG31296, isoform B
3R	NT_033777.3	15530517	15531473	-	318668	CG31296	Dmel_CG31296	NP_732044.2	280	uncharacterized protein Dmel_CG31296, isoform A
3R	NT_033777.3	15532326	15537075	-	41894	AOX1	Dmel_CG18522	NP_650475.1	1273	aldehyde oxidase 1
3R	NT_033777.3	15537843	15542389	-	41895	AOX2	Dmel_CG18519	NP_732047.2	1264	aldehyde oxidase 2
3R	NT_033777.3	15542870	15547394	-	41896	AOX3	Dmel_CG6045	NP_001303439.1	1254	aldehyde oxidase 3, isoform B
3R	NT_033777.3	15542870	15547394	-	41896	AOX3	Dmel_CG6045	NP_650477.1	1254	aldehyde oxidase 3, isoform A
3R	NT_033777.3	15548628	15552772	-	41897	AOX4	Dmel_CG18516	NP_650478.1	1256	aldehyde oxidase 4
3R	NT_033777.3	15635468	15636489	+	12798413	CG43335	Dmel_CG43335	NP_001247121.1	281	uncharacterized protein Dmel_CG43335
3R	NT_033777.3	15637168	15638181	+	12798414	CG43336	Dmel_CG43336	NP_001247122.1	279	uncharacterized protein Dmel_CG43336
3R	NT_033777.3	15671959	15687936	+	41899	pxb	Dmel_CG33207	NP_788681.1	636	pxb, isoform B
3R	NT_033777.3	15671959	15687936	+	41899	pxb	Dmel_CG33207	NP_001262609.1	636	pxb, isoform C
3R	NT_033777.3	15693130	15694068	+	318741	CG31446	Dmel_CG31446	NP_001262610.1	237	uncharacterized protein Dmel_CG31446, isoform B
3R	NT_033777.3	15693130	15694068	+	318741	CG31446	Dmel_CG31446	NP_732053.1	232	uncharacterized protein Dmel_CG31446, isoform A
3R	NT_033777.3	15695334	15696346	+	41900	CG5399	Dmel_CG5399	NP_001262611.1	218	CG5399, isoform B
3R	NT_033777.3	15695334	15696346	+	41900	CG5399	Dmel_CG5399	NP_650481.1	218	CG5399, isoform A
3R	NT_033777.3	15704754	15707634	+	41901	CG5404	Dmel_CG5404	NP_650482.1	627	CG5404
3R	NT_033777.3	15715612	15716493	-	318666	CG31294	Dmel_CG31294	NP_732055.1	225	uncharacterized protein Dmel_CG31294
3R	NT_033777.3	15731787	15732649	+	5740212	CG34274	Dmel_CG34274	NP_001097807.1	250	uncharacterized protein Dmel_CG34274
3R	NT_033777.3	15744788	15745949	+	41902	CG4520	Dmel_CG4520	NP_001287340.1	320	CG4520, isoform B
3R	NT_033777.3	15744788	15745949	+	41902	CG4520	Dmel_CG4520	NP_650483.1	320	CG4520, isoform A
3R	NT_033777.3	15763169	15763474	+	41903	CG12784	Dmel_CG12784	NP_650484.1	101	uncharacterized protein Dmel_CG12784
3R	NT_033777.3	15766478	15767383	-	41904	CG5623	Dmel_CG5623	NP_650485.1	279	CG5623
3R	NT_033777.3	15774496	15777552	+	41905	CG4525	Dmel_CG4525	NP_650486.1	570	CG4525
3R	NT_033777.3	15779910	15780986	+	41906	CG5614	Dmel_CG5614	NP_650487.1	358	CG5614
3R	NT_033777.3	15786764	15788205	+	41907	CG9590	Dmel_CG9590	NP_650488.1	460	CG9590
3R	NT_033777.3	15788604	15789365	+	41908	CG9589	Dmel_CG9589	NP_650489.1	253	CG9589
3R	NT_033777.3	15789788	15792442	-	47765	c(3)G	Dmel_CG17604	NP_732066.1	744	crossover suppressor on 3 of gowen, isoform C
3R	NT_033777.3	15789788	15792442	-	47765	c(3)G	Dmel_CG17604	NP_732065.1	744	crossover suppressor on 3 of gowen, isoform B
3R	NT_033777.3	15789788	15792442	-	47765	c(3)G	Dmel_CG17604	NP_650490.1	744	crossover suppressor on 3 of gowen, isoform A
3R	NT_033777.3	15792835	15793324	+	41910	Acyp2	Dmel_CG18505	NP_650491.1	102	acylphosphatase 2, isoform A
3R	NT_033777.3	15792835	15793324	+	41910	Acyp2	Dmel_CG18505	NP_001262612.1	102	acylphosphatase 2, isoform B
3R	NT_033777.3	15794907	15798862	+	41911	nsl1	Dmel_CG4699	NP_001247124.1	981	non-specific lethal 1, isoform L
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001247126.1	1551	non-specific lethal 1, isoform O
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001262613.1	1549	non-specific lethal 1, isoform P
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001163623.1	1550	non-specific lethal 1, isoform H
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001163621.1	1550	non-specific lethal 1, isoform D
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001247125.1	1569	non-specific lethal 1, isoform N
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_732069.3	1570	non-specific lethal 1, isoform M
3R	NT_033777.3	15794907	15798481	+	41911	nsl1	Dmel_CG4699	NP_001163624.1	936	non-specific lethal 1, isoform J
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_732070.2	1550	non-specific lethal 1, isoform I
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_001163622.1	1549	non-specific lethal 1, isoform E
3R	NT_033777.3	15794907	15798862	+	41911	nsl1	Dmel_CG4699	NP_001247123.1	982	non-specific lethal 1, isoform K
3R	NT_033777.3	15794907	15801021	+	41911	nsl1	Dmel_CG4699	NP_650492.2	1548	non-specific lethal 1, isoform F
3R	NT_033777.3	15802282	15803539	+	41912	CG9593	Dmel_CG9593	NP_650493.2	382	CG9593
3R	NT_033777.3	15819011	15822937	+	41913	alpha-Man-IIb	Dmel_CG4606	NP_650494.2	1249	alpha-Mannosidase class II b, isoform A
3R	NT_033777.3	15819011	15822937	+	41913	alpha-Man-IIb	Dmel_CG4606	NP_001287341.1	1249	alpha-Mannosidase class II b, isoform C
3R	NT_033777.3	15819011	15822937	+	41913	alpha-Man-IIb	Dmel_CG4606	NP_001262614.1	1249	alpha-Mannosidase class II b, isoform B
3R	NT_033777.3	15824477	15832617	-	49241	rec	Dmel_CG31293	NP_001262615.1	885	recombination-defective, isoform B
3R	NT_033777.3	15824477	15832617	-	49241	rec	Dmel_CG31293	NP_732072.1	885	recombination-defective, isoform A
3R	NT_033777.3	15826097	15830269	+	41914	CG4576	Dmel_CG4576	NP_650495.1	676	CG4576
3R	NT_033777.3	15832768	15833393	-	12798422	CG43318	Dmel_CG43318	NP_001247127.1	172	uncharacterized protein Dmel_CG43318
3R	NT_033777.3	15833524	15834365	-	41916	CG43317	Dmel_CG43317	NP_001138058.1	246	uncharacterized protein Dmel_CG43317
3R	NT_033777.3	15834766	15835550	+	41917	Arpc3A	Dmel_CG4560	NP_650498.3	177	Actin-related protein 2/3 complex, subunit 3A, isoform C
3R	NT_033777.3	15834766	15835550	+	41917	Arpc3A	Dmel_CG4560	NP_732075.3	177	Actin-related protein 2/3 complex, subunit 3A, isoform E
3R	NT_033777.3	15836125	15837029	-	44207	ND-23	Dmel_CG3944	NP_524719.1	217	NADH dehydrogenase (ubiquinone) 23 kDa subunit
3R	NT_033777.3	15837483	15844106	+	41919	spn-E	Dmel_CG3158	NP_476741.1	1434	spindle E
3R	NT_033777.3	15838321	15839412	-	41920	Pbp45	Dmel_CG9597	NP_650499.1	363	PSEA-binding protein 45kD
3R	NT_033777.3	15844524	15853308	-	41921	cv-d	Dmel_CG31150	NP_732076.1	1470	crossveinless d
3R	NT_033777.3	15846780	15848283	+	41922	CG4546	Dmel_CG4546	NP_650501.1	457	CG4546
3R	NT_033777.3	15854096	15856937	-	41925	Hmt-1	Dmel_CG4225	NP_650503.1	866	heavy metal tolerance factor 1
3R	NT_033777.3	15858331	15870052	-	41927	CG31183	Dmel_CG31183	NP_001287342.1	1417	uncharacterized protein Dmel_CG31183, isoform B
3R	NT_033777.3	15858331	15870052	-	41927	CG31183	Dmel_CG31183	NP_650505.2	1417	uncharacterized protein Dmel_CG31183, isoform A
3R	NT_033777.3	15860348	15861004	+	41926	CG9632	Dmel_CG9632	NP_732079.1	162	CG9632, isoform B
3R	NT_033777.3	15860348	15861004	+	41926	CG9632	Dmel_CG9632	NP_650504.1	218	CG9632, isoform A
3R	NT_033777.3	15889194	15890115	-	41929	CG14877	Dmel_CG14877	NP_650507.1	254	uncharacterized protein Dmel_CG14877
3R	NT_033777.3	15897283	15897933	-	41930	glob1	Dmel_CG9734	NP_732083.1	153	globin 1, isoform D
3R	NT_033777.3	15897283	15897933	-	41930	glob1	Dmel_CG9734	NP_001287343.1	153	globin 1, isoform F
3R	NT_033777.3	15897283	15897933	-	41930	glob1	Dmel_CG9734	NP_524369.1	153	globin 1, isoform B
3R	NT_033777.3	15897283	15897933	-	41930	glob1	Dmel_CG9734	NP_732082.1	153	globin 1, isoform C
3R	NT_033777.3	15897283	15897933	-	41930	glob1	Dmel_CG9734	NP_732081.1	153	globin 1, isoform A
3R	NT_033777.3	15897730	15897933	-	41930	glob1	Dmel_CG9734	NP_001163625.1	67	globin 1, isoform E
3R	NT_033777.3	15908593	15909886	+	41931	CG3303	Dmel_CG3303	NP_650508.1	322	CG3303
3R	NT_033777.3	15910487	15916606	-	41932	CG45105	Dmel_CG45105	NP_732086.1	1052	uncharacterized protein Dmel_CG45105, isoform B
3R	NT_033777.3	15910487	15916606	-	41932	CG45105	Dmel_CG45105	NP_001287346.1	1093	uncharacterized protein Dmel_CG45105, isoform F
3R	NT_033777.3	15910487	15917804	-	41932	CG45105	Dmel_CG45105	NP_732085.1	1138	uncharacterized protein Dmel_CG45105, isoform C
3R	NT_033777.3	15910764	15916606	-	41932	CG45105	Dmel_CG45105	NP_001097808.1	990	uncharacterized protein Dmel_CG45105, isoform D
3R	NT_033777.3	15912139	15916606	-	41932	CG45105	Dmel_CG45105	NP_001287348.1	568	uncharacterized protein Dmel_CG45105, isoform I
3R	NT_033777.3	15912705	15916606	-	41932	CG45105	Dmel_CG45105	NP_001287344.1	973	uncharacterized protein Dmel_CG45105, isoform E
3R	NT_033777.3	15912705	15916606	-	41932	CG45105	Dmel_CG45105	NP_001287345.1	973	uncharacterized protein Dmel_CG45105, isoform G
3R	NT_033777.3	15913837	15917804	-	41932	CG45105	Dmel_CG45105	NP_001287347.1	721	uncharacterized protein Dmel_CG45105, isoform H
3R	NT_033777.3	15926239	15926584	+	41934	CG34276	Dmel_CG34276	NP_001262616.1	91	uncharacterized protein Dmel_CG34276, isoform B
3R	NT_033777.3	15926239	15926584	+	41934	CG34276	Dmel_CG34276	NP_001097810.1	91	uncharacterized protein Dmel_CG34276, isoform A
3R	NT_033777.3	15929976	15932503	+	41935	Fbxl7	Dmel_CG4221	NP_650512.1	772	F-box and leucine-rich repeat protein 7
3R	NT_033777.3	15932895	15933686	-	41936	CG5478	Dmel_CG5478	NP_650513.1	263	CG5478
3R	NT_033777.3	15934152	15934637	+	41937	blp	Dmel_CG5268	NP_524370.2	141	black pearl, isoform A
3R	NT_033777.3	15934152	15934637	+	41937	blp	Dmel_CG5268	NP_001287349.1	141	black pearl, isoform B
3R	NT_033777.3	15936126	15956884	+	41938	Sap47	Dmel_CG8884	NP_732094.1	374	Synapse-associated protein 47kD, isoform B
3R	NT_033777.3	15936126	15956884	+	41938	Sap47	Dmel_CG8884	NP_524371.1	351	Synapse-associated protein 47kD, isoform F
3R	NT_033777.3	15936126	15957598	+	41938	Sap47	Dmel_CG8884	NP_001287350.1	347	Synapse-associated protein 47kD, isoform K
3R	NT_033777.3	15936126	15959552	+	41938	Sap47	Dmel_CG8884	NP_732093.1	535	Synapse-associated protein 47kD, isoform G
3R	NT_033777.3	15936126	15959552	+	41938	Sap47	Dmel_CG8884	NP_732090.1	551	Synapse-associated protein 47kD, isoform D
3R	NT_033777.3	15936126	15959552	+	41938	Sap47	Dmel_CG8884	NP_732088.1	551	Synapse-associated protein 47kD, isoform A
3R	NT_033777.3	15936126	15959552	+	41938	Sap47	Dmel_CG8884	NP_732089.1	551	Synapse-associated protein 47kD, isoform C
3R	NT_033777.3	15936126	15957598	+	41938	Sap47	Dmel_CG8884	NP_001262617.1	344	Synapse-associated protein 47kD, isoform J
3R	NT_033777.3	15936126	15957598	+	41938	Sap47	Dmel_CG8884	NP_732092.2	347	Synapse-associated protein 47kD, isoform I
3R	NT_033777.3	15936126	15959552	+	41938	Sap47	Dmel_CG8884	NP_732091.1	551	Synapse-associated protein 47kD, isoform E
3R	NT_033777.3	15950258	15950851	-	318590	CG31088	Dmel_CG31088	NP_732095.1	133	uncharacterized protein Dmel_CG31088
3R	NT_033777.3	15962538	15963539	-	41939	CG4287	Dmel_CG4287	NP_650514.1	333	CG4287, isoform A
3R	NT_033777.3	15962538	15963539	-	41939	CG4287	Dmel_CG4287	NP_001163626.1	333	CG4287, isoform B
3R	NT_033777.3	15964051	15964648	+	41940	CG5516	Dmel_CG5516	NP_001189228.1	176	CG5516, isoform B
3R	NT_033777.3	15964051	15964648	+	41940	CG5516	Dmel_CG5516	NP_650515.1	176	CG5516, isoform A
3R	NT_033777.3	15964807	15965184	-	318251	CG32856	Dmel_CG32856	NP_001189229.1	107	uncharacterized protein Dmel_CG32856, isoform B
3R	NT_033777.3	15964807	15965184	-	318251	CG32856	Dmel_CG32856	NP_732096.1	107	uncharacterized protein Dmel_CG32856, isoform A
3R	NT_033777.3	15965606	15967957	+	41941	Rbf2	Dmel_CG5083	NP_524372.1	783	Retinoblastoma-family protein 2
3R	NT_033777.3	15968386	15972812	-	41942	mor	Dmel_CG18740	NP_001189230.1	1145	moira, isoform B
3R	NT_033777.3	15968386	15972812	-	41942	mor	Dmel_CG18740	NP_524373.1	1209	moira, isoform A
3R	NT_033777.3	15977233	15983325	+	41943	Hel89B	Dmel_CG4261	NP_001287351.1	1923	helicase 89B, isoform C
3R	NT_033777.3	15977233	15983325	+	41943	Hel89B	Dmel_CG4261	NP_732097.2	1923	helicase 89B, isoform B
3R	NT_033777.3	15994226	16003503	+	41944	srp	Dmel_CG3992	NP_732098.1	1249	serpent, isoform B
3R	NT_033777.3	15994226	16003503	+	41944	srp	Dmel_CG3992	NP_732100.2	1264	serpent, isoform A
3R	NT_033777.3	15999381	16003503	+	41944	srp	Dmel_CG3992	NP_001247128.1	731	serpent, isoform E
3R	NT_033777.3	15999381	16003503	+	41944	srp	Dmel_CG3992	NP_001262618.1	746	serpent, isoform F
3R	NT_033777.3	15999381	16003503	+	41944	srp	Dmel_CG3992	NP_001027190.1	746	serpent, isoform D
3R	NT_033777.3	15999381	16003136	+	41944	srp	Dmel_CG3992	NP_001262619.1	469	serpent, isoform G
3R	NT_033777.3	16012739	16018753	+	41945	GATAe	Dmel_CG10278	NP_650516.2	746	GATAe, isoform A
3R	NT_033777.3	16016228	16018753	+	41945	GATAe	Dmel_CG10278	NP_001189231.1	731	GATAe, isoform B
3R	NT_033777.3	16016228	16018753	+	41945	GATAe	Dmel_CG10278	NP_001189232.1	731	GATAe, isoform C
3R	NT_033777.3	16035080	16040312	+	44849	pnr	Dmel_CG3978	NP_001262620.1	537	pannier, isoform C
3R	NT_033777.3	16035080	16040312	+	44849	pnr	Dmel_CG3978	NP_476685.1	540	pannier, isoform A
3R	NT_033777.3	16038716	16040312	+	44849	pnr	Dmel_CG3978	NP_732102.1	488	pannier, isoform B
3R	NT_033777.3	16038716	16040312	+	44849	pnr	Dmel_CG3978	NP_001262621.1	488	pannier, isoform D
3R	NT_033777.3	16043617	16044717	+	41948	CG10264	Dmel_CG10264	NP_650518.1	270	uncharacterized protein Dmel_CG10264
3R	NT_033777.3	16044859	16045909	-	41949	CG10407	Dmel_CG10407	NP_001303466.1	263	uncharacterized protein Dmel_CG10407, isoform C
3R	NT_033777.3	16044859	16045909	-	41949	CG10407	Dmel_CG10407	NP_001262622.1	259	uncharacterized protein Dmel_CG10407, isoform B
3R	NT_033777.3	16044859	16045909	-	41949	CG10407	Dmel_CG10407	NP_650519.1	259	uncharacterized protein Dmel_CG10407, isoform A
3R	NT_033777.3	16046580	16049320	-	44432	IKKbeta	Dmel_CG4201	NP_524751.3	717	I-kappaB kinase beta
3R	NT_033777.3	16049788	16050582	+	41951	CG5013	Dmel_CG5013	NP_650520.1	247	CG5013
3R	NT_033777.3	16052145	16059819	+	41952	msps	Dmel_CG5000	NP_001163627.1	2050	mini spindles, isoform B
3R	NT_033777.3	16052145	16059819	+	41952	msps	Dmel_CG5000	NP_001247131.1	2050	mini spindles, isoform F
3R	NT_033777.3	16052145	16059819	+	41952	msps	Dmel_CG5000	NP_732105.2	2042	mini spindles, isoform C
3R	NT_033777.3	16052145	16059819	+	41952	msps	Dmel_CG5000	NP_001247130.1	2074	mini spindles, isoform E
3R	NT_033777.3	16052145	16059819	+	41952	msps	Dmel_CG5000	NP_001247129.1	2082	mini spindles, isoform D
3R	NT_033777.3	16060687	16067512	-	41953	CG10185	Dmel_CG10185	NP_650521.1	1732	uncharacterized protein Dmel_CG10185
3R	NT_033777.3	16068599	16097588	-	41955	Mhcl	Dmel_CG31045	NP_732108.2	2148	myosin heavy chain-like, isoform A
3R	NT_033777.3	16068599	16075641	-	41955	Mhcl	Dmel_CG31045	NP_732111.1	1134	myosin heavy chain-like, isoform D
3R	NT_033777.3	16068599	16075641	-	41955	Mhcl	Dmel_CG31045	NP_001262623.1	1113	myosin heavy chain-like, isoform I
3R	NT_033777.3	16069193	16097588	-	41955	Mhcl	Dmel_CG31045	NP_732109.2	2194	myosin heavy chain-like, isoform B
3R	NT_033777.3	16069811	16093549	-	41955	Mhcl	Dmel_CG31045	NP_001036716.1	1923	myosin heavy chain-like, isoform F
3R	NT_033777.3	16069811	16071777	-	41955	Mhcl	Dmel_CG31045	NP_001189233.1	533	myosin heavy chain-like, isoform H
3R	NT_033777.3	16069811	16083046	-	41955	Mhcl	Dmel_CG31045	NP_732110.2	920	myosin heavy chain-like, isoform C
3R	NT_033777.3	16069811	16097588	-	41955	Mhcl	Dmel_CG31045	NP_001036715.1	2160	myosin heavy chain-like, isoform G
3R	NT_033777.3	16079127	16080785	-	318250	CG32855	Dmel_CG32855	NP_732112.1	552	uncharacterized protein Dmel_CG32855
3R	NT_033777.3	16085733	16087031	+	41954	sxe2	Dmel_CG4979	NP_650522.1	387	sex-specific enzyme 2, isoform A
3R	NT_033777.3	16085733	16087031	+	41954	sxe2	Dmel_CG4979	NP_001287352.1	387	sex-specific enzyme 2, isoform B
3R	NT_033777.3	16100944	16103114	+	41957	Akt1	Dmel_CG4006	NP_732113.3	611	Akt1, isoform C
3R	NT_033777.3	16101187	16103114	+	41957	Akt1	Dmel_CG4006	NP_732114.1	530	Akt1, isoform A
3R	NT_033777.3	16101187	16103114	+	41957	Akt1	Dmel_CG4006	NP_732115.1	530	Akt1, isoform B
3R	NT_033777.3	16101187	16103114	+	41957	Akt1	Dmel_CG4006	NP_001287354.1	530	Akt1, isoform E
3R	NT_033777.3	16101187	16103114	+	41957	Akt1	Dmel_CG4006	NP_001287353.1	530	Akt1, isoform D
3R	NT_033777.3	16139847	16144762	+	41958	Sb	Dmel_CG4316	NP_001287355.1	787	stubble, isoform B
3R	NT_033777.3	16139847	16144762	+	41958	Sb	Dmel_CG4316	NP_476709.1	787	stubble, isoform A
3R	NT_033777.3	16145831	16146574	-	41959	CG5903	Dmel_CG5903	NP_001287356.1	226	CG5903, isoform B
3R	NT_033777.3	16145831	16146574	-	41959	CG5903	Dmel_CG5903	NP_650523.1	226	CG5903, isoform A
3R	NT_033777.3	16145831	16146574	-	41959	CG5903	Dmel_CG5903	NP_001303436.1	226	CG5903, isoform C
3R	NT_033777.3	16147642	16148766	+	41960	CG5916	Dmel_CG5916	NP_001287357.1	330	CG5916, isoform B
3R	NT_033777.3	16147642	16148766	+	41960	CG5916	Dmel_CG5916	NP_650524.1	330	CG5916, isoform A
3R	NT_033777.3	16149788	16151220	-	41961	Fer2	Dmel_CG5952	NP_001287358.1	279	48 related 2, isoform C
3R	NT_033777.3	16149788	16151220	-	41961	Fer2	Dmel_CG5952	NP_524376.2	274	48 related 2, isoform B
3R	NT_033777.3	16149788	16151220	-	41961	Fer2	Dmel_CG5952	NP_001287359.1	283	48 related 2, isoform D
3R	NT_033777.3	16149788	16151220	-	41961	Fer2	Dmel_CG5952	NP_001287360.1	273	48 related 2, isoform E
3R	NT_033777.3	16155517	16170244	+	41962	CG6006	Dmel_CG6006	NP_001097812.1	603	CG6006, isoform C
3R	NT_033777.3	16166550	16170244	+	41962	CG6006	Dmel_CG6006	NP_650525.1	569	CG6006, isoform B
3R	NT_033777.3	16166550	16170244	+	41962	CG6006	Dmel_CG6006	NP_001247134.1	569	CG6006, isoform F
3R	NT_033777.3	16166550	16170244	+	41962	CG6006	Dmel_CG6006	NP_001247133.1	569	CG6006, isoform E
3R	NT_033777.3	16166550	16170244	+	41962	CG6006	Dmel_CG6006	NP_001247132.1	569	CG6006, isoform D
3R	NT_033777.3	16172157	16180256	+	41963	CG8925	Dmel_CG8925	NP_001097813.1	606	CG8925, isoform B
3R	NT_033777.3	16172157	16180256	+	41963	CG8925	Dmel_CG8925	NP_650526.1	670	CG8925, isoform A
3R	NT_033777.3	16181175	16186114	+	41964	CG8927	Dmel_CG8927	NP_650527.2	371	CG8927, isoform C
3R	NT_033777.3	16181175	16185830	+	41964	CG8927	Dmel_CG8927	NP_001034056.1	297	CG8927, isoform B
3R	NT_033777.3	16186252	16186777	-	41965	Bin1	Dmel_CG6046	NP_001303440.1	150	bicoid interacting protein 1, isoform B
3R	NT_033777.3	16186252	16186777	-	41965	Bin1	Dmel_CG6046	NP_001303441.1	150	bicoid interacting protein 1, isoform C
3R	NT_033777.3	16186252	16186777	-	41965	Bin1	Dmel_CG6046	NP_524377.1	150	bicoid interacting protein 1, isoform A
3R	NT_033777.3	16196037	16196915	+	47384	sra	Dmel_CG6072	NP_001287361.1	292	sarah, isoform B
3R	NT_033777.3	16196037	16196915	+	47384	sra	Dmel_CG6072	NP_524378.1	292	sarah, isoform A
3R	NT_033777.3	16198208	16202833	-	41967	CG6126	Dmel_CG6126	NP_650528.1	555	CG6126
3R	NT_033777.3	16203435	16204214	+	318663	CG31287	Dmel_CG31287	NP_001287362.1	222	uncharacterized protein Dmel_CG31287, isoform B
3R	NT_033777.3	16203435	16204214	+	318663	CG31287	Dmel_CG31287	NP_732119.1	222	uncharacterized protein Dmel_CG31287, isoform A
3R	NT_033777.3	16204314	16205236	-	41968	mtSSB	Dmel_CG4337	NP_536744.2	146	mitochondrial single stranded DNA-binding protein
3R	NT_033777.3	16226416	16259504	+	53562	tara	Dmel_CG6889	NP_524994.2	916	taranis, isoform A
3R	NT_033777.3	16243318	16259504	+	53562	tara	Dmel_CG6889	NP_732120.1	912	taranis, isoform B
3R	NT_033777.3	16261834	16263952	-	53565	bor	Dmel_CG6815	NP_524996.1	604	belphegor, isoform A
3R	NT_033777.3	16261834	16263952	-	53565	bor	Dmel_CG6815	NP_001247135.1	604	belphegor, isoform B
3R	NT_033777.3	16264353	16266546	+	41971	asun	Dmel_CG6814	NP_524379.2	689	asunder
3R	NT_033777.3	16267096	16268340	+	41972	Mst89B	Dmel_CG6864	NP_650529.2	369	Mst89B
3R	NT_033777.3	16268463	16272334	-	41973	Mat89Ba	Dmel_CG12785	NP_650530.2	1193	maternal transcript 89Ba
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_001247138.1	496	gilgamesh, isoform K
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_788683.1	463	gilgamesh, isoform E
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_732124.3	468	gilgamesh, isoform B
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_001247137.1	521	gilgamesh, isoform J
3R	NT_033777.3	16275144	16297465	+	49701	gish	Dmel_CG6963	NP_001014628.1	358	gilgamesh, isoform F
3R	NT_033777.3	16275144	16302081	+	49701	gish	Dmel_CG6963	NP_001262624.1	537	gilgamesh, isoform L
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_732125.2	468	gilgamesh, isoform D
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_001163628.1	474	gilgamesh, isoform I
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_001014626.1	468	gilgamesh, isoform H
3R	NT_033777.3	16275144	16301874	+	49701	gish	Dmel_CG6963	NP_001262625.1	468	gilgamesh, isoform M
3R	NT_033777.3	16289324	16301874	+	49701	gish	Dmel_CG6963	NP_001014627.2	476	gilgamesh, isoform G
3R	NT_033777.3	16289728	16301874	+	49701	gish	Dmel_CG6963	NP_732123.1	422	gilgamesh, isoform A
3R	NT_033777.3	16289728	16301874	+	49701	gish	Dmel_CG6963	NP_524941.3	427	gilgamesh, isoform C
3R	NT_033777.3	16306171	16308590	+	41975	Zip89B	Dmel_CG6898	NP_536747.2	495	Zinc/iron regulated transporter-related protein 89B
3R	NT_033777.3	16311181	16315131	-	53437	Sulf1	Dmel_CG6725	NP_001262626.1	1114	sulfated, isoform B
3R	NT_033777.3	16311181	16315131	-	53437	Sulf1	Dmel_CG6725	NP_001262627.1	1114	sulfated, isoform C
3R	NT_033777.3	16311181	16315131	-	53437	Sulf1	Dmel_CG6725	NP_524987.1	1114	sulfated, isoform A
3R	NT_033777.3	16321930	16322130	+	14462479	CG44044	Dmel_CG44044	NP_001262628.1	66	uncharacterized protein Dmel_CG44044
3R	NT_033777.3	16323463	16325053	+	41977	CG6901	Dmel_CG6901	NP_650531.1	485	CG6901
3R	NT_033777.3	16325573	16327218	+	41978	CG17929	Dmel_CG17929	NP_650532.2	491	uncharacterized protein Dmel_CG17929
3R	NT_033777.3	16327943	16329572	+	41979	CG17930	Dmel_CG17930	NP_650533.1	502	uncharacterized protein Dmel_CG17930
3R	NT_033777.3	16340654	16341891	-	53443	SF2	Dmel_CG6987	NP_001247139.1	255	splicing factor 2, isoform B
3R	NT_033777.3	16340654	16341891	-	53443	SF2	Dmel_CG6987	NP_652611.1	255	splicing factor 2, isoform A
3R	NT_033777.3	16342394	16345404	+	41981	pad	Dmel_CG10309	NP_650534.2	924	poils au dos
3R	NT_033777.3	16347093	16348884	-	41982	CG14879	Dmel_CG14879	NP_732131.1	179	uncharacterized protein Dmel_CG14879, isoform A
3R	NT_033777.3	16347093	16348884	-	41982	CG14879	Dmel_CG14879	NP_650535.1	148	uncharacterized protein Dmel_CG14879, isoform B
3R	NT_033777.3	16347093	16348884	-	41982	CG14879	Dmel_CG14879	NP_001262629.1	179	uncharacterized protein Dmel_CG14879, isoform C
3R	NT_033777.3	16347093	16348884	-	41982	CG14879	Dmel_CG14879	NP_001287363.1	179	uncharacterized protein Dmel_CG14879, isoform D
3R	NT_033777.3	16349511	16350583	+	41983	Manf	Dmel_CG7013	NP_477445.1	173	mesencephalic astrocyte-derived neurotrophic factor
3R	NT_033777.3	16351130	16352331	-	41984	CG10311	Dmel_CG10311	NP_650536.1	165	uncharacterized protein Dmel_CG10311, isoform A
3R	NT_033777.3	16351130	16352331	-	41984	CG10311	Dmel_CG10311	NP_001287364.1	165	uncharacterized protein Dmel_CG10311, isoform B
3R	NT_033777.3	16358542	16359141	-	8674030	CG17931	Dmel_CG17931	NP_001262630.1	60	uncharacterized protein Dmel_CG17931, isoform C
3R	NT_033777.3	16358542	16359141	-	8674030	CG17931	Dmel_CG17931	NP_001287365.1	60	uncharacterized protein Dmel_CG17931, isoform D
3R	NT_033777.3	16358542	16359141	-	8674030	CG17931	Dmel_CG17931	NP_001303489.1	60	uncharacterized protein Dmel_CG17931, isoform E
3R	NT_033777.3	16358542	16359141	-	8674030	CG17931	Dmel_CG17931	NP_732133.1	60	uncharacterized protein Dmel_CG17931, isoform A
3R	NT_033777.3	16359624	16360108	-	41985	CG42446	Dmel_CG42446	NP_650537.3	123	uncharacterized protein Dmel_CG42446
3R	NT_033777.3	16360496	16365603	-	41986	CG14880	Dmel_CG14880	NP_650538.1	637	uncharacterized protein Dmel_CG14880, isoform A
3R	NT_033777.3	16360496	16365603	-	41986	CG14880	Dmel_CG14880	NP_732134.1	637	uncharacterized protein Dmel_CG14880, isoform B
3R	NT_033777.3	16369486	16370331	-	41987	CG10317	Dmel_CG10317	NP_001138059.2	215	uncharacterized protein Dmel_CG10317, isoform D
3R	NT_033777.3	16369486	16370331	-	41987	CG10317	Dmel_CG10317	NP_650539.2	215	uncharacterized protein Dmel_CG10317, isoform C
3R	NT_033777.3	16375533	16401895	-	41988	ss	Dmel_CG6993	NP_001247140.1	1015	spineless, isoform C
3R	NT_033777.3	16375533	16401895	-	41988	ss	Dmel_CG6993	NP_001163629.2	1015	spineless, isoform D
3R	NT_033777.3	16376226	16401895	-	41988	ss	Dmel_CG6993	NP_476748.1	884	spineless, isoform A
3R	NT_033777.3	16430821	16432552	+	318657	CG31279	Dmel_CG31279	NP_001262632.1	391	uncharacterized protein Dmel_CG31279, isoform E
3R	NT_033777.3	16430821	16432796	+	318657	CG31279	Dmel_CG31279	NP_001262631.1	445	uncharacterized protein Dmel_CG31279, isoform D
3R	NT_033777.3	16430821	16432552	+	318657	CG31279	Dmel_CG31279	NP_001163630.1	391	uncharacterized protein Dmel_CG31279, isoform C
3R	NT_033777.3	16430821	16432796	+	318657	CG31279	Dmel_CG31279	NP_732136.2	454	uncharacterized protein Dmel_CG31279, isoform B
3R	NT_033777.3	16432349	16432796	+	318657	CG31279	Dmel_CG31279	NP_001262634.1	129	uncharacterized protein Dmel_CG31279, isoform G
3R	NT_033777.3	16432349	16432552	+	318657	CG31279	Dmel_CG31279	NP_001262633.1	67	uncharacterized protein Dmel_CG31279, isoform F
3R	NT_033777.3	16433083	16434516	+	41989	CG17565	Dmel_CG17565	NP_650540.1	419	uncharacterized protein Dmel_CG17565
3R	NT_033777.3	16434965	16436027	+	41990	CG14881	Dmel_CG14881	NP_732137.1	286	uncharacterized protein Dmel_CG14881, isoform A
3R	NT_033777.3	16434965	16435693	+	41990	CG14881	Dmel_CG14881	NP_650541.1	204	uncharacterized protein Dmel_CG14881, isoform B
3R	NT_033777.3	16436077	16436480	-	41991	mRpS33	Dmel_CG10406	NP_524380.1	113	mitochondrial ribosomal protein S33
3R	NT_033777.3	16437023	16441418	-	41992	ema	Dmel_CG12753	NP_001262635.1	1028	endosomal maturation defective, isoform C
3R	NT_033777.3	16437023	16441418	-	41992	ema	Dmel_CG12753	NP_650542.1	1067	endosomal maturation defective, isoform A
3R	NT_033777.3	16437023	16441418	-	41992	ema	Dmel_CG12753	NP_001034058.1	998	endosomal maturation defective, isoform B
3R	NT_033777.3	16442072	16442917	-	41993	CG14894	Dmel_CG14894	NP_001262636.1	263	uncharacterized protein Dmel_CG14894, isoform B
3R	NT_033777.3	16442072	16442917	-	41993	CG14894	Dmel_CG14894	NP_650543.1	263	uncharacterized protein Dmel_CG14894, isoform A
3R	NT_033777.3	16443288	16444702	+	41994	CG14882	Dmel_CG14882	NP_650544.1	454	uncharacterized protein Dmel_CG14882, isoform A
3R	NT_033777.3	16443288	16444702	+	41994	CG14882	Dmel_CG14882	NP_001262637.1	454	uncharacterized protein Dmel_CG14882, isoform B
3R	NT_033777.3	16451159	16452910	-	41995	Pak3	Dmel_CG14895	NP_001262638.1	583	Pak3, isoform D
3R	NT_033777.3	16451201	16452910	-	41995	Pak3	Dmel_CG14895	NP_732141.2	569	Pak3, isoform C
3R	NT_033777.3	16451201	16452910	-	41995	Pak3	Dmel_CG14895	NP_650545.2	569	Pak3, isoform A
3R	NT_033777.3	16454567	16455750	+	41996	CG10405	Dmel_CG10405	NP_001036717.1	268	uncharacterized protein Dmel_CG10405
3R	NT_033777.3	16456411	16457663	+	41997	CG14883	Dmel_CG14883	NP_650547.1	330	uncharacterized protein Dmel_CG14883
3R	NT_033777.3	16458599	16469407	-	7354465	CG42232	Dmel_CG42232	NP_001138060.1	3441	uncharacterized protein Dmel_CG42232
3R	NT_033777.3	16470179	16471274	+	42000	CSN5	Dmel_CG14884	NP_001262639.1	325	COP9 signalosome subunit 5, isoform B
3R	NT_033777.3	16470179	16471274	+	42000	CSN5	Dmel_CG14884	NP_477442.1	327	COP9 signalosome subunit 5, isoform A
3R	NT_033777.3	16473370	16475373	+	42001	Gyc89Da	Dmel_CG14885	NP_001036718.1	667	guanylyl cyclase at 89Da, isoform C
3R	NT_033777.3	16473370	16475373	+	42001	Gyc89Da	Dmel_CG14885	NP_001036719.1	667	guanylyl cyclase at 89Da, isoform B
3R	NT_033777.3	16478827	16480836	+	42002	Gyc89Db	Dmel_CG14886	NP_650551.1	669	guanylyl cyclase at 89Db
3R	NT_033777.3	16481261	16481859	+	42003	Dhfr	Dmel_CG14887	NP_732147.1	182	dihydrofolate reductase, isoform A
3R	NT_033777.3	16481261	16481859	+	42003	Dhfr	Dmel_CG14887	NP_001036720.1	182	dihydrofolate reductase, isoform B
3R	NT_033777.3	16481877	16482361	-	42004	Sdhaf3	Dmel_CG14898	NP_650552.3	120	succinate dehydrogenase assembly factor 3
3R	NT_033777.3	16483029	16483954	-	42005	Der-2	Dmel_CG14899	NP_650553.1	261	Derlin-2
3R	NT_033777.3	16484699	16495360	-	42006	Cad89D	Dmel_CG14900	NP_650554.3	2240	cadherin 89D
3R	NT_033777.3	16497817	16498959	-	42007	Gr89a	Dmel_CG14901	NP_650555.2	362	gustatory receptor 89a
3R	NT_033777.3	16499195	16501003	-	42008	Decay	Dmel_CG14902	NP_477462.1	308	death executioner caspase related to Apopain/Yama
3R	NT_033777.3	16513450	16566220	+	7354466	CG42342	Dmel_CG42342	NP_001138063.2	670	uncharacterized protein Dmel_CG42342, isoform M
3R	NT_033777.3	16513450	16571009	+	7354466	CG42342	Dmel_CG42342	NP_001189235.2	770	uncharacterized protein Dmel_CG42342, isoform P
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001247143.1	804	uncharacterized protein Dmel_CG42342, isoform L
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001262640.1	596	uncharacterized protein Dmel_CG42342, isoform R
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001189234.1	831	uncharacterized protein Dmel_CG42342, isoform H
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001163631.2	601	uncharacterized protein Dmel_CG42342, isoform Q
3R	NT_033777.3	16513450	16566220	+	7354466	CG42342	Dmel_CG42342	NP_001138062.2	665	uncharacterized protein Dmel_CG42342, isoform N
3R	NT_033777.3	16513450	16571009	+	7354466	CG42342	Dmel_CG42342	NP_001138064.2	765	uncharacterized protein Dmel_CG42342, isoform O
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001247141.2	808	uncharacterized protein Dmel_CG42342, isoform S
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001247142.1	799	uncharacterized protein Dmel_CG42342, isoform K
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001138061.1	822	uncharacterized protein Dmel_CG42342, isoform D
3R	NT_033777.3	16513450	16570411	+	7354466	CG42342	Dmel_CG42342	NP_001262641.1	813	uncharacterized protein Dmel_CG42342, isoform T
3R	NT_033777.3	16571531	16573018	+	42013	CG14891	Dmel_CG14891	NP_650560.1	495	uncharacterized protein Dmel_CG14891
3R	NT_033777.3	16573227	16573718	-	42014	CG14903	Dmel_CG14903	NP_650561.1	119	uncharacterized protein Dmel_CG14903
3R	NT_033777.3	16575071	16579047	-	42015	Scp2	Dmel_CG14904	NP_524381.1	184	sarcoplasmic calcium-binding protein 2
3R	NT_033777.3	16595098	16597054	+	42016	CG14892	Dmel_CG14892	NP_650562.1	442	uncharacterized protein Dmel_CG14892
3R	NT_033777.3	16597300	16604324	-	42017	CG10345	Dmel_CG10345	NP_650563.2	552	uncharacterized protein Dmel_CG10345
3R	NT_033777.3	16610779	16611140	+	42018	NPF	Dmel_CG10342	NP_001262642.1	102	neuropeptide F, isoform B
3R	NT_033777.3	16610779	16611140	+	42018	NPF	Dmel_CG10342	NP_001262643.1	102	neuropeptide F, isoform C
3R	NT_033777.3	16610779	16611140	+	42018	NPF	Dmel_CG10342	NP_536741.1	102	neuropeptide F, isoform A
3R	NT_033777.3	16611550	16613200	-	42019	CG12783	Dmel_CG12783	NP_650564.2	465	uncharacterized protein Dmel_CG12783, isoform B
3R	NT_033777.3	16611550	16613200	-	42019	CG12783	Dmel_CG12783	NP_001262644.1	465	uncharacterized protein Dmel_CG12783, isoform C
3R	NT_033777.3	16613456	16614348	-	42020	CG10340	Dmel_CG10340	NP_650565.2	278	uncharacterized protein Dmel_CG10340
3R	NT_033777.3	16615409	16617080	+	42021	CG17562	Dmel_CG17562	NP_650566.1	499	uncharacterized protein Dmel_CG17562
3R	NT_033777.3	16617981	16619697	+	42022	CG17560	Dmel_CG17560	NP_650567.1	499	uncharacterized protein Dmel_CG17560
3R	NT_033777.3	16620829	16622598	+	42023	CG14893	Dmel_CG14893	NP_650568.2	510	uncharacterized protein Dmel_CG14893
3R	NT_033777.3	16622876	16624620	-	42024	CG14905	Dmel_CG14905	NP_650569.1	473	uncharacterized protein Dmel_CG14905
3R	NT_033777.3	16626112	16638627	+	42025	Fas1	Dmel_CG6588	NP_001138066.1	636	fasciclin 1, isoform F
3R	NT_033777.3	16626112	16637191	+	42025	Fas1	Dmel_CG6588	NP_732164.1	655	fasciclin 1, isoform C
3R	NT_033777.3	16626112	16637191	+	42025	Fas1	Dmel_CG6588	NP_001097814.1	662	fasciclin 1, isoform D
3R	NT_033777.3	16626112	16637191	+	42025	Fas1	Dmel_CG6588	NP_001262645.1	661	fasciclin 1, isoform G
3R	NT_033777.3	16626112	16637191	+	42025	Fas1	Dmel_CG6588	NP_732166.1	649	fasciclin 1, isoform A
3R	NT_033777.3	16626112	16637191	+	42025	Fas1	Dmel_CG6588	NP_732165.1	652	fasciclin 1, isoform B
3R	NT_033777.3	16626112	16638627	+	42025	Fas1	Dmel_CG6588	NP_001138065.1	624	fasciclin 1, isoform E
3R	NT_033777.3	16640328	16642220	+	42026	nonA-l	Dmel_CG10328	NP_001262646.1	630	nonA-like, isoform B
3R	NT_033777.3	16640328	16642220	+	42026	nonA-l	Dmel_CG10328	NP_536740.1	630	nonA-like, isoform A
3R	NT_033777.3	16643885	16644751	+	42027	CG10326	Dmel_CG10326	NP_001262647.1	197	uncharacterized protein Dmel_CG10326, isoform B
3R	NT_033777.3	16643885	16644751	+	42027	CG10326	Dmel_CG10326	NP_650570.1	197	uncharacterized protein Dmel_CG10326, isoform A
3R	NT_033777.3	16645174	16646927	-	42028	CG10324	Dmel_CG10324	NP_650571.2	543	uncharacterized protein Dmel_CG10324
3R	NT_033777.3	16647896	16649739	+	42029	Cctgamma	Dmel_CG8977	NP_001189237.1	544	cctgamma, isoform D
3R	NT_033777.3	16647896	16649739	+	42029	Cctgamma	Dmel_CG8977	NP_732167.1	544	cctgamma, isoform B
3R	NT_033777.3	16647896	16649739	+	42029	Cctgamma	Dmel_CG8977	NP_650572.2	544	cctgamma, isoform A
3R	NT_033777.3	16647896	16649739	+	42029	Cctgamma	Dmel_CG8977	NP_001189236.1	544	cctgamma, isoform C
3R	NT_033777.3	16650046	16651125	-	42030	CG14906	Dmel_CG14906	NP_650573.1	359	uncharacterized protein Dmel_CG14906
3R	NT_033777.3	16651555	16652259	-	42031	CG14907	Dmel_CG14907	NP_650574.1	234	uncharacterized protein Dmel_CG14907
3R	NT_033777.3	16652692	16655506	-	42032	modSP	Dmel_CG31217	NP_536776.2	628	modular serine protease
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_996219.1	355	ultrabithorax, isoform F
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_536748.1	346	ultrabithorax, isoform B
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_732173.1	372	ultrabithorax, isoform C
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_536752.1	389	ultrabithorax, isoform A
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_732172.1	380	ultrabithorax, isoform E
3R	NT_033777.3	16658772	16733463	-	42034	Ubx	Dmel_CG10388	NP_732171.1	363	ultrabithorax, isoform D
3R	NT_033777.3	16750968	16751273	-	326131	CG31275	Dmel_CG31275	NP_732175.1	101	uncharacterized protein Dmel_CG31275
3R	NT_033777.3	16788348	16789871	+	42036	Glut3	Dmel_CG3853	NP_536732.1	507	glucose transporter type 3
3R	NT_033777.3	16809687	16827223	-	42037	abd-A	Dmel_CG10325	NP_001163632.1	330	abdominal A, isoform C
3R	NT_033777.3	16809687	16827223	-	42037	abd-A	Dmel_CG10325	NP_476693.1	330	abdominal A, isoform A
3R	NT_033777.3	16809687	16828003	-	42037	abd-A	Dmel_CG10325	NP_732176.1	590	abdominal A, isoform B
3R	NT_033777.3	16809687	16827223	-	42037	abd-A	Dmel_CG10325	NP_001247145.1	330	abdominal A, isoform D
3R	NT_033777.3	16929230	16931605	-	47763	Abd-B	Dmel_CG11648	NP_001262648.1	323	abdominal B, isoform F
3R	NT_033777.3	16929341	16931605	-	47763	Abd-B	Dmel_CG11648	NP_001303473.1	286	abdominal B, isoform G
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_001303474.1	270	abdominal B, isoform I
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_001303471.1	270	abdominal B, isoform J
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_996220.1	270	abdominal B, isoform E
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_732180.1	270	abdominal B, isoform C
3R	NT_033777.3	16929389	16933031	-	47763	Abd-B	Dmel_CG11648	NP_001303472.1	493	abdominal B, isoform H
3R	NT_033777.3	16929389	16933031	-	47763	Abd-B	Dmel_CG11648	NP_524896.2	493	abdominal B, isoform B
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_650577.1	270	abdominal B, isoform A
3R	NT_033777.3	16929389	16931605	-	47763	Abd-B	Dmel_CG11648	NP_732181.1	270	abdominal B, isoform D
3R	NT_033777.3	16975218	16975484	+	42041	VhaM9.7-d	Dmel_CG14909	NP_650578.1	88	vacuolar 
3R	NT_033777.3	16975903	16977619	-	44964	Actn3	Dmel_CG8953	NP_524801.1	553	alpha actinin 3
3R	NT_033777.3	16978517	16981689	-	42043	AhcyL2	Dmel_CG8956	NP_996222.1	492	adenosylhomocysteinase like 2, isoform C
3R	NT_033777.3	16978547	16981689	-	42043	AhcyL2	Dmel_CG8956	NP_996221.1	504	adenosylhomocysteinase like 2, isoform D
3R	NT_033777.3	16983824	16984583	-	42044	CG18622	Dmel_CG18622	NP_001262649.1	94	uncharacterized protein Dmel_CG18622, isoform B
3R	NT_033777.3	16983824	16984583	-	42044	CG18622	Dmel_CG18622	NP_650579.1	94	uncharacterized protein Dmel_CG18622, isoform A
3R	NT_033777.3	16983824	16984583	-	42044	CG18622	Dmel_CG18622	NP_001287366.1	94	uncharacterized protein Dmel_CG18622, isoform C
3R	NT_033777.3	16988925	16989885	+	64872	MESK4	Dmel_CG31447	NP_001262650.1	280	misexpression suppressor of KSR 4, isoform B
3R	NT_033777.3	16988925	16989885	+	64872	MESK4	Dmel_CG31447	NP_525017.1	280	misexpression suppressor of KSR 4, isoform A
3R	NT_033777.3	16990590	16991767	-	42045	CG3678	Dmel_CG3678	NP_650580.1	282	CG3678, isoform A
3R	NT_033777.3	16990590	16991767	-	42045	CG3678	Dmel_CG3678	NP_001262651.1	282	CG3678, isoform B
3R	NT_033777.3	16993137	16994097	+	318655	CG31274	Dmel_CG31274	NP_732186.1	280	uncharacterized protein Dmel_CG31274
3R	NT_033777.3	16994811	16995959	-	42046	CG17556	Dmel_CG17556	NP_650581.1	282	uncharacterized protein Dmel_CG17556, isoform A
3R	NT_033777.3	16994811	16995959	-	42046	CG17556	Dmel_CG17556	NP_001262652.1	282	uncharacterized protein Dmel_CG17556, isoform B
3R	NT_033777.3	16996589	16999272	+	42047	CG3534	Dmel_CG3534	NP_650582.1	552	CG3534
3R	NT_033777.3	16999491	17002259	-	42048	CG16941	Dmel_CG16941	NP_650583.1	784	uncharacterized protein Dmel_CG16941
3R	NT_033777.3	17003076	17007113	+	42049	Irc	Dmel_CG8913	NP_001262653.1	697	Immune-regulated catalase, isoform B
3R	NT_033777.3	17003076	17007113	+	42049	Irc	Dmel_CG8913	NP_650584.1	697	Immune-regulated catalase, isoform A
3R	NT_033777.3	17008870	17012412	+	42050	CG8907	Dmel_CG8907	NP_001247146.1	732	CG8907, isoform B
3R	NT_033777.3	17009411	17012412	+	42050	CG8907	Dmel_CG8907	NP_650585.1	712	CG8907, isoform A
3R	NT_033777.3	17019549	17020994	-	42051	AdSL	Dmel_CG3590	NP_650586.2	481	adenylosuccinate lyase
3R	NT_033777.3	17025406	17027901	+	2768671	Pxd	Dmel_CG3477	NP_001262654.1	688	peroxidase, isoform C
3R	NT_033777.3	17025406	17027901	+	2768671	Pxd	Dmel_CG3477	NP_996223.1	690	peroxidase, isoform A
3R	NT_033777.3	17025406	17027901	+	2768671	Pxd	Dmel_CG3477	NP_001163633.1	690	peroxidase, isoform B
3R	NT_033777.3	17028706	17030664	+	42053	CG5225	Dmel_CG5225	NP_650587.1	594	CG5225
3R	NT_033777.3	17031817	17032441	+	318652	CG31268	Dmel_CG31268	NP_001247147.1	187	uncharacterized protein Dmel_CG31268, isoform B
3R	NT_033777.3	17031817	17033247	+	318652	CG31268	Dmel_CG31268	NP_732191.1	434	uncharacterized protein Dmel_CG31268, isoform A
3R	NT_033777.3	17033825	17036018	-	42054	CG4009	Dmel_CG4009	NP_001262655.1	649	CG4009, isoform C
3R	NT_033777.3	17033825	17036018	-	42054	CG4009	Dmel_CG4009	NP_650588.2	649	CG4009, isoform B
3R	NT_033777.3	17036648	17040100	-	42055	CG18213	Dmel_CG18213	NP_001287368.1	876	uncharacterized protein Dmel_CG18213, isoform D
3R	NT_033777.3	17036648	17040100	-	42055	CG18213	Dmel_CG18213	NP_001287367.1	878	uncharacterized protein Dmel_CG18213, isoform C
3R	NT_033777.3	17036648	17040100	-	42055	CG18213	Dmel_CG18213	NP_650589.2	879	uncharacterized protein Dmel_CG18213, isoform B
3R	NT_033777.3	17040847	17041867	+	42056	CG5220	Dmel_CG5220	NP_650590.1	302	CG5220
3R	NT_033777.3	17042038	17043062	-	42057	CG3995	Dmel_CG3995	NP_650591.1	322	CG3995
3R	NT_033777.3	17043650	17047129	+	42058	Patr-1	Dmel_CG5208	NP_650592.1	968	protein associated with topo II related - 1, isoform A
3R	NT_033777.3	17043650	17047129	+	42058	Patr-1	Dmel_CG5208	NP_001287369.1	968	protein associated with topo II related - 1, isoform B
3R	NT_033777.3	17057711	17069135	+	42059	Dad	Dmel_CG5201	NP_477260.1	568	daughters against dpp, isoform A
3R	NT_033777.3	17057711	17069135	+	42059	Dad	Dmel_CG5201	NP_001014629.1	568	daughters against dpp, isoform C
3R	NT_033777.3	17057711	17069135	+	42059	Dad	Dmel_CG5201	NP_732196.1	568	daughters against dpp, isoform B
3R	NT_033777.3	17070600	17072603	-	42060	Ns1	Dmel_CG3983	NP_732199.2	581	nucleostemin 1
3R	NT_033777.3	17072798	17073735	+	42061	mRpS11	Dmel_CG5184	NP_524382.1	200	mitochondrial ribosomal protein S11
3R	NT_033777.3	17074338	17077905	-	42062	Keap1	Dmel_CG3962	NP_732202.2	776	Keap1, isoform B
3R	NT_033777.3	17074338	17076885	-	42062	Keap1	Dmel_CG3962	NP_788685.1	744	Keap1, isoform C
3R	NT_033777.3	17074338	17076885	-	42062	Keap1	Dmel_CG3962	NP_650594.1	744	Keap1, isoform A
3R	NT_033777.3	17082697	17084409	+	42063	kuk	Dmel_CG5175	NP_001247148.1	570	kugelkern, isoform C
3R	NT_033777.3	17082697	17084409	+	42063	kuk	Dmel_CG5175	NP_650595.1	570	kugelkern, isoform A
3R	NT_033777.3	17082697	17084409	+	42063	kuk	Dmel_CG5175	NP_732204.1	570	kugelkern, isoform B
3R	NT_033777.3	17085798	17087726	+	42064	GckIII	Dmel_CG5169	NP_650596.1	642	germinal centre kinase III
3R	NT_033777.3	17088402	17091398	+	42065	cal1	Dmel_CG5148	NP_650597.2	979	chromosome alignment defect 1
3R	NT_033777.3	17092040	17122412	-	42066	cher	Dmel_CG3937	NP_001189238.1	2240	cheerio, isoform I
3R	NT_033777.3	17092040	17117226	-	42066	cher	Dmel_CG3937	NP_524383.3	2210	cheerio, isoform A
3R	NT_033777.3	17092040	17094738	-	42066	cher	Dmel_CG3937	NP_001262656.1	838	cheerio, isoform K
3R	NT_033777.3	17092040	17098269	-	42066	cher	Dmel_CG3937	NP_001138067.1	919	cheerio, isoform F
3R	NT_033777.3	17092040	17117226	-	42066	cher	Dmel_CG3937	NP_001262659.1	2404	cheerio, isoform N
3R	NT_033777.3	17092040	17094738	-	42066	cher	Dmel_CG3937	NP_732207.1	838	cheerio, isoform B
3R	NT_033777.3	17092040	17122412	-	42066	cher	Dmel_CG3937	NP_001262658.1	2429	cheerio, isoform M
3R	NT_033777.3	17092040	17117226	-	42066	cher	Dmel_CG3937	NP_001262657.1	2399	cheerio, isoform L
3R	NT_033777.3	17092040	17098083	-	42066	cher	Dmel_CG3937	NP_732208.2	857	cheerio, isoform H
3R	NT_033777.3	17092040	17117226	-	42066	cher	Dmel_CG3937	NP_996224.2	2399	cheerio, isoform G
3R	NT_033777.3	17120479	17120754	+	5740656	CG34278	Dmel_CG34278	NP_001097817.1	91	uncharacterized protein Dmel_CG34278
3R	NT_033777.3	17121593	17121778	+	10178912	CG42779	Dmel_CG42779	NP_001189239.1	61	uncharacterized protein Dmel_CG42779, isoform A
3R	NT_033777.3	17121593	17121778	+	10178912	CG42779	Dmel_CG42779	NP_001287370.1	61	uncharacterized protein Dmel_CG42779, isoform B
3R	NT_033777.3	17124489	17124758	+	19835571	CG45079	Dmel_CG45079	NP_001287371.1	89	uncharacterized protein Dmel_CG45079
3R	NT_033777.3	17126127	17126930	-	42067	CG17477	Dmel_CG17477	NP_650598.1	267	uncharacterized protein Dmel_CG17477
3R	NT_033777.3	17127131	17128091	+	318653	CG31269	Dmel_CG31269	NP_001097818.1	273	uncharacterized protein Dmel_CG31269
3R	NT_033777.3	17128246	17129046	+	42068	CG31265	Dmel_CG31265	NP_650599.1	266	uncharacterized protein Dmel_CG31265
3R	NT_033777.3	17129517	17130383	-	42069	CG17475	Dmel_CG17475	NP_001287372.1	288	uncharacterized protein Dmel_CG17475, isoform B
3R	NT_033777.3	17129517	17130383	-	42069	CG17475	Dmel_CG17475	NP_650600.2	288	uncharacterized protein Dmel_CG17475, isoform A
3R	NT_033777.3	17131296	17132156	-	42070	CG4053	Dmel_CG4053	NP_650601.2	265	CG4053
3R	NT_033777.3	17132685	17133598	+	42071	CG31266	Dmel_CG31266	NP_001138068.1	282	uncharacterized protein Dmel_CG31266
3R	NT_033777.3	17134220	17135213	+	318651	CG31267	Dmel_CG31267	NP_732214.1	275	uncharacterized protein Dmel_CG31267
3R	NT_033777.3	17136205	17137023	+	42072	CG5246	Dmel_CG5246	NP_650603.1	272	CG5246
3R	NT_033777.3	17137911	17138791	+	42073	CG5255	Dmel_CG5255	NP_650604.1	273	CG5255
3R	NT_033777.3	17139107	17141038	+	42074	CG5265	Dmel_CG5265	NP_650605.1	643	CG5265
3R	NT_033777.3	17141315	17142312	-	42075	TwdlW	Dmel_CG4060	NP_650606.2	308	TweedleW
3R	NT_033777.3	17145640	17148894	-	42076	m-cup	Dmel_CG11896	NP_001262660.1	701	mann-cup, isoform B
3R	NT_033777.3	17145640	17148894	-	42076	m-cup	Dmel_CG11896	NP_650607.1	702	mann-cup, isoform A
3R	NT_033777.3	17149771	17150370	+	42077	Det	Dmel_CG12265	NP_650608.1	153	deterin
3R	NT_033777.3	17150656	17151559	+	42078	CG5285	Dmel_CG5285	NP_650609.1	280	CG5285
3R	NT_033777.3	17151974	17152456	+	42079	CG5292	Dmel_CG5292	NP_650610.1	160	CG5292, isoform A
3R	NT_033777.3	17151974	17152456	+	42079	CG5292	Dmel_CG5292	NP_001262661.1	160	CG5292, isoform B
3R	NT_033777.3	17153520	17170001	-	42080	Mur89F	Dmel_CG4090	NP_001262662.1	2159	mucin related 89F, isoform B
3R	NT_033777.3	17153520	17170001	-	42080	Mur89F	Dmel_CG4090	NP_650611.2	2158	mucin related 89F, isoform C
3R	NT_033777.3	17217238	17219432	-	318649	CG31262	Dmel_CG31262	NP_001138069.2	579	uncharacterized protein Dmel_CG31262, isoform E
3R	NT_033777.3	17217238	17219432	-	318649	CG31262	Dmel_CG31262	NP_732222.2	579	uncharacterized protein Dmel_CG31262, isoform B
3R	NT_033777.3	17218922	17219432	-	318649	CG31262	Dmel_CG31262	NP_001163634.1	128	uncharacterized protein Dmel_CG31262, isoform D
3R	NT_033777.3	17219052	17219432	-	318649	CG31262	Dmel_CG31262	NP_001189240.1	89	uncharacterized protein Dmel_CG31262, isoform F
3R	NT_033777.3	17232760	17247538	-	42082	beat-IIb	Dmel_CG4135	NP_001163635.2	404	beat-IIb, isoform C
3R	NT_033777.3	17232760	17247538	-	42082	beat-IIb	Dmel_CG4135	NP_650613.2	407	beat-IIb, isoform A
3R	NT_033777.3	17253874	17254071	-	19835677	CG44259	Dmel_CG44259	NP_001287373.1	65	uncharacterized protein Dmel_CG44259
3R	NT_033777.3	17265476	17265622	+	19835885	CG44257	Dmel_CG44257	NP_001287374.1	48	uncharacterized protein Dmel_CG44257
3R	NT_033777.3	17283814	17284491	+	42084	CG31418	Dmel_CG31418	NP_650615.2	225	uncharacterized protein Dmel_CG31418
3R	NT_033777.3	17284667	17285383	+	326137	CG31419	Dmel_CG31419	NP_732225.2	238	uncharacterized protein Dmel_CG31419
3R	NT_033777.3	17320786	17345582	-	42086	beat-IIa	Dmel_CG14334	NP_001287375.1	431	beaten path IIa, isoform B
3R	NT_033777.3	17320786	17345582	-	42086	beat-IIa	Dmel_CG14334	NP_524384.3	431	beaten path IIa, isoform A
3R	NT_033777.3	17375644	17391162	-	42087	Brf	Dmel_CG31256	NP_650616.2	662	Brf, isoform A
3R	NT_033777.3	17375644	17391162	-	42087	Brf	Dmel_CG31256	NP_001163636.1	662	Brf, isoform B
3R	NT_033777.3	17384652	17388980	+	42089	lute	Dmel_CG43226	NP_001247150.1	727	lute, isoform C
3R	NT_033777.3	17384652	17388980	+	42089	lute	Dmel_CG43226	NP_001247149.1	727	lute, isoform B
3R	NT_033777.3	17386109	17388980	+	42089	lute	Dmel_CG43226	NP_650618.1	677	lute, isoform A
3R	NT_033777.3	17386109	17389154	+	42089	lute	Dmel_CG43226	NP_001262663.1	735	lute, isoform D
3R	NT_033777.3	17391929	17392909	+	42091	sds22	Dmel_CG5851	NP_650619.1	326	sds22
3R	NT_033777.3	17393491	17394259	-	42092	CREG	Dmel_CG5413	NP_732229.1	211	cellular repressor of E1A-stimulated genes, isoform B
3R	NT_033777.3	17393491	17394259	-	42092	CREG	Dmel_CG5413	NP_524385.2	211	cellular repressor of E1A-stimulated genes, isoform A
3R	NT_033777.3	17393491	17394259	-	42092	CREG	Dmel_CG5413	NP_001247152.1	211	cellular repressor of E1A-stimulated genes, isoform D
3R	NT_033777.3	17393523	17394259	-	42092	CREG	Dmel_CG5413	NP_732230.1	173	cellular repressor of E1A-stimulated genes, isoform C
3R	NT_033777.3	17397177	17399499	-	42093	Sur-8	Dmel_CG5407	NP_001262665.1	694	Sur-8, isoform E
3R	NT_033777.3	17397336	17399499	-	42093	Sur-8	Dmel_CG5407	NP_732231.2	641	Sur-8, isoform A
3R	NT_033777.3	17397336	17399499	-	42093	Sur-8	Dmel_CG5407	NP_001262664.1	641	Sur-8, isoform F
3R	NT_033777.3	17397336	17399499	-	42093	Sur-8	Dmel_CG5407	NP_650620.3	641	Sur-8, isoform B
3R	NT_033777.3	17402667	17403205	-	5740605	CG34279	Dmel_CG34279	NP_001097820.2	100	uncharacterized protein Dmel_CG34279, isoform C
3R	NT_033777.3	17402667	17403205	-	5740605	CG34279	Dmel_CG34279	NP_001097819.1	99	uncharacterized protein Dmel_CG34279, isoform A
3R	NT_033777.3	17403382	17403701	-	5740878	CG34280	Dmel_CG34280	NP_001097821.1	82	uncharacterized protein Dmel_CG34280
3R	NT_033777.3	17404535	17405105	-	3885578	CG42823	Dmel_CG42823	NP_001097822.2	151	uncharacterized protein Dmel_CG42823
3R	NT_033777.3	17406071	17406511	-	10178873	CG42824	Dmel_CG42824	NP_001189241.1	146	uncharacterized protein Dmel_CG42824
3R	NT_033777.3	17407001	17407345	+	10178954	CG42798	Dmel_CG42798	NP_001189242.1	97	uncharacterized protein Dmel_CG42798, isoform A
3R	NT_033777.3	17407121	17407345	+	10178954	CG42798	Dmel_CG42798	NP_001262666.1	57	uncharacterized protein Dmel_CG42798, isoform B
3R	NT_033777.3	17407882	17409279	+	42094	CG17283	Dmel_CG17283	NP_650621.1	465	uncharacterized protein Dmel_CG17283
3R	NT_033777.3	17409619	17410731	+	42095	CG5860	Dmel_CG5860	NP_650622.1	370	CG5860
3R	NT_033777.3	17411175	17412362	+	42096	CG5863	Dmel_CG5863	NP_650623.1	395	CG5863
3R	NT_033777.3	17413088	17413541	+	3885579	CG42821	Dmel_CG42821	NP_001034060.2	112	uncharacterized protein Dmel_CG42821
3R	NT_033777.3	17413932	17414399	+	10178916	CG42822	Dmel_CG42822	NP_001189243.1	112	uncharacterized protein Dmel_CG42822
3R	NT_033777.3	17415746	17416474	+	42097	CG5866	Dmel_CG5866	NP_650624.2	223	CG5866
3R	NT_033777.3	17417484	17417930	+	2768672	CG33333	Dmel_CG33333	NP_996225.1	148	uncharacterized protein Dmel_CG33333
3R	NT_033777.3	17418785	17419153	+	10178910	CG42834	Dmel_CG42834	NP_001189244.1	122	uncharacterized protein Dmel_CG42834
3R	NT_033777.3	17420638	17420964	+	10178777	CG42835	Dmel_CG42835	NP_001189245.1	108	uncharacterized protein Dmel_CG42835
3R	NT_033777.3	17421802	17422176	-	42098	CG14332	Dmel_CG14332	NP_650625.1	124	uncharacterized protein Dmel_CG14332
3R	NT_033777.3	17426210	17446122	+	42100	cysu	Dmel_CG5873	NP_650627.1	753	curly Su
3R	NT_033777.3	17434046	17434408	-	14462482	CG44090	Dmel_CG44090	NP_001262667.1	99	uncharacterized protein Dmel_CG44090
3R	NT_033777.3	17439148	17440704	-	42099	CG14331	Dmel_CG14331	NP_001097824.1	312	uncharacterized protein Dmel_CG14331
3R	NT_033777.3	17446889	17447459	-	42101	Eh	Dmel_CG5400	NP_524386.1	97	eclosion hormone, isoform A
3R	NT_033777.3	17446889	17447459	-	42101	Eh	Dmel_CG5400	NP_001262668.1	97	eclosion hormone, isoform B
3R	NT_033777.3	17456507	17456776	-	42102	CG14330	Dmel_CG14330	NP_650628.1	89	uncharacterized protein Dmel_CG14330
3R	NT_033777.3	17474865	17498305	-	42103	Dscam3	Dmel_CG31190	NP_996226.2	2087	down syndrome cell adhesion molecule 3, isoform E
3R	NT_033777.3	17474984	17498305	-	42103	Dscam3	Dmel_CG31190	NP_732242.2	2077	down syndrome cell adhesion molecule 3, isoform F
3R	NT_033777.3	17475649	17498305	-	42103	Dscam3	Dmel_CG31190	NP_001097825.1	2007	down syndrome cell adhesion molecule 3, isoform C
3R	NT_033777.3	17482659	17498305	-	42103	Dscam3	Dmel_CG31190	NP_001097826.1	1006	down syndrome cell adhesion molecule 3, isoform D
3R	NT_033777.3	17532720	17533923	-	42105	CG5823	Dmel_CG5823	NP_001262669.1	283	CG5823, isoform B
3R	NT_033777.3	17532720	17533923	-	42105	CG5823	Dmel_CG5823	NP_650631.1	283	CG5823, isoform A
3R	NT_033777.3	17535036	17536847	+	42106	P5cr-2	Dmel_CG5840	NP_001262670.1	252	Pyrroline-5-carboxylate reductase-like 2, isoform C
3R	NT_033777.3	17535036	17536847	+	42106	P5cr-2	Dmel_CG5840	NP_001262671.1	252	Pyrroline-5-carboxylate reductase-like 2, isoform D
3R	NT_033777.3	17535773	17536847	+	42106	P5cr-2	Dmel_CG5840	NP_650632.1	273	Pyrroline-5-carboxylate reductase-like 2, isoform A
3R	NT_033777.3	17536251	17536847	+	42106	P5cr-2	Dmel_CG5840	NP_732243.1	174	Pyrroline-5-carboxylate reductase-like 2, isoform B
3R	NT_033777.3	17537189	17539863	-	46201	l(3)07882	Dmel_CG5824	NP_001303435.1	852	lethal (3) 07882, isoform B
3R	NT_033777.3	17537189	17539863	-	46201	l(3)07882	Dmel_CG5824	NP_652040.2	852	lethal (3) 07882, isoform A
3R	NT_033777.3	17540625	17543546	+	43912	SF1	Dmel_CG5836	NP_001262673.1	323	splicing factor 1, isoform C
3R	NT_033777.3	17540625	17542533	+	43912	SF1	Dmel_CG5836	NP_001262672.1	347	splicing factor 1, isoform B
3R	NT_033777.3	17540625	17544932	+	43912	SF1	Dmel_CG5836	NP_524654.2	787	splicing factor 1, isoform A
3R	NT_033777.3	17545391	17546388	-	42109	Prx3	Dmel_CG5826	NP_524387.1	234	peroxiredoxin 3
3R	NT_033777.3	17559364	17567926	+	42110	Hmx	Dmel_CG43748	NP_001287376.1	592	H6-like-homeobox, isoform E
3R	NT_033777.3	17559364	17568304	+	42110	Hmx	Dmel_CG43748	NP_001262674.1	718	H6-like-homeobox, isoform D
3R	NT_033777.3	17559364	17567926	+	42110	Hmx	Dmel_CG43748	NP_732244.3	592	H6-like-homeobox, isoform C
3R	NT_033777.3	17594423	17594973	+	42113	CG7587	Dmel_CG7587	NP_732246.1	142	CG7587
3R	NT_033777.3	17595392	17595998	+	42114	Sgs5	Dmel_CG7596	NP_524388.1	163	salivary gland secretion 5
3R	NT_033777.3	17596563	17596763	+	8673956	CG7606	Dmel_CG7606	NP_001163637.1	66	CG7606, isoform B
3R	NT_033777.3	17596563	17596763	+	8673956	CG7606	Dmel_CG7606	NP_001303448.1	66	CG7606, isoform C
3R	NT_033777.3	17606519	17608310	+	42115	sll	Dmel_CG7623	NP_001247153.1	465	slalom, isoform B
3R	NT_033777.3	17606519	17608310	+	42115	sll	Dmel_CG7623	NP_524389.1	465	slalom, isoform A
3R	NT_033777.3	17609423	17610400	+	42116	CG14329	Dmel_CG14329	NP_650636.2	301	uncharacterized protein Dmel_CG14329
3R	NT_033777.3	17610935	17611477	-	42117	Edg91	Dmel_CG7539	NP_524390.2	159	Ecdysone-dependent gene 91, isoform A
3R	NT_033777.3	17610935	17611390	-	42117	Edg91	Dmel_CG7539	NP_001163638.1	151	Ecdysone-dependent gene 91, isoform B
3R	NT_033777.3	17612901	17613291	+	50039	CG34281	Dmel_CG34281	NP_001097828.1	106	uncharacterized protein Dmel_CG34281
3R	NT_033777.3	17614004	17614807	+	42118	CG14327	Dmel_CG14327	NP_650637.1	153	uncharacterized protein Dmel_CG14327, isoform A
3R	NT_033777.3	17614004	17614807	+	42118	CG14327	Dmel_CG14327	NP_001287377.1	153	uncharacterized protein Dmel_CG14327, isoform B
3R	NT_033777.3	17618325	17618775	-	42119	CG14324	Dmel_CG14324	NP_732250.1	131	uncharacterized protein Dmel_CG14324
3R	NT_033777.3	17619133	17619611	+	42120	CG14326	Dmel_CG14326	NP_650639.1	137	uncharacterized protein Dmel_CG14326
3R	NT_033777.3	17621468	17622100	-	42121	CG14323	Dmel_CG14323	NP_732252.1	210	uncharacterized protein Dmel_CG14323
3R	NT_033777.3	17625324	17625946	+	42122	AttD	Dmel_CG7629	NP_524391.2	181	Attacin-D
3R	NT_033777.3	17627127	17629012	+	42123	CG14325	Dmel_CG14325	NP_650641.2	460	uncharacterized protein Dmel_CG14325
3R	NT_033777.3	17644701	17645183	+	12798449	CG43175	Dmel_CG43175	NP_001247154.1	116	uncharacterized protein Dmel_CG43175, isoform A
3R	NT_033777.3	17644779	17645183	+	12798449	CG43175	Dmel_CG43175	NP_001287378.1	90	uncharacterized protein Dmel_CG43175, isoform B
3R	NT_033777.3	17647944	17669127	+	42124	CG14322	Dmel_CG14322	NP_001287379.1	1577	uncharacterized protein Dmel_CG14322, isoform E
3R	NT_033777.3	17647944	17669127	+	42124	CG14322	Dmel_CG14322	NP_001262675.1	1597	uncharacterized protein Dmel_CG14322, isoform B
3R	NT_033777.3	17647944	17669206	+	42124	CG14322	Dmel_CG14322	NP_001262676.1	1580	uncharacterized protein Dmel_CG14322, isoform D
3R	NT_033777.3	17647944	17669127	+	42124	CG14322	Dmel_CG14322	NP_650642.2	1577	uncharacterized protein Dmel_CG14322, isoform A
3R	NT_033777.3	17669397	17670797	-	42125	CG7523	Dmel_CG7523	NP_650643.2	260	CG7523
3R	NT_033777.3	17671371	17673806	+	42126	Mps1	Dmel_CG7643	NP_001262677.1	672	monopolar spindle 1, isoform B
3R	NT_033777.3	17671371	17673708	+	42126	Mps1	Dmel_CG7643	NP_650644.1	630	monopolar spindle 1, isoform A
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_732257.1	842	aluminum tubes, isoform D
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_732256.1	842	aluminum tubes, isoform A
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_996227.1	842	aluminum tubes, isoform B
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_001262679.1	874	aluminum tubes, isoform I
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_732259.1	842	aluminum tubes, isoform F
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_732258.1	842	aluminum tubes, isoform E
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_001262678.1	842	aluminum tubes, isoform H
3R	NT_033777.3	17674889	17678120	-	42127	alt	Dmel_CG18212	NP_650645.1	874	aluminum tubes, isoform G
3R	NT_033777.3	17682789	17683609	+	42128	CG7655	Dmel_CG7655	NP_650646.1	253	CG7655
3R	NT_033777.3	17683809	17684845	-	318645	CG31251	Dmel_CG31251	NP_732260.2	306	uncharacterized protein Dmel_CG31251
3R	NT_033777.3	17685173	17685531	+	318698	CG31360	Dmel_CG31360	NP_732261.1	98	uncharacterized protein Dmel_CG31360
3R	NT_033777.3	17686006	17686965	-	42129	CG31249	Dmel_CG31249	NP_732262.1	250	uncharacterized protein Dmel_CG31249
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_001262681.1	2559	osa, isoform F
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_001262680.1	2555	osa, isoform E
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_996228.1	2556	osa, isoform C
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_524392.2	2716	osa, isoform B
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_001163639.1	2716	osa, isoform D
3R	NT_033777.3	17689818	17716766	-	42130	osa	Dmel_CG7467	NP_732263.1	2703	osa, isoform A
3R	NT_033777.3	17719571	17722786	+	42131	Pxt	Dmel_CG7660	NP_650648.3	809	Peroxinectin-like
3R	NT_033777.3	17724548	17724910	-	42132	Atg8b	Dmel_CG12334	NP_650649.1	120	Autophagy-related 8b, isoform A
3R	NT_033777.3	17724548	17724910	-	42132	Atg8b	Dmel_CG12334	NP_001303480.1	120	Autophagy-related 8b, isoform B
3R	NT_033777.3	17728383	17732816	+	42133	Lgr1	Dmel_CG7665	NP_524393.2	831	Leucine-rich repeat-containing G protein-coupled receptor 1, isoform A
3R	NT_033777.3	17728383	17732816	+	42133	Lgr1	Dmel_CG7665	NP_732265.1	831	Leucine-rich repeat-containing G protein-coupled receptor 1, isoform B
3R	NT_033777.3	17733638	17734085	+	42134	CG14321	Dmel_CG14321	NP_650650.1	121	uncharacterized protein Dmel_CG14321
3R	NT_033777.3	17739935	17745920	+	42135	TyrRII	Dmel_CG16766	NP_001287380.1	586	tyramine receptor II, isoform D
3R	NT_033777.3	17739935	17745920	+	42135	TyrRII	Dmel_CG16766	NP_001262682.1	586	tyramine receptor II, isoform B
3R	NT_033777.3	17739935	17745920	+	42135	TyrRII	Dmel_CG16766	NP_001262683.1	586	tyramine receptor II, isoform C
3R	NT_033777.3	17739935	17745920	+	42135	TyrRII	Dmel_CG16766	NP_650651.1	586	tyramine receptor II, isoform A
3R	NT_033777.3	17752114	17757561	-	42136	TyrR	Dmel_CG7431	NP_650652.1	631	tyramine receptor, isoform A
3R	NT_033777.3	17752114	17757561	-	42136	TyrR	Dmel_CG7431	NP_001287382.1	631	tyramine receptor, isoform C
3R	NT_033777.3	17752114	17757561	-	42136	TyrR	Dmel_CG7431	NP_001287381.1	631	tyramine receptor, isoform B
3R	NT_033777.3	17770034	17783998	-	42137	CG43102	Dmel_CG43102	NP_001262684.1	2468	uncharacterized protein Dmel_CG43102, isoform F
3R	NT_033777.3	17770094	17783998	-	42137	CG43102	Dmel_CG43102	NP_001247155.1	2448	uncharacterized protein Dmel_CG43102, isoform A
3R	NT_033777.3	17770094	17780780	-	42137	CG43102	Dmel_CG43102	NP_001287383.1	1875	uncharacterized protein Dmel_CG43102, isoform G
3R	NT_033777.3	17770094	17779781	-	42137	CG43102	Dmel_CG43102	NP_001247157.1	1542	uncharacterized protein Dmel_CG43102, isoform D
3R	NT_033777.3	17770094	17774287	-	42137	CG43102	Dmel_CG43102	NP_650653.1	1101	uncharacterized protein Dmel_CG43102, isoform E
3R	NT_033777.3	17770094	17784653	-	42137	CG43102	Dmel_CG43102	NP_001247156.1	2519	uncharacterized protein Dmel_CG43102, isoform C
3R	NT_033777.3	17770094	17783998	-	42137	CG43102	Dmel_CG43102	NP_650654.2	2448	uncharacterized protein Dmel_CG43102, isoform B
3R	NT_033777.3	17795365	17796078	+	42139	pasi1	Dmel_CG7713	NP_650655.1	169	pasiflora 1, isoform A
3R	NT_033777.3	17795365	17796078	+	42139	pasi1	Dmel_CG7713	NP_001247158.1	169	pasiflora 1, isoform B
3R	NT_033777.3	17796666	17798109	-	42140	CG7379	Dmel_CG7379	NP_650656.1	433	CG7379
3R	NT_033777.3	17799000	17801161	-	42141	CG17803	Dmel_CG17803	NP_650657.2	587	uncharacterized protein Dmel_CG17803, isoform A
3R	NT_033777.3	17799000	17801161	-	42141	CG17803	Dmel_CG17803	NP_001303488.1	587	uncharacterized protein Dmel_CG17803, isoform B
3R	NT_033777.3	17801795	17803166	-	42142	CG17806	Dmel_CG17806	NP_650658.1	421	uncharacterized protein Dmel_CG17806
3R	NT_033777.3	17803530	17805168	-	42143	CG17802	Dmel_CG17802	NP_650659.2	439	uncharacterized protein Dmel_CG17802
3R	NT_033777.3	17805737	17807069	-	42144	CG17801	Dmel_CG17801	NP_650660.2	381	uncharacterized protein Dmel_CG17801
3R	NT_033777.3	17807654	17809117	-	42145	CG7357	Dmel_CG7357	NP_650661.1	430	CG7357
3R	NT_033777.3	17809580	17811039	-	42146	CG18012	Dmel_CG18012	NP_650662.1	446	uncharacterized protein Dmel_CG18012
3R	NT_033777.3	17852374	17870771	+	42148	tinc	Dmel_CG31247	NP_788688.2	1513	tincar, isoform F
3R	NT_033777.3	17852374	17868562	+	42148	tinc	Dmel_CG31247	NP_732278.2	992	tincar, isoform B
3R	NT_033777.3	17852374	17870771	+	42148	tinc	Dmel_CG31247	NP_788687.3	1513	tincar, isoform E
3R	NT_033777.3	17852374	17870771	+	42148	tinc	Dmel_CG31247	NP_001262686.1	1513	tincar, isoform G
3R	NT_033777.3	17852374	17870771	+	42148	tinc	Dmel_CG31247	NP_788686.1	1513	tincar, isoform A
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001247164.2	1621	Rab3 interacting molecule, isoform Y
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001262687.1	1358	Rab3 interacting molecule, isoform AA
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001247162.2	1631	Rab3 interacting molecule, isoform T
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001247167.2	1941	Rab3 interacting molecule, isoform R
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001247172.2	1399	Rab3 interacting molecule, isoform S
3R	NT_033777.3	17875543	17908740	-	42150	Rim	Dmel_CG33547	NP_001014630.3	1931	Rab3 interacting molecule, isoform Q
3R	NT_033777.3	17875891	17908740	-	42150	Rim	Dmel_CG33547	NP_001247160.1	2792	Rab3 interacting molecule, isoform P
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247161.2	1955	Rab3 interacting molecule, isoform X
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247169.2	2595	Rab3 interacting molecule, isoform W
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247168.1	2798	Rab3 interacting molecule, isoform K
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247163.1	2798	Rab3 interacting molecule, isoform F
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247171.2	1655	Rab3 interacting molecule, isoform Z
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247166.2	1955	Rab3 interacting molecule, isoform U
3R	NT_033777.3	17876992	17908740	-	42150	Rim	Dmel_CG33547	NP_001247170.2	1965	Rab3 interacting molecule, isoform V
3R	NT_033777.3	17906529	17906858	+	42152	CG12347	Dmel_CG12347	NP_650668.1	109	uncharacterized protein Dmel_CG12347, isoform A
3R	NT_033777.3	17906529	17906858	+	42152	CG12347	Dmel_CG12347	NP_001247173.1	109	uncharacterized protein Dmel_CG12347, isoform B
3R	NT_033777.3	17911645	17911911	+	12798450	CG43445	Dmel_CG43445	NP_001247174.1	64	uncharacterized protein Dmel_CG43445
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_732284.5	606	couch potato, isoform N
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_732283.5	606	couch potato, isoform U
3R	NT_033777.3	17966509	18013174	+	45840	cpo	Dmel_CG43738	NP_001262690.1	762	couch potato, isoform Q
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_001262691.1	606	couch potato, isoform W
3R	NT_033777.3	17966509	18011136	+	45840	cpo	Dmel_CG43738	NP_732282.6	749	couch potato, isoform R
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_001014631.3	607	couch potato, isoform T
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_001163640.2	607	couch potato, isoform V
3R	NT_033777.3	17966509	18013174	+	45840	cpo	Dmel_CG43738	NP_001014632.3	962	couch potato, isoform S
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_001262692.1	606	couch potato, isoform X
3R	NT_033777.3	17966509	18013466	+	45840	cpo	Dmel_CG43738	NP_001262689.1	841	couch potato, isoform P
3R	NT_033777.3	17966509	18010111	+	45840	cpo	Dmel_CG43738	NP_524844.6	606	couch potato, isoform Y
3R	NT_033777.3	17966509	18011136	+	45840	cpo	Dmel_CG43738	NP_001262688.1	748	couch potato, isoform O
3R	NT_033777.3	18019413	18021072	+	48228	DNaseII	Dmel_CG7780	NP_650672.1	366	deoxyribonuclease II
3R	NT_033777.3	18021714	18022827	+	42158	CG7785	Dmel_CG7785	NP_650673.1	256	CG7785
3R	NT_033777.3	18023809	18025299	+	42159	CG7794	Dmel_CG7794	NP_650674.1	455	CG7794
3R	NT_033777.3	18045731	18047920	-	42160	htl	Dmel_CG7223	NP_732287.1	729	heartless, isoform C
3R	NT_033777.3	18045731	18047920	-	42160	htl	Dmel_CG7223	NP_732286.1	729	heartless, isoform A
3R	NT_033777.3	18045731	18047920	-	42160	htl	Dmel_CG7223	NP_524394.2	729	heartless, isoform B
3R	NT_033777.3	18081121	18082467	+	42161	CG14317	Dmel_CG14317	NP_650675.1	448	uncharacterized protein Dmel_CG14317
3R	NT_033777.3	18096006	18132481	+	42162	sr	Dmel_CG7847	NP_524395.2	1186	stripe, isoform A
3R	NT_033777.3	18096006	18132736	+	42162	sr	Dmel_CG7847	NP_001262693.1	1271	stripe, isoform D
3R	NT_033777.3	18127022	18132481	+	42162	sr	Dmel_CG7847	NP_001163643.1	717	stripe, isoform C
3R	NT_033777.3	18127022	18132481	+	42162	sr	Dmel_CG7847	NP_001287384.1	906	stripe, isoform E
3R	NT_033777.3	18127022	18132481	+	42162	sr	Dmel_CG7847	NP_732289.1	906	stripe, isoform B
3R	NT_033777.3	18152215	18153560	+	42163	CG14316	Dmel_CG14316	NP_650676.2	430	uncharacterized protein Dmel_CG14316
3R	NT_033777.3	18158770	18159423	+	42164	CG14315	Dmel_CG14315	NP_650677.1	217	uncharacterized protein Dmel_CG14315
3R	NT_033777.3	18161809	18164302	-	42165	CG7218	Dmel_CG7218	NP_650678.1	676	CG7218, isoform A
3R	NT_033777.3	18161809	18164302	-	42165	CG7218	Dmel_CG7218	NP_001287385.1	676	CG7218, isoform B
3R	NT_033777.3	18164729	18165372	+	42166	Cbp20	Dmel_CG12357	NP_524396.1	154	cap binding protein 20
3R	NT_033777.3	18165566	18166462	-	3772662	CG7215	Dmel_CG7215	NP_650679.3	190	peroxiredoxin 5, isoform A
3R	NT_033777.3	18165566	18166462	-	3772662	CG7215	Dmel_CG7215	NP_001027191.1	190	peroxiredoxin 5, isoform B
3R	NT_033777.3	18166727	18167178	-	3772662	CG7215	Dmel_CG7215	NP_001163644.1	130	CG7215, isoform B
3R	NT_033777.3	18166727	18167178	-	3772662	CG7215	Dmel_CG7215	NP_650680.1	130	CG7215, isoform A
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_650681.2	670	PP2A-B\', isoform E
3R	NT_033777.3	18169706	18178608	+	42169	PP2A-B'	Dmel_CG7913	NP_001138070.1	656	PP2A-B\', isoform K
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_732293.1	670	PP2A-B\', isoform D
3R	NT_033777.3	18169706	18178608	+	42169	PP2A-B'	Dmel_CG7913	NP_001247179.1	656	PP2A-B\', isoform O
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_001247176.1	670	PP2A-B\', isoform L
3R	NT_033777.3	18169706	18178046	+	42169	PP2A-B'	Dmel_CG7913	NP_001262695.1	716	PP2A-B\', isoform Q
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_001247177.1	670	PP2A-B\', isoform M
3R	NT_033777.3	18169706	18178046	+	42169	PP2A-B'	Dmel_CG7913	NP_001138071.1	703	PP2A-B\', isoform J
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_001262694.1	683	PP2A-B\', isoform P
3R	NT_033777.3	18169706	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_001247178.1	670	PP2A-B\', isoform N
3R	NT_033777.3	18171484	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_732294.1	554	PP2A-B\', isoform C
3R	NT_033777.3	18173285	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_732296.1	951	PP2A-B\', isoform A
3R	NT_033777.3	18173285	18178046	+	42169	PP2A-B'	Dmel_CG7913	NP_732295.1	984	PP2A-B\', isoform B
3R	NT_033777.3	18175461	18177093	+	42169	PP2A-B'	Dmel_CG7913	NP_001138072.1	438	PP2A-B\', isoform I
3R	NT_033777.3	18179917	18183346	-	42171	cdm	Dmel_CG7212	NP_001262696.1	971	cadmus, isoform B
3R	NT_033777.3	18179917	18183346	-	42171	cdm	Dmel_CG7212	NP_650682.1	971	cadmus, isoform A
3R	NT_033777.3	18183783	18185588	-	42172	CG7208	Dmel_CG7208	NP_650683.3	450	CG7208, isoform A
3R	NT_033777.3	18183783	18185305	-	42172	CG7208	Dmel_CG7208	NP_732298.3	447	CG7208, isoform B
3R	NT_033777.3	18185820	18187824	+	42173	Arp5	Dmel_CG7940	NP_650684.1	648	Actin-related protein 5, isoform A
3R	NT_033777.3	18185820	18187824	+	42173	Arp5	Dmel_CG7940	NP_001262697.1	648	Actin-related protein 5, isoform B
3R	NT_033777.3	18187862	18188605	-	42174	CG12321	Dmel_CG12321	NP_650685.1	247	uncharacterized protein Dmel_CG12321
3R	NT_033777.3	18189130	18191192	+	42175	MED17	Dmel_CG7957	NP_650686.1	642	mediator complex subunit 17
3R	NT_033777.3	18191324	18191803	-	42176	CG14313	Dmel_CG14313	NP_650687.1	135	uncharacterized protein Dmel_CG14313
3R	NT_033777.3	18194984	18196513	-	42177	Ssdp	Dmel_CG7187	NP_001262698.1	509	Sequence-specific single-stranded DNA-binding protein, isoform D
3R	NT_033777.3	18195176	18196513	-	42177	Ssdp	Dmel_CG7187	NP_650688.1	445	Sequence-specific single-stranded DNA-binding protein, isoform A
3R	NT_033777.3	18195176	18196513	-	42177	Ssdp	Dmel_CG7187	NP_732304.1	445	Sequence-specific single-stranded DNA-binding protein, isoform B
3R	NT_033777.3	18195176	18196513	-	42177	Ssdp	Dmel_CG7187	NP_732305.1	445	Sequence-specific single-stranded DNA-binding protein, isoform C
3R	NT_033777.3	18208939	18209220	+	14462483	CG44158	Dmel_CG44158	NP_001262700.1	93	uncharacterized protein Dmel_CG44158
3R	NT_033777.3	18212409	18214588	+	42178	CG7985	Dmel_CG7985	NP_650689.1	708	CG7985, isoform A
3R	NT_033777.3	18212409	18214588	+	42178	CG7985	Dmel_CG7985	NP_001262699.1	708	CG7985, isoform B
3R	NT_033777.3	18216297	18217880	+	42179	CG14314	Dmel_CG14314	NP_650690.1	438	uncharacterized protein Dmel_CG14314
3R	NT_033777.3	18218517	18220223	-	42181	CG7183	Dmel_CG7183	NP_650692.2	568	CG7183, isoform A
3R	NT_033777.3	18218517	18220223	-	42181	CG7183	Dmel_CG7183	NP_001262701.1	568	CG7183, isoform B
3R	NT_033777.3	18220558	18221451	+	42180	CG7988	Dmel_CG7988	NP_650691.1	276	CG7988
3R	NT_033777.3	18221586	18223430	-	42182	mTerf5	Dmel_CG7175	NP_650693.1	560	mitochondrial transcription termination factor 5
3R	NT_033777.3	18223819	18224909	+	42183	Non3	Dmel_CG7993	NP_650694.2	320	novel nucleolar protein 3
3R	NT_033777.3	18224976	18225677	-	42184	CG7168	Dmel_CG7168	NP_650695.1	233	CG7168
3R	NT_033777.3	18226501	18228499	+	42185	Mdh2	Dmel_CG7998	NP_650696.1	336	malate dehydrogenase 2
3R	NT_033777.3	18236497	18238750	+	47285	repo	Dmel_CG31240	NP_477026.1	612	reversed polarity
3R	NT_033777.3	18239892	18242058	-	42187	CG7156	Dmel_CG7156	NP_650697.1	681	CG7156
3R	NT_033777.3	18242846	18248288	+	42186	14-3-3epsilon	Dmel_CG31196	NP_732312.1	256	14-3-3epsilon, isoform C
3R	NT_033777.3	18242846	18248288	+	42186	14-3-3epsilon	Dmel_CG31196	NP_732310.1	261	14-3-3epsilon, isoform B
3R	NT_033777.3	18242846	18248288	+	42186	14-3-3epsilon	Dmel_CG31196	NP_732311.1	260	14-3-3epsilon, isoform D
3R	NT_033777.3	18242846	18248288	+	42186	14-3-3epsilon	Dmel_CG31196	NP_732309.1	262	14-3-3epsilon, isoform A
3R	NT_033777.3	18251144	18251478	+	42188	CG18598	Dmel_CG18598	NP_650698.1	89	uncharacterized protein Dmel_CG18598
3R	NT_033777.3	18251560	18252699	-	42189	CG12320	Dmel_CG12320	NP_650699.1	379	uncharacterized protein Dmel_CG12320, isoform A
3R	NT_033777.3	18251560	18252699	-	42189	CG12320	Dmel_CG12320	NP_001303479.1	379	uncharacterized protein Dmel_CG12320, isoform B
3R	NT_033777.3	18253038	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001014633.2	139	RNA polymerase II subunit Rpb4
3R	NT_033777.3	18253554	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001014637.1	527	transcriptional adaptor 2a, isoform C
3R	NT_033777.3	18253554	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001014636.1	562	transcriptional adaptor 2a, isoform B
3R	NT_033777.3	18253554	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001163645.1	527	transcriptional adaptor 2a, isoform G
3R	NT_033777.3	18253554	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001014635.1	547	transcriptional adaptor 2a, isoform A
3R	NT_033777.3	18253554	18255380	-	326128	Ada2a	Dmel_CG43663	NP_001014634.1	542	transcriptional adaptor 2a, isoform E
3R	NT_033777.3	18255616	18256211	+	59260	Tgs1	Dmel_CG44890	NP_001138073.1	178	modigliani
3R	NT_033777.3	18256208	18257608	+	59260	Tgs1	Dmel_CG44890	NP_732316.2	466	trimethylguanosine synthase 1
3R	NT_033777.3	18269557	18271101	+	42191	CG18599	Dmel_CG18599	NP_650701.1	475	uncharacterized protein Dmel_CG18599
3R	NT_033777.3	18271380	18274353	-	42192	Vps39	Dmel_CG7146	NP_650702.1	876	vacuolar protein sorting 39
3R	NT_033777.3	18274938	18281936	+	44260	eIF-1A	Dmel_CG8053	NP_524728.2	148	eukaryotic initiation factor 1A, isoform A
3R	NT_033777.3	18274938	18281936	+	44260	eIF-1A	Dmel_CG8053	NP_996231.1	148	eukaryotic initiation factor 1A, isoform B
3R	NT_033777.3	18274938	18281936	+	44260	eIF-1A	Dmel_CG8053	NP_001287386.1	148	eukaryotic initiation factor 1A, isoform C
3R	NT_033777.3	18278281	18279285	-	42194	CG7142	Dmel_CG7142	NP_650703.1	334	CG7142
3R	NT_033777.3	18283071	18283454	-	42195	CG14312	Dmel_CG14312	NP_650704.1	108	uncharacterized protein Dmel_CG14312
3R	NT_033777.3	18283734	18286566	+	42196	CG8064	Dmel_CG8064	NP_650705.1	922	CG8064
3R	NT_033777.3	18286965	18288567	-	42197	CG7131	Dmel_CG7131	NP_650706.1	494	CG7131
3R	NT_033777.3	18289579	18291498	-	47260	l(3)05822	Dmel_CG7129	NP_001262702.1	600	lethal (3) 05822, isoform C
3R	NT_033777.3	18289579	18291498	-	47260	l(3)05822	Dmel_CG7129	NP_001262703.1	600	lethal (3) 05822, isoform D
3R	NT_033777.3	18289579	18291498	-	47260	l(3)05822	Dmel_CG7129	NP_732322.1	600	lethal (3) 05822, isoform B
3R	NT_033777.3	18289579	18291498	-	47260	l(3)05822	Dmel_CG7129	NP_652051.1	600	lethal (3) 05822, isoform A
3R	NT_033777.3	18299422	18299757	+	42199	Dlc90F	Dmel_CG12363	NP_477356.1	111	dynein light chain 90F
3R	NT_033777.3	18300373	18301647	-	42201	CG18600	Dmel_CG18600	NP_650708.1	384	uncharacterized protein Dmel_CG18600
3R	NT_033777.3	18302170	18302849	-	42202	CG7126	Dmel_CG7126	NP_650709.2	204	CG7126
3R	NT_033777.3	18303656	18309107	-	42203	PKD	Dmel_CG7125	NP_001262705.1	906	protein kinase D, isoform G
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_732327.3	836	protein kinase D, isoform D
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_650710.3	836	protein kinase D, isoform A
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_001138074.1	836	protein kinase D, isoform E
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_001262704.1	836	protein kinase D, isoform F
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_732326.3	836	protein kinase D, isoform C
3R	NT_033777.3	18303866	18309107	-	42203	PKD	Dmel_CG7125	NP_732325.3	836	protein kinase D, isoform B
3R	NT_033777.3	18306574	18309107	-	42203	PKD	Dmel_CG7125	NP_001262707.1	212	protein kinase D, isoform I
3R	NT_033777.3	18306574	18309107	-	42203	PKD	Dmel_CG7125	NP_001262706.1	212	protein kinase D, isoform H
3R	NT_033777.3	18317224	18328818	-	42204	CG31235	Dmel_CG31235	NP_732328.1	406	uncharacterized protein Dmel_CG31235, isoform A
3R	NT_033777.3	18317224	18328818	-	42204	CG31235	Dmel_CG31235	NP_001287387.1	406	uncharacterized protein Dmel_CG31235, isoform B
3R	NT_033777.3	18352834	18355527	-	42206	CG15803	Dmel_CG15803	NP_650713.2	878	uncharacterized protein Dmel_CG15803, isoform B
3R	NT_033777.3	18352834	18355527	-	42206	CG15803	Dmel_CG15803	NP_001287388.1	880	uncharacterized protein Dmel_CG15803, isoform C
3R	NT_033777.3	18362126	18364183	+	42207	hmw	Dmel_CG7669	NP_650714.1	604	hemingway
3R	NT_033777.3	18364610	18366095	-	42208	WRNexo	Dmel_CG7670	NP_650715.3	353	WRN exonuclease, isoform A
3R	NT_033777.3	18364610	18366095	-	42208	WRNexo	Dmel_CG7670	NP_001163646.1	354	WRN exonuclease, isoform B
3R	NT_033777.3	18364610	18366095	-	42208	WRNexo	Dmel_CG7670	NP_001287389.1	353	WRN exonuclease, isoform C
3R	NT_033777.3	18366720	18367861	+	42209	Nup43	Dmel_CG7671	NP_650716.2	358	nucleoporin 43kD
3R	NT_033777.3	18368577	18371778	-	42210	gl	Dmel_CG7672	NP_001262708.1	679	glass, isoform C
3R	NT_033777.3	18368802	18371778	-	42210	gl	Dmel_CG7672	NP_476854.1	604	glass, isoform A
3R	NT_033777.3	18369339	18371778	-	42210	gl	Dmel_CG7672	NP_732330.1	557	glass, isoform B
3R	NT_033777.3	18378237	18379358	-	42211	CG7675	Dmel_CG7675	NP_732334.1	287	CG7675, isoform A
3R	NT_033777.3	18378237	18380353	-	42211	CG7675	Dmel_CG7675	NP_001287390.1	336	CG7675, isoform D
3R	NT_033777.3	18378237	18379358	-	42211	CG7675	Dmel_CG7675	NP_001287391.1	287	CG7675, isoform E
3R	NT_033777.3	18378237	18379358	-	42211	CG7675	Dmel_CG7675	NP_996233.1	287	CG7675, isoform C
3R	NT_033777.3	18378237	18380353	-	42211	CG7675	Dmel_CG7675	NP_650717.1	336	CG7675, isoform B
3R	NT_033777.3	18381949	18385001	-	42212	CG14309	Dmel_CG14309	NP_650718.2	966	uncharacterized protein Dmel_CG14309
3R	NT_033777.3	18385922	18386748	+	42213	cona	Dmel_CG7676	NP_650719.2	207	corona
3R	NT_033777.3	18386947	18389718	-	42214	Vha100-4	Dmel_CG7678	NP_650720.1	844	vacuolar 
3R	NT_033777.3	18390625	18393388	-	42216	Vha100-2	Dmel_CG18617	NP_650722.1	834	vacuolar 
3R	NT_033777.3	18390625	18393388	-	42216	Vha100-2	Dmel_CG18617	NP_732337.1	834	vacuolar 
3R	NT_033777.3	18399792	18400220	+	42215	Vti1b	Dmel_CG44009	NP_001138075.1	122	vesicle transport through interaction with t-SNAREs 1b, isoform A
3R	NT_033777.3	18399939	18400220	+	42215	Vti1b	Dmel_CG44009	NP_001262709.1	73	vesicle transport through interaction with t-SNAREs 1b, isoform B
3R	NT_033777.3	18400827	18402467	-	42218	CG12333	Dmel_CG12333	NP_650723.1	487	uncharacterized protein Dmel_CG12333
3R	NT_033777.3	18403540	18404445	+	14462485	koko	Dmel_CG44010	NP_732338.1	259	kokopelli, isoform B
3R	NT_033777.3	18403540	18404445	+	14462485	koko	Dmel_CG44010	NP_732341.1	259	kokopelli, isoform E
3R	NT_033777.3	18403540	18404445	+	14462485	koko	Dmel_CG44010	NP_732340.1	259	kokopelli, isoform D
3R	NT_033777.3	18403540	18404445	+	14462485	koko	Dmel_CG44010	NP_732339.1	259	kokopelli, isoform C
3R	NT_033777.3	18405043	18405807	+	42220	CG7685	Dmel_CG7685	NP_650724.1	213	CG7685, isoform A
3R	NT_033777.3	18405043	18405807	+	42220	CG7685	Dmel_CG7685	NP_001262710.1	207	CG7685, isoform B
3R	NT_033777.3	18407465	18409817	-	42221	CG31122	Dmel_CG31122	NP_732342.2	642	uncharacterized protein Dmel_CG31122, isoform A
3R	NT_033777.3	18407882	18409817	-	42221	CG31122	Dmel_CG31122	NP_001163647.1	524	uncharacterized protein Dmel_CG31122, isoform B
3R	NT_033777.3	18407882	18409817	-	42221	CG31122	Dmel_CG31122	NP_001262711.1	525	uncharacterized protein Dmel_CG31122, isoform C
3R	NT_033777.3	18410201	18411370	-	42222	CG10864	Dmel_CG10864	NP_650726.1	389	uncharacterized protein Dmel_CG10864
3R	NT_033777.3	18416777	18435768	-	42226	fru	Dmel_CG14307	NP_524397.2	688	fruitless, isoform F
3R	NT_033777.3	18416777	18515332	-	42226	fru	Dmel_CG14307	NP_732344.1	789	fruitless, isoform B
3R	NT_033777.3	18422077	18435768	-	42226	fru	Dmel_CG14307	NP_001262712.1	882	fruitless, isoform O
3R	NT_033777.3	18422638	18478071	-	42226	fru	Dmel_CG14307	NP_996236.1	705	fruitless, isoform K
3R	NT_033777.3	18422638	18515332	-	42226	fru	Dmel_CG14307	NP_732345.1	796	fruitless, isoform G
3R	NT_033777.3	18422638	18435768	-	42226	fru	Dmel_CG14307	NP_732346.1	695	fruitless, isoform H
3R	NT_033777.3	18426145	18435768	-	42226	fru	Dmel_CG14307	NP_732348.1	854	fruitless, isoform C
3R	NT_033777.3	18426145	18515332	-	42226	fru	Dmel_CG14307	NP_001163648.1	960	fruitless, isoform N
3R	NT_033777.3	18426145	18503979	-	42226	fru	Dmel_CG14307	NP_996237.1	906	fruitless, isoform J
3R	NT_033777.3	18426145	18506519	-	42226	fru	Dmel_CG14307	NP_996238.1	870	fruitless, isoform I
3R	NT_033777.3	18426145	18515332	-	42226	fru	Dmel_CG14307	NP_732347.1	955	fruitless, isoform E
3R	NT_033777.3	18426145	18435768	-	42226	fru	Dmel_CG14307	NP_996235.1	854	fruitless, isoform L
3R	NT_033777.3	18426145	18435768	-	42226	fru	Dmel_CG14307	NP_996234.1	854	fruitless, isoform M
3R	NT_033777.3	18430824	18435768	-	42226	fru	Dmel_CG14307	NP_732349.1	516	fruitless, isoform A
3R	NT_033777.3	18431447	18435768	-	42226	fru	Dmel_CG14307	NP_732350.1	665	fruitless, isoform D
3R	NT_033777.3	18560282	18561265	+	42228	CG7691	Dmel_CG7691	NP_650728.1	283	CG7691
3R	NT_033777.3	18564540	18564719	-	13084062	CG43210	Dmel_CG43210	NP_001247182.1	59	uncharacterized protein Dmel_CG43210, isoform B
3R	NT_033777.3	18564540	18564719	-	13084062	CG43210	Dmel_CG43210	NP_001287392.1	59	uncharacterized protein Dmel_CG43210, isoform D
3R	NT_033777.3	18564540	18564719	-	13084062	CG43210	Dmel_CG43210	NP_001247181.1	59	uncharacterized protein Dmel_CG43210, isoform C
3R	NT_033777.3	18564866	18565132	-	13084062	CG43210	Dmel_CG43210	NP_001287393.1	88	hemotin, isoform B
3R	NT_033777.3	18564866	18565132	-	13084062	CG43210	Dmel_CG43210	NP_001247180.1	88	hemotin, isoform A
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001303449.1	552	frayed, isoform H
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001287395.1	552	frayed, isoform G
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_732352.1	552	frayed, isoform B
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001138078.1	552	frayed, isoform E
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001303450.1	552	frayed, isoform I
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001138079.1	552	frayed, isoform F
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_477308.1	552	frayed, isoform A
3R	NT_033777.3	18586710	18588368	+	44233	fray	Dmel_CG7693	NP_001138077.1	552	frayed, isoform C
3R	NT_033777.3	18590119	18590655	+	42230	CG7694	Dmel_CG7694	NP_650729.1	147	CG7694, isoform A
3R	NT_033777.3	18590119	18590655	+	42230	CG7694	Dmel_CG7694	NP_001287394.1	147	CG7694, isoform C
3R	NT_033777.3	18590119	18590655	+	42230	CG7694	Dmel_CG7694	NP_001138076.1	147	CG7694, isoform B
3R	NT_033777.3	18591100	18649686	+	42236	qin	Dmel_CG43726	NP_650735.3	1857	qin
3R	NT_033777.3	18593018	18620407	-	42232	CG14304	Dmel_CG14304	NP_650731.3	1136	uncharacterized protein Dmel_CG14304, isoform A
3R	NT_033777.3	18593018	18620407	-	42232	CG14304	Dmel_CG14304	NP_001247183.1	942	uncharacterized protein Dmel_CG14304, isoform C
3R	NT_033777.3	18593018	18620407	-	42232	CG14304	Dmel_CG14304	NP_001138080.1	1136	uncharacterized protein Dmel_CG14304, isoform B
3R	NT_033777.3	18598965	18599873	+	42233	CG14305	Dmel_CG14305	NP_650732.1	302	uncharacterized protein Dmel_CG14305, isoform A
3R	NT_033777.3	18598965	18599873	+	42233	CG14305	Dmel_CG14305	NP_732356.1	302	uncharacterized protein Dmel_CG14305, isoform D
3R	NT_033777.3	18598965	18599873	+	42233	CG14305	Dmel_CG14305	NP_732357.1	302	uncharacterized protein Dmel_CG14305, isoform C
3R	NT_033777.3	18616981	18617483	-	42234	CG7695	Dmel_CG7695	NP_650733.1	145	CG7695
3R	NT_033777.3	18629673	18640724	-	42235	CG14301	Dmel_CG14301	NP_650734.2	196	uncharacterized protein Dmel_CG14301
3R	NT_033777.3	18651141	18656983	-	42237	CG31224	Dmel_CG31224	NP_001287396.1	1784	uncharacterized protein Dmel_CG31224, isoform B
3R	NT_033777.3	18651141	18656983	-	42237	CG31224	Dmel_CG31224	NP_732361.1	1784	uncharacterized protein Dmel_CG31224, isoform A
3R	NT_033777.3	18651141	18656983	-	42237	CG31224	Dmel_CG31224	NP_001287397.1	1784	uncharacterized protein Dmel_CG31224, isoform C
3R	NT_033777.3	18659705	18661027	+	42239	CstF-64	Dmel_CG7697	NP_477453.1	419	cleavage stimulation factor 64 kilodalton subunit
3R	NT_033777.3	18661159	18663455	-	42240	Cpsf73	Dmel_CG7698	NP_650738.1	684	cleavage and polyadenylation specificity factor 73
3R	NT_033777.3	18663796	18665170	+	248102	Gos28	Dmel_CG7700	NP_650739.2	232	golgi SNARE, 28 kDa
3R	NT_033777.3	18665454	18667625	+	318638	CG31231	Dmel_CG31231	NP_732363.1	679	uncharacterized protein Dmel_CG31231
3R	NT_033777.3	18667985	18669027	+	318636	CG31229	Dmel_CG31229	NP_732364.1	195	uncharacterized protein Dmel_CG31229
3R	NT_033777.3	18671351	18674411	+	42242	CG7702	Dmel_CG7702	NP_732365.1	537	CG7702, isoform B
3R	NT_033777.3	18671351	18674411	+	42242	CG7702	Dmel_CG7702	NP_650740.1	537	CG7702, isoform A
3R	NT_033777.3	18671736	18671915	+	318637	CG31230	Dmel_CG31230	NP_732366.1	59	uncharacterized protein Dmel_CG31230
3R	NT_033777.3	18675129	18677493	-	42243	CG7705	Dmel_CG7705	NP_650741.1	592	CG7705, isoform A
3R	NT_033777.3	18676886	18677493	-	42243	CG7705	Dmel_CG7705	NP_732368.1	157	CG7705, isoform B
3R	NT_033777.3	18677914	18680204	+	42244	CG7706	Dmel_CG7706	NP_650742.2	726	CG7706
3R	NT_033777.3	18680998	18681078	+	30522407	CG46318	Dmel_CG46318	NP_001334694.1	26	uncharacterized protein Dmel_CG46318
3R	NT_033777.3	18682440	18684662	+	30522407	CG46318	Dmel_CG46318	NP_732369.1	614	CG7708, isoform B
3R	NT_033777.3	18682440	18684662	+	30522407	CG46318	Dmel_CG46318	NP_650743.1	614	CG7708, isoform A
3R	NT_033777.3	18687814	18692719	-	42246	Muc91C	Dmel_CG7709	NP_650744.1	950	mucin 91C, isoform A
3R	NT_033777.3	18687814	18692719	-	42246	Muc91C	Dmel_CG7709	NP_001287398.1	949	mucin 91C, isoform B
3R	NT_033777.3	18693320	18693666	-	3346166	CG14300	Dmel_CG14300	NP_001014639.1	94	uncharacterized protein Dmel_CG14300
3R	NT_033777.3	18695266	18695619	+	42248	CG34282	Dmel_CG34282	NP_001097830.1	94	uncharacterized protein Dmel_CG34282, isoform A
3R	NT_033777.3	18695266	18695619	+	42248	CG34282	Dmel_CG34282	NP_001303509.1	94	uncharacterized protein Dmel_CG34282, isoform B
3R	NT_033777.3	18705929	18730927	+	42249	ChAT	Dmel_CG12345	NP_996239.2	714	choline acetyltransferase, isoform B
3R	NT_033777.3	18705929	18730927	+	42249	ChAT	Dmel_CG12345	NP_477004.5	721	choline acetyltransferase, isoform A
3R	NT_033777.3	18712810	18714546	+	42795	VAChT	Dmel_CG32848	NP_477138.1	578	vesicular acetylcholine transporter
3R	NT_033777.3	18722004	18722522	-	5740817	CG34283	Dmel_CG34283	NP_001097831.1	153	uncharacterized protein Dmel_CG34283
3R	NT_033777.3	18725592	18726352	-	42250	CG7714	Dmel_CG7714	NP_650747.1	225	CG7714
3R	NT_033777.3	18727685	18728414	-	42251	CG7715	Dmel_CG7715	NP_650748.2	218	CG7715
3R	NT_033777.3	18732706	18732994	+	42252	CG14302	Dmel_CG14302	NP_650749.2	71	uncharacterized protein Dmel_CG14302
3R	NT_033777.3	18733278	18738555	-	42253	Mekk1	Dmel_CG7717	NP_650750.4	1478	Mekk1, isoform D
3R	NT_033777.3	18733278	18743236	-	42253	Mekk1	Dmel_CG7717	NP_732373.1	1571	Mekk1, isoform B
3R	NT_033777.3	18744251	18745793	-	42254	CG7718	Dmel_CG7718	NP_650751.3	494	CG7718
3R	NT_033777.3	18746572	18750004	+	45969	gwl	Dmel_CG7719	NP_001262713.1	803	greatwall, isoform B
3R	NT_033777.3	18746572	18750004	+	45969	gwl	Dmel_CG7719	NP_524860.2	846	greatwall, isoform A
3R	NT_033777.3	18750572	18758770	-	42256	Epg5	Dmel_CG14299	NP_650752.2	2455	ectopic P-granules autophagy protein 5, isoform C
3R	NT_033777.3	18750572	18758770	-	42256	Epg5	Dmel_CG14299	NP_001247184.1	2454	ectopic P-granules autophagy protein 5, isoform D
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_732375.1	681	CG7720, isoform A
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_001163651.1	681	CG7720, isoform E
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_001163650.1	681	CG7720, isoform D
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_650753.1	681	CG7720, isoform B
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_001163649.1	681	CG7720, isoform C
3R	NT_033777.3	18759468	18769082	-	42257	CG7720	Dmel_CG7720	NP_001287399.1	681	CG7720, isoform F
3R	NT_033777.3	18806028	18848391	-	42258	CG18208	Dmel_CG18208	NP_001262715.1	740	uncharacterized protein Dmel_CG18208, isoform B
3R	NT_033777.3	18806151	18848391	-	42258	CG18208	Dmel_CG18208	NP_001262714.1	670	uncharacterized protein Dmel_CG18208, isoform C
3R	NT_033777.3	18806151	18848391	-	42258	CG18208	Dmel_CG18208	NP_650754.2	699	uncharacterized protein Dmel_CG18208, isoform A
3R	NT_033777.3	18851492	18851650	-	318633	CG31226	Dmel_CG31226	NP_732379.1	52	uncharacterized protein Dmel_CG31226, isoform B
3R	NT_033777.3	18851492	18851650	-	318633	CG31226	Dmel_CG31226	NP_732378.1	52	uncharacterized protein Dmel_CG31226, isoform A
3R	NT_033777.3	18875785	18876922	+	42259	CG14298	Dmel_CG14298	NP_650755.1	111	uncharacterized protein Dmel_CG14298, isoform A
3R	NT_033777.3	18875785	18876922	+	42259	CG14298	Dmel_CG14298	NP_001262716.1	111	uncharacterized protein Dmel_CG14298, isoform B
3R	NT_033777.3	18898293	18899235	+	42260	CG14297	Dmel_CG14297	NP_650756.1	250	uncharacterized protein Dmel_CG14297
3R	NT_033777.3	18899478	18900855	+	42261	Rh2	Dmel_CG16740	NP_524398.1	381	rhodopsin 2
3R	NT_033777.3	18901770	18902189	-	42262	CG14294	Dmel_CG14294	NP_650757.3	139	uncharacterized protein Dmel_CG14294
3R	NT_033777.3	18902457	18902907	-	5740234	CG34284	Dmel_CG34284	NP_001097832.1	124	uncharacterized protein Dmel_CG34284
3R	NT_033777.3	18905025	18905606	-	42264	CG14292	Dmel_CG14292	NP_650759.1	168	uncharacterized protein Dmel_CG14292
3R	NT_033777.3	18907267	18908376	+	42265	EndoA	Dmel_CG14296	NP_732383.1	369	endophilin A, isoform A
3R	NT_033777.3	18907267	18908376	+	42265	EndoA	Dmel_CG14296	NP_620122.2	369	endophilin A, isoform B
3R	NT_033777.3	18907267	18908376	+	42265	EndoA	Dmel_CG14296	NP_001262717.1	369	endophilin A, isoform C
3R	NT_033777.3	18911260	18912834	-	42266	CG14291	Dmel_CG14291	NP_650760.1	524	uncharacterized protein Dmel_CG14291
3R	NT_033777.3	18920632	18926504	+	42267	Xrp1	Dmel_CG17836	NP_650761.2	668	Xrp1, isoform B
3R	NT_033777.3	18920632	18926504	+	42267	Xrp1	Dmel_CG17836	NP_001262718.1	668	Xrp1, isoform F
3R	NT_033777.3	18920632	18926504	+	42267	Xrp1	Dmel_CG17836	NP_732384.1	668	Xrp1, isoform A
3R	NT_033777.3	18920632	18926504	+	42267	Xrp1	Dmel_CG17836	NP_001262719.1	668	Xrp1, isoform G
3R	NT_033777.3	18925176	18926504	+	42267	Xrp1	Dmel_CG17836	NP_732385.1	406	Xrp1, isoform C
3R	NT_033777.3	18925176	18926504	+	42267	Xrp1	Dmel_CG17836	NP_001097833.1	406	Xrp1, isoform E
3R	NT_033777.3	18925176	18926504	+	42267	Xrp1	Dmel_CG17836	NP_732386.1	406	Xrp1, isoform D
3R	NT_033777.3	18927498	18928256	-	42268	Mpc1	Dmel_CG14290	NP_001262720.1	107	mitochondrial pyruvate carrier, isoform C
3R	NT_033777.3	18927498	18928256	-	42268	Mpc1	Dmel_CG14290	NP_650762.1	107	mitochondrial pyruvate carrier, isoform B
3R	NT_033777.3	18947299	18975253	+	42269	CG42613	Dmel_CG42613	NP_001247187.1	1051	uncharacterized protein Dmel_CG42613, isoform G
3R	NT_033777.3	18947299	18975780	+	42269	CG42613	Dmel_CG42613	NP_732390.3	1155	uncharacterized protein Dmel_CG42613, isoform H
3R	NT_033777.3	18947299	18975780	+	42269	CG42613	Dmel_CG42613	NP_001247185.1	1188	uncharacterized protein Dmel_CG42613, isoform E
3R	NT_033777.3	18958428	18958538	+	14462486	CG43732	Dmel_CG43732	NP_001303510.1	36	uncharacterized protein Dmel_CG43732, isoform B
3R	NT_033777.3	18958428	18958538	+	14462486	CG43732	Dmel_CG43732	NP_001262721.1	36	uncharacterized protein Dmel_CG43732, isoform A
3R	NT_033777.3	18969785	18975780	+	14462486	CG43732	Dmel_CG43732	NP_001247186.1	845	uncharacterized protein Dmel_CG42613, isoform F
3R	NT_033777.3	18978375	18978773	-	42271	euc	Dmel_CG12269	NP_001247188.1	112	eucalyptus, isoform B
3R	NT_033777.3	18978375	18978773	-	42271	euc	Dmel_CG12269	NP_650765.1	107	eucalyptus, isoform A
3R	NT_033777.3	18979063	18980845	-	42272	Smu1	Dmel_CG5451	NP_650766.1	509	Smu1 spliceosomal factor, isoform A
3R	NT_033777.3	18979063	18980845	-	42272	Smu1	Dmel_CG5451	NP_001247190.1	509	Smu1 spliceosomal factor, isoform C
3R	NT_033777.3	18979063	18980845	-	42272	Smu1	Dmel_CG5451	NP_001247189.1	509	Smu1 spliceosomal factor, isoform B
3R	NT_033777.3	18981572	18982457	+	42273	dnk	Dmel_CG5452	NP_524399.1	250	deoxyribonucleoside kinase, isoform A
3R	NT_033777.3	18981572	18982457	+	42273	dnk	Dmel_CG5452	NP_001262722.1	250	deoxyribonucleoside kinase, isoform B
3R	NT_033777.3	18983103	18983540	-	42274	snRNP-U1-C	Dmel_CG5454	NP_650767.1	145	small ribonucleoprotein particle U1 subunit C
3R	NT_033777.3	18984506	19019499	+	53563	gukh	Dmel_CG31043	NP_001097834.2	1764	GUK-holder, isoform E
3R	NT_033777.3	18984506	19022016	+	53563	gukh	Dmel_CG31043	NP_001027192.1	1044	GUK-holder, isoform C
3R	NT_033777.3	18984506	19020947	+	53563	gukh	Dmel_CG31043	NP_732394.1	534	GUK-holder, isoform B
3R	NT_033777.3	18984506	19022016	+	53563	gukh	Dmel_CG31043	NP_732393.1	1788	GUK-holder, isoform A
3R	NT_033777.3	19022853	19023944	-	42279	CG6005	Dmel_CG6005	NP_001287400.1	324	CG6005, isoform B
3R	NT_033777.3	19022853	19023944	-	42279	CG6005	Dmel_CG6005	NP_650771.1	324	CG6005, isoform A
3R	NT_033777.3	19024147	19024749	+	42280	CG14286	Dmel_CG14286	NP_650772.1	200	uncharacterized protein Dmel_CG14286
3R	NT_033777.3	19025120	19026129	+	42281	CG14285	Dmel_CG14285	NP_650773.1	297	uncharacterized protein Dmel_CG14285
3R	NT_033777.3	19026202	19028751	-	42283	GatA	Dmel_CG6007	NP_650775.2	508	Glutamyl-tRNA amidotransferase, subunit A
3R	NT_033777.3	19027448	19027900	+	42282	NP15.6	Dmel_CG6008	NP_650774.1	150	NP15.6
3R	NT_033777.3	19029169	19030072	+	42284	P5cr	Dmel_CG6009	NP_524400.2	280	pyrroline 5-carboyxlate reductase
3R	NT_033777.3	19030171	19031193	-	42285	Prp18	Dmel_CG6011	NP_650776.1	340	Prp18
3R	NT_033777.3	19031571	19032275	+	42286	CG6013	Dmel_CG6013	NP_650777.1	213	CG6013
3R	NT_033777.3	19039512	19044243	+	42287	CG6026	Dmel_CG6026	NP_650778.2	1555	CG6026
3R	NT_033777.3	19046617	19087782	-	42289	cdi	Dmel_CG6027	NP_524401.2	1213	center divider, isoform A
3R	NT_033777.3	19047704	19087782	-	42289	cdi	Dmel_CG6027	NP_001247191.1	942	center divider, isoform B
3R	NT_033777.3	19094439	19094818	-	42290	mRpL55	Dmel_CG14283	NP_650780.1	107	mitochondrial ribosomal protein L55
3R	NT_033777.3	19095409	19095945	+	42291	ATPsynD	Dmel_CG6030	NP_732400.1	178	ATP synthase, subunit D, isoform B
3R	NT_033777.3	19095409	19095945	+	42291	ATPsynD	Dmel_CG6030	NP_524402.1	178	ATP synthase, subunit D, isoform A
3R	NT_033777.3	19095409	19095945	+	42291	ATPsynD	Dmel_CG6030	NP_001287401.1	178	ATP synthase, subunit D, isoform C
3R	NT_033777.3	19124000	19131461	+	42292	CG6040	Dmel_CG6040	NP_650781.2	1784	CG6040
3R	NT_033777.3	19132685	19134532	+	42293	Cyp12a5	Dmel_CG11821	NP_650782.1	536	Cyp12a5
3R	NT_033777.3	19135209	19137101	+	42294	Cyp12a4	Dmel_CG6042	NP_650783.2	536	Cyp12a4
3R	NT_033777.3	19141416	19147260	-	42295	Ppcs	Dmel_CG5629	NP_650784.3	373	phosphopantothenoylcysteine synthetase, isoform C
3R	NT_033777.3	19141596	19147260	-	42295	Ppcs	Dmel_CG5629	NP_732401.1	313	phosphopantothenoylcysteine synthetase, isoform A
3R	NT_033777.3	19141596	19147260	-	42295	Ppcs	Dmel_CG5629	NP_001303433.1	313	phosphopantothenoylcysteine synthetase, isoform D
3R	NT_033777.3	19149038	19153462	-	42296	CG5835	Dmel_CG5835	NP_650785.1	237	CG5835
3R	NT_033777.3	19155133	19156661	-	42298	CG11779	Dmel_CG11779	NP_001027193.2	428	uncharacterized protein Dmel_CG11779, isoform E
3R	NT_033777.3	19155133	19156661	-	42298	CG11779	Dmel_CG11779	NP_732403.1	428	uncharacterized protein Dmel_CG11779, isoform B
3R	NT_033777.3	19155133	19159705	-	42298	CG11779	Dmel_CG11779	NP_650786.2	459	uncharacterized protein Dmel_CG11779, isoform A
3R	NT_033777.3	19157501	19159322	+	42297	nos	Dmel_CG5637	NP_476658.1	401	nanos, isoform A
3R	NT_033777.3	19157501	19159322	+	42297	nos	Dmel_CG5637	NP_001262723.1	382	nanos, isoform B
3R	NT_033777.3	19160233	19162238	-	7354421	Nsun5	Dmel_CG42358	NP_650787.1	433	Nop2/Sun-like domain containing protein 5
3R	NT_033777.3	19161352	19161750	-	42299	CG42359	Dmel_CG42359	NP_732404.2	132	uncharacterized protein Dmel_CG42359
3R	NT_033777.3	19168035	19169822	+	42300	sqz	Dmel_CG5557	NP_524403.1	535	squeeze
3R	NT_033777.3	19177052	19177933	+	42301	CG14282	Dmel_CG14282	NP_650788.1	293	uncharacterized protein Dmel_CG14282
3R	NT_033777.3	19178258	19180420	-	42302	CG5555	Dmel_CG5555	NP_001262724.1	558	CG5555, isoform B
3R	NT_033777.3	19178258	19180187	-	42302	CG5555	Dmel_CG5555	NP_650789.1	555	CG5555, isoform A
3R	NT_033777.3	19190080	19200852	+	42303	CG31475	Dmel_CG31475	NP_001262725.1	418	uncharacterized protein Dmel_CG31475, isoform B
3R	NT_033777.3	19190080	19200852	+	42303	CG31475	Dmel_CG31475	NP_732406.1	418	uncharacterized protein Dmel_CG31475, isoform A
3R	NT_033777.3	19212341	19215362	+	42305	cry	Dmel_CG3772	NP_732407.1	542	cryptochrome
3R	NT_033777.3	19217893	19226031	-	42306	vib	Dmel_CG5269	NP_001287402.1	272	vibrator, isoform C
3R	NT_033777.3	19217893	19226031	-	42306	vib	Dmel_CG5269	NP_001262726.1	273	vibrator, isoform B
3R	NT_033777.3	19217893	19226031	-	42306	vib	Dmel_CG5269	NP_524404.1	272	vibrator, isoform A
3R	NT_033777.3	19227046	19228107	-	42307	CG11703	Dmel_CG11703	NP_650792.1	353	uncharacterized protein Dmel_CG11703
3R	NT_033777.3	19228292	19229227	-	42308	CG5250	Dmel_CG5250	NP_650793.1	311	CG5250
3R	NT_033777.3	19229498	19230727	+	42309	CG3773	Dmel_CG3773	NP_650794.1	368	CG3773
3R	NT_033777.3	19230861	19245791	-	42310	unc79	Dmel_CG5237	NP_001287404.1	2781	uncoordinated 79, isoform F
3R	NT_033777.3	19230861	19245791	-	42310	unc79	Dmel_CG5237	NP_001163652.1	2776	uncoordinated 79, isoform B
3R	NT_033777.3	19230861	19245791	-	42310	unc79	Dmel_CG5237	NP_650795.2	3028	uncoordinated 79, isoform C
3R	NT_033777.3	19230861	19245791	-	42310	unc79	Dmel_CG5237	NP_001287403.1	2783	uncoordinated 79, isoform E
3R	NT_033777.3	19242358	19245791	-	42310	unc79	Dmel_CG5237	NP_001163653.1	943	uncoordinated 79, isoform D
3R	NT_033777.3	19247269	19248027	-	42311	CG5217	Dmel_CG5217	NP_650796.1	215	CG5217
3R	NT_033777.3	19257706	19259882	+	42312	CG14280	Dmel_CG14280	NP_001287405.1	555	uncharacterized protein Dmel_CG14280, isoform B
3R	NT_033777.3	19257706	19259882	+	42312	CG14280	Dmel_CG14280	NP_650797.1	555	uncharacterized protein Dmel_CG14280, isoform A
3R	NT_033777.3	19297397	19297528	-	14462489	CG44174	Dmel_CG44174	NP_001262728.1	43	uncharacterized protein Dmel_CG44174
3R	NT_033777.3	19304828	19325538	-	42313	Dl	Dmel_CG3619	NP_732412.1	833	delta, isoform B
3R	NT_033777.3	19304828	19325538	-	42313	Dl	Dmel_CG3619	NP_001247193.1	833	delta, isoform C
3R	NT_033777.3	19304828	19325538	-	42313	Dl	Dmel_CG3619	NP_477264.1	833	delta, isoform A
3R	NT_033777.3	19354116	19354354	+	12798476	CG43203	Dmel_CG43203	NP_001247194.1	61	uncharacterized protein Dmel_CG43203
3R	NT_033777.3	19369163	19402995	-	42314	Ino80	Dmel_CG31212	NP_732413.1	1638	INO80 complex subunit
3R	NT_033777.3	19373897	19374658	-	42315	CG3581	Dmel_CG3581	NP_650799.1	253	CG3581
3R	NT_033777.3	19375141	19375965	-	318714	CG31404	Dmel_CG31404	NP_732414.1	274	uncharacterized protein Dmel_CG31404
3R	NT_033777.3	19376269	19377048	-	42316	CG31245	Dmel_CG31245	NP_732415.1	237	uncharacterized protein Dmel_CG31245
3R	NT_033777.3	19387994	19389802	+	42318	CG3734	Dmel_CG3734	NP_650802.1	473	CG3734, isoform A
3R	NT_033777.3	19387994	19389802	+	42318	CG3734	Dmel_CG3734	NP_001287406.1	473	CG3734, isoform B
3R	NT_033777.3	19390285	19392024	+	42319	CG18493	Dmel_CG18493	NP_650803.1	480	uncharacterized protein Dmel_CG18493
3R	NT_033777.3	19393376	19395076	+	42320	CG3739	Dmel_CG3739	NP_650804.2	485	CG3739
3R	NT_033777.3	19397517	19398482	-	326129	CG31244	Dmel_CG31244	NP_732419.1	321	uncharacterized protein Dmel_CG31244
3R	NT_033777.3	19403670	19406002	+	42322	CG5316	Dmel_CG5316	NP_732421.1	662	CG5316, isoform C
3R	NT_033777.3	19403670	19406002	+	42322	CG5316	Dmel_CG5316	NP_650805.1	662	CG5316, isoform B
3R	NT_033777.3	19403670	19404159	+	42322	CG5316	Dmel_CG5316	NP_732422.1	139	CG5316, isoform A
3R	NT_033777.3	19404579	19406002	+	42322	CG5316	Dmel_CG5316	NP_001247195.2	443	CG5316, isoform E
3R	NT_033777.3	19409323	19410738	+	42323	CG11626	Dmel_CG11626	NP_001097835.1	379	uncharacterized protein Dmel_CG11626
3R	NT_033777.3	19416205	19457267	+	42325	CG31221	Dmel_CG31221	NP_732425.1	219	uncharacterized protein Dmel_CG31221, isoform B
3R	NT_033777.3	19416205	19457267	+	42325	CG31221	Dmel_CG31221	NP_732424.1	219	uncharacterized protein Dmel_CG31221, isoform A
3R	NT_033777.3	19416205	19457372	+	42325	CG31221	Dmel_CG31221	NP_001262729.1	254	uncharacterized protein Dmel_CG31221, isoform C
3R	NT_033777.3	19423909	19425057	-	42324	CG3517	Dmel_CG3517	NP_650807.1	382	CG3517
3R	NT_033777.3	19461348	19594379	+	42327	Dys	Dmel_CG34157	NP_001262730.1	3228	dystrophin, isoform I
3R	NT_033777.3	19461348	19594657	+	42327	Dys	Dmel_CG34157	NP_001036728.1	3529	dystrophin, isoform F
3R	NT_033777.3	19461936	19462964	-	42326	CG6255	Dmel_CG6255	NP_650809.1	342	CG6255
3R	NT_033777.3	19464825	19594657	+	42327	Dys	Dmel_CG34157	NP_001036723.1	3497	dystrophin, isoform A
3R	NT_033777.3	19464825	19594657	+	42327	Dys	Dmel_CG34157	NP_001036722.1	3598	dystrophin, isoform H
3R	NT_033777.3	19464825	19594657	+	42327	Dys	Dmel_CG34157	NP_001036724.1	3127	dystrophin, isoform C
3R	NT_033777.3	19464825	19594657	+	42327	Dys	Dmel_CG34157	NP_001262732.1	3144	dystrophin, isoform K
3R	NT_033777.3	19476993	19594657	+	42327	Dys	Dmel_CG34157	NP_001036726.1	3504	dystrophin, isoform G
3R	NT_033777.3	19488150	19594657	+	42327	Dys	Dmel_CG34157	NP_001262733.1	1323	dystrophin, isoform L
3R	NT_033777.3	19489808	19490972	-	42328	CG15025	Dmel_CG15025	NP_650810.1	343	uncharacterized protein Dmel_CG15025
3R	NT_033777.3	19503860	19594657	+	42327	Dys	Dmel_CG34157	NP_001036721.1	1669	dystrophin, isoform B
3R	NT_033777.3	19524625	19594657	+	42327	Dys	Dmel_CG34157	NP_001036725.1	1854	dystrophin, isoform D
3R	NT_033777.3	19585708	19594657	+	42327	Dys	Dmel_CG34157	NP_001262731.1	1152	dystrophin, isoform J
3R	NT_033777.3	19585708	19594657	+	42327	Dys	Dmel_CG34157	NP_001036727.1	1051	dystrophin, isoform E
3R	NT_033777.3	19597763	19598834	-	42333	Cpr92A	Dmel_CG6240	NP_650813.2	245	cuticular protein 92A
3R	NT_033777.3	19600674	19602596	+	42334	CG7333	Dmel_CG7333	NP_650814.2	541	CG7333
3R	NT_033777.3	19604111	19606278	+	42335	CG7342	Dmel_CG7342	NP_650815.2	540	CG7342, isoform A
3R	NT_033777.3	19604111	19606278	+	42335	CG7342	Dmel_CG7342	NP_001247196.1	540	CG7342, isoform B
3R	NT_033777.3	19607281	19609285	+	42336	CG17751	Dmel_CG17751	NP_650816.3	533	uncharacterized protein Dmel_CG17751
3R	NT_033777.3	19610267	19612380	+	42337	CG17752	Dmel_CG17752	NP_650817.1	538	uncharacterized protein Dmel_CG17752
3R	NT_033777.3	19613501	19615528	+	42338	CG16727	Dmel_CG16727	NP_650818.1	545	uncharacterized protein Dmel_CG16727
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_650819.1	585	CG6231, isoform A
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_732437.1	585	CG6231, isoform D
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_001262735.1	585	CG6231, isoform F
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_001262734.1	585	CG6231, isoform E
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_732436.1	585	CG6231, isoform C
3R	NT_033777.3	19616638	19619183	-	42339	CG6231	Dmel_CG6231	NP_732435.1	585	CG6231, isoform B
3R	NT_033777.3	19633929	19639304	-	42340	subdued	Dmel_CG16718	NP_001262736.1	926	subdued, isoform E
3R	NT_033777.3	19633929	19642415	-	42340	subdued	Dmel_CG16718	NP_650820.1	1075	subdued, isoform A
3R	NT_033777.3	19633929	19639304	-	42340	subdued	Dmel_CG16718	NP_732439.1	926	subdued, isoform B
3R	NT_033777.3	19633929	19642415	-	42340	subdued	Dmel_CG16718	NP_001189248.1	1099	subdued, isoform D
3R	NT_033777.3	19633929	19639304	-	42340	subdued	Dmel_CG16718	NP_001262737.1	950	subdued, isoform F
3R	NT_033777.3	19635020	19635790	+	4379856	CG34138	Dmel_CG34138	NP_001036729.2	195	uncharacterized protein Dmel_CG34138
3R	NT_033777.3	19643508	19644287	-	42341	Vha13	Dmel_CG6213	NP_477437.1	117	vacuolar 
3R	NT_033777.3	19643508	19644287	-	42341	Vha13	Dmel_CG6213	NP_001287407.1	117	vacuolar 
3R	NT_033777.3	19645165	19646866	+	42342	Nup58	Dmel_CG7360	NP_650821.2	546	nucleoporin 58kD
3R	NT_033777.3	19646970	19648292	-	42343	CG6195	Dmel_CG6195	NP_650822.1	363	CG6195
3R	NT_033777.3	19648841	19650532	+	326126	CG31220	Dmel_CG31220	NP_732440.2	363	uncharacterized protein Dmel_CG31220
3R	NT_033777.3	19651030	19652341	+	42344	CG31219	Dmel_CG31219	NP_001097837.1	345	uncharacterized protein Dmel_CG31219
3R	NT_033777.3	19652617	19657656	-	42345	CG6184	Dmel_CG6184	NP_732443.4	1029	CG6184, isoform F
3R	NT_033777.3	19652617	19657656	-	42345	CG6184	Dmel_CG6184	NP_732444.2	973	CG6184, isoform E
3R	NT_033777.3	19652617	19656327	-	42345	CG6184	Dmel_CG6184	NP_650824.1	989	CG6184, isoform A
3R	NT_033777.3	19661592	19663320	+	45910	ort	Dmel_CG7411	NP_524406.1	485	ora transientless
3R	NT_033777.3	19665555	19670620	+	42347	CG7432	Dmel_CG7432	NP_650825.2	721	CG7432
3R	NT_033777.3	19687212	19698183	+	42348	Naam	Dmel_CG31216	NP_001262738.1	357	nicotinamide amidase, isoform B
3R	NT_033777.3	19687212	19698183	+	42348	Naam	Dmel_CG31216	NP_732446.1	357	nicotinamide amidase, isoform A
3R	NT_033777.3	19715511	19715833	-	5740178	CG34286	Dmel_CG34286	NP_001262739.1	88	uncharacterized protein Dmel_CG34286, isoform B
3R	NT_033777.3	19715511	19715833	-	5740178	CG34286	Dmel_CG34286	NP_001097838.1	88	uncharacterized protein Dmel_CG34286, isoform A
3R	NT_033777.3	19752618	19774708	+	42350	GluClalpha	Dmel_CG7535	NP_001034061.2	447	GluClalpha, isoform H
3R	NT_033777.3	19752618	19764599	+	42350	GluClalpha	Dmel_CG7535	NP_001163655.1	349	GluClalpha, isoform F
3R	NT_033777.3	19752618	19767646	+	42350	GluClalpha	Dmel_CG7535	NP_732447.2	456	GluClalpha, isoform I
3R	NT_033777.3	19752618	19774708	+	42350	GluClalpha	Dmel_CG7535	NP_001287410.1	456	GluClalpha, isoform P
3R	NT_033777.3	19752618	19767646	+	42350	GluClalpha	Dmel_CG7535	NP_650827.3	456	GluClalpha, isoform M
3R	NT_033777.3	19752618	19774708	+	42350	GluClalpha	Dmel_CG7535	NP_001014641.2	448	GluClalpha, isoform L
3R	NT_033777.3	19752618	19767646	+	42350	GluClalpha	Dmel_CG7535	NP_001287409.1	455	GluClalpha, isoform O
3R	NT_033777.3	19752618	19774708	+	42350	GluClalpha	Dmel_CG7535	NP_001287408.1	463	GluClalpha, isoform N
3R	NT_033777.3	19752618	19774708	+	42350	GluClalpha	Dmel_CG7535	NP_001163656.2	447	GluClalpha, isoform K
3R	NT_033777.3	19752618	19767646	+	42350	GluClalpha	Dmel_CG7535	NP_001262740.1	457	GluClalpha, isoform J
3R	NT_033777.3	19753852	19764436	+	42350	GluClalpha	Dmel_CG7535	NP_001163654.1	263	GluClalpha, isoform E
3R	NT_033777.3	19771442	19773175	-	42351	CG6300	Dmel_CG6300	NP_650828.1	537	CG6300
3R	NT_033777.3	19775473	19777230	-	42352	CG11659	Dmel_CG11659	NP_650829.1	546	uncharacterized protein Dmel_CG11659
3R	NT_033777.3	19778766	19780572	+	42353	CG11391	Dmel_CG11391	NP_650830.1	542	uncharacterized protein Dmel_CG11391
3R	NT_033777.3	19781308	19783035	+	42354	CG11407	Dmel_CG11407	NP_650831.1	538	uncharacterized protein Dmel_CG11407
3R	NT_033777.3	19783618	19785404	+	42355	CG11453	Dmel_CG11453	NP_650832.1	539	uncharacterized protein Dmel_CG11453
3R	NT_033777.3	19794282	19828488	-	42356	bnl	Dmel_CG4608	NP_732452.1	770	branchless, isoform A
3R	NT_033777.3	19795491	19828488	-	42356	bnl	Dmel_CG4608	NP_001287411.1	760	branchless, isoform D
3R	NT_033777.3	19795491	19828488	-	42356	bnl	Dmel_CG4608	NP_001138083.1	760	branchless, isoform C
3R	NT_033777.3	19840996	19841918	+	318746	CG31459	Dmel_CG31459	NP_732454.1	246	uncharacterized protein Dmel_CG31459
3R	NT_033777.3	19847378	19853631	+	42357	CG4662	Dmel_CG4662	NP_732455.1	479	CG4662, isoform B
3R	NT_033777.3	19847378	19852778	+	42357	CG4662	Dmel_CG4662	NP_001262741.1	524	CG4662, isoform D
3R	NT_033777.3	19847378	19852778	+	42357	CG4662	Dmel_CG4662	NP_650833.1	497	CG4662, isoform A
3R	NT_033777.3	19847378	19853631	+	42357	CG4662	Dmel_CG4662	NP_001262743.1	505	CG4662, isoform F
3R	NT_033777.3	19847378	19852778	+	42357	CG4662	Dmel_CG4662	NP_001262742.1	494	CG4662, isoform E
3R	NT_033777.3	19847378	19853631	+	42357	CG4662	Dmel_CG4662	NP_001163657.1	476	CG4662, isoform C
3R	NT_033777.3	19854440	19861014	-	42358	Ire1	Dmel_CG4583	NP_001097839.1	1074	Inositol-requiring enzyme-1
3R	NT_033777.3	19861643	19862395	+	42359	CG11447	Dmel_CG11447	NP_650835.1	250	uncharacterized protein Dmel_CG11447
3R	NT_033777.3	19862722	19864170	-	42360	CG4572	Dmel_CG4572	NP_732457.1	482	CG4572, isoform D
3R	NT_033777.3	19862722	19864170	-	42360	CG4572	Dmel_CG4572	NP_650836.1	482	CG4572, isoform B
3R	NT_033777.3	19862722	19864170	-	42360	CG4572	Dmel_CG4572	NP_732456.1	482	CG4572, isoform A
3R	NT_033777.3	19864833	19866557	+	42361	CG4686	Dmel_CG4686	NP_650837.1	181	CG4686, isoform A
3R	NT_033777.3	19864833	19866557	+	42361	CG4686	Dmel_CG4686	NP_001262744.1	181	CG4686, isoform B
3R	NT_033777.3	19867332	19874421	-	42362	CG4562	Dmel_CG4562	NP_001262747.1	1408	CG4562, isoform E
3R	NT_033777.3	19867470	19874421	-	42362	CG4562	Dmel_CG4562	NP_650838.1	1362	CG4562, isoform A
3R	NT_033777.3	19867470	19874421	-	42362	CG4562	Dmel_CG4562	NP_001262745.1	1362	CG4562, isoform C
3R	NT_033777.3	19868744	19874421	-	42362	CG4562	Dmel_CG4562	NP_001097841.1	948	CG4562, isoform B
3R	NT_033777.3	19868744	19874421	-	42362	CG4562	Dmel_CG4562	NP_001262746.1	948	CG4562, isoform D
3R	NT_033777.3	19876213	19877417	-	42363	CG17186	Dmel_CG17186	NP_650839.1	381	uncharacterized protein Dmel_CG17186
3R	NT_033777.3	19877878	19879250	+	42364	Arc42	Dmel_CG4703	NP_650840.1	405	Arc42
3R	NT_033777.3	19879924	19885731	+	42366	Ask1	Dmel_CG4720	NP_477089.3	1363	apoptotic signal-regulating kinase 1, isoform C
3R	NT_033777.3	19881491	19885731	+	42366	Ask1	Dmel_CG4720	NP_996240.1	1196	apoptotic signal-regulating kinase 1, isoform B
3R	NT_033777.3	19886545	19888030	-	42367	ninaE	Dmel_CG4550	NP_524407.1	373	neither inactivation nor afterpotential E
3R	NT_033777.3	19892749	19898540	+	42368	CG4733	Dmel_CG4733	NP_001247197.1	888	CG4733, isoform C
3R	NT_033777.3	19892749	19898540	+	42368	CG4733	Dmel_CG4733	NP_001247198.1	888	CG4733, isoform D
3R	NT_033777.3	19892749	19898540	+	42368	CG4733	Dmel_CG4733	NP_650842.2	888	CG4733, isoform B
3R	NT_033777.3	19892749	19898540	+	42368	CG4733	Dmel_CG4733	NP_001287412.1	882	CG4733, isoform E
3R	NT_033777.3	19899292	19902898	-	42369	CG4538	Dmel_CG4538	NP_001287413.1	679	CG4538, isoform C
3R	NT_033777.3	19899596	19902898	-	42369	CG4538	Dmel_CG4538	NP_732463.2	673	CG4538, isoform D
3R	NT_033777.3	19899596	19902898	-	42369	CG4538	Dmel_CG4538	NP_650843.1	673	CG4538, isoform A
3R	NT_033777.3	19903760	19904788	-	42370	Surf6	Dmel_CG4510	NP_524408.1	324	surfeit 6
3R	NT_033777.3	19905311	19913084	+	42371	RhoGAP92B	Dmel_CG4755	NP_001287414.1	739	Rho GTPase activating protein at 92B, isoform B
3R	NT_033777.3	19905311	19913084	+	42371	RhoGAP92B	Dmel_CG4755	NP_650844.1	740	Rho GTPase activating protein at 92B, isoform A
3R	NT_033777.3	19905311	19913084	+	42371	RhoGAP92B	Dmel_CG4755	NP_001287417.1	740	Rho GTPase activating protein at 92B, isoform E
3R	NT_033777.3	19905857	19913084	+	42371	RhoGAP92B	Dmel_CG4755	NP_001287416.1	648	Rho GTPase activating protein at 92B, isoform D
3R	NT_033777.3	19911001	19913084	+	42371	RhoGAP92B	Dmel_CG4755	NP_001287415.1	543	Rho GTPase activating protein at 92B, isoform C
3R	NT_033777.3	19914483	19914824	-	42373	Xport-A	Dmel_CG4468	NP_001163658.1	113	exit protein of rhodopsin and TRP B, isoform A
3R	NT_033777.3	19914483	19914824	-	42373	Xport-A	Dmel_CG4468	NP_001262749.1	113	exit protein of rhodopsin and TRP B, isoform B
3R	NT_033777.3	19914876	19915294	-	42373	Xport-A	Dmel_CG4468	NP_650846.1	116	exit protein of rhodopsin and TRP A
3R	NT_033777.3	19915990	19917778	-	42374	CG4465	Dmel_CG4465	NP_650847.1	577	CG4465
3R	NT_033777.3	19918532	19920517	+	42375	CG4770	Dmel_CG4770	NP_650848.1	490	CG4770
3R	NT_033777.3	19921918	19923938	-	42376	CG4462	Dmel_CG4462	NP_650849.1	573	CG4462
3R	NT_033777.3	19926436	19928595	-	42377	CG4459	Dmel_CG4459	NP_650850.1	632	CG4459
3R	NT_033777.3	19930397	20006420	-	42380	Hs6st	Dmel_CG4451	NP_524409.2	462	heparan sulfate 6-O-sulfotransferase, isoform A
3R	NT_033777.3	19930397	20006420	-	42380	Hs6st	Dmel_CG4451	NP_001262750.1	462	heparan sulfate 6-O-sulfotransferase, isoform B
3R	NT_033777.3	19932184	19934673	-	42379	mira	Dmel_CG12249	NP_477292.1	799	miranda, isoform B
3R	NT_033777.3	19932184	19934673	-	42379	mira	Dmel_CG12249	NP_477291.1	829	miranda, isoform A
3R	NT_033777.3	19932184	19934673	-	42379	mira	Dmel_CG12249	NP_001262751.1	805	miranda, isoform C
3R	NT_033777.3	19948485	19948800	+	42381	CG4783	Dmel_CG4783	NP_001287418.1	83	CG4783, isoform B
3R	NT_033777.3	19948485	19948800	+	42381	CG4783	Dmel_CG4783	NP_650851.1	86	CG4783, isoform A
3R	NT_033777.3	19972931	19979012	+	42382	CG31213	Dmel_CG31213	NP_732473.2	1809	uncharacterized protein Dmel_CG31213, isoform C
3R	NT_033777.3	19972931	19979012	+	42382	CG31213	Dmel_CG31213	NP_001262752.1	1809	uncharacterized protein Dmel_CG31213, isoform B
3R	NT_033777.3	20009060	20011651	+	42385	MED25	Dmel_CG12254	NP_650854.1	863	mediator complex subunit 25
3R	NT_033777.3	20011880	20013450	-	42386	CG17190	Dmel_CG17190	NP_001247200.1	257	uncharacterized protein Dmel_CG17190
3R	NT_033777.3	20013983	20018086	+	42387	CG4836	Dmel_CG4836	NP_732476.2	1214	CG4836, isoform B
3R	NT_033777.3	20013983	20018086	+	42387	CG4836	Dmel_CG4836	NP_650856.2	1217	CG4836, isoform C
3R	NT_033777.3	20013983	20016830	+	42387	CG4836	Dmel_CG4836	NP_732477.2	836	CG4836, isoform A
3R	NT_033777.3	20014231	20018086	+	42387	CG4836	Dmel_CG4836	NP_001138085.1	1224	CG4836, isoform E
3R	NT_033777.3	20014231	20016830	+	42387	CG4836	Dmel_CG4836	NP_001138084.1	843	CG4836, isoform D
3R	NT_033777.3	20018986	20020882	-	42388	CG4433	Dmel_CG4433	NP_650857.3	365	CG4433, isoform D
3R	NT_033777.3	20018986	20020882	-	42388	CG4433	Dmel_CG4433	NP_001247201.1	365	CG4433, isoform C
3R	NT_033777.3	20018986	20020882	-	42388	CG4433	Dmel_CG4433	NP_996241.1	365	CG4433, isoform B
3R	NT_033777.3	20022054	20026170	+	42389	psidin	Dmel_CG4845	NP_650858.1	948	phagocyte signaling impaired
3R	NT_033777.3	20026627	20027960	-	42390	CG4424	Dmel_CG4424	NP_650859.3	345	CG4424
3R	NT_033777.3	20028155	20029398	+	42391	CG4854	Dmel_CG4854	NP_650860.1	319	CG4854
3R	NT_033777.3	20029666	20031210	-	42392	trem	Dmel_CG4413	NP_650861.1	439	trade embargo
3R	NT_033777.3	20031940	20034189	+	42393	CG4936	Dmel_CG4936	NP_650862.1	521	CG4936
3R	NT_033777.3	20034296	20035918	-	42394	CG10889	Dmel_CG10889	NP_650863.3	540	uncharacterized protein Dmel_CG10889
3R	NT_033777.3	20039590	20049709	-	50044	CG17193	Dmel_CG17193	NP_001287419.1	68	uncharacterized protein Dmel_CG17193, isoform C
3R	NT_033777.3	20039590	20049709	-	50044	CG17193	Dmel_CG17193	NP_652224.1	68	uncharacterized protein Dmel_CG17193, isoform A
3R	NT_033777.3	20039590	20049709	-	50044	CG17193	Dmel_CG17193	NP_001163659.1	68	uncharacterized protein Dmel_CG17193, isoform B
3R	NT_033777.3	20042854	20045568	+	3772159	CG33934	Dmel_CG33934	NP_001027202.1	562	I\'m not dead yet 2, isoform A
3R	NT_033777.3	20042854	20045568	+	3772159	CG33934	Dmel_CG33934	NP_001027201.1	562	I\'m not dead yet 2, isoform B
3R	NT_033777.3	20045884	20048310	+	3772159	CG33934	Dmel_CG33934	NP_001027200.2	555	uncharacterized protein Dmel_CG33934, isoform C
3R	NT_033777.3	20045884	20048310	+	3772159	CG33934	Dmel_CG33934	NP_001027199.2	555	uncharacterized protein Dmel_CG33934, isoform D
3R	NT_033777.3	20045884	20048310	+	3772159	CG33934	Dmel_CG33934	NP_001163660.1	556	uncharacterized protein Dmel_CG33934, isoform E
3R	NT_033777.3	20056511	20057371	-	42396	CG4390	Dmel_CG4390	NP_650864.1	286	CG4390, isoform A
3R	NT_033777.3	20056511	20059695	-	42396	CG4390	Dmel_CG4390	NP_732486.2	330	CG4390, isoform B
3R	NT_033777.3	20057854	20059052	+	42397	mdlc	Dmel_CG4973	NP_650865.1	357	midlife crisis
3R	NT_033777.3	20081275	20082426	-	42398	Rh3	Dmel_CG10888	NP_524411.1	383	rhodopsin 3
3R	NT_033777.3	20107115	20107883	-	318627	CG31206	Dmel_CG31206	NP_001262753.1	198	uncharacterized protein Dmel_CG31206, isoform B
3R	NT_033777.3	20107115	20107883	-	318627	CG31206	Dmel_CG31206	NP_732487.1	190	uncharacterized protein Dmel_CG31206, isoform A
3R	NT_033777.3	20114939	20117083	+	42399	CG10887	Dmel_CG10887	NP_650866.1	676	uncharacterized protein Dmel_CG10887
3R	NT_033777.3	20121060	20122277	+	117473	Gr92a	Dmel_CG31208	NP_732489.2	386	gustatory receptor 92a
3R	NT_033777.3	20169515	20174673	+	42400	CG5023	Dmel_CG5023	NP_650867.1	169	CG5023
3R	NT_033777.3	20208336	20209721	-	42401	CG17199	Dmel_CG17199	NP_650868.1	461	uncharacterized protein Dmel_CG17199
3R	NT_033777.3	20211255	20238336	+	42402	Nlg4	Dmel_CG34139	NP_001163661.1	1280	neuroligin 4, isoform B
3R	NT_033777.3	20211255	20238336	+	42402	Nlg4	Dmel_CG34139	NP_001036730.2	1280	neuroligin 4, isoform C
3R	NT_033777.3	20211255	20238336	+	42402	Nlg4	Dmel_CG34139	NP_001287420.1	1280	neuroligin 4, isoform E
3R	NT_033777.3	20211255	20238336	+	42402	Nlg4	Dmel_CG34139	NP_001163662.1	1281	neuroligin 4, isoform D
3R	NT_033777.3	20288081	20300627	+	53560	cic	Dmel_CG43122	NP_001262755.1	2150	capicua, isoform G
3R	NT_033777.3	20288081	20300627	+	53560	cic	Dmel_CG43122	NP_001247203.1	2141	capicua, isoform D
3R	NT_033777.3	20293449	20300627	+	53560	cic	Dmel_CG43122	NP_001097843.1	1832	capicua, isoform B
3R	NT_033777.3	20293449	20300714	+	53560	cic	Dmel_CG43122	NP_001247202.1	1427	capicua, isoform C
3R	NT_033777.3	20293449	20300627	+	53560	cic	Dmel_CG43122	NP_524992.1	1403	capicua, isoform A
3R	NT_033777.3	20294003	20300714	+	53560	cic	Dmel_CG43122	NP_001247204.2	1275	capicua, isoform H
3R	NT_033777.3	20304202	20304922	-	42409	CG4367	Dmel_CG4367	NP_001287421.1	219	CG4367, isoform B
3R	NT_033777.3	20304202	20304922	-	42409	CG4367	Dmel_CG4367	NP_650875.2	219	CG4367, isoform A
3R	NT_033777.3	20306313	20307507	-	42410	CG4362	Dmel_CG4362	NP_650876.1	233	CG4362
3R	NT_033777.3	20310203	20323449	+	42412	CG42668	Dmel_CG42668	NP_001189251.1	956	uncharacterized protein Dmel_CG42668, isoform K
3R	NT_033777.3	20310203	20323449	+	42412	CG42668	Dmel_CG42668	NP_001189252.1	956	uncharacterized protein Dmel_CG42668, isoform L
3R	NT_033777.3	20310203	20323449	+	42412	CG42668	Dmel_CG42668	NP_001189250.2	990	uncharacterized protein Dmel_CG42668, isoform M
3R	NT_033777.3	20318270	20323449	+	42412	CG42668	Dmel_CG42668	NP_732499.4	798	uncharacterized protein Dmel_CG42668, isoform F
3R	NT_033777.3	20318270	20323449	+	42412	CG42668	Dmel_CG42668	NP_001138086.1	957	uncharacterized protein Dmel_CG42668, isoform E
3R	NT_033777.3	20318270	20323449	+	42412	CG42668	Dmel_CG42668	NP_650878.4	816	uncharacterized protein Dmel_CG42668, isoform H
3R	NT_033777.3	20318958	20323449	+	42412	CG42668	Dmel_CG42668	NP_001189249.2	817	uncharacterized protein Dmel_CG42668, isoform N
3R	NT_033777.3	20318958	20323449	+	42412	CG42668	Dmel_CG42668	NP_732500.5	958	uncharacterized protein Dmel_CG42668, isoform G
3R	NT_033777.3	20321305	20323449	+	42412	CG42668	Dmel_CG42668	NP_732501.1	625	uncharacterized protein Dmel_CG42668, isoform D
3R	NT_033777.3	20325629	20327536	-	42413	CG4360	Dmel_CG4360	NP_650879.1	556	CG4360, isoform A
3R	NT_033777.3	20326218	20327536	-	42413	CG4360	Dmel_CG4360	NP_001097844.1	385	CG4360, isoform B
3R	NT_033777.3	20328737	20329915	+	42414	Sirt2	Dmel_CG5085	NP_650880.2	355	sirtuin 2, isoform A
3R	NT_033777.3	20328737	20329915	+	42414	Sirt2	Dmel_CG5085	NP_001287422.1	355	sirtuin 2, isoform B
3R	NT_033777.3	20338973	20343902	+	42415	Ir92a	Dmel_CG15685	NP_001097845.2	678	ionotropic receptor 92a
3R	NT_033777.3	20360346	20360536	+	42416	MtnC	Dmel_CG5097	NP_650882.1	43	metallothionein C
3R	NT_033777.3	20381299	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001262756.1	1217	glial cell line-derived neurotrophic family receptor-like, isoform L
3R	NT_033777.3	20381314	20437924	-	3346162	Gfrl	Dmel_CG43224	NP_001247209.1	1168	glial cell line-derived neurotrophic family receptor-like, isoform I
3R	NT_033777.3	20381314	20437924	-	3346162	Gfrl	Dmel_CG43224	NP_001287423.1	1042	glial cell line-derived neurotrophic family receptor-like, isoform M
3R	NT_033777.3	20381314	20437924	-	3346162	Gfrl	Dmel_CG43224	NP_001247206.1	1279	glial cell line-derived neurotrophic family receptor-like, isoform E
3R	NT_033777.3	20381314	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001014642.4	1101	glial cell line-derived neurotrophic family receptor-like, isoform H
3R	NT_033777.3	20381314	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001287424.1	1212	glial cell line-derived neurotrophic family receptor-like, isoform N
3R	NT_033777.3	20381314	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001247208.1	1212	glial cell line-derived neurotrophic family receptor-like, isoform G
3R	NT_033777.3	20381314	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001247207.1	864	glial cell line-derived neurotrophic family receptor-like, isoform F
3R	NT_033777.3	20381314	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001247210.1	1212	glial cell line-derived neurotrophic family receptor-like, isoform J
3R	NT_033777.3	20401147	20465049	-	3346162	Gfrl	Dmel_CG43224	NP_001036732.1	214	glial cell line-derived neurotrophic family receptor-like, isoform K
3R	NT_033777.3	20406670	20407823	-	42421	CG4335	Dmel_CG4335	NP_650886.1	364	CG4335
3R	NT_033777.3	20408327	20409148	+	42422	eIF3gb	Dmel_CG10881	NP_650887.1	273	eIF3g paralogue b
3R	NT_033777.3	20500081	20501312	-	42423	Dic2	Dmel_CG4323	NP_732513.1	304	dicarboxylate carrier 2, isoform C
3R	NT_033777.3	20500081	20501312	-	42423	Dic2	Dmel_CG4323	NP_732512.1	304	dicarboxylate carrier 2, isoform A
3R	NT_033777.3	20503338	20503530	-	42424	MtnB	Dmel_CG4312	NP_001287426.1	43	metallothionein B, isoform C
3R	NT_033777.3	20503338	20503530	-	42424	MtnB	Dmel_CG4312	NP_001287425.1	43	metallothionein B, isoform B
3R	NT_033777.3	20503338	20503530	-	42424	MtnB	Dmel_CG4312	NP_524413.1	43	metallothionein B, isoform A
3R	NT_033777.3	20504795	20506186	+	42425	Or92a	Dmel_CG17916	NP_524414.2	408	odorant receptor 92a
3R	NT_033777.3	20507574	20510070	-	42426	MFS9	Dmel_CG4288	NP_732515.1	502	major facilitator superfamily transporter 9, isoform A
3R	NT_033777.3	20507574	20510070	-	42426	MFS9	Dmel_CG4288	NP_650889.1	502	major facilitator superfamily transporter 9, isoform B
3R	NT_033777.3	20534429	20534634	-	10178932	MtnE	Dmel_CG42872	NP_001287427.1	41	metallothionein E, isoform B
3R	NT_033777.3	20534429	20534634	-	10178932	MtnE	Dmel_CG42872	NP_001189254.1	41	metallothionein E, isoform A
3R	NT_033777.3	20535017	20535217	+	326270	MtnD	Dmel_CG33192	NP_788695.2	44	metallothionein D
3R	NT_033777.3	20537409	20541300	-	42428	Stat92E	Dmel_CG4257	NP_732517.2	628	Signal-transducer and activator of transcription protein at 92E, isoform B
3R	NT_033777.3	20537409	20541300	-	42428	Stat92E	Dmel_CG4257	NP_001014643.1	635	Signal-transducer and activator of transcription protein at 92E, isoform G
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_001262759.1	811	Signal-transducer and activator of transcription protein at 92E, isoform J
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_732516.2	754	Signal-transducer and activator of transcription protein at 92E, isoform C
3R	NT_033777.3	20537409	20541300	-	42428	Stat92E	Dmel_CG4257	NP_001262757.1	635	Signal-transducer and activator of transcription protein at 92E, isoform H
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_001262762.1	761	Signal-transducer and activator of transcription protein at 92E, isoform M
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_996242.1	754	Signal-transducer and activator of transcription protein at 92E, isoform E
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_001262760.1	818	Signal-transducer and activator of transcription protein at 92E, isoform K
3R	NT_033777.3	20537409	20541804	-	42428	Stat92E	Dmel_CG4257	NP_996243.1	761	Signal-transducer and activator of transcription protein at 92E, isoform F
3R	NT_033777.3	20538529	20541300	-	42428	Stat92E	Dmel_CG4257	NP_001262758.1	679	Signal-transducer and activator of transcription protein at 92E, isoform I
3R	NT_033777.3	20538529	20541300	-	42428	Stat92E	Dmel_CG4257	NP_001262761.1	679	Signal-transducer and activator of transcription protein at 92E, isoform L
3R	NT_033777.3	20552909	20554167	-	2768673	att-ORFB	Dmel_CG33488	NP_732519.3	290	alternative testis transcripts open reading frame A, isoform B
3R	NT_033777.3	20552909	20554898	-	42429	att-ORFA	Dmel_CG4241	NP_996244.1	365	alternative testis transcripts open reading frame A, isoform C
3R	NT_033777.3	20552909	20554898	-	42429	att-ORFA	Dmel_CG4241	NP_001287430.1	365	alternative testis transcripts open reading frame A, isoform F
3R	NT_033777.3	20552909	20554898	-	42429	att-ORFA	Dmel_CG4241	NP_001287428.1	364	alternative testis transcripts open reading frame A, isoform D
3R	NT_033777.3	20552909	20554898	-	42429	att-ORFA	Dmel_CG4241	NP_650891.1	365	alternative testis transcripts open reading frame A, isoform A
3R	NT_033777.3	20552909	20554167	-	2768673	att-ORFB	Dmel_CG33488	NP_001287429.1	290	alternative testis transcripts open reading frame A, isoform E
3R	NT_033777.3	20553584	20554290	-	2768673	att-ORFB	Dmel_CG33488	NP_996245.1	197	alternative testis transcripts open reading frame B
3R	NT_033777.3	20558398	20559587	+	192508	CG5180	Dmel_CG5180	NP_001138087.1	355	CG5180, isoform B
3R	NT_033777.3	20558398	20559587	+	192508	CG5180	Dmel_CG5180	NP_650892.2	355	CG5180, isoform C
3R	NT_033777.3	20559783	20560047	-	50048	CG15922	Dmel_CG15922	NP_001262763.1	67	uncharacterized protein Dmel_CG15922, isoform B
3R	NT_033777.3	20559783	20560047	-	50048	CG15922	Dmel_CG15922	NP_652228.1	67	uncharacterized protein Dmel_CG15922, isoform A
3R	NT_033777.3	20561299	20572463	+	42431	CG5191	Dmel_CG5191	NP_650893.2	552	CG5191, isoform B
3R	NT_033777.3	20562644	20563969	-	42432	CG10877	Dmel_CG10877	NP_650894.1	441	uncharacterized protein Dmel_CG10877
3R	NT_033777.3	20566445	20572463	+	42431	CG5191	Dmel_CG5191	NP_732523.1	528	CG5191, isoform C
3R	NT_033777.3	20566445	20572463	+	42431	CG5191	Dmel_CG5191	NP_732524.1	528	CG5191, isoform E
3R	NT_033777.3	20566445	20572463	+	42431	CG5191	Dmel_CG5191	NP_001287431.1	528	CG5191, isoform F
3R	NT_033777.3	20571174	20572463	+	42431	CG5191	Dmel_CG5191	NP_732526.1	429	CG5191, isoform D
3R	NT_033777.3	20571174	20572463	+	42431	CG5191	Dmel_CG5191	NP_732525.1	429	CG5191, isoform A
3R	NT_033777.3	20575495	20576873	-	42433	TFAM	Dmel_CG4217	NP_524415.1	257	mitochondrial transcription factor A, isoform A
3R	NT_033777.3	20575495	20576873	-	42433	TFAM	Dmel_CG4217	NP_732527.1	284	mitochondrial transcription factor A, isoform B
3R	NT_033777.3	20577139	20578037	+	42434	CG5412	Dmel_CG5412	NP_650895.1	279	CG5412
3R	NT_033777.3	20578678	20579456	-	42435	EloB	Dmel_CG4204	NP_524416.1	118	elongin B
3R	NT_033777.3	20580169	20580684	+	42436	Srp14	Dmel_CG5417	NP_650896.2	109	signal recognition particle protein 14
3R	NT_033777.3	20580737	20581500	-	3885577	CG34008	Dmel_CG34008	NP_001034062.1	212	uncharacterized protein Dmel_CG34008
3R	NT_033777.3	20582500	20585472	-	42437	CG16953	Dmel_CG16953	NP_650897.3	573	uncharacterized protein Dmel_CG16953
3R	NT_033777.3	20586346	20588271	-	42438	Sep2	Dmel_CG4173	NP_524417.1	419	septin 2, isoform A
3R	NT_033777.3	20586346	20587428	-	42438	Sep2	Dmel_CG4173	NP_001262764.1	360	septin 2, isoform B
3R	NT_033777.3	20588825	20590958	+	42439	Srp72	Dmel_CG5434	NP_650898.1	650	signal recognition particle protein 72
3R	NT_033777.3	20591086	20592596	-	42440	CG4159	Dmel_CG4159	NP_001163664.1	442	CG4159, isoform B
3R	NT_033777.3	20591086	20592437	-	42440	CG4159	Dmel_CG4159	NP_650899.1	410	CG4159, isoform A
3R	NT_033777.3	20593844	20611058	+	44235	bon	Dmel_CG5206	NP_001262765.1	1207	bonus, isoform C
3R	NT_033777.3	20593844	20610836	+	44235	bon	Dmel_CG5206	NP_001163665.1	1125	bonus, isoform B
3R	NT_033777.3	20593844	20610836	+	44235	bon	Dmel_CG5206	NP_001262766.1	1119	bonus, isoform D
3R	NT_033777.3	20593844	20610836	+	44235	bon	Dmel_CG5206	NP_524724.2	1133	bonus, isoform A
3R	NT_033777.3	20593844	20610836	+	44235	bon	Dmel_CG5206	NP_001262768.1	1122	bonus, isoform F
3R	NT_033777.3	20593844	20610836	+	44235	bon	Dmel_CG5206	NP_001262767.1	1125	bonus, isoform E
3R	NT_033777.3	20612558	20616844	-	42443	CG15923	Dmel_CG15923	NP_001262769.1	984	uncharacterized protein Dmel_CG15923, isoform C
3R	NT_033777.3	20612609	20616844	-	42443	CG15923	Dmel_CG15923	NP_001097846.1	967	uncharacterized protein Dmel_CG15923, isoform B
3R	NT_033777.3	20618091	20620355	+	42444	CG5466	Dmel_CG5466	NP_650901.2	594	CG5466
3R	NT_033777.3	20622496	20626788	+	42445	H	Dmel_CG5460	NP_732534.1	1077	hairless, isoform D
3R	NT_033777.3	20622496	20626788	+	42445	H	Dmel_CG5460	NP_732533.1	1077	hairless, isoform A
3R	NT_033777.3	20622635	20626788	+	42445	H	Dmel_CG5460	NP_524418.2	1059	hairless, isoform C
3R	NT_033777.3	20622635	20626788	+	42445	H	Dmel_CG5460	NP_732535.1	1059	hairless, isoform B
3R	NT_033777.3	20629747	20633522	-	42446	Pi3K92E	Dmel_CG4141	NP_001262770.1	1088	Pi3K92E, isoform C
3R	NT_033777.3	20629747	20633522	-	42446	Pi3K92E	Dmel_CG4141	NP_650902.1	1088	Pi3K92E, isoform A
3R	NT_033777.3	20629747	20633522	-	42446	Pi3K92E	Dmel_CG4141	NP_732536.1	1088	Pi3K92E, isoform B
3R	NT_033777.3	20635638	20644134	+	42447	Lrrk	Dmel_CG5483	NP_001262772.1	2513	Leucine-rich repeat kinase, isoform D
3R	NT_033777.3	20635638	20644134	+	42447	Lrrk	Dmel_CG5483	NP_001262771.1	2422	Leucine-rich repeat kinase, isoform C
3R	NT_033777.3	20636188	20644134	+	42447	Lrrk	Dmel_CG5483	NP_001097847.1	2445	Leucine-rich repeat kinase, isoform B
3R	NT_033777.3	20644787	20648599	-	318623	GluRIIE	Dmel_CG31201	NP_001036733.1	897	glutamate receptor IIE
3R	NT_033777.3	20648804	20652288	-	44483	GluRIID	Dmel_CG18039	NP_651982.1	902	glutamate receptor IID
3R	NT_033777.3	20653239	20659518	-	42449	Nep4	Dmel_CG4058	NP_732540.2	978	neprilysin 4, isoform B
3R	NT_033777.3	20653239	20659518	-	42449	Nep4	Dmel_CG4058	NP_001262773.1	978	neprilysin 4, isoform C
3R	NT_033777.3	20653239	20656639	-	42449	Nep4	Dmel_CG4058	NP_650904.3	1040	neprilysin 4, isoform A
3R	NT_033777.3	20669731	20672269	+	42450	Cpr92F	Dmel_CG5494	NP_650905.2	381	cuticular protein 92F
3R	NT_033777.3	20676362	20677282	-	42451	CG4000	Dmel_CG4000	NP_650906.1	263	CG4000
3R	NT_033777.3	20689864	20700845	-	43982	Oamb	Dmel_CG3856	NP_001262774.1	751	octopamine receptor in mushroom bodies, isoform D
3R	NT_033777.3	20689975	20700845	-	43982	Oamb	Dmel_CG3856	NP_001303429.1	714	octopamine receptor in mushroom bodies, isoform G
3R	NT_033777.3	20690182	20700845	-	43982	Oamb	Dmel_CG3856	NP_732542.1	645	octopamine receptor in mushroom bodies, isoform C
3R	NT_033777.3	20690182	20700845	-	43982	Oamb	Dmel_CG3856	NP_732541.1	645	octopamine receptor in mushroom bodies, isoform F
3R	NT_033777.3	20692812	20700845	-	43982	Oamb	Dmel_CG3856	NP_001262775.1	682	octopamine receptor in mushroom bodies, isoform E
3R	NT_033777.3	20692947	20700845	-	43982	Oamb	Dmel_CG3856	NP_524669.2	637	octopamine receptor in mushroom bodies, isoform B
3R	NT_033777.3	20731661	20732542	+	318626	CG31205	Dmel_CG31205	NP_001287432.1	274	uncharacterized protein Dmel_CG31205, isoform C
3R	NT_033777.3	20731661	20732542	+	318626	CG31205	Dmel_CG31205	NP_732543.2	274	uncharacterized protein Dmel_CG31205, isoform B
3R	NT_033777.3	20735697	20737134	+	42453	Cdk2	Dmel_CG10498	NP_732544.1	314	Cyclin-dependent kinase 2, isoform A
3R	NT_033777.3	20735697	20737134	+	42453	Cdk2	Dmel_CG10498	NP_524420.1	314	Cyclin-dependent kinase 2, isoform B
3R	NT_033777.3	20735697	20737134	+	42453	Cdk2	Dmel_CG10498	NP_001163666.1	314	Cyclin-dependent kinase 2, isoform C
3R	NT_033777.3	20737366	20738722	-	42454	CG17267	Dmel_CG17267	NP_650907.2	363	uncharacterized protein Dmel_CG17267
3R	NT_033777.3	20742827	20743765	-	42456	CG31199	Dmel_CG31199	NP_732546.1	293	uncharacterized protein Dmel_CG31199
3R	NT_033777.3	20744279	20745323	-	326124	CG31200	Dmel_CG31200	NP_650909.1	284	uncharacterized protein Dmel_CG31200
3R	NT_033777.3	20746821	20753605	+	42455	CG42322	Dmel_CG42322	NP_732550.1	578	uncharacterized protein Dmel_CG42322, isoform D
3R	NT_033777.3	20746821	20753605	+	42455	CG42322	Dmel_CG42322	NP_001138091.2	578	uncharacterized protein Dmel_CG42322, isoform M
3R	NT_033777.3	20746821	20755490	+	42455	CG42322	Dmel_CG42322	NP_001138090.1	733	uncharacterized protein Dmel_CG42322, isoform J
3R	NT_033777.3	20746821	20753605	+	42455	CG42322	Dmel_CG42322	NP_001247211.1	578	uncharacterized protein Dmel_CG42322, isoform L
3R	NT_033777.3	20746821	20755490	+	42455	CG42322	Dmel_CG42322	NP_001138089.1	733	uncharacterized protein Dmel_CG42322, isoform I
3R	NT_033777.3	20746821	20755490	+	42455	CG42322	Dmel_CG42322	NP_732549.2	743	uncharacterized protein Dmel_CG42322, isoform N
3R	NT_033777.3	20748269	20749018	-	42457	Prosalpha4T1	Dmel_CG17268	NP_650910.1	249	proteasome alpha4 subunit, Testis-specific 1
3R	NT_033777.3	20757237	20804712	+	42460	Syp	Dmel_CG17838	NP_001262779.1	699	syncrip, isoform M
3R	NT_033777.3	20757237	20806122	+	42460	Syp	Dmel_CG17838	NP_001097849.1	534	syncrip, isoform H
3R	NT_033777.3	20757237	20804708	+	42460	Syp	Dmel_CG17838	NP_001262776.1	603	syncrip, isoform I
3R	NT_033777.3	20757237	20806122	+	42460	Syp	Dmel_CG17838	NP_001262778.1	753	syncrip, isoform K
3R	NT_033777.3	20757237	20806122	+	42460	Syp	Dmel_CG17838	NP_732557.2	563	syncrip, isoform A
3R	NT_033777.3	20758624	20762147	-	46155	CG31195	Dmel_CG31195	NP_732553.2	807	uncharacterized protein Dmel_CG31195
3R	NT_033777.3	20770936	20772568	-	318725	Takl1	Dmel_CG31421	NP_732554.1	393	Tak1-like 1
3R	NT_033777.3	20790209	20806122	+	42460	Syp	Dmel_CG17838	NP_001262783.1	761	syncrip, isoform Q
3R	NT_033777.3	20790209	20806122	+	42460	Syp	Dmel_CG17838	NP_001262777.1	761	syncrip, isoform J
3R	NT_033777.3	20790209	20804708	+	42460	Syp	Dmel_CG17838	NP_001262781.1	611	syncrip, isoform O
3R	NT_033777.3	20790209	20806122	+	42460	Syp	Dmel_CG17838	NP_732555.1	571	syncrip, isoform E
3R	NT_033777.3	20790209	20804712	+	42460	Syp	Dmel_CG17838	NP_732556.1	707	syncrip, isoform D
3R	NT_033777.3	20791747	20804708	+	42460	Syp	Dmel_CG17838	NP_001262784.1	569	syncrip, isoform R
3R	NT_033777.3	20791747	20806122	+	42460	Syp	Dmel_CG17838	NP_732559.1	529	syncrip, isoform F
3R	NT_033777.3	20791747	20804712	+	42460	Syp	Dmel_CG17838	NP_001262780.1	665	syncrip, isoform N
3R	NT_033777.3	20791747	20806122	+	42460	Syp	Dmel_CG17838	NP_650913.2	711	syncrip, isoform B
3R	NT_033777.3	20791747	20806122	+	42460	Syp	Dmel_CG17838	NP_732558.2	529	syncrip, isoform C
3R	NT_033777.3	20791747	20804712	+	42460	Syp	Dmel_CG17838	NP_001262782.1	665	syncrip, isoform P
3R	NT_033777.3	20791747	20806122	+	42460	Syp	Dmel_CG17838	NP_001097848.2	711	syncrip, isoform L
3R	NT_033777.3	20810857	20816093	-	2768674	Fancd2	Dmel_CG17269	NP_996246.1	1478	Fancd2
3R	NT_033777.3	20817078	20818710	-	42462	CG17270	Dmel_CG17270	NP_001262785.1	169	uncharacterized protein Dmel_CG17270, isoform B
3R	NT_033777.3	20817078	20818710	-	42462	CG17270	Dmel_CG17270	NP_650915.1	169	uncharacterized protein Dmel_CG17270, isoform A
3R	NT_033777.3	20819277	20821711	-	42463	CG17271	Dmel_CG17271	NP_001036734.1	270	uncharacterized protein Dmel_CG17271, isoform B
3R	NT_033777.3	20820193	20821711	-	42463	CG17271	Dmel_CG17271	NP_650916.1	281	uncharacterized protein Dmel_CG17271, isoform A
3R	NT_033777.3	20822271	20823245	+	42464	RpS20	Dmel_CG15693	NP_524421.1	120	ribosomal protein S20
3R	NT_033777.3	20823389	20824095	-	42465	CG17272	Dmel_CG17272	NP_650917.1	149	uncharacterized protein Dmel_CG17272
3R	NT_033777.3	20825140	20830446	-	42466	AdSS	Dmel_CG17273	NP_650918.1	447	adenylosuccinate synthetase
3R	NT_033777.3	20831445	20832431	+	326127	CG31223	Dmel_CG31223	NP_732563.1	328	uncharacterized protein Dmel_CG31223
3R	NT_033777.3	20835228	20839397	+	42467	Synd	Dmel_CG33094	NP_788697.1	494	syndapin, isoform B
3R	NT_033777.3	20835228	20839397	+	42467	Synd	Dmel_CG33094	NP_001262787.1	495	syndapin, isoform D
3R	NT_033777.3	20835228	20839397	+	42467	Synd	Dmel_CG33094	NP_001262786.1	495	syndapin, isoform C
3R	NT_033777.3	20842333	20844629	+	42468	CG15695	Dmel_CG15695	NP_650920.3	725	uncharacterized protein Dmel_CG15695
3R	NT_033777.3	20847111	20847650	+	42469	CG15696	Dmel_CG15696	NP_650921.1	179	uncharacterized protein Dmel_CG15696
3R	NT_033777.3	20850866	20851351	+	42470	RpS30	Dmel_CG15697	NP_732566.1	132	ribosomal protein S30, isoform B
3R	NT_033777.3	20850866	20851351	+	42470	RpS30	Dmel_CG15697	NP_650922.1	132	ribosomal protein S30, isoform A
3R	NT_033777.3	20850866	20851351	+	42470	RpS30	Dmel_CG15697	NP_001287433.1	132	ribosomal protein S30, isoform C
3R	NT_033777.3	20851844	20859945	-	42471	Ir93a	Dmel_CG42315	NP_650924.3	868	ionotropic receptor 93a
3R	NT_033777.3	20861013	20866012	-	42473	CG3822	Dmel_CG3822	NP_650925.1	853	CG3822
3R	NT_033777.3	20871077	20871552	+	44121	TotA	Dmel_CG31509	NP_536778.2	129	turandot A
3R	NT_033777.3	20873032	20873484	+	117462	TotC	Dmel_CG31508	NP_536779.2	129	turandot C
3R	NT_033777.3	20873978	20874453	+	42474	TotB	Dmel_CG5609	NP_524422.1	138	turandot B
3R	NT_033777.3	20877766	20878264	+	117459	TotZ	Dmel_CG31507	NP_536782.2	147	turandot Z
3R	NT_033777.3	20896450	20897136	-	42475	Ktl	Dmel_CG10830	NP_001303467.1	228	Kctd12-like, isoform B
3R	NT_033777.3	20896450	20897136	-	42475	Ktl	Dmel_CG10830	NP_650926.1	228	Kctd12-like, isoform A
3R	NT_033777.3	20902116	20908136	+	42476	CG5621	Dmel_CG5621	NP_001036735.2	906	CG5621, isoform D
3R	NT_033777.3	20902116	20908136	+	42476	CG5621	Dmel_CG5621	NP_001262788.1	907	CG5621, isoform C
3R	NT_033777.3	20902116	20907252	+	42476	CG5621	Dmel_CG5621	NP_650927.1	822	CG5621, isoform A
3R	NT_033777.3	20905060	20905488	-	117460	TotX	Dmel_CG31193	NP_536781.2	142	turandot X
3R	NT_033777.3	20911781	20945170	-	42477	CG31191	Dmel_CG31191	NP_001097850.3	495	uncharacterized protein Dmel_CG31191, isoform D
3R	NT_033777.3	20911781	20930232	-	42477	CG31191	Dmel_CG31191	NP_732570.1	255	uncharacterized protein Dmel_CG31191, isoform A
3R	NT_033777.3	20925944	20927507	+	42478	hdly	Dmel_CG5630	NP_650929.1	377	hadley, isoform A
3R	NT_033777.3	20925944	20929001	+	42478	hdly	Dmel_CG5630	NP_001097851.1	445	hadley, isoform B
3R	NT_033777.3	20925944	20927507	+	42478	hdly	Dmel_CG5630	NP_001262789.1	377	hadley, isoform C
3R	NT_033777.3	20948806	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_732572.1	1041	Na pump alpha subunit, isoform A
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_996247.1	1002	Na pump alpha subunit, isoform H
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_001262790.1	1002	Na pump alpha subunit, isoform J
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_996250.1	1002	Na pump alpha subunit, isoform E
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_996249.1	1002	Na pump alpha subunit, isoform F
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_732573.1	1002	Na pump alpha subunit, isoform B
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_732574.1	1002	Na pump alpha subunit, isoform C
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_001163667.1	1002	Na pump alpha subunit, isoform I
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_996248.1	1002	Na pump alpha subunit, isoform G
3R	NT_033777.3	20963737	20966748	+	48971	Atpalpha	Dmel_CG5670	NP_732575.1	839	Na pump alpha subunit, isoform D
3R	NT_033777.3	20963737	20973931	+	48971	Atpalpha	Dmel_CG5670	NP_001262791.1	1002	Na pump alpha subunit, isoform K
3R	NT_033777.3	20986760	20987629	-	12798498	CG43446	Dmel_CG43446	NP_001247216.1	266	uncharacterized protein Dmel_CG43446, isoform A
3R	NT_033777.3	20986760	20987629	-	12798498	CG43446	Dmel_CG43446	NP_001247217.1	267	uncharacterized protein Dmel_CG43446, isoform B
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_001247212.1	950	Na/Ca-exchange protein, isoform D
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_001247215.1	973	Na/Ca-exchange protein, isoform G
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_732576.1	950	Na/Ca-exchange protein, isoform B
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_524423.2	950	Na/Ca-exchange protein, isoform A
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_001287434.1	955	Na/Ca-exchange protein, isoform H
3R	NT_033777.3	20992568	21008747	+	42481	Calx	Dmel_CG5685	NP_001287435.1	657	Na/Ca-exchange protein, isoform I
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_001247214.1	960	Na/Ca-exchange protein, isoform F
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_001247213.1	963	Na/Ca-exchange protein, isoform E
3R	NT_033777.3	20992568	21013095	+	42481	Calx	Dmel_CG5685	NP_732577.1	950	Na/Ca-exchange protein, isoform C
3R	NT_033777.3	21005249	21006974	-	42482	CG10827	Dmel_CG10827	NP_650931.1	522	uncharacterized protein Dmel_CG10827
3R	NT_033777.3	21016285	21016759	+	42483	CG5697	Dmel_CG5697	NP_001247220.1	133	CG5697, isoform D
3R	NT_033777.3	21016285	21016759	+	42483	CG5697	Dmel_CG5697	NP_001247218.1	133	CG5697, isoform B
3R	NT_033777.3	21016285	21016759	+	42483	CG5697	Dmel_CG5697	NP_001247219.1	133	CG5697, isoform C
3R	NT_033777.3	21016285	21016759	+	42483	CG5697	Dmel_CG5697	NP_650932.1	133	CG5697, isoform A
3R	NT_033777.3	21017778	21020207	+	42484	Rlip	Dmel_CG11622	NP_650933.2	625	Ral interacting protein, isoform A
3R	NT_033777.3	21017778	21020207	+	42484	Rlip	Dmel_CG11622	NP_001262792.1	624	Ral interacting protein, isoform B
3R	NT_033777.3	21021270	21022698	-	50050	CG17278	Dmel_CG17278	NP_652230.1	80	uncharacterized protein Dmel_CG17278
3R	NT_033777.3	21025019	21042419	-	42485	Dhc93AB	Dmel_CG3723	NP_001262793.1	4496	dynein heavy chain at 93AB, isoform C
3R	NT_033777.3	21025019	21042419	-	42485	Dhc93AB	Dmel_CG3723	NP_524424.2	4486	dynein heavy chain at 93AB, isoform B
3R	NT_033777.3	21044093	21044782	+	42486	CG12278	Dmel_CG12278	NP_650934.1	229	uncharacterized protein Dmel_CG12278
3R	NT_033777.3	21044921	21045811	-	42487	CG31189	Dmel_CG31189	NP_732580.3	258	uncharacterized protein Dmel_CG31189
3R	NT_033777.3	21046046	21046983	-	326125	CG31207	Dmel_CG31207	NP_732581.1	258	uncharacterized protein Dmel_CG31207
3R	NT_033777.3	21047828	21048726	-	42488	CG7079	Dmel_CG7079	NP_650936.1	255	CG7079, isoform A
3R	NT_033777.3	21047828	21048726	-	42488	CG7079	Dmel_CG7079	NP_001287436.1	255	CG7079, isoform B
3R	NT_033777.3	21050091	21050915	-	42489	CG17279	Dmel_CG17279	NP_650937.2	234	uncharacterized protein Dmel_CG17279, isoform B
3R	NT_033777.3	21050248	21050915	-	42489	CG17279	Dmel_CG17279	NP_001287437.1	159	uncharacterized protein Dmel_CG17279, isoform C
3R	NT_033777.3	21052059	21058467	-	42490	Mvl	Dmel_CG3671	NP_001262795.1	639	malvolio, isoform H
3R	NT_033777.3	21052188	21058467	-	42490	Mvl	Dmel_CG3671	NP_732584.1	596	malvolio, isoform B
3R	NT_033777.3	21052188	21058467	-	42490	Mvl	Dmel_CG3671	NP_524425.2	596	malvolio, isoform E
3R	NT_033777.3	21052188	21058467	-	42490	Mvl	Dmel_CG3671	NP_001163668.1	596	malvolio, isoform D
3R	NT_033777.3	21053531	21058467	-	42490	Mvl	Dmel_CG3671	NP_001247221.1	607	malvolio, isoform G
3R	NT_033777.3	21054960	21058467	-	42490	Mvl	Dmel_CG3671	NP_996251.2	605	malvolio, isoform F
3R	NT_033777.3	21062226	21064064	-	42491	Cortactin	Dmel_CG3637	NP_001247224.1	559	cortactin, isoform D
3R	NT_033777.3	21062226	21064064	-	42491	Cortactin	Dmel_CG3637	NP_524426.2	559	cortactin, isoform A
3R	NT_033777.3	21062226	21064064	-	42491	Cortactin	Dmel_CG3637	NP_001247223.1	559	cortactin, isoform C
3R	NT_033777.3	21062226	21064064	-	42491	Cortactin	Dmel_CG3637	NP_001247222.1	559	cortactin, isoform B
3R	NT_033777.3	21067470	21069366	+	42492	AnxB9	Dmel_CG5730	NP_996253.1	324	annexin B9, isoform C
3R	NT_033777.3	21067470	21070777	+	42492	AnxB9	Dmel_CG5730	NP_476603.1	324	annexin B9, isoform B
3R	NT_033777.3	21067470	21069366	+	42492	AnxB9	Dmel_CG5730	NP_001262796.1	324	annexin B9, isoform E
3R	NT_033777.3	21067470	21069366	+	42492	AnxB9	Dmel_CG5730	NP_001262797.1	324	annexin B9, isoform F
3R	NT_033777.3	21067470	21070331	+	42492	AnxB9	Dmel_CG5730	NP_476604.1	324	annexin B9, isoform A
3R	NT_033777.3	21067470	21070777	+	42492	AnxB9	Dmel_CG5730	NP_996252.1	324	annexin B9, isoform D
3R	NT_033777.3	21071013	21073218	-	42493	r-l	Dmel_CG3593	NP_524427.1	493	rudimentary-like
3R	NT_033777.3	21074007	21076798	+	42494	dmrt93B	Dmel_CG5737	NP_524428.1	325	doublesex-Mab related 93B
3R	NT_033777.3	21076914	21080683	-	42495	HHEX	Dmel_CG7056	NP_650938.2	323	hematopoietically expressed homeobox
3R	NT_033777.3	21083846	21097270	-	42496	RhoGAP93B	Dmel_CG3421	NP_650939.2	1330	Rho GTPase activating protein at 93B
3R	NT_033777.3	21098329	21101572	-	42497	CG7044	Dmel_CG7044	NP_650940.2	974	CG7044
3R	NT_033777.3	21102277	21105016	+	42498	CG5745	Dmel_CG5745	NP_650941.3	546	CG5745
3R	NT_033777.3	21105465	21107893	-	42499	Sec15	Dmel_CG7034	NP_650942.1	766	secretory 15
3R	NT_033777.3	21108607	21110707	+	42500	rtet	Dmel_CG5760	NP_524429.1	477	tetracycline resistance
3R	NT_033777.3	21111816	21115384	+	42501	Rab11	Dmel_CG5771	NP_477170.1	214	Rab11, isoform B
3R	NT_033777.3	21111816	21115384	+	42501	Rab11	Dmel_CG5771	NP_599137.1	214	Rab11, isoform A
3R	NT_033777.3	21116304	21117855	+	42502	ppan	Dmel_CG5786	NP_476979.1	460	peter pan
3R	NT_033777.3	21117924	21118784	-	42503	Bdbt	Dmel_CG17282	NP_650943.1	286	bride of doubletime
3R	NT_033777.3	21120459	21126994	-	42504	slmb	Dmel_CG3412	NP_001262802.1	597	supernumerary limbs, isoform B
3R	NT_033777.3	21120720	21126994	-	42504	slmb	Dmel_CG3412	NP_524430.1	510	supernumerary limbs, isoform A
3R	NT_033777.3	21120720	21126994	-	42504	slmb	Dmel_CG3412	NP_001262801.1	510	supernumerary limbs, isoform C
3R	NT_033777.3	21127978	21128893	+	42505	CG5793	Dmel_CG5793	NP_001247225.2	220	CG5793, isoform E
3R	NT_033777.3	21127978	21128893	+	42505	CG5793	Dmel_CG5793	NP_650944.3	220	CG5793, isoform D
3R	NT_033777.3	21127978	21128893	+	42505	CG5793	Dmel_CG5793	NP_001247226.1	220	CG5793, isoform B
3R	NT_033777.3	21128950	21129717	-	42506	Obp93a	Dmel_CG17284	NP_650945.1	196	Odorant-binding protein 93a
3R	NT_033777.3	21130444	21132498	+	42507	Ice2	Dmel_CG10825	NP_650946.3	684	interacts with the C terminus of ELL 2, isoform A
3R	NT_033777.3	21131314	21132498	+	42507	Ice2	Dmel_CG10825	NP_001097852.1	394	interacts with the C terminus of ELL 2, isoform C
3R	NT_033777.3	21132753	21133825	-	42508	CG7009	Dmel_CG7009	NP_650947.1	320	CG7009
3R	NT_033777.3	21134411	21137850	+	42509	Usp8	Dmel_CG5798	NP_650948.2	896	ubiquitin specific protease 8, isoform A
3R	NT_033777.3	21136560	21137850	+	42509	Usp8	Dmel_CG5798	NP_001247227.1	367	ubiquitin specific protease 8, isoform B
3R	NT_033777.3	21138861	21140039	+	42510	meigo	Dmel_CG5802	NP_650949.1	338	medial glomeruli, isoform A
3R	NT_033777.3	21138861	21140039	+	42510	meigo	Dmel_CG5802	NP_001097853.1	338	medial glomeruli, isoform B
3R	NT_033777.3	21154927	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_732594.1	947	SNF4/AMP-activated protein kinase gamma subunit, isoform A
3R	NT_033777.3	21154927	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_536757.2	947	SNF4/AMP-activated protein kinase gamma subunit, isoform B
3R	NT_033777.3	21159390	21161054	-	42512	cDIP	Dmel_CG10824	NP_650951.1	554	common Dpr-interacting protein
3R	NT_033777.3	21163790	21165076	+	42513	CG5810	Dmel_CG5810	NP_650952.2	428	CG5810
3R	NT_033777.3	21165714	21168128	-	42514	Snmp1	Dmel_CG7000	NP_650953.1	551	sensory neuron membrane protein 1, isoform A
3R	NT_033777.3	21165714	21168128	-	42514	Snmp1	Dmel_CG7000	NP_001262803.1	551	sensory neuron membrane protein 1, isoform B
3R	NT_033777.3	21173975	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001163671.1	1400	SNF4/AMP-activated protein kinase gamma subunit, isoform R
3R	NT_033777.3	21173975	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001163672.1	1400	SNF4/AMP-activated protein kinase gamma subunit, isoform S
3R	NT_033777.3	21173975	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_732598.1	1400	SNF4/AMP-activated protein kinase gamma subunit, isoform F
3R	NT_033777.3	21185138	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001097855.1	614	SNF4/AMP-activated protein kinase gamma subunit, isoform N
3R	NT_033777.3	21185138	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001097854.1	614	SNF4/AMP-activated protein kinase gamma subunit, isoform M
3R	NT_033777.3	21185138	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001036736.2	614	SNF4/AMP-activated protein kinase gamma subunit, isoform O
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001163670.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform Q
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001036738.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform J
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_732600.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform E
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_732599.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform C
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001036737.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform K
3R	NT_033777.3	21200971	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001163669.1	906	SNF4/AMP-activated protein kinase gamma subunit, isoform P
3R	NT_033777.3	21205109	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_732601.1	814	SNF4/AMP-activated protein kinase gamma subunit, isoform G
3R	NT_033777.3	21210543	21212527	+	42515	SNF4Agamma	Dmel_CG17299	NP_001036739.1	538	SNF4/AMP-activated protein kinase gamma subunit, isoform I
3R	NT_033777.3	21215160	21216147	+	42516	CG5862	Dmel_CG5862	NP_650954.1	309	CG5862
3R	NT_033777.3	21217359	21218708	-	42517	Smyd5	Dmel_CG3353	NP_650955.1	393	SET and MYND domain containing, class 5
3R	NT_033777.3	21219222	21222639	+	42518	Oga	Dmel_CG5871	NP_650956.1	1019	O-GlcNAcase
3R	NT_033777.3	21222857	21223533	-	42519	CG3337	Dmel_CG3337	NP_001303427.1	204	CG3337, isoform B
3R	NT_033777.3	21222857	21223533	-	42519	CG3337	Dmel_CG3337	NP_650957.1	204	CG3337, isoform A
3R	NT_033777.3	21223870	21228825	+	42520	Nelf-A	Dmel_CG5874	NP_001262804.1	1264	negative elongation factor A, isoform B
3R	NT_033777.3	21223870	21228786	+	42520	Nelf-A	Dmel_CG5874	NP_001287438.1	1250	negative elongation factor A, isoform C
3R	NT_033777.3	21223870	21228786	+	42520	Nelf-A	Dmel_CG5874	NP_650958.2	1251	negative elongation factor A, isoform A
3R	NT_033777.3	21230042	21233017	-	42521	e	Dmel_CG3331	NP_524431.2	879	ebony
3R	NT_033777.3	21242641	21245329	+	42522	CG5892	Dmel_CG5892	NP_650959.2	738	CG5892
3R	NT_033777.3	21258934	21262801	+	42523	ETHR	Dmel_CG5911	NP_650960.2	471	ETHR, isoform A
3R	NT_033777.3	21258934	21264971	+	42523	ETHR	Dmel_CG5911	NP_996255.1	461	ETHR, isoform B
3R	NT_033777.3	21258934	21262801	+	42523	ETHR	Dmel_CG5911	NP_001287439.1	471	ETHR, isoform C
3R	NT_033777.3	21266948	21268793	-	42524	Rab1	Dmel_CG3320	NP_732610.1	205	Rab1
3R	NT_033777.3	21269409	21269953	-	42525	AP-2sigma	Dmel_CG6056	NP_650961.2	142	adaptor protein complex 2, sigma subunit
3R	NT_033777.3	21270216	21271042	+	42526	CG5919	Dmel_CG5919	NP_001163673.1	256	CG5919, isoform B
3R	NT_033777.3	21270216	21271042	+	42526	CG5919	Dmel_CG5919	NP_650962.1	256	CG5919, isoform A
3R	NT_033777.3	21271955	21273530	-	42527	CG3308	Dmel_CG3308	NP_650963.2	319	CG3308
3R	NT_033777.3	21275401	21276211	-	42528	CG3301	Dmel_CG3301	NP_732612.1	250	CG3301, isoform B
3R	NT_033777.3	21275401	21276211	-	42528	CG3301	Dmel_CG3301	NP_001287440.1	250	CG3301, isoform C
3R	NT_033777.3	21275401	21276211	-	42528	CG3301	Dmel_CG3301	NP_650964.1	250	CG3301, isoform A
3R	NT_033777.3	21279123	21292068	-	42530	SIFaR	Dmel_CG10823	NP_001163674.1	758	SIFamide receptor, isoform C
3R	NT_033777.3	21279123	21292068	-	42530	SIFaR	Dmel_CG10823	NP_650966.2	758	SIFamide receptor, isoform A
3R	NT_033777.3	21283275	21283921	+	42529	CG17298	Dmel_CG17298	NP_650965.1	95	uncharacterized protein Dmel_CG17298
3R	NT_033777.3	21321054	21348494	-	42531	CG16791	Dmel_CG16791	NP_001287441.1	1049	uncharacterized protein Dmel_CG16791, isoform B
3R	NT_033777.3	21321054	21348494	-	42531	CG16791	Dmel_CG16791	NP_001287442.1	1105	uncharacterized protein Dmel_CG16791, isoform C
3R	NT_033777.3	21321054	21348494	-	42531	CG16791	Dmel_CG16791	NP_001287443.1	1046	uncharacterized protein Dmel_CG16791, isoform D
3R	NT_033777.3	21321054	21348494	-	42531	CG16791	Dmel_CG16791	NP_650967.2	1108	uncharacterized protein Dmel_CG16791, isoform A
3R	NT_033777.3	21351027	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732623.2	499	modifier of mdg4, isoform AF
3R	NT_033777.3	21351666	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732619.1	475	modifier of mdg4, isoform R
3R	NT_033777.3	21352386	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732620.1	485	modifier of mdg4, isoform A
3R	NT_033777.3	21352834	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_524936.2	536	modifier of mdg4, isoform F
3R	NT_033777.3	21353379	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732621.1	520	modifier of mdg4, isoform D
3R	NT_033777.3	21353916	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_001097858.1	540	modifier of mdg4, isoform AC
3R	NT_033777.3	21354524	21355087	-	19835051	pre-mod(mdg4)-B	Dmel_CG44884	NP_001303515.1	94	pre-mod(mdg4)-G, isoform A
3R	NT_033777.3	21354524	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732622.1	497	modifier of mdg4, isoform G
3R	NT_033777.3	21354524	21355087	-	19835051	pre-mod(mdg4)-B	Dmel_CG44884	NP_001303516.1	94	pre-mod(mdg4)-G, isoform B
3R	NT_033777.3	21355220	21355555	-	19835051	pre-mod(mdg4)-B	Dmel_CG44884	NP_001303511.1	111	pre-mod(mdg4)-H, isoform A
3R	NT_033777.3	21355220	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732624.1	514	modifier of mdg4, isoform H
3R	NT_033777.3	21355220	21355555	-	19835051	pre-mod(mdg4)-B	Dmel_CG44884	NP_001303512.1	111	pre-mod(mdg4)-H, isoform B
3R	NT_033777.3	21355962	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732625.1	498	modifier of mdg4, isoform B
3R	NT_033777.3	21355962	21356249	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303514.1	95	pre-mod(mdg4)-B, isoform C
3R	NT_033777.3	21355962	21356249	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303513.1	95	pre-mod(mdg4)-B, isoform B
3R	NT_033777.3	21355962	21356249	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287449.1	95	pre-mod(mdg4)-B, isoform A
3R	NT_033777.3	21356444	21356966	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287446.1	138	pre-mod(mdg4)-I, isoform A
3R	NT_033777.3	21356444	21356966	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303521.1	138	pre-mod(mdg4)-I, isoform B
3R	NT_033777.3	21356444	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732626.1	541	modifier of mdg4, isoform I
3R	NT_033777.3	21357150	21357362	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287448.1	70	pre-mod(mdg4)-J, isoform A
3R	NT_033777.3	21357150	21357362	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303517.1	70	pre-mod(mdg4)-J, isoform B
3R	NT_033777.3	21357150	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732627.1	473	modifier of mdg4, isoform J
3R	NT_033777.3	21357546	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732628.1	539	modifier of mdg4, isoform P
3R	NT_033777.3	21357546	21358202	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303518.1	136	pre-mod(mdg4)-P, isoform B
3R	NT_033777.3	21357546	21358202	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287444.1	136	pre-mod(mdg4)-P, isoform A
3R	NT_033777.3	21358373	21358594	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303520.1	73	pre-mod(mdg4)-L, isoform B
3R	NT_033777.3	21358373	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732629.1	476	modifier of mdg4, isoform L
3R	NT_033777.3	21358373	21358594	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287445.1	73	pre-mod(mdg4)-L, isoform A
3R	NT_033777.3	21358744	21359067	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001287447.1	107	pre-mod(mdg4)-K, isoform A
3R	NT_033777.3	21358744	21359067	-	19834930	pre-mod(mdg4)-I	Dmel_CG44883	NP_001303519.1	107	pre-mod(mdg4)-K, isoform B
3R	NT_033777.3	21358744	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732630.1	510	modifier of mdg4, isoform K
3R	NT_033777.3	21360392	21361088	+	10178861	pre-mod(mdg4)-T	Dmel_CG42769	NP_001189255.2	207	pre-mod(mdg4)-T
3R	NT_033777.3	21361400	21361830	+	10178861	pre-mod(mdg4)-T	Dmel_CG42769	NP_001189256.1	123	pre-mod(mdg4)-Z
3R	NT_033777.3	21362564	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732631.1	503	modifier of mdg4, isoform M
3R	NT_033777.3	21363280	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732632.1	603	modifier of mdg4, isoform E
3R	NT_033777.3	21363280	21363882	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001287451.1	200	pre-mod(mdg4)-E, isoform A
3R	NT_033777.3	21363280	21363882	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001303524.1	200	pre-mod(mdg4)-E, isoform C
3R	NT_033777.3	21363280	21363882	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001287452.1	200	pre-mod(mdg4)-E, isoform B
3R	NT_033777.3	21364062	21364373	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001287450.1	103	pre-mod(mdg4)-AB, isoform A
3R	NT_033777.3	21364062	21364373	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001303523.1	103	pre-mod(mdg4)-AB, isoform B
3R	NT_033777.3	21364062	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_001097857.1	506	modifier of mdg4, isoform AB
3R	NT_033777.3	21364527	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732633.1	534	modifier of mdg4, isoform C
3R	NT_033777.3	21364527	21364990	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001303522.1	131	pre-mod(mdg4)-C, isoform C
3R	NT_033777.3	21364527	21364990	-	19836240	pre-mod(mdg4)-AB	Dmel_CG44877	NP_001287453.1	131	pre-mod(mdg4)-C, isoform B
3R	NT_033777.3	21366006	21366299	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001189258.1	97	pre-mod(mdg4)-Y, isoform A
3R	NT_033777.3	21366006	21366299	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001303526.1	97	pre-mod(mdg4)-Y, isoform B
3R	NT_033777.3	21366452	21366715	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001189257.1	87	pre-mod(mdg4)-X, isoform A
3R	NT_033777.3	21366452	21366715	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001303529.1	87	pre-mod(mdg4)-X, isoform B
3R	NT_033777.3	21366976	21367206	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001303531.1	76	pre-mod(mdg4)-AE, isoform B
3R	NT_033777.3	21366976	21367206	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001189260.1	76	pre-mod(mdg4)-AE, isoform A
3R	NT_033777.3	21367365	21367688	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001303525.1	107	pre-mod(mdg4)-AD, isoform B
3R	NT_033777.3	21367365	21367688	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001189259.1	107	pre-mod(mdg4)-AD, isoform A
3R	NT_033777.3	21367912	21368220	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001303527.1	102	pre-mod(mdg4)-W, isoform B
3R	NT_033777.3	21367912	21368220	+	10178888	pre-mod(mdg4)-AD	Dmel_CG42773	NP_001189261.1	102	pre-mod(mdg4)-W, isoform A
3R	NT_033777.3	21368382	21368876	+	10178797	pre-mod(mdg4)-X	Dmel_CG42772	NP_001334695.1	164	pre-mod(mdg4)-V, isoform C
3R	NT_033777.3	21368382	21368876	+	10178797	pre-mod(mdg4)-X	Dmel_CG42772	NP_001303530.1	164	pre-mod(mdg4)-V, isoform B
3R	NT_033777.3	21368382	21368876	+	10178797	pre-mod(mdg4)-X	Dmel_CG42772	NP_001189262.3	164	pre-mod(mdg4)-V, isoform A, partial
3R	NT_033777.3	21369464	21369715	+	10178816	pre-mod(mdg4)-U	Dmel_CG42777	NP_001303528.1	83	pre-mod(mdg4)-U, isoform B
3R	NT_033777.3	21369464	21369715	+	10178816	pre-mod(mdg4)-U	Dmel_CG42777	NP_001189263.1	83	pre-mod(mdg4)-U, isoform A
3R	NT_033777.3	21369464	21369715	+	10178816	pre-mod(mdg4)-U	Dmel_CG42777	NP_001334696.1	83	pre-mod(mdg4)-U, isoform C
3R	NT_033777.3	21370329	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732634.1	506	modifier of mdg4, isoform S
3R	NT_033777.3	21370968	21371225	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303536.1	85	pre-mod(mdg4)-AA, isoform A
3R	NT_033777.3	21370968	21371225	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303537.1	85	pre-mod(mdg4)-AA, isoform B
3R	NT_033777.3	21370968	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_001097856.1	488	modifier of mdg4, isoform AA
3R	NT_033777.3	21371637	21372065	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303535.1	142	pre-mod(mdg4)-O, isoform B
3R	NT_033777.3	21371637	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732635.1	545	modifier of mdg4, isoform O
3R	NT_033777.3	21371637	21372065	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303534.1	142	pre-mod(mdg4)-O, isoform A
3R	NT_033777.3	21372545	21377032	-	49228	mod(mdg4)	Dmel_CG32491	NP_732636.1	580	modifier of mdg4, isoform N
3R	NT_033777.3	21372545	21373078	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303532.1	177	pre-mod(mdg4)-N, isoform A
3R	NT_033777.3	21372545	21373078	-	26067060	pre-mod(mdg4)-AA	Dmel_CG45988	NP_001303533.1	177	pre-mod(mdg4)-N, isoform B
3R	NT_033777.3	21376819	21361088	+	49228	-	-	NP_788698.1	610	modifier of mdg4, isoform T
3R	NT_033777.3	21376819	21367206	+	49228	-	-	NP_001247229.1	479	modifier of mdg4, isoform AE
3R	NT_033777.3	21376819	21368220	+	49228	-	-	NP_788702.1	505	modifier of mdg4, isoform W
3R	NT_033777.3	21376819	21366715	+	49228	-	-	NP_788701.1	490	modifier of mdg4, isoform X
3R	NT_033777.3	21376819	21368876	+	49228	-	-	NP_788703.1	567	modifier of mdg4, isoform V
3R	NT_033777.3	21376819	21369715	+	49228	-	-	NP_788704.1	486	modifier of mdg4, isoform U
3R	NT_033777.3	21376819	21361830	+	49228	-	-	NP_788699.1	526	modifier of mdg4, isoform Z
3R	NT_033777.3	21376819	21366299	+	49228	-	-	NP_788700.1	500	modifier of mdg4, isoform Y
3R	NT_033777.3	21376819	21367688	+	49228	-	-	NP_001247228.1	510	modifier of mdg4, isoform AD
3R	NT_033777.3	21379247	21381827	+	42536	tin	Dmel_CG7895	NP_524433.1	416	tinman
3R	NT_033777.3	21389015	21390284	+	42537	bap	Dmel_CG7902	NP_732637.1	382	bagpipe
3R	NT_033777.3	21397866	21399725	-	42538	CG6475	Dmel_CG6475	NP_001097859.4	526	CG6475
3R	NT_033777.3	21404098	21406517	+	42539	CG7907	Dmel_CG7907	NP_001097860.1	753	CG7907, isoform B
3R	NT_033777.3	21404098	21406517	+	42539	CG7907	Dmel_CG7907	NP_001097861.1	753	CG7907, isoform C
3R	NT_033777.3	21407452	21408183	+	42540	CheB93a	Dmel_CG15503	NP_650970.2	200	chemosensory protein B 93a
3R	NT_033777.3	21409127	21409860	+	318736	CheB93b	Dmel_CG31438	NP_732641.2	203	chemosensory protein B 93b
3R	NT_033777.3	21410383	21433967	-	42541	lbl	Dmel_CG6570	NP_001262805.1	410	ladybird late, isoform C
3R	NT_033777.3	21410549	21433967	-	42541	lbl	Dmel_CG6570	NP_524434.2	372	ladybird late, isoform A
3R	NT_033777.3	21426922	21433967	-	42541	lbl	Dmel_CG6570	NP_001138092.1	294	ladybird late, isoform B
3R	NT_033777.3	21441970	21446093	-	42542	lbe	Dmel_CG6545	NP_524435.2	479	ladybird early
3R	NT_033777.3	21482387	21487254	+	42543	Fancm	Dmel_CG7922	NP_650971.2	1489	fanconi anemia group M helicase, isoform A
3R	NT_033777.3	21482387	21487254	+	42543	Fancm	Dmel_CG7922	NP_001262806.1	1489	fanconi anemia group M helicase, isoform B
3R	NT_033777.3	21500258	21512250	+	42544	C15	Dmel_CG7937	NP_476873.2	339	C15
3R	NT_033777.3	21521056	21525547	+	42545	CG7956	Dmel_CG7956	NP_001163676.1	662	CG7956, isoform E
3R	NT_033777.3	21521056	21527596	+	42545	CG7956	Dmel_CG7956	NP_001163675.1	1070	CG7956, isoform D
3R	NT_033777.3	21521056	21527596	+	42545	CG7956	Dmel_CG7956	NP_001036740.2	1142	CG7956, isoform F
3R	NT_033777.3	21521056	21527213	+	42545	CG7956	Dmel_CG7956	NP_650972.2	1000	CG7956, isoform A
3R	NT_033777.3	21521056	21526921	+	42545	CG7956	Dmel_CG7956	NP_001014644.3	987	CG7956, isoform G
3R	NT_033777.3	21548910	21556858	-	42547	slou	Dmel_CG6534	NP_001262808.1	698	slouch, isoform B
3R	NT_033777.3	21549027	21556858	-	42547	slou	Dmel_CG6534	NP_476657.1	659	slouch, isoform A
3R	NT_033777.3	21567691	21569028	-	42548	CG15498	Dmel_CG15498	NP_650974.1	281	uncharacterized protein Dmel_CG15498
3R	NT_033777.3	21573391	21580481	-	42549	InR	Dmel_CG18402	NP_001138094.1	2144	Insulin-like receptor, isoform C
3R	NT_033777.3	21573391	21580481	-	42549	InR	Dmel_CG18402	NP_524436.2	2144	Insulin-like receptor, isoform A
3R	NT_033777.3	21573391	21580481	-	42549	InR	Dmel_CG18402	NP_001138095.1	2144	Insulin-like receptor, isoform D
3R	NT_033777.3	21573391	21580481	-	42549	InR	Dmel_CG18402	NP_001138093.1	2144	Insulin-like receptor, isoform B
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_001262809.1	821	E2F transcription factor 1, isoform D
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_524437.2	805	E2F transcription factor 1, isoform A
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_001287455.1	805	E2F transcription factor 1, isoform F
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_001287454.1	821	E2F transcription factor 1, isoform E
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_732646.1	805	E2F transcription factor 1, isoform B
3R	NT_033777.3	21621569	21626497	-	42550	E2f1	Dmel_CG6376	NP_732647.1	805	E2F transcription factor 1, isoform C
3R	NT_033777.3	21661829	21662864	-	42551	Archease	Dmel_CG6353	NP_650975.1	156	archease
3R	NT_033777.3	21665578	21666526	+	42552	CG15497	Dmel_CG15497	NP_650976.1	260	uncharacterized protein Dmel_CG15497
3R	NT_033777.3	21666614	21671645	-	42553	DNApol-alpha180	Dmel_CG6349	NP_536736.2	1488	DNA polymerase alpha 180kD
3R	NT_033777.3	21673360	21719340	-	42554	CG31176	Dmel_CG31176	NP_732650.1	460	uncharacterized protein Dmel_CG31176
3R	NT_033777.3	21736047	21736267	-	8673963	Sfp93F	Dmel_CG42608	NP_001163677.1	53	seminal fluid protein 93F
3R	NT_033777.3	21736570	21736824	-	10178817	CG42869	Dmel_CG42869	NP_001189264.2	66	uncharacterized protein Dmel_CG42869
3R	NT_033777.3	21737008	21737356	-	10178911	CG42870	Dmel_CG42870	NP_001189265.2	94	uncharacterized protein Dmel_CG42870
3R	NT_033777.3	21738563	21739099	-	3885584	CG34034	Dmel_CG34034	NP_001163678.1	135	uncharacterized protein Dmel_CG34034
3R	NT_033777.3	21740168	21744359	+	42556	CG5849	Dmel_CG5849	NP_650979.1	968	CG5849, isoform A
3R	NT_033777.3	21740168	21742721	+	42556	CG5849	Dmel_CG5849	NP_001163679.1	449	CG5849, isoform B
3R	NT_033777.3	21745305	21748924	+	326133	CG31343	Dmel_CG31343	NP_732652.1	961	uncharacterized protein Dmel_CG31343
3R	NT_033777.3	21749990	21753174	+	42557	CG31233	Dmel_CG31233	NP_001303538.1	952	uncharacterized protein Dmel_CG31233, isoform B
3R	NT_033777.3	21749990	21753174	+	42557	CG31233	Dmel_CG31233	NP_732653.2	952	uncharacterized protein Dmel_CG31233, isoform A
3R	NT_033777.3	21754569	21757652	+	318622	CG31198	Dmel_CG31198	NP_732654.1	940	uncharacterized protein Dmel_CG31198
3R	NT_033777.3	21758774	21769301	+	42558	CG42335	Dmel_CG42335	NP_732655.3	924	uncharacterized protein Dmel_CG42335, partial
3R	NT_033777.3	21769551	21770194	+	42560	Burs	Dmel_CG13419	NP_650983.1	173	bursicon
3R	NT_033777.3	21770529	21775333	-	42561	GABA-B-R2	Dmel_CG6706	NP_524438.1	1221	metabotropic GABA-B receptor subtype 2, isoform B
3R	NT_033777.3	21770529	21775333	-	42561	GABA-B-R2	Dmel_CG6706	NP_732658.1	1220	metabotropic GABA-B receptor subtype 2, isoform A
3R	NT_033777.3	21770529	21775333	-	42561	GABA-B-R2	Dmel_CG6706	NP_001287456.1	1224	metabotropic GABA-B receptor subtype 2, isoform C
3R	NT_033777.3	21776138	21777213	+	42562	CG6800	Dmel_CG6800	NP_650984.1	302	CG6800
3R	NT_033777.3	21777289	21777766	-	42563	RpI12	Dmel_CG13418	NP_524439.1	120	RpI12
3R	NT_033777.3	21778352	21779761	-	42564	tsl	Dmel_CG6705	NP_001262810.1	353	torso-like, isoform C
3R	NT_033777.3	21778352	21779761	-	42564	tsl	Dmel_CG6705	NP_732660.1	353	torso-like, isoform B
3R	NT_033777.3	21778352	21779761	-	42564	tsl	Dmel_CG6705	NP_524440.2	353	torso-like, isoform A
3R	NT_033777.3	21786590	21820705	-	42567	CASK	Dmel_CG6703	NP_001262811.1	929	CASK, isoform H
3R	NT_033777.3	21786683	21804064	-	42567	CASK	Dmel_CG6703	NP_732661.1	591	CASK, isoform A
3R	NT_033777.3	21786683	21820705	-	42567	CASK	Dmel_CG6703	NP_524441.2	898	CASK, isoform B
3R	NT_033777.3	21786683	21820705	-	42567	CASK	Dmel_CG6703	NP_001163681.1	916	CASK, isoform F
3R	NT_033777.3	21786683	21804064	-	42567	CASK	Dmel_CG6703	NP_001097862.1	591	CASK, isoform D
3R	NT_033777.3	21786683	21804064	-	42567	CASK	Dmel_CG6703	NP_732662.2	609	CASK, isoform G
3R	NT_033777.3	21786683	21803343	-	42567	CASK	Dmel_CG6703	NP_001097863.1	469	CASK, isoform E
3R	NT_033777.3	21832693	21834013	+	42568	Gr93a	Dmel_CG13417	NP_524442.2	419	gustatory receptor 93a
3R	NT_033777.3	21842521	21843765	-	117472	Gr93b	Dmel_CG31336	NP_732664.2	395	gustatory receptor 93b
3R	NT_033777.3	21844014	21845265	-	117471	Gr93c	Dmel_CG31173	NP_732665.1	397	gustatory receptor 93c
3R	NT_033777.3	21845454	21846659	-	117470	Gr93d	Dmel_CG31335	NP_732666.1	381	gustatory receptor 93d
3R	NT_033777.3	21851710	21855919	-	42571	glec	Dmel_CG6575	NP_524443.2	228	gliolectin
3R	NT_033777.3	21865278	21866172	+	42572	lsn	Dmel_CG6637	NP_650987.1	254	larsen
3R	NT_033777.3	21866243	21867843	-	42573	CG6569	Dmel_CG6569	NP_650988.1	426	CG6569, isoform A
3R	NT_033777.3	21866243	21867728	-	42573	CG6569	Dmel_CG6569	NP_732669.1	409	CG6569, isoform B
3R	NT_033777.3	21867294	21867843	-	42573	CG6569	Dmel_CG6569	NP_001097864.1	135	CG6569, isoform C
3R	NT_033777.3	21867352	21867843	-	42573	CG6569	Dmel_CG6569	NP_001262812.1	125	CG6569, isoform D
3R	NT_033777.3	21868096	21868648	+	42574	Cby	Dmel_CG13415	NP_650989.6	132	chibby, isoform E
3R	NT_033777.3	21868324	21868648	+	42574	Cby	Dmel_CG13415	NP_001262813.1	108	chibby, isoform C
3R	NT_033777.3	21868790	21869514	-	318616	CG31174	Dmel_CG31174	NP_732671.1	203	uncharacterized protein Dmel_CG31174, isoform A
3R	NT_033777.3	21868790	21869514	-	318616	CG31174	Dmel_CG31174	NP_001262814.1	202	uncharacterized protein Dmel_CG31174, isoform B
3R	NT_033777.3	21872035	21873521	+	326138	CG31431	Dmel_CG31431	NP_732672.1	361	uncharacterized protein Dmel_CG31431, isoform A
3R	NT_033777.3	21872035	21873521	+	326138	CG31431	Dmel_CG31431	NP_001247232.1	361	uncharacterized protein Dmel_CG31431, isoform C
3R	NT_033777.3	21872035	21873521	+	326138	CG31431	Dmel_CG31431	NP_001247231.1	361	uncharacterized protein Dmel_CG31431, isoform B
3R	NT_033777.3	21874159	21874812	+	42575	CG31178	Dmel_CG31178	NP_001138096.1	217	uncharacterized protein Dmel_CG31178
3R	NT_033777.3	21875490	21877631	+	42576	CG6656	Dmel_CG6656	NP_650991.1	395	CG6656
3R	NT_033777.3	21877947	21878588	-	326250	CG34148	Dmel_CG34148	NP_788708.2	139	uncharacterized protein Dmel_CG34148, isoform B
3R	NT_033777.3	21877947	21878389	-	326250	CG34148	Dmel_CG34148	NP_001303539.1	95	uncharacterized protein Dmel_CG34148, isoform D
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788705.1	614	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform A
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788710.1	609	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform E
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788709.1	609	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform D
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788706.1	614	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform B
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788707.1	614	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform C
3R	NT_033777.3	21878498	21880631	+	32625	P5CDh2	Dmel_CG33092	NP_788711.1	608	delta-1-Pyrroline-5-carboxylate dehydrogenase 2, isoform G
3R	NT_033777.3	21880926	21883220	+	42577	CG31465	Dmel_CG31465	NP_001262815.1	730	uncharacterized protein Dmel_CG31465, isoform B
3R	NT_033777.3	21880926	21883060	+	42577	CG31465	Dmel_CG31465	NP_001262816.1	690	uncharacterized protein Dmel_CG31465, isoform C
3R	NT_033777.3	21880926	21883899	+	42577	CG31465	Dmel_CG31465	NP_732682.1	952	uncharacterized protein Dmel_CG31465, isoform A
3R	NT_033777.3	21884066	21884431	-	42578	fit	Dmel_CG17820	NP_650993.1	121	female-specific independent of transformer
3R	NT_033777.3	21884798	21885535	-	42579	CG17819	Dmel_CG17819	NP_650994.1	186	uncharacterized protein Dmel_CG17819
3R	NT_033777.3	21885759	21887142	-	42580	dnd	Dmel_CG6560	NP_650995.1	179	dead end
3R	NT_033777.3	21887507	21905939	+	42581	CG6678	Dmel_CG6678	NP_650996.1	373	CG6678
3R	NT_033777.3	21889618	21889914	+	26067040	CG43844	Dmel_CG43844	NP_001303542.1	98	uncharacterized protein Dmel_CG43844, isoform F
3R	NT_033777.3	21889729	21889914	+	26067040	CG43844	Dmel_CG43844	NP_001303541.1	61	uncharacterized protein Dmel_CG43844, isoform E
3R	NT_033777.3	21889729	21889914	+	26067040	CG43844	Dmel_CG43844	NP_001303540.1	61	uncharacterized protein Dmel_CG43844, isoform D
3R	NT_033777.3	21911816	21913504	+	42582	CG6690	Dmel_CG6690	NP_650997.1	562	CG6690
3R	NT_033777.3	21913789	21915447	+	42583	CG17843	Dmel_CG17843	NP_650998.1	552	uncharacterized protein Dmel_CG17843
3R	NT_033777.3	21960814	22006504	+	44936	Eip93F	Dmel_CG18389	NP_001097865.1	1188	Ecdysone-induced protein 93F, isoform B
3R	NT_033777.3	21976030	22006504	+	44936	Eip93F	Dmel_CG18389	NP_652002.2	1165	Ecdysone-induced protein 93F, isoform A
3R	NT_033777.3	21976030	22006573	+	44936	Eip93F	Dmel_CG18389	NP_001262817.1	1188	Ecdysone-induced protein 93F, isoform C
3R	NT_033777.3	22014828	22016089	+	42585	CG6332	Dmel_CG6332	NP_650999.1	353	CG6332
3R	NT_033777.3	22016988	22019033	-	42586	CG6439	Dmel_CG6439	NP_651000.1	370	CG6439, isoform A
3R	NT_033777.3	22016988	22019033	-	42586	CG6439	Dmel_CG6439	NP_001163682.1	370	CG6439, isoform B
3R	NT_033777.3	22019860	22022931	-	42587	Mitofilin	Dmel_CG6455	NP_001262819.1	746	mitofilin, isoform E
3R	NT_033777.3	22019860	22022931	-	42587	Mitofilin	Dmel_CG6455	NP_001262818.1	739	mitofilin, isoform D
3R	NT_033777.3	22019860	22022931	-	42587	Mitofilin	Dmel_CG6455	NP_524444.3	739	mitofilin, isoform C
3R	NT_033777.3	22023608	22024208	+	42588	mRpL35	Dmel_CG13410	NP_651001.2	178	mitochondrial ribosomal protein L35
3R	NT_033777.3	22024366	22025404	-	42589	CG6028	Dmel_CG6028	NP_651002.3	293	CG6028
3R	NT_033777.3	22026135	22027037	-	42590	Cchl	Dmel_CG6022	NP_651003.1	281	cytochrome c heme lyase, isoform A
3R	NT_033777.3	22026135	22027037	-	42590	Cchl	Dmel_CG6022	NP_001262820.1	281	cytochrome c heme lyase, isoform B
3R	NT_033777.3	22028021	22029311	+	42591	ND-42	Dmel_CG6343	NP_524445.1	407	NADH dehydrogenase (ubiquinone) 42 kDa subunit, isoform A
3R	NT_033777.3	22028021	22029311	+	42591	ND-42	Dmel_CG6343	NP_732692.1	407	NADH dehydrogenase (ubiquinone) 42 kDa subunit, isoform B
3R	NT_033777.3	22028021	22029311	+	42591	ND-42	Dmel_CG6343	NP_001262821.1	407	NADH dehydrogenase (ubiquinone) 42 kDa subunit, isoform C
3R	NT_033777.3	22029706	22031723	-	42592	CG13409	Dmel_CG13409	NP_651004.1	547	uncharacterized protein Dmel_CG13409
3R	NT_033777.3	22032226	22034081	-	19835431	CG45099	Dmel_CG45099	NP_651005.1	576	CG6015
3R	NT_033777.3	22034082	22034186	-	19835431	CG45099	Dmel_CG45099	NP_001287458.1	34	uncharacterized protein Dmel_CG45099
3R	NT_033777.3	22034563	22035282	+	42594	Fadd	Dmel_CG12297	NP_651006.1	239	Fas-associated death domain
3R	NT_033777.3	22035835	22038283	+	42595	pit	Dmel_CG6375	NP_524446.3	680	pitchoune, isoform A
3R	NT_033777.3	22035835	22038283	+	42595	pit	Dmel_CG6375	NP_001287459.1	680	pitchoune, isoform C
3R	NT_033777.3	22035835	22038283	+	42595	pit	Dmel_CG6375	NP_732694.2	680	pitchoune, isoform B
3R	NT_033777.3	22043064	22074558	+	42596	how	Dmel_CG10293	NP_001262822.1	418	held out wings, isoform F
3R	NT_033777.3	22043064	22074558	+	42596	how	Dmel_CG10293	NP_001163683.1	405	held out wings, isoform D
3R	NT_033777.3	22043064	22072061	+	42596	how	Dmel_CG10293	NP_732695.1	375	held out wings, isoform B
3R	NT_033777.3	22043064	22074558	+	42596	how	Dmel_CG10293	NP_524447.2	405	held out wings, isoform A
3R	NT_033777.3	22043064	22074558	+	42596	how	Dmel_CG10293	NP_001163684.1	404	held out wings, isoform E
3R	NT_033777.3	22043064	22072966	+	42596	how	Dmel_CG10293	NP_001027203.1	380	held out wings, isoform C
3R	NT_033777.3	22080462	22083138	+	42597	CG13408	Dmel_CG13408	NP_651007.1	257	uncharacterized protein Dmel_CG13408
3R	NT_033777.3	22085603	22086323	-	42598	CG5778	Dmel_CG5778	NP_651008.1	117	CG5778, isoform A
3R	NT_033777.3	22085603	22086323	-	42598	CG5778	Dmel_CG5778	NP_001262823.1	117	CG5778, isoform C
3R	NT_033777.3	22087203	22087625	+	50055	CG5791	Dmel_CG5791	NP_001303434.1	98	CG5791, isoform C
3R	NT_033777.3	22087203	22087625	+	50055	CG5791	Dmel_CG5791	NP_001262824.1	98	CG5791, isoform B
3R	NT_033777.3	22087203	22087625	+	50055	CG5791	Dmel_CG5791	NP_652235.1	98	CG5791, isoform A
3R	NT_033777.3	22103414	22105590	+	42599	CG13407	Dmel_CG13407	NP_651009.1	444	uncharacterized protein Dmel_CG13407
3R	NT_033777.3	22113427	22115214	+	318610	Ir94a	Dmel_CG31164	NP_732699.1	595	ionotropic receptor 94a
3R	NT_033777.3	22115471	22117249	-	318728	Ir94b	Dmel_CG31424	NP_732700.2	592	ionotropic receptor 94b
3R	NT_033777.3	22117640	22119454	-	318727	Ir94c	Dmel_CG31423	NP_732701.2	604	ionotropic receptor 94c
3R	NT_033777.3	22124128	22133090	+	42600	CG42390	Dmel_CG42390	NP_001262825.1	1483	uncharacterized protein Dmel_CG42390, isoform E
3R	NT_033777.3	22124128	22133090	+	42600	CG42390	Dmel_CG42390	NP_996263.2	1435	uncharacterized protein Dmel_CG42390, isoform D
3R	NT_033777.3	22124128	22133090	+	42600	CG42390	Dmel_CG42390	NP_732702.3	1483	uncharacterized protein Dmel_CG42390, isoform B
3R	NT_033777.3	22174368	22293901	+	42601	SKIP	Dmel_CG31163	NP_001262828.1	1027	shal 
3R	NT_033777.3	22174368	22294285	+	42601	SKIP	Dmel_CG31163	NP_001262827.1	1080	shal 
3R	NT_033777.3	22174368	22293901	+	42601	SKIP	Dmel_CG31163	NP_001036742.2	1064	shal 
3R	NT_033777.3	22174368	22174754	+	42601	SKIP	Dmel_CG31163	NP_001262826.1	128	shal 
3R	NT_033777.3	22174368	22293901	+	42601	SKIP	Dmel_CG31163	NP_001247234.1	1034	shal 
3R	NT_033777.3	22174368	22293901	+	42601	SKIP	Dmel_CG31163	NP_732703.1	952	shal 
3R	NT_033777.3	22174368	22293901	+	42601	SKIP	Dmel_CG31163	NP_001247233.1	1064	shal 
3R	NT_033777.3	22212290	22216696	+	42602	Gld2	Dmel_CG5732	NP_001262829.1	1364	GLD2 poly(A) polymerase, isoform C
3R	NT_033777.3	22212290	22216696	+	42602	Gld2	Dmel_CG5732	NP_651012.2	1364	GLD2 poly(A) polymerase, isoform B
3R	NT_033777.3	22300339	22303661	+	42606	CG7084	Dmel_CG7084	NP_001287460.1	597	CG7084, isoform F
3R	NT_033777.3	22300339	22303661	+	42606	CG7084	Dmel_CG7084	NP_732707.1	597	CG7084, isoform B
3R	NT_033777.3	22300339	22303661	+	42606	CG7084	Dmel_CG7084	NP_001247235.2	597	CG7084, isoform E
3R	NT_033777.3	22300339	22303661	+	42606	CG7084	Dmel_CG7084	NP_651016.1	597	CG7084, isoform C
3R	NT_033777.3	22311910	22318717	-	42608	CG34377	Dmel_CG34377	NP_001303543.1	385	uncharacterized protein Dmel_CG34377, isoform E
3R	NT_033777.3	22311943	22318717	-	42608	CG34377	Dmel_CG34377	NP_651018.2	374	uncharacterized protein Dmel_CG34377, isoform A
3R	NT_033777.3	22311943	22318954	-	42608	CG34377	Dmel_CG34377	NP_001262830.1	453	uncharacterized protein Dmel_CG34377, isoform C
3R	NT_033777.3	22311943	22318717	-	42608	CG34377	Dmel_CG34377	NP_001287461.1	374	uncharacterized protein Dmel_CG34377, isoform D
3R	NT_033777.3	22311943	22318717	-	42608	CG34377	Dmel_CG34377	NP_001247236.1	374	uncharacterized protein Dmel_CG34377, isoform B
3R	NT_033777.3	22329368	22330441	+	42609	CG7080	Dmel_CG7080	NP_651019.1	334	CG7080
3R	NT_033777.3	22331069	22331801	+	3885576	CG33721	Dmel_CG33721	NP_001036743.1	181	uncharacterized protein Dmel_CG33721
3R	NT_033777.3	22332162	22332497	+	42610	CG13862	Dmel_CG13862	NP_651020.1	111	uncharacterized protein Dmel_CG13862
3R	NT_033777.3	22333186	22334000	-	42611	CG5391	Dmel_CG5391	NP_651021.1	177	CG5391
3R	NT_033777.3	22337122	22337619	-	42612	CG5388	Dmel_CG5388	NP_001287462.1	165	CG5388, isoform B
3R	NT_033777.3	22337122	22337619	-	42612	CG5388	Dmel_CG5388	NP_651022.1	165	CG5388, isoform A
3R	NT_033777.3	22341290	22342214	-	42613	CG5386	Dmel_CG5386	NP_651023.1	254	CG5386
3R	NT_033777.3	22352330	22356125	+	42614	rdhB	Dmel_CG7077	NP_651024.1	248	retinol dehydrogenase B, isoform A
3R	NT_033777.3	22352330	22356125	+	42614	rdhB	Dmel_CG7077	NP_001262831.1	248	retinol dehydrogenase B, isoform B
3R	NT_033777.3	22357629	22359953	+	42615	Sar1	Dmel_CG7073	NP_732717.1	193	Secretion-associated Ras-related 1, isoform A
3R	NT_033777.3	22357629	22359953	+	42615	Sar1	Dmel_CG7073	NP_996265.1	193	Secretion-associated Ras-related 1, isoform E
3R	NT_033777.3	22357629	22359953	+	42615	Sar1	Dmel_CG7073	NP_732719.1	193	Secretion-associated Ras-related 1, isoform D
3R	NT_033777.3	22357629	22359953	+	42615	Sar1	Dmel_CG7073	NP_732718.1	193	Secretion-associated Ras-related 1, isoform C
3R	NT_033777.3	22360970	22362295	-	42616	PSR	Dmel_CG5383	NP_001262832.1	441	phosphatidylserine receptor, isoform B
3R	NT_033777.3	22361069	22362295	-	42616	PSR	Dmel_CG5383	NP_651026.1	408	phosphatidylserine receptor, isoform A
3R	NT_033777.3	22362916	22363524	+	42617	CG7071	Dmel_CG7071	NP_001036744.1	160	muted, isoform A
3R	NT_033777.3	22362916	22363524	+	42617	CG7071	Dmel_CG7071	NP_001287464.1	160	muted, isoform B
3R	NT_033777.3	22363530	22364507	+	42617	CG7071	Dmel_CG7071	NP_996266.1	302	CG7071, isoform B
3R	NT_033777.3	22363530	22364507	+	42617	CG7071	Dmel_CG7071	NP_001287463.1	302	CG7071, isoform C
3R	NT_033777.3	22363530	22364507	+	42617	CG7071	Dmel_CG7071	NP_651027.1	302	CG7071, isoform A
3R	NT_033777.3	22364668	22365813	-	42618	CG5382	Dmel_CG5382	NP_732721.1	299	CG5382
3R	NT_033777.3	22366215	22367154	-	42619	CG5380	Dmel_CG5380	NP_001247237.1	293	CG5380, isoform B
3R	NT_033777.3	22366215	22367154	-	42619	CG5380	Dmel_CG5380	NP_651029.1	293	CG5380, isoform A
3R	NT_033777.3	22369524	22372481	+	42620	PyK	Dmel_CG7070	NP_524448.3	533	pyruvate kinase, isoform A
3R	NT_033777.3	22370799	22372481	+	42620	PyK	Dmel_CG7070	NP_732723.1	512	pyruvate kinase, isoform B
3R	NT_033777.3	22373237	22375471	+	42621	CG7069	Dmel_CG7069	NP_651030.1	744	CG7069
3R	NT_033777.3	22376035	22379813	+	42622	CG18596	Dmel_CG18596	NP_651031.1	1136	uncharacterized protein Dmel_CG18596
3R	NT_033777.3	22380167	22381138	+	4379861	CG34149	Dmel_CG34149	NP_001097869.1	305	uncharacterized protein Dmel_CG34149, isoform B
3R	NT_033777.3	22380167	22381138	+	4379861	CG34149	Dmel_CG34149	NP_001036745.1	305	uncharacterized protein Dmel_CG34149, isoform A
3R	NT_033777.3	22381429	22382031	+	12798510	CG43342	Dmel_CG43342	NP_001247238.1	180	uncharacterized protein Dmel_CG43342
3R	NT_033777.3	22382225	22386427	+	42624	CG43343	Dmel_CG43343	NP_732726.2	1304	uncharacterized protein Dmel_CG43343, isoform A
3R	NT_033777.3	22382225	22386427	+	42624	CG43343	Dmel_CG43343	NP_001163685.1	1291	uncharacterized protein Dmel_CG43343, isoform B
3R	NT_033777.3	22382225	22386427	+	42624	CG43343	Dmel_CG43343	NP_732725.2	1303	uncharacterized protein Dmel_CG43343, isoform C
3R	NT_033777.3	22386604	22388395	-	42625	CG5379	Dmel_CG5379	NP_001262833.1	303	CG5379, isoform B
3R	NT_033777.3	22386604	22388395	-	42625	CG5379	Dmel_CG5379	NP_651033.2	303	CG5379, isoform A
3R	NT_033777.3	22390042	22392083	+	42626	CG7059	Dmel_CG7059	NP_651034.2	267	CG7059, isoform A
3R	NT_033777.3	22390186	22392083	+	42626	CG7059	Dmel_CG7059	NP_788713.1	262	CG7059, isoform D
3R	NT_033777.3	22391204	22392083	+	42626	CG7059	Dmel_CG7059	NP_732730.1	253	CG7059, isoform C
3R	NT_033777.3	22392490	22393518	-	42627	CG13857	Dmel_CG13857	NP_651035.1	342	uncharacterized protein Dmel_CG13857
3R	NT_033777.3	22404447	22405016	+	42628	CG13856	Dmel_CG13856	NP_651036.1	189	uncharacterized protein Dmel_CG13856
3R	NT_033777.3	22406035	22408520	+	42629	CG13855	Dmel_CG13855	NP_651037.1	706	uncharacterized protein Dmel_CG13855
3R	NT_033777.3	22408670	22410663	-	42630	CG13850	Dmel_CG13850	NP_001262834.1	564	uncharacterized protein Dmel_CG13850, isoform B
3R	NT_033777.3	22408670	22410663	-	42630	CG13850	Dmel_CG13850	NP_651038.3	564	uncharacterized protein Dmel_CG13850, isoform A
3R	NT_033777.3	22411585	22418578	+	42632	lqfR	Dmel_CG42250	NP_732734.3	649	liquid facets-Related, isoform C
3R	NT_033777.3	22411585	22417310	+	42632	lqfR	Dmel_CG42250	NP_732736.2	1415	liquid facets-Related, isoform D
3R	NT_033777.3	22419238	22420956	-	42633	Nop56	Dmel_CG13849	NP_651040.3	496	Nop56
3R	NT_033777.3	22421589	22422674	+	42634	mats	Dmel_CG13852	NP_001262835.1	219	mob as tumor suppressor, isoform B
3R	NT_033777.3	22421589	22422674	+	42634	mats	Dmel_CG13852	NP_651041.3	219	mob as tumor suppressor, isoform A
3R	NT_033777.3	22421589	22422674	+	42634	mats	Dmel_CG13852	NP_001287465.1	219	mob as tumor suppressor, isoform C
3R	NT_033777.3	22423596	22424690	-	42635	pinta	Dmel_CG13848	NP_651042.1	273	prolonged depolarization afterpotential (PDA) is not apparent, isoform A
3R	NT_033777.3	22423596	22424690	-	42635	pinta	Dmel_CG13848	NP_001287466.1	273	prolonged depolarization afterpotential (PDA) is not apparent, isoform B
3R	NT_033777.3	22425534	22435667	-	42636	CG13847	Dmel_CG13847	NP_001262836.1	758	uncharacterized protein Dmel_CG13847, isoform C
3R	NT_033777.3	22425534	22435667	-	42636	CG13847	Dmel_CG13847	NP_651043.2	759	uncharacterized protein Dmel_CG13847, isoform B
3R	NT_033777.3	22440301	22446532	-	42637	CG12499	Dmel_CG12499	NP_651044.1	2059	uncharacterized protein Dmel_CG12499
3R	NT_033777.3	22446972	22447216	-	5740644	CG34288	Dmel_CG34288	NP_001097870.2	59	uncharacterized protein Dmel_CG34288
3R	NT_033777.3	22448416	22460500	+	42638	CG34376	Dmel_CG34376	NP_001097872.1	596	uncharacterized protein Dmel_CG34376, isoform B
3R	NT_033777.3	22448416	22459234	+	42638	CG34376	Dmel_CG34376	NP_732741.1	681	uncharacterized protein Dmel_CG34376, isoform A
3R	NT_033777.3	22460753	22461922	-	42641	Rpn7	Dmel_CG5378	NP_651048.1	389	regulatory particle non-ATPase 7
3R	NT_033777.3	22462603	22464040	+	42642	AP-2mu	Dmel_CG7057	NP_001163686.1	437	adaptor protein complex 2, mu subunit, isoform C
3R	NT_033777.3	22462603	22464040	+	42642	AP-2mu	Dmel_CG7057	NP_732744.1	437	adaptor protein complex 2, mu subunit, isoform A
3R	NT_033777.3	22462603	22464040	+	42642	AP-2mu	Dmel_CG7057	NP_651049.3	437	adaptor protein complex 2, mu subunit, isoform B
3R	NT_033777.3	22465275	22465875	+	42643	CG7054	Dmel_CG7054	NP_651050.1	179	CG7054
3R	NT_033777.3	22466091	22466621	+	42644	Pebp1	Dmel_CG18594	NP_651051.1	176	Phosphatidylethanolamine-binding protein 1
3R	NT_033777.3	22467146	22467982	-	42645	CG5377	Dmel_CG5377	NP_651052.1	278	CG5377
3R	NT_033777.3	22470485	22481906	+	42646	Nrx-1	Dmel_CG7050	NP_001262841.1	1525	neurexin 1, isoform G
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001262839.1	1825	neurexin 1, isoform E
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_524449.1	1837	neurexin 1, isoform A
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001262838.1	1840	neurexin 1, isoform D
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001262840.1	1847	neurexin 1, isoform F
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001163687.1	1840	neurexin 1, isoform B
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001262842.1	1840	neurexin 1, isoform H
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001262837.1	1837	neurexin 1, isoform C
3R	NT_033777.3	22470485	22483856	+	42646	Nrx-1	Dmel_CG7050	NP_001287467.1	1840	neurexin 1, isoform I
3R	NT_033777.3	22487294	22487978	+	42647	Pfdn5	Dmel_CG7048	NP_651053.1	168	prefoldin 5, isoform A
3R	NT_033777.3	22487294	22487978	+	42647	Pfdn5	Dmel_CG7048	NP_001163688.1	168	prefoldin 5, isoform B
3R	NT_033777.3	22488082	22488882	-	42648	CG5376	Dmel_CG5376	NP_651054.1	229	CG5376
3R	NT_033777.3	22489303	22491331	-	42649	T-cp1	Dmel_CG5374	NP_732748.1	557	Tcp1-like, isoform B
3R	NT_033777.3	22489303	22491331	-	42649	T-cp1	Dmel_CG5374	NP_524450.2	557	Tcp1-like, isoform A
3R	NT_033777.3	22491927	22492307	+	42650	tHMG1	Dmel_CG7045	NP_651055.1	126	testis-enriched HMG-box-containing protein 1
3R	NT_033777.3	22493016	22493664	+	42651	tHMG2	Dmel_CG7046	NP_001163689.1	134	testis-enriched HMG-box-containing protein 2, isoform B
3R	NT_033777.3	22493263	22493664	+	42651	tHMG2	Dmel_CG7046	NP_651056.1	133	testis-enriched HMG-box-containing protein 2, isoform A
3R	NT_033777.3	22509789	22515307	+	42652	Octbeta1R	Dmel_CG6919	NP_001034064.1	421	octopamine beta1 receptor, isoform B
3R	NT_033777.3	22509789	22515201	+	42652	Octbeta1R	Dmel_CG6919	NP_001163690.1	428	octopamine beta1 receptor, isoform C
3R	NT_033777.3	22509789	22516889	+	42652	Octbeta1R	Dmel_CG6919	NP_001262843.1	508	octopamine beta1 receptor, isoform E
3R	NT_033777.3	22509789	22516889	+	42652	Octbeta1R	Dmel_CG6919	NP_651057.1	508	octopamine beta1 receptor, isoform A
3R	NT_033777.3	22520317	22526872	-	42653	CG5346	Dmel_CG5346	NP_651058.1	403	CG5346
3R	NT_033777.3	22529052	22530452	-	326254	CG33099	Dmel_CG33099	NP_788714.1	331	uncharacterized protein Dmel_CG33099
3R	NT_033777.3	22530741	22531883	-	42654	CG33093	Dmel_CG33093	NP_788715.2	322	uncharacterized protein Dmel_CG33093
3R	NT_033777.3	22532715	22533767	-	42655	CG5326	Dmel_CG5326	NP_651060.1	277	CG5326
3R	NT_033777.3	22544423	22547077	-	42656	AdipoR	Dmel_CG5315	NP_001262844.1	444	adiponectin receptor, isoform E
3R	NT_033777.3	22544423	22547077	-	42656	AdipoR	Dmel_CG5315	NP_732758.1	444	adiponectin receptor, isoform C
3R	NT_033777.3	22544423	22547077	-	42656	AdipoR	Dmel_CG5315	NP_001247239.1	444	adiponectin receptor, isoform D
3R	NT_033777.3	22544423	22547077	-	42656	AdipoR	Dmel_CG5315	NP_651061.1	444	adiponectin receptor, isoform A
3R	NT_033777.3	22544423	22545995	-	42656	AdipoR	Dmel_CG5315	NP_732759.2	362	adiponectin receptor, isoform B
3R	NT_033777.3	22554700	22556123	+	42657	bond	Dmel_CG6921	NP_732761.1	322	james bond, isoform A
3R	NT_033777.3	22554700	22556123	+	42657	bond	Dmel_CG6921	NP_732762.1	322	james bond, isoform C
3R	NT_033777.3	22554700	22556123	+	42657	bond	Dmel_CG6921	NP_651062.3	322	james bond, isoform B
3R	NT_033777.3	22559008	22560309	-	42658	CG5278	Dmel_CG5278	NP_651063.1	295	CG5278
3R	NT_033777.3	22570503	22579716	+	42659	CG33110	Dmel_CG33110	NP_788716.1	337	uncharacterized protein Dmel_CG33110
3R	NT_033777.3	22580895	22581978	+	42661	CSN6	Dmel_CG6932	NP_524451.1	341	COP9 signalosome subunit 6
3R	NT_033777.3	22582205	22583120	-	42663	Dph5	Dmel_CG31289	NP_524452.4	281	diphthamide methyltransferase
3R	NT_033777.3	22583469	22584644	-	326256	CG33107	Dmel_CG33107	NP_788717.1	291	uncharacterized protein Dmel_CG33107
3R	NT_033777.3	22584863	22586063	+	42662	CG6937	Dmel_CG6937	NP_651066.2	356	CG6937
3R	NT_033777.3	22586149	22586625	-	42664	btn	Dmel_CG5264	NP_732768.1	158	buttonless
3R	NT_033777.3	22588281	22606894	+	42665	Efa6	Dmel_CG31158	NP_732769.3	1402	exchange factor for Arf 6, isoform G
3R	NT_033777.3	22588281	22607218	+	42665	Efa6	Dmel_CG31158	NP_001097874.1	1521	exchange factor for Arf 6, isoform D
3R	NT_033777.3	22588281	22607218	+	42665	Efa6	Dmel_CG31158	NP_001097873.1	1387	exchange factor for Arf 6, isoform C
3R	NT_033777.3	22588281	22607218	+	42665	Efa6	Dmel_CG31158	NP_001163691.2	1601	exchange factor for Arf 6, isoform H
3R	NT_033777.3	22588281	22605938	+	42665	Efa6	Dmel_CG31158	NP_788718.3	1554	exchange factor for Arf 6, isoform I
3R	NT_033777.3	22608860	22613500	-	42669	CG31156	Dmel_CG31156	NP_651070.3	948	uncharacterized protein Dmel_CG31156
3R	NT_033777.3	22609538	22610674	+	42668	CG13843	Dmel_CG13843	NP_651069.1	362	uncharacterized protein Dmel_CG13843
3R	NT_033777.3	22613764	22616442	+	42670	EF-G2	Dmel_CG31159	NP_732771.2	740	elongation factor G2, isoform A
3R	NT_033777.3	22613764	22615810	+	42670	EF-G2	Dmel_CG31159	NP_001287468.1	565	elongation factor G2, isoform B
3R	NT_033777.3	22616691	22618194	+	326123	CG31161	Dmel_CG31161	NP_732772.2	459	uncharacterized protein Dmel_CG31161
3R	NT_033777.3	22618570	22619722	+	42671	mRpL45	Dmel_CG6949	NP_651072.1	361	mitochondrial ribosomal protein L45
3R	NT_033777.3	22620293	22638939	-	42672	loco	Dmel_CG5248	NP_732773.1	1541	locomotion defects, isoform D
3R	NT_033777.3	22620293	22626289	-	42672	loco	Dmel_CG5248	NP_732776.1	829	locomotion defects, isoform C
3R	NT_033777.3	22620293	22622768	-	42672	loco	Dmel_CG5248	NP_001247241.1	782	locomotion defects, isoform F
3R	NT_033777.3	22620293	22635698	-	42672	loco	Dmel_CG5248	NP_001247240.1	846	locomotion defects, isoform H
3R	NT_033777.3	22620293	22630593	-	42672	loco	Dmel_CG5248	NP_732775.1	1175	locomotion defects, isoform B
3R	NT_033777.3	22652428	22681579	+	42676	wake	Dmel_CG45058	NP_001287469.1	1648	wide awake, isoform G
3R	NT_033777.3	22668035	22681579	+	42676	wake	Dmel_CG45058	NP_001247245.1	1417	wide awake, isoform E
3R	NT_033777.3	22668035	22681579	+	42676	wake	Dmel_CG45058	NP_001247244.1	1417	wide awake, isoform D
3R	NT_033777.3	22674169	22681579	+	42676	wake	Dmel_CG45058	NP_001247243.1	1553	wide awake, isoform C
3R	NT_033777.3	22675982	22681579	+	42676	wake	Dmel_CG45058	NP_001287470.1	1403	wide awake, isoform H
3R	NT_033777.3	22677136	22681579	+	42676	wake	Dmel_CG45058	NP_651076.2	1255	wide awake, isoform F
3R	NT_033777.3	22677136	22681579	+	42676	wake	Dmel_CG45058	NP_001189266.1	1255	wide awake, isoform B
3R	NT_033777.3	22685493	22686350	-	248194	Gclm	Dmel_CG4919	NP_732780.1	285	Glutamate-cysteine ligase modifier subunit, isoform A
3R	NT_033777.3	22685493	22686350	-	248194	Gclm	Dmel_CG4919	NP_001262845.1	285	Glutamate-cysteine ligase modifier subunit, isoform B
3R	NT_033777.3	22686904	22687332	+	42678	CG17625	Dmel_CG17625	NP_651078.1	142	uncharacterized protein Dmel_CG17625
3R	NT_033777.3	22687567	22690296	-	42679	wfs1	Dmel_CG4917	NP_651079.2	853	wolfram syndrome 1, isoform A
3R	NT_033777.3	22687567	22690296	-	42679	wfs1	Dmel_CG4917	NP_001189267.1	852	wolfram syndrome 1, isoform C
3R	NT_033777.3	22690700	22694726	+	42680	Nup133	Dmel_CG6958	NP_651080.2	1200	nucleoporin 133kD
3R	NT_033777.3	22695027	22697932	+	42681	cd	Dmel_CG6969	NP_651081.1	830	cardinal
3R	NT_033777.3	22698396	22700060	+	42682	Cyp6d4	Dmel_CG12800	NP_651082.1	515	Cyp6d4
3R	NT_033777.3	22700758	22701479	-	42683	CCAP	Dmel_CG4910	NP_001262846.1	155	crustacean cardioactive peptide, isoform B
3R	NT_033777.3	22700758	22701479	-	42683	CCAP	Dmel_CG4910	NP_651083.2	155	crustacean cardioactive peptide, isoform A
3R	NT_033777.3	22702926	22704212	+	42684	CG6972	Dmel_CG6972	NP_001303445.1	296	CG6972, isoform B
3R	NT_033777.3	22702926	22704212	+	42684	CG6972	Dmel_CG6972	NP_651084.1	295	CG6972, isoform A
3R	NT_033777.3	22704351	22707190	-	42685	CG13842	Dmel_CG13842	NP_651085.2	772	uncharacterized protein Dmel_CG13842
3R	NT_033777.3	22707906	22710723	-	42686	CG4907	Dmel_CG4907	NP_651086.1	919	CG4907
3R	NT_033777.3	22711716	22720523	-	42687	wge	Dmel_CG31151	NP_732791.2	1610	winged eye, isoform F
3R	NT_033777.3	22711716	22720523	-	42687	wge	Dmel_CG31151	NP_732790.3	1669	winged eye, isoform D
3R	NT_033777.3	22711716	22720523	-	42687	wge	Dmel_CG31151	NP_001262847.1	1660	winged eye, isoform E
3R	NT_033777.3	22711716	22720523	-	42687	wge	Dmel_CG31151	NP_001036746.1	1658	winged eye, isoform C
3R	NT_033777.3	22721430	22724524	-	42689	Irp-1A	Dmel_CG4900	NP_477371.1	902	iron regulatory protein 1A
3R	NT_033777.3	22725073	22726269	-	42690	CG4813	Dmel_CG4813	NP_651088.1	398	CG4813
3R	NT_033777.3	22727307	22730107	+	42691	CG45049	Dmel_CG45049	NP_001287471.1	273	uncharacterized protein Dmel_CG45049, isoform D
3R	NT_033777.3	22727307	22730107	+	42691	CG45049	Dmel_CG45049	NP_001287472.1	273	uncharacterized protein Dmel_CG45049, isoform E
3R	NT_033777.3	22729234	22730107	+	42691	CG45049	Dmel_CG45049	NP_001097877.1	203	uncharacterized protein Dmel_CG45049, isoform C
3R	NT_033777.3	22729234	22730107	+	42691	CG45049	Dmel_CG45049	NP_001097876.1	203	uncharacterized protein Dmel_CG45049, isoform B
3R	NT_033777.3	22729234	22730107	+	42691	CG45049	Dmel_CG45049	NP_001287473.1	203	uncharacterized protein Dmel_CG45049, isoform F
3R	NT_033777.3	22732412	22733825	-	42692	Takl2	Dmel_CG4803	NP_651090.2	281	Tak1-like 2
3R	NT_033777.3	22734109	22741030	-	42693	Dcr-1	Dmel_CG4792	NP_524453.1	2249	Dicer-1
3R	NT_033777.3	22741317	22742997	+	42694	CG6985	Dmel_CG6985	NP_651091.1	501	CG6985
3R	NT_033777.3	22743149	22745524	-	42695	vret	Dmel_CG4771	NP_651092.1	691	vreteno
3R	NT_033777.3	22745717	22746430	+	42696	HP1c	Dmel_CG6990	NP_651093.1	237	heterochromatin protein 1c
3R	NT_033777.3	22746500	22747526	-	42697	CG17141	Dmel_CG17141	NP_651094.2	323	uncharacterized protein Dmel_CG17141
3R	NT_033777.3	22747743	22748681	-	42698	CG31139	Dmel_CG31139	NP_001262848.1	312	uncharacterized protein Dmel_CG31139, isoform C
3R	NT_033777.3	22747743	22748991	-	42698	CG31139	Dmel_CG31139	NP_732797.1	397	uncharacterized protein Dmel_CG31139, isoform A
3R	NT_033777.3	22749239	22750524	-	326122	rumi	Dmel_CG31152	NP_651095.1	411	rumi, isoform A
3R	NT_033777.3	22749239	22750189	-	326122	rumi	Dmel_CG31152	NP_001262849.1	316	rumi, isoform B
3R	NT_033777.3	22758846	22761071	-	42699	CG4725	Dmel_CG4725	NP_651096.1	741	CG4725
3R	NT_033777.3	22761601	22763691	-	42700	CG4723	Dmel_CG4723	NP_651097.1	696	CG4723
3R	NT_033777.3	22764042	22766102	-	42701	CG4721	Dmel_CG4721	NP_651098.2	686	CG4721
3R	NT_033777.3	22767170	22767665	-	50061	CG13841	Dmel_CG13841	NP_652241.1	120	uncharacterized protein Dmel_CG13841, isoform A
3R	NT_033777.3	22767170	22767665	-	50061	CG13841	Dmel_CG13841	NP_001303483.1	120	uncharacterized protein Dmel_CG13841, isoform B
3R	NT_033777.3	22768242	22768713	-	12798514	CG43091	Dmel_CG43091	NP_001247246.1	135	uncharacterized protein Dmel_CG43091
3R	NT_033777.3	22768945	22769662	-	12798515	CG43092	Dmel_CG43092	NP_001247247.1	225	uncharacterized protein Dmel_CG43092
3R	NT_033777.3	22769882	22770304	-	12798516	CG43093	Dmel_CG43093	NP_001247248.1	121	uncharacterized protein Dmel_CG43093
3R	NT_033777.3	22770635	22770972	-	12798517	CG43094	Dmel_CG43094	NP_001247249.1	90	uncharacterized protein Dmel_CG43094
3R	NT_033777.3	22771269	22771770	-	12798518	CG43095	Dmel_CG43095	NP_001247250.1	146	uncharacterized protein Dmel_CG43095
3R	NT_033777.3	22774954	22776228	+	42702	Usp12-46	Dmel_CG7023	NP_651099.1	424	Ubiquitin-specific protease 12/46
3R	NT_033777.3	22784763	22792679	+	42703	CG7029	Dmel_CG7029	NP_788719.1	1744	CG7029, isoform A
3R	NT_033777.3	22784763	22792679	+	42703	CG7029	Dmel_CG7029	NP_001262851.1	1694	CG7029, isoform F
3R	NT_033777.3	22787026	22792679	+	42703	CG7029	Dmel_CG7029	NP_001097881.1	1517	CG7029, isoform D
3R	NT_033777.3	22787026	22792679	+	42703	CG7029	Dmel_CG7029	NP_001262853.1	1506	CG7029, isoform I
3R	NT_033777.3	22787026	22792679	+	42703	CG7029	Dmel_CG7029	NP_001097880.1	1517	CG7029, isoform C
3R	NT_033777.3	22787026	22792679	+	42703	CG7029	Dmel_CG7029	NP_001262852.1	1471	CG7029, isoform G
3R	NT_033777.3	22804356	22806186	+	42704	CG7031	Dmel_CG7031	NP_001287474.1	475	CG7031, isoform B
3R	NT_033777.3	22804356	22806186	+	42704	CG7031	Dmel_CG7031	NP_001287475.1	474	CG7031, isoform C
3R	NT_033777.3	22804356	22806186	+	42704	CG7031	Dmel_CG7031	NP_651101.1	475	CG7031, isoform A
3R	NT_033777.3	22814637	22816037	-	42705	CG13840	Dmel_CG13840	NP_651102.3	466	uncharacterized protein Dmel_CG13840
3R	NT_033777.3	22844192	22845312	-	42706	CG4704	Dmel_CG4704	NP_651103.1	354	CG4704, isoform A
3R	NT_033777.3	22844192	22845312	-	42706	CG4704	Dmel_CG4704	NP_001287476.1	354	CG4704, isoform B
3R	NT_033777.3	22915408	22960101	+	42707	klg	Dmel_CG6669	NP_524454.2	545	klingon
3R	NT_033777.3	22923471	22924351	+	42708	CG6660	Dmel_CG6660	NP_651104.1	272	CG6660
3R	NT_033777.3	22966387	22966949	+	318658	Tpl94D	Dmel_CG31281	NP_001262854.1	163	transition protein-like 94D, isoform B
3R	NT_033777.3	22966387	22966949	+	318658	Tpl94D	Dmel_CG31281	NP_732806.1	164	transition protein-like 94D, isoform A
3R	NT_033777.3	22977308	22977787	+	42709	Gbp3	Dmel_CG17244	NP_651105.1	159	Growth-blocking peptide 3, isoform A
3R	NT_033777.3	22977308	22977787	+	42709	Gbp3	Dmel_CG17244	NP_001287477.1	159	Growth-blocking peptide 3, isoform B
3R	NT_033777.3	22981591	22991447	-	42710	Nha2	Dmel_CG43442	NP_732807.1	584	N
3R	NT_033777.3	22981591	22998180	-	42710	Nha2	Dmel_CG43442	NP_001247251.1	714	N
3R	NT_033777.3	22987281	22988503	+	42711	Or94a	Dmel_CG17241	NP_524455.1	387	odorant receptor 94a
3R	NT_033777.3	22989295	22990568	+	42712	Or94b	Dmel_CG6679	NP_524456.1	383	odorant receptor 94b
3R	NT_033777.3	23000452	23008316	-	42715	CG34375	Dmel_CG34375	NP_001163693.1	568	uncharacterized protein Dmel_CG34375, isoform B
3R	NT_033777.3	23000452	23008316	-	42715	CG34375	Dmel_CG34375	NP_651109.3	567	uncharacterized protein Dmel_CG34375, isoform A
3R	NT_033777.3	23000452	23008316	-	42715	CG34375	Dmel_CG34375	NP_001262855.1	568	uncharacterized protein Dmel_CG34375, isoform C
3R	NT_033777.3	23012514	23015074	+	42716	CG6688	Dmel_CG6688	NP_651110.1	424	CG6688
3R	NT_033777.3	23021556	23024421	-	42717	lmd	Dmel_CG4677	NP_001262856.1	365	lame duck, isoform C
3R	NT_033777.3	23021556	23026451	-	42717	lmd	Dmel_CG4677	NP_732811.1	866	lame duck, isoform B
3R	NT_033777.3	23033338	23035507	-	42718	CG13833	Dmel_CG13833	NP_651111.1	321	uncharacterized protein Dmel_CG13833
3R	NT_033777.3	23042333	23042608	+	42719	CG13838	Dmel_CG13838	NP_651112.1	91	uncharacterized protein Dmel_CG13838
3R	NT_033777.3	23043990	23044661	+	42720	CG13837	Dmel_CG13837	NP_651113.1	223	uncharacterized protein Dmel_CG13837
3R	NT_033777.3	23044817	23048020	-	42721	CG17121	Dmel_CG17121	NP_651114.1	361	uncharacterized protein Dmel_CG17121
3R	NT_033777.3	23049965	23051219	-	2768677	p53	Dmel_CG33336	NP_001247252.2	334	p53, isoform E
3R	NT_033777.3	23049965	23053394	-	2768677	p53	Dmel_CG33336	NP_001163694.1	385	p53, isoform C
3R	NT_033777.3	23049965	23054008	-	2768677	p53	Dmel_CG33336	NP_996267.1	495	p53, isoform B
3R	NT_033777.3	23049965	23053394	-	2768677	p53	Dmel_CG33336	NP_996268.1	385	p53, isoform A
3R	NT_033777.3	23051689	23052903	+	117339	Gr94a	Dmel_CG31280	NP_732816.1	404	gustatory receptor 94a
3R	NT_033777.3	23054523	23056253	-	42723	CG17119	Dmel_CG17119	NP_651116.1	397	uncharacterized protein Dmel_CG17119, isoform A
3R	NT_033777.3	23054523	23056253	-	42723	CG17119	Dmel_CG17119	NP_788720.2	397	uncharacterized protein Dmel_CG17119, isoform C
3R	NT_033777.3	23058896	23061183	-	252554	sav	Dmel_CG33193	NP_001189269.1	603	salvador, isoform B
3R	NT_033777.3	23058896	23061183	-	252554	sav	Dmel_CG33193	NP_788721.1	608	salvador, isoform A
3R	NT_033777.3	23061660	23062679	+	42726	Ublcp1	Dmel_CG6697	NP_651118.1	320	Ubiquitin-like domain-containing C-terminal domain phosphatase 1
3R	NT_033777.3	23062775	23066741	-	42727	CG17111	Dmel_CG17111	NP_651119.2	792	uncharacterized protein Dmel_CG17111
3R	NT_033777.3	23072622	23112344	-	42733	Cow	Dmel_CG13830	NP_001163695.1	629	carrier of wingless, isoform C
3R	NT_033777.3	23072622	23112344	-	42733	Cow	Dmel_CG13830	NP_001097883.2	629	carrier of wingless, isoform D
3R	NT_033777.3	23072622	23112344	-	42733	Cow	Dmel_CG13830	NP_001262857.1	632	carrier of wingless, isoform E
3R	NT_033777.3	23091871	23093286	+	42728	CG6726	Dmel_CG6726	NP_732822.1	401	CG6726, isoform B
3R	NT_033777.3	23091871	23093286	+	42728	CG6726	Dmel_CG6726	NP_651120.1	401	CG6726, isoform A
3R	NT_033777.3	23091871	23093286	+	42728	CG6726	Dmel_CG6726	NP_001287478.1	401	CG6726, isoform C
3R	NT_033777.3	23093679	23095054	+	42728	CG6726	Dmel_CG6726	NP_001262858.1	402	uncharacterized protein Dmel_CG17110, isoform B
3R	NT_033777.3	23093679	23095054	+	42728	CG6726	Dmel_CG6726	NP_001287479.1	402	uncharacterized protein Dmel_CG17110, isoform C
3R	NT_033777.3	23093679	23095054	+	42728	CG6726	Dmel_CG6726	NP_651121.1	402	uncharacterized protein Dmel_CG17110, isoform A
3R	NT_033777.3	23095733	23097113	+	42730	CG17109	Dmel_CG17109	NP_001262859.1	400	uncharacterized protein Dmel_CG17109, isoform B
3R	NT_033777.3	23095733	23097113	+	42730	CG17109	Dmel_CG17109	NP_651122.2	400	uncharacterized protein Dmel_CG17109, isoform A
3R	NT_033777.3	23097759	23099137	+	42731	CG6733	Dmel_CG6733	NP_651123.1	401	CG6733
3R	NT_033777.3	23099574	23100939	+	42732	CG6738	Dmel_CG6738	NP_651124.1	401	CG6738
3R	NT_033777.3	23114673	23117538	-	42734	Rassf	Dmel_CG4656	NP_651126.3	806	Ras association family member
3R	NT_033777.3	23118789	23123629	+	42735	CenB1A	Dmel_CG6742	NP_524458.1	828	centaurin beta 1A, isoform A
3R	NT_033777.3	23121475	23123629	+	42735	CenB1A	Dmel_CG6742	NP_732826.2	598	centaurin beta 1A, isoform B
3R	NT_033777.3	23124297	23126342	-	42736	CG31365	Dmel_CG31365	NP_732827.1	639	uncharacterized protein Dmel_CG31365
3R	NT_033777.3	23126708	23127780	-	326142	CG31457	Dmel_CG31457	NP_732828.1	337	uncharacterized protein Dmel_CG31457
3R	NT_033777.3	23128738	23141521	-	42737	hh	Dmel_CG4637	NP_001034065.1	471	hedgehog
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_788722.1	599	unkempt, isoform A
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_001247254.1	672	unkempt, isoform D
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_001247253.1	599	unkempt, isoform C
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_001262860.1	600	unkempt, isoform F
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_001247255.1	599	unkempt, isoform E
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_788723.1	599	unkempt, isoform B
3R	NT_033777.3	23153940	23157843	-	42738	unk	Dmel_CG4620	NP_001303430.1	673	unkempt, isoform G
3R	NT_033777.3	23158120	23159239	-	42739	VhaAC39-2	Dmel_CG4624	NP_651128.1	350	vacuolar 
3R	NT_033777.3	23160631	23161318	-	42740	CG13829	Dmel_CG13829	NP_651129.1	211	uncharacterized protein Dmel_CG13829
3R	NT_033777.3	23170095	23184959	+	42742	Irk1	Dmel_CG44159	NP_001262861.1	652	inwardly rectifying potassium channel 1, isoform F
3R	NT_033777.3	23170095	23184959	+	42742	Irk1	Dmel_CG44159	NP_001262862.1	652	inwardly rectifying potassium channel 1, isoform G
3R	NT_033777.3	23174148	23174219	+	30522399	CG46310	Dmel_CG46310	NP_001334697.1	23	uncharacterized protein Dmel_CG46310
3R	NT_033777.3	23174769	23184959	+	30522399	CG46310	Dmel_CG46310	NP_001189270.1	540	inwardly rectifying potassium channel 1, isoform E
3R	NT_033777.3	23179079	23184959	+	30522399	CG46310	Dmel_CG46310	NP_001097884.1	555	inwardly rectifying potassium channel 1, isoform B
3R	NT_033777.3	23182297	23184959	+	30522399	CG46310	Dmel_CG46310	NP_001163697.1	526	inwardly rectifying potassium channel 1, isoform C
3R	NT_033777.3	23182297	23184959	+	30522399	CG46310	Dmel_CG46310	NP_001262863.1	526	inwardly rectifying potassium channel 1, isoform H
3R	NT_033777.3	23182920	23184959	+	30522399	CG46310	Dmel_CG46310	NP_651131.2	532	inwardly rectifying potassium channel 1, isoform D
3R	NT_033777.3	23187303	23218907	-	42743	cnc	Dmel_CG43286	NP_001262864.1	1430	cap-n-collar, isoform O
3R	NT_033777.3	23187444	23197562	-	42743	cnc	Dmel_CG43286	NP_732834.1	805	cap-n-collar, isoform B
3R	NT_033777.3	23187444	23223075	-	42743	cnc	Dmel_CG43286	NP_001247262.1	1133	cap-n-collar, isoform N
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_732837.1	533	cap-n-collar, isoform E
3R	NT_033777.3	23187444	23218907	-	42743	cnc	Dmel_CG43286	NP_732833.1	1383	cap-n-collar, isoform C
3R	NT_033777.3	23187444	23218907	-	42743	cnc	Dmel_CG43286	NP_001247259.1	1383	cap-n-collar, isoform J
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_001247256.1	533	cap-n-collar, isoform F
3R	NT_033777.3	23187444	23192275	-	42743	cnc	Dmel_CG43286	NP_001262865.1	711	cap-n-collar, isoform P
3R	NT_033777.3	23187444	23218907	-	42743	cnc	Dmel_CG43286	NP_001247260.1	1383	cap-n-collar, isoform K
3R	NT_033777.3	23187444	23223075	-	42743	cnc	Dmel_CG43286	NP_001247261.1	1133	cap-n-collar, isoform M
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_732839.1	533	cap-n-collar, isoform G
3R	NT_033777.3	23187444	23214443	-	42743	cnc	Dmel_CG43286	NP_732838.2	1046	cap-n-collar, isoform L
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_732836.1	533	cap-n-collar, isoform D
3R	NT_033777.3	23187444	23223075	-	42743	cnc	Dmel_CG43286	NP_001247258.1	1133	cap-n-collar, isoform I
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_732835.1	533	cap-n-collar, isoform A
3R	NT_033777.3	23187444	23189118	-	42743	cnc	Dmel_CG43286	NP_001247257.1	533	cap-n-collar, isoform H
3R	NT_033777.3	23201805	23203961	-	42745	fzo	Dmel_CG4568	NP_732840.1	718	fuzzy onions
3R	NT_033777.3	23230452	23245408	-	42747	CG4467	Dmel_CG4467	NP_001036747.1	1125	CG4467, isoform B
3R	NT_033777.3	23230452	23237200	-	42747	CG4467	Dmel_CG4467	NP_651133.2	1088	CG4467, isoform A
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_001262866.1	422	Rad60, isoform C
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_001163698.1	422	Rad60, isoform B
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_651134.1	424	Rad60, isoform A
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_001262869.1	421	Rad60, isoform F
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_001262868.1	423	Rad60, isoform E
3R	NT_033777.3	23249592	23251224	-	42748	Rad60	Dmel_CG4449	NP_001262867.1	424	Rad60, isoform D
3R	NT_033777.3	23251877	23254448	+	42749	EloA	Dmel_CG6755	NP_732846.1	643	elongin A, isoform A
3R	NT_033777.3	23252399	23254448	+	42749	EloA	Dmel_CG6755	NP_651135.1	566	elongin A, isoform B
3R	NT_033777.3	23255494	23257999	-	42750	wda	Dmel_CG4448	NP_651136.1	743	will decrease acetylation
3R	NT_033777.3	23258478	23260428	+	42751	CG13827	Dmel_CG13827	NP_651137.3	233	uncharacterized protein Dmel_CG13827, isoform A
3R	NT_033777.3	23258910	23260428	+	42751	CG13827	Dmel_CG13827	NP_001247263.1	234	uncharacterized protein Dmel_CG13827, isoform B
3R	NT_033777.3	23265853	23269982	-	42752	orb	Dmel_CG10868	NP_732849.2	913	oo18 RNA-binding protein, isoform D
3R	NT_033777.3	23265853	23279076	-	42752	orb	Dmel_CG10868	NP_001262870.1	915	oo18 RNA-binding protein, isoform G
3R	NT_033777.3	23265853	23269982	-	42752	orb	Dmel_CG10868	NP_732848.1	913	oo18 RNA-binding protein, isoform B
3R	NT_033777.3	23265853	23279076	-	42752	orb	Dmel_CG10868	NP_524460.2	915	oo18 RNA-binding protein, isoform A
3R	NT_033777.3	23265853	23267841	-	42752	orb	Dmel_CG10868	NP_732851.2	559	oo18 RNA-binding protein, isoform E
3R	NT_033777.3	23265853	23268257	-	42752	orb	Dmel_CG10868	NP_001163699.1	617	oo18 RNA-binding protein, isoform F
3R	NT_033777.3	23265853	23267841	-	42752	orb	Dmel_CG10868	NP_732850.1	559	oo18 RNA-binding protein, isoform C
3R	NT_033777.3	23281291	23283755	+	42753	Cdc16	Dmel_CG6759	NP_477397.1	718	cell division cycle 16
3R	NT_033777.3	23284774	23285904	+	42754	CG6763	Dmel_CG6763	NP_001262871.1	354	CG6763, isoform B
3R	NT_033777.3	23284774	23285904	+	42754	CG6763	Dmel_CG6763	NP_651138.1	354	CG6763, isoform A
3R	NT_033777.3	23286240	23287892	-	42755	CG17083	Dmel_CG17083	NP_651139.1	550	uncharacterized protein Dmel_CG17083
3R	NT_033777.3	23288313	23290098	-	42756	CG4434	Dmel_CG4434	NP_651140.1	535	CG4434
3R	NT_033777.3	23291365	23313842	-	42757	pnt	Dmel_CG17077	NP_732857.1	636	pointed, isoform D
3R	NT_033777.3	23291365	23294535	-	42757	pnt	Dmel_CG17077	NP_001262872.1	625	pointed, isoform E
3R	NT_033777.3	23291365	23294535	-	42757	pnt	Dmel_CG17077	NP_732858.1	623	pointed, isoform C
3R	NT_033777.3	23291365	23340514	-	42757	pnt	Dmel_CG17077	NP_524461.2	718	pointed, isoform B
3R	NT_033777.3	23348191	23355088	+	42758	DNApol-epsilon255	Dmel_CG6768	NP_524462.2	2236	DNA polymerase epsilon 255kD subunit
3R	NT_033777.3	23355401	23355785	-	42759	ATPsynCF6	Dmel_CG4412	NP_477194.1	106	ATP synthase, coupling factor 6, isoform A
3R	NT_033777.3	23355401	23355785	-	42759	ATPsynCF6	Dmel_CG4412	NP_001262873.1	106	ATP synthase, coupling factor 6, isoform C
3R	NT_033777.3	23355401	23355785	-	42759	ATPsynCF6	Dmel_CG4412	NP_001247264.1	106	ATP synthase, coupling factor 6, isoform B
3R	NT_033777.3	23356666	23358181	+	44437	Sec13	Dmel_CG6773	NP_651977.1	356	secretory 13, isoform A
3R	NT_033777.3	23356666	23358181	+	44437	Sec13	Dmel_CG6773	NP_001287480.1	356	secretory 13, isoform B
3R	NT_033777.3	23358855	23359858	+	42761	RpS3	Dmel_CG6779	NP_476632.1	246	ribosomal protein S3, isoform A
3R	NT_033777.3	23358855	23359858	+	42761	RpS3	Dmel_CG6779	NP_001287481.1	246	ribosomal protein S3, isoform B
3R	NT_033777.3	23362135	23363538	-	42762	CG4408	Dmel_CG4408	NP_001287482.1	467	CG4408, isoform B
3R	NT_033777.3	23362135	23363574	-	42762	CG4408	Dmel_CG4408	NP_651141.2	479	CG4408, isoform A
3R	NT_033777.3	23373120	23373536	+	42763	CG42827	Dmel_CG42827	NP_732863.2	116	uncharacterized protein Dmel_CG42827, isoform C
3R	NT_033777.3	23373120	23373536	+	42763	CG42827	Dmel_CG42827	NP_651142.3	116	uncharacterized protein Dmel_CG42827, isoform D
3R	NT_033777.3	23373703	23374044	+	10178934	CG42828	Dmel_CG42828	NP_001189271.1	89	uncharacterized protein Dmel_CG42828
3R	NT_033777.3	23377589	23382533	-	42764	CG4393	Dmel_CG4393	NP_001287484.1	1325	CG4393, isoform D
3R	NT_033777.3	23377589	23382533	-	42764	CG4393	Dmel_CG4393	NP_651143.2	1325	CG4393, isoform B
3R	NT_033777.3	23377589	23382533	-	42764	CG4393	Dmel_CG4393	NP_001287483.1	1325	CG4393, isoform C
3R	NT_033777.3	23388425	23388871	-	326147	CG31515	Dmel_CG31515	NP_732865.2	129	uncharacterized protein Dmel_CG31515
3R	NT_033777.3	23402808	23405139	+	7354412	Ir94d	Dmel_CG42297	NP_001138099.1	593	ionotropic receptor 94d
3R	NT_033777.3	23403271	23403683	-	42766	CG17380	Dmel_CG17380	NP_651145.2	119	uncharacterized protein Dmel_CG17380
3R	NT_033777.3	23405509	23407402	+	42765	Ir94e	Dmel_CG42298	NP_001097885.2	611	ionotropic receptor 94e
3R	NT_033777.3	23410158	23412607	-	42767	CG4374	Dmel_CG4374	NP_651146.2	772	CG4374, isoform B
3R	NT_033777.3	23410158	23412607	-	42767	CG4374	Dmel_CG4374	NP_001262874.1	772	CG4374, isoform C
3R	NT_033777.3	23425755	23425883	-	14462512	CG43694	Dmel_CG43694	NP_001262875.1	42	uncharacterized protein Dmel_CG43694
3R	NT_033777.3	23481865	23483541	+	318632	Ir94f	Dmel_CG31225	NP_732868.2	558	ionotropic receptor 94f
3R	NT_033777.3	23483863	23485500	+	42768	Ir94g	Dmel_CG17381	NP_651147.2	545	ionotropic receptor 94g
3R	NT_033777.3	23487501	23489180	+	42769	Ir94h	Dmel_CG17382	NP_651148.2	559	ionotropic receptor 94h
3R	NT_033777.3	23506981	23507289	-	5740640	CG34289	Dmel_CG34289	NP_001138100.1	102	uncharacterized protein Dmel_CG34289, isoform B
3R	NT_033777.3	23506981	23507395	-	5740640	CG34289	Dmel_CG34289	NP_001247265.1	114	uncharacterized protein Dmel_CG34289, isoform C
3R	NT_033777.3	23514048	23518269	-	42770	Irk2	Dmel_CG4370	NP_001163700.1	451	inwardly rectifying potassium channel 2, isoform C
3R	NT_033777.3	23514268	23518705	-	42770	Irk2	Dmel_CG4370	NP_651149.2	453	inwardly rectifying potassium channel 2, isoform A
3R	NT_033777.3	23514268	23518269	-	42770	Irk2	Dmel_CG4370	NP_732871.1	437	inwardly rectifying potassium channel 2, isoform B
3R	NT_033777.3	23514268	23518705	-	42770	Irk2	Dmel_CG4370	NP_001287485.1	454	inwardly rectifying potassium channel 2, isoform D
3R	NT_033777.3	23520208	23521443	-	42772	CG10177	Dmel_CG10177	NP_651150.1	411	uncharacterized protein Dmel_CG10177
3R	NT_033777.3	23523075	23524887	-	42773	CG10175	Dmel_CG10175	NP_732875.1	524	uncharacterized protein Dmel_CG10175, isoform B
3R	NT_033777.3	23523075	23528828	-	42773	CG10175	Dmel_CG10175	NP_001287486.1	644	uncharacterized protein Dmel_CG10175, isoform E
3R	NT_033777.3	23523075	23527175	-	42773	CG10175	Dmel_CG10175	NP_001287487.1	707	uncharacterized protein Dmel_CG10175, isoform D
3R	NT_033777.3	23523075	23528873	-	42773	CG10175	Dmel_CG10175	NP_651151.1	659	uncharacterized protein Dmel_CG10175, isoform C
3R	NT_033777.3	23523075	23528828	-	42773	CG10175	Dmel_CG10175	NP_732874.1	644	uncharacterized protein Dmel_CG10175, isoform A
3R	NT_033777.3	23533045	23534723	-	42774	CG10170	Dmel_CG10170	NP_651152.1	539	uncharacterized protein Dmel_CG10170
3R	NT_033777.3	23535073	23536685	-	42775	CG16732	Dmel_CG16732	NP_651153.1	519	uncharacterized protein Dmel_CG16732, isoform A
3R	NT_033777.3	23535073	23536685	-	42775	CG16732	Dmel_CG16732	NP_001189272.1	516	uncharacterized protein Dmel_CG16732, isoform B
3R	NT_033777.3	23537039	23538721	-	42776	CG10168	Dmel_CG10168	NP_651154.1	540	uncharacterized protein Dmel_CG10168
3R	NT_033777.3	23554847	23556007	-	42777	CG10164	Dmel_CG10164	NP_651155.1	386	uncharacterized protein Dmel_CG10164, isoform A
3R	NT_033777.3	23554847	23556007	-	42777	CG10164	Dmel_CG10164	NP_001163701.1	386	uncharacterized protein Dmel_CG10164, isoform B
3R	NT_033777.3	23567898	23578985	+	42778	beat-IV	Dmel_CG10152	NP_001262876.1	446	beat-IV, isoform B
3R	NT_033777.3	23567898	23578806	+	42778	beat-IV	Dmel_CG10152	NP_651156.1	413	beat-IV, isoform A
3R	NT_033777.3	23587207	23589794	-	42780	CG10182	Dmel_CG10182	NP_651158.1	699	uncharacterized protein Dmel_CG10182
3R	NT_033777.3	23590141	23592769	-	2768678	CG33337	Dmel_CG33337	NP_996269.2	708	uncharacterized protein Dmel_CG33337
3R	NT_033777.3	23593625	23596273	-	42781	CG16723	Dmel_CG16723	NP_651159.3	695	uncharacterized protein Dmel_CG16723
3R	NT_033777.3	23596561	23599034	-	42782	CG10183	Dmel_CG10183	NP_651160.3	685	uncharacterized protein Dmel_CG10183
3R	NT_033777.3	23602599	23605024	-	42783	CG10184	Dmel_CG10184	NP_651161.1	383	uncharacterized protein Dmel_CG10184
3R	NT_033777.3	23606851	23626829	-	42784	CG31145	Dmel_CG31145	NP_001138103.2	528	uncharacterized protein Dmel_CG31145, isoform F
3R	NT_033777.3	23606851	23632528	-	42784	CG31145	Dmel_CG31145	NP_001138101.1	980	uncharacterized protein Dmel_CG31145, isoform C
3R	NT_033777.3	23606851	23626829	-	42784	CG31145	Dmel_CG31145	NP_788724.1	528	uncharacterized protein Dmel_CG31145, isoform B
3R	NT_033777.3	23606851	23626829	-	42784	CG31145	Dmel_CG31145	NP_732884.2	528	uncharacterized protein Dmel_CG31145, isoform A
3R	NT_033777.3	23607521	23632528	-	42784	CG31145	Dmel_CG31145	NP_001138102.1	915	uncharacterized protein Dmel_CG31145, isoform D
3R	NT_033777.3	23677410	23678351	+	42787	GILT3	Dmel_CG13822	NP_651165.1	216	Gamma-interferon-inducible lysosomal thiol reductase 3
3R	NT_033777.3	23678968	23679840	+	42788	GILT2	Dmel_CG10157	NP_651166.1	207	Gamma-interferon-inducible lysosomal thiol reductase 2
3R	NT_033777.3	23680191	23682140	+	42789	eIF-3p66	Dmel_CG10161	NP_524463.2	560	eukaryotic initiation factor 3 p66 subunit
3R	NT_033777.3	23682503	23683884	+	42790	CG16710	Dmel_CG16710	NP_651167.3	372	uncharacterized protein Dmel_CG16710
3R	NT_033777.3	23684057	23685876	+	59145	CG18754	Dmel_CG18754	NP_652652.3	341	uncharacterized protein Dmel_CG18754, isoform B
3R	NT_033777.3	23684446	23685876	+	59145	CG18754	Dmel_CG18754	NP_001262877.1	296	uncharacterized protein Dmel_CG18754, isoform C
3R	NT_033777.3	23686286	23688114	+	42791	SPE	Dmel_CG16705	NP_651168.1	400	Spatzle-Processing enzyme
3R	NT_033777.3	23689529	23694448	-	42793	CG10254	Dmel_CG10254	NP_732888.1	1398	uncharacterized protein Dmel_CG10254, isoform B
3R	NT_033777.3	23689529	23694448	-	42793	CG10254	Dmel_CG10254	NP_651170.1	1398	uncharacterized protein Dmel_CG10254, isoform A
3R	NT_033777.3	23689529	23694448	-	42793	CG10254	Dmel_CG10254	NP_001262878.1	1379	uncharacterized protein Dmel_CG10254, isoform C
3R	NT_033777.3	23695281	23696162	-	42794	CG10252	Dmel_CG10252	NP_651171.1	229	uncharacterized protein Dmel_CG10252
3R	NT_033777.3	23696593	23698880	-	117368	prt	Dmel_CG10251	NP_001097887.1	602	portabella
3R	NT_033777.3	23699899	23700201	-	251937	CG31468	Dmel_CG31468	NP_001262879.1	80	uncharacterized protein Dmel_CG31468, isoform B
3R	NT_033777.3	23699899	23700201	-	251937	CG31468	Dmel_CG31468	NP_732890.1	80	uncharacterized protein Dmel_CG31468, isoform A
3R	NT_033777.3	23700655	23702548	+	42796	Gba1a	Dmel_CG31148	NP_651172.1	561	glucocerebrosidase 1a
3R	NT_033777.3	23702790	23704475	+	318720	CG31413	Dmel_CG31413	NP_732891.1	561	uncharacterized protein Dmel_CG31413
3R	NT_033777.3	23704837	23707911	+	318721	Gba1b	Dmel_CG31414	NP_001097888.1	566	glucocerebrosidase 1b, isoform B
3R	NT_033777.3	23704837	23707911	+	318721	Gba1b	Dmel_CG31414	NP_001262880.1	566	glucocerebrosidase 1b, isoform C
3R	NT_033777.3	23710158	23711259	+	42797	CG10301	Dmel_CG10301	NP_651173.2	306	uncharacterized protein Dmel_CG10301
3R	NT_033777.3	23711558	23712796	+	42798	CG10300	Dmel_CG10300	NP_651174.2	311	uncharacterized protein Dmel_CG10300
3R	NT_033777.3	23712946	23717956	-	42799	nau	Dmel_CG10250	NP_476650.1	332	nautilus, isoform A
3R	NT_033777.3	23712946	23717956	-	42799	nau	Dmel_CG10250	NP_001163702.1	328	nautilus, isoform B
3R	NT_033777.3	23719476	23721424	-	42800	CG10232	Dmel_CG10232	NP_651175.4	509	uncharacterized protein Dmel_CG10232
3R	NT_033777.3	23728857	23731230	+	42801	CG10365	Dmel_CG10365	NP_996270.1	284	uncharacterized protein Dmel_CG10365, isoform D
3R	NT_033777.3	23728857	23731230	+	42801	CG10365	Dmel_CG10365	NP_732897.1	284	uncharacterized protein Dmel_CG10365, isoform C
3R	NT_033777.3	23728857	23731230	+	42801	CG10365	Dmel_CG10365	NP_732896.1	284	uncharacterized protein Dmel_CG10365, isoform B
3R	NT_033777.3	23728857	23731230	+	42801	CG10365	Dmel_CG10365	NP_651176.1	284	uncharacterized protein Dmel_CG10365, isoform A
3R	NT_033777.3	23731588	23732905	-	42802	Rpn9	Dmel_CG10230	NP_732899.1	382	regulatory particle non-ATPase 9, isoform B
3R	NT_033777.3	23731588	23732905	-	42802	Rpn9	Dmel_CG10230	NP_651177.1	382	regulatory particle non-ATPase 9, isoform A
3R	NT_033777.3	23747144	23750499	+	42803	Hmgcr	Dmel_CG10367	NP_732900.1	920	HMG coenzyme A reductase
3R	NT_033777.3	23751242	23752719	-	42804	RanBP3	Dmel_CG10225	NP_001262881.1	448	Ran binding protein 3, isoform B
3R	NT_033777.3	23751242	23752719	-	42804	RanBP3	Dmel_CG10225	NP_651178.1	449	Ran binding protein 3, isoform A
3R	NT_033777.3	23753014	23754421	+	42805	Rpt5	Dmel_CG10370	NP_524464.1	428	regulatory particle triple-A ATPase 5
3R	NT_033777.3	23754806	23757638	-	42806	Hrd3	Dmel_CG10221	NP_001262882.1	819	HMG-coA reductase degradation 3, isoform B
3R	NT_033777.3	23754806	23757638	-	42806	Hrd3	Dmel_CG10221	NP_651179.1	819	HMG-coA reductase degradation 3, isoform A
3R	NT_033777.3	23758517	23759486	+	42807	PTPMT1	Dmel_CG10371	NP_651180.3	200	protein tyrosine phosphatase, mitochondrial 1, isoform B
3R	NT_033777.3	23758781	23759486	+	42807	PTPMT1	Dmel_CG10371	NP_732901.1	194	protein tyrosine phosphatase, mitochondrial 1, isoform A
3R	NT_033777.3	23759722	23760494	-	42808	SdhD	Dmel_CG10219	NP_651181.1	182	succinate dehydrogenase, subunit D
3R	NT_033777.3	23760981	23763105	-	42809	CG10217	Dmel_CG10217	NP_651182.2	619	uncharacterized protein Dmel_CG10217, isoform A
3R	NT_033777.3	23760981	23763105	-	42809	CG10217	Dmel_CG10217	NP_732903.2	619	uncharacterized protein Dmel_CG10217, isoform B
3R	NT_033777.3	23764313	23766523	+	42810	Lsd-1	Dmel_CG10374	NP_001262883.1	405	lipid storage droplet-1, isoform D
3R	NT_033777.3	23764313	23766523	+	42810	Lsd-1	Dmel_CG10374	NP_651183.3	405	lipid storage droplet-1, isoform C
3R	NT_033777.3	23764313	23766523	+	42810	Lsd-1	Dmel_CG10374	NP_732904.2	431	lipid storage droplet-1, isoform A
3R	NT_033777.3	23764622	23766523	+	42810	Lsd-1	Dmel_CG10374	NP_732905.2	325	lipid storage droplet-1, isoform B
3R	NT_033777.3	23766763	23767398	-	42811	CG10214	Dmel_CG10214	NP_651184.1	211	uncharacterized protein Dmel_CG10214
3R	NT_033777.3	23767802	23768831	+	42812	CG10375	Dmel_CG10375	NP_651185.1	254	uncharacterized protein Dmel_CG10375, isoform A
3R	NT_033777.3	23768222	23768831	+	42812	CG10375	Dmel_CG10375	NP_001163704.1	160	uncharacterized protein Dmel_CG10375, isoform B
3R	NT_033777.3	23769040	23772762	-	42813	tst	Dmel_CG10210	NP_524465.1	1197	twister, isoform A
3R	NT_033777.3	23769040	23772762	-	42813	tst	Dmel_CG10210	NP_001262884.1	1197	twister, isoform B
3R	NT_033777.3	23773136	23774032	-	42814	CG10208	Dmel_CG10208	NP_651186.1	276	uncharacterized protein Dmel_CG10208
3R	NT_033777.3	23774509	23781164	-	42816	Nup98-96	Dmel_CG10198	NP_651187.2	1960	nucleoporin 98-96kD, isoform A
3R	NT_033777.3	23774509	23781164	-	42816	Nup98-96	Dmel_CG10198	NP_001262885.1	1960	nucleoporin 98-96kD, isoform D
3R	NT_033777.3	23777418	23781164	-	42816	Nup98-96	Dmel_CG10198	NP_001247266.1	1179	nucleoporin 98-96kD, isoform C
3R	NT_033777.3	23782340	23800771	+	42817	mbc	Dmel_CG10379	NP_477144.1	1970	myoblast city, isoform A
3R	NT_033777.3	23782340	23800771	+	42817	mbc	Dmel_CG10379	NP_001247267.1	2008	myoblast city, isoform B
3R	NT_033777.3	23802057	23808010	-	50068	CG33111	Dmel_CG33111	NP_001014646.1	515	uncharacterized protein Dmel_CG33111, isoform C
3R	NT_033777.3	23802057	23808010	-	50068	CG33111	Dmel_CG33111	NP_996272.1	515	uncharacterized protein Dmel_CG33111, isoform B
3R	NT_033777.3	23802057	23808010	-	50068	CG33111	Dmel_CG33111	NP_788725.1	515	uncharacterized protein Dmel_CG33111, isoform A
3R	NT_033777.3	23802227	23808010	-	50068	CG33111	Dmel_CG33111	NP_001262886.1	338	uncharacterized protein Dmel_CG33111, isoform D
3R	NT_033777.3	23806478	23808010	-	50068	CG33111	Dmel_CG33111	NP_001262887.1	353	uncharacterized protein Dmel_CG33111, isoform E
3R	NT_033777.3	23810294	23817011	-	42819	eIF4G2	Dmel_CG10192	NP_651188.1	2072	eukaryotic translation initiation factor 4G2, isoform A
3R	NT_033777.3	23810294	23817011	-	42819	eIF4G2	Dmel_CG10192	NP_001287489.1	2072	eukaryotic translation initiation factor 4G2, isoform C
3R	NT_033777.3	23821530	23849349	+	42820	CG34355	Dmel_CG34355	NP_001303544.1	747	uncharacterized protein Dmel_CG34355, isoform G
3R	NT_033777.3	23821530	23849349	+	42820	CG34355	Dmel_CG34355	NP_001097889.2	748	uncharacterized protein Dmel_CG34355, isoform B
3R	NT_033777.3	23821530	23849349	+	42820	CG34355	Dmel_CG34355	NP_001247269.1	755	uncharacterized protein Dmel_CG34355, isoform E
3R	NT_033777.3	23821530	23849349	+	42820	CG34355	Dmel_CG34355	NP_001287488.1	748	uncharacterized protein Dmel_CG34355, isoform F
3R	NT_033777.3	23861379	23889067	-	42821	Pli	Dmel_CG5212	NP_524466.1	424	pellino, isoform A
3R	NT_033777.3	23861379	23889067	-	42821	Pli	Dmel_CG5212	NP_001097890.1	424	pellino, isoform B
3R	NT_033777.3	23890579	23890955	-	42822	TfIIA-S	Dmel_CG5163	NP_524467.1	106	Transcription-factor-IIA-S
3R	NT_033777.3	23891711	23893252	-	42823	tbrd-1	Dmel_CG13597	NP_651190.1	513	testis-specifically expressed bromodomain containing protein-1
3R	NT_033777.3	23894939	23920800	-	42824	sba	Dmel_CG13598	NP_001262888.1	1606	six-banded, isoform H
3R	NT_033777.3	23895008	23920800	-	42824	sba	Dmel_CG13598	NP_001247271.1	1426	six-banded, isoform F
3R	NT_033777.3	23895008	23920800	-	42824	sba	Dmel_CG13598	NP_788726.2	1583	six-banded, isoform E
3R	NT_033777.3	23895008	23920800	-	42824	sba	Dmel_CG13598	NP_001097893.1	1583	six-banded, isoform D
3R	NT_033777.3	23895484	23920800	-	42824	sba	Dmel_CG13598	NP_732911.2	1362	six-banded, isoform G
3R	NT_033777.3	23895484	23920800	-	42824	sba	Dmel_CG13598	NP_001262889.1	1291	six-banded, isoform I
3R	NT_033777.3	23896767	23920800	-	42824	sba	Dmel_CG13598	NP_001097892.1	1385	six-banded, isoform C
3R	NT_033777.3	23923378	23924198	+	318605	CG31141	Dmel_CG31141	NP_732912.2	253	uncharacterized protein Dmel_CG31141
3R	NT_033777.3	23924544	23926340	+	42825	Ndc1	Dmel_CG5857	NP_651191.1	578	nuclear division cycle 1
3R	NT_033777.3	23926563	23927568	-	42826	CG13601	Dmel_CG13601	NP_001262890.1	277	uncharacterized protein Dmel_CG13601, isoform B
3R	NT_033777.3	23926629	23927568	-	42826	CG13601	Dmel_CG13601	NP_651192.1	255	uncharacterized protein Dmel_CG13601, isoform A
3R	NT_033777.3	23927784	23928306	-	19836181	CG43998	Dmel_CG43998	NP_001287492.1	153	uncharacterized protein Dmel_CG43998, isoform D
3R	NT_033777.3	23927784	23928306	-	19836181	CG43998	Dmel_CG43998	NP_001287491.1	153	uncharacterized protein Dmel_CG43998, isoform B
3R	NT_033777.3	23927784	23928306	-	19836181	CG43998	Dmel_CG43998	NP_732914.2	153	uncharacterized protein Dmel_CG43998, isoform C
3R	NT_033777.3	23928364	23928978	-	19836181	CG43998	Dmel_CG43998	NP_001287490.1	166	uncharacterized protein Dmel_CG43999, isoform C
3R	NT_033777.3	23928364	23928978	-	19836181	CG43998	Dmel_CG43998	NP_001036749.2	166	uncharacterized protein Dmel_CG43999, isoform B
3R	NT_033777.3	23929323	23929892	+	251610	CG31142	Dmel_CG31142	NP_732915.1	155	uncharacterized protein Dmel_CG31142
3R	NT_033777.3	23929946	23931326	-	42828	Rpt2	Dmel_CG5289	NP_001287493.1	439	regulatory particle triple-A ATPase 2, isoform B
3R	NT_033777.3	23929946	23931326	-	42828	Rpt2	Dmel_CG5289	NP_524469.2	439	regulatory particle triple-A ATPase 2, isoform A
3R	NT_033777.3	23931713	23932661	+	42829	CG13599	Dmel_CG13599	NP_651194.1	295	uncharacterized protein Dmel_CG13599
3R	NT_033777.3	23932858	23933395	-	42830	RpS19b	Dmel_CG5338	NP_651195.1	155	ribosomal protein S19b, isoform B
3R	NT_033777.3	23932858	23933395	-	42830	RpS19b	Dmel_CG5338	NP_001262891.1	155	ribosomal protein S19b, isoform C
3R	NT_033777.3	23934027	23935633	+	42831	CG5854	Dmel_CG5854	NP_651196.1	371	CG5854
3R	NT_033777.3	23936374	23943011	-	42832	Gdh	Dmel_CG5320	NP_996274.1	549	glutamate dehydrogenase, isoform F
3R	NT_033777.3	23936374	23938499	-	42832	Gdh	Dmel_CG5320	NP_996273.2	391	glutamate dehydrogenase, isoform D
3R	NT_033777.3	23936374	23938499	-	42832	Gdh	Dmel_CG5320	NP_732922.1	404	glutamate dehydrogenase, isoform B
3R	NT_033777.3	23936374	23943011	-	42832	Gdh	Dmel_CG5320	NP_524470.4	562	glutamate dehydrogenase, isoform A
3R	NT_033777.3	23943689	23946830	-	42833	CG12268	Dmel_CG12268	NP_001247272.1	531	uncharacterized protein Dmel_CG12268, isoform C
3R	NT_033777.3	23943689	23946830	-	42833	CG12268	Dmel_CG12268	NP_651197.1	531	uncharacterized protein Dmel_CG12268, isoform A
3R	NT_033777.3	23943689	23946830	-	42833	CG12268	Dmel_CG12268	NP_788727.1	531	uncharacterized protein Dmel_CG12268, isoform B
3R	NT_033777.3	23952290	23955493	-	42834	GluProRS	Dmel_CG5394	NP_732925.1	996	Glutamyl-prolyl-tRNA synthetase, isoform B
3R	NT_033777.3	23952290	23958285	-	42834	GluProRS	Dmel_CG5394	NP_524471.2	1714	Glutamyl-prolyl-tRNA synthetase, isoform A
3R	NT_033777.3	23958796	23962095	+	42835	AP-1sigma	Dmel_CG5864	NP_651198.1	157	adaptor protein complex 1, sigma subunit, isoform A
3R	NT_033777.3	23958796	23959922	+	42835	AP-1sigma	Dmel_CG5864	NP_001262892.1	152	adaptor protein complex 1, sigma subunit, isoform D
3R	NT_033777.3	23958796	23960942	+	42835	AP-1sigma	Dmel_CG5864	NP_001247274.1	157	adaptor protein complex 1, sigma subunit, isoform C
3R	NT_033777.3	23958796	23960942	+	42835	AP-1sigma	Dmel_CG5864	NP_001247273.1	157	adaptor protein complex 1, sigma subunit, isoform B
3R	NT_033777.3	23966591	23981905	+	42836	CG31140	Dmel_CG31140	NP_001247275.1	1498	uncharacterized protein Dmel_CG31140, isoform G
3R	NT_033777.3	23966591	23980776	+	42836	CG31140	Dmel_CG31140	NP_001097894.1	1555	uncharacterized protein Dmel_CG31140, isoform D
3R	NT_033777.3	23966591	23980776	+	42836	CG31140	Dmel_CG31140	NP_996275.2	1026	uncharacterized protein Dmel_CG31140, isoform F
3R	NT_033777.3	23966591	23973631	+	42836	CG31140	Dmel_CG31140	NP_001097895.1	254	uncharacterized protein Dmel_CG31140, isoform E
3R	NT_033777.3	23966591	23980824	+	42836	CG31140	Dmel_CG31140	NP_001262893.1	1571	uncharacterized protein Dmel_CG31140, isoform H
3R	NT_033777.3	23966591	23981905	+	42836	CG31140	Dmel_CG31140	NP_651199.2	1564	uncharacterized protein Dmel_CG31140, isoform A
3R	NT_033777.3	23966591	23981905	+	42836	CG31140	Dmel_CG31140	NP_996276.1	1055	uncharacterized protein Dmel_CG31140, isoform B
3R	NT_033777.3	23985473	23986485	-	42838	CG13603	Dmel_CG13603	NP_651200.1	233	uncharacterized protein Dmel_CG13603
3R	NT_033777.3	23987428	23988159	+	42839	CG5902	Dmel_CG5902	NP_732929.1	243	CG5902, isoform B
3R	NT_033777.3	23987428	23988159	+	42839	CG5902	Dmel_CG5902	NP_651201.1	243	CG5902, isoform A
3R	NT_033777.3	23987428	23988159	+	42839	CG5902	Dmel_CG5902	NP_001163705.1	243	CG5902, isoform C
3R	NT_033777.3	23989436	23992796	-	42840	CG13604	Dmel_CG13604	NP_001262894.1	763	uncharacterized protein Dmel_CG13604, isoform E
3R	NT_033777.3	23989472	23992796	-	42840	CG13604	Dmel_CG13604	NP_001097898.1	717	uncharacterized protein Dmel_CG13604, isoform D
3R	NT_033777.3	23989472	23990470	-	42840	CG13604	Dmel_CG13604	NP_001097897.1	312	uncharacterized protein Dmel_CG13604, isoform C
3R	NT_033777.3	23989472	23990470	-	42840	CG13604	Dmel_CG13604	NP_001097896.1	312	uncharacterized protein Dmel_CG13604, isoform B
3R	NT_033777.3	23989472	23992796	-	42840	CG13604	Dmel_CG13604	NP_651202.1	751	uncharacterized protein Dmel_CG13604, isoform A
3R	NT_033777.3	23994002	23994750	+	42841	Rab7	Dmel_CG5915	NP_001247276.1	207	Rab7, isoform B
3R	NT_033777.3	23994002	23994750	+	42841	Rab7	Dmel_CG5915	NP_001247277.1	207	Rab7, isoform C
3R	NT_033777.3	23994002	23994750	+	42841	Rab7	Dmel_CG5915	NP_524472.1	207	Rab7, isoform A
3R	NT_033777.3	23995736	23997494	+	326257	CG33108	Dmel_CG33108	NP_788728.1	267	uncharacterized protein Dmel_CG33108, isoform A
3R	NT_033777.3	23995736	23996343	+	326257	CG33108	Dmel_CG33108	NP_001163706.1	180	uncharacterized protein Dmel_CG33108, isoform B
3R	NT_033777.3	23996518	23996942	+	42842	LSm3	Dmel_CG31184	NP_732931.1	103	like Sm 3, isoform A
3R	NT_033777.3	23996518	23996942	+	42842	LSm3	Dmel_CG31184	NP_001163707.1	103	like Sm 3, isoform B
3R	NT_033777.3	23998638	24030768	-	42843	KrT95D	Dmel_CG5405	NP_732935.2	1133	krueppel target at 95D, isoform C
3R	NT_033777.3	23998638	24005852	-	42843	KrT95D	Dmel_CG5405	NP_732934.2	842	krueppel target at 95D, isoform D
3R	NT_033777.3	23998638	24030768	-	42843	KrT95D	Dmel_CG5405	NP_524473.2	1175	krueppel target at 95D, isoform A
3R	NT_033777.3	23998638	24030768	-	42843	KrT95D	Dmel_CG5405	NP_732933.1	1175	krueppel target at 95D, isoform B
3R	NT_033777.3	23998638	24030768	-	42843	KrT95D	Dmel_CG5405	NP_001163709.2	1133	krueppel target at 95D, isoform F
3R	NT_033777.3	24032197	24034153	+	42844	Ime4	Dmel_CG5933	NP_651204.1	608	inducer of meiosis 4
3R	NT_033777.3	24034894	24037548	-	42845	Miro	Dmel_CG5410	NP_732936.1	652	mitochondrial Rho, isoform D
3R	NT_033777.3	24034894	24037548	-	42845	Miro	Dmel_CG5410	NP_001262895.1	673	mitochondrial Rho, isoform F
3R	NT_033777.3	24034894	24037548	-	42845	Miro	Dmel_CG5410	NP_651205.2	673	mitochondrial Rho, isoform E
3R	NT_033777.3	24034894	24037548	-	42845	Miro	Dmel_CG5410	NP_732939.2	665	mitochondrial Rho, isoform C
3R	NT_033777.3	24038509	24041624	+	42846	spas	Dmel_CG5977	NP_001287494.1	696	spastin, isoform D
3R	NT_033777.3	24038509	24041624	+	42846	spas	Dmel_CG5977	NP_651206.3	758	spastin, isoform B
3R	NT_033777.3	24038509	24041624	+	42846	spas	Dmel_CG5977	NP_001262896.1	696	spastin, isoform C
3R	NT_033777.3	24038509	24041624	+	42846	spas	Dmel_CG5977	NP_732941.2	758	spastin, isoform A
3R	NT_033777.3	24039130	24041624	+	42846	spas	Dmel_CG5977	NP_001303437.1	489	spastin, isoform F
3R	NT_033777.3	24039130	24041624	+	42846	spas	Dmel_CG5977	NP_001303438.1	551	spastin, isoform E
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_732942.1	464	Rox8, isoform B
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_732945.1	470	Rox8, isoform D
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_001262898.1	470	Rox8, isoform H
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_732944.2	470	Rox8, isoform E
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_001262897.1	470	Rox8, isoform G
3R	NT_033777.3	24043964	24045665	-	42848	Rox8	Dmel_CG5422	NP_732943.1	464	Rox8, isoform C
3R	NT_033777.3	24048332	24049088	+	192506	CG5986	Dmel_CG5986	NP_001262899.1	232	CG5986, isoform B
3R	NT_033777.3	24048332	24049088	+	192506	CG5986	Dmel_CG5986	NP_651207.1	232	CG5986, isoform A
3R	NT_033777.3	24049259	24050637	-	42850	Atg6	Dmel_CG5429	NP_651209.1	422	Autophagy-related 6
3R	NT_033777.3	24052047	24053390	+	42849	CG5991	Dmel_CG5991	NP_732949.1	447	CG5991, isoform C
3R	NT_033777.3	24052047	24053390	+	42849	CG5991	Dmel_CG5991	NP_732948.1	447	CG5991, isoform B
3R	NT_033777.3	24052047	24053390	+	42849	CG5991	Dmel_CG5991	NP_651208.1	447	CG5991, isoform A
3R	NT_033777.3	24054495	24054959	+	42851	CG6000	Dmel_CG6000	NP_651210.3	154	CG6000, isoform C
3R	NT_033777.3	24054495	24054959	+	42851	CG6000	Dmel_CG6000	NP_001287495.1	154	CG6000, isoform D
3R	NT_033777.3	24055197	24057104	-	42852	Hsp68	Dmel_CG5436	NP_524474.1	635	heat shock protein 68
3R	NT_033777.3	24058401	24062722	+	42853	SMC1	Dmel_CG6057	NP_651211.2	1238	structural maintenance of chromosomes 1
3R	NT_033777.3	24063807	24108507	-	326255	4EHP	Dmel_CG33100	NP_788729.1	223	eIF4E-Homologous protein, isoform A
3R	NT_033777.3	24063979	24108507	-	326255	4EHP	Dmel_CG33100	NP_001189275.1	242	eIF4E-Homologous protein, isoform D
3R	NT_033777.3	24068002	24108507	-	326255	4EHP	Dmel_CG33100	NP_001189274.1	186	eIF4E-Homologous protein, isoform C
3R	NT_033777.3	24101798	24108507	-	326255	4EHP	Dmel_CG33100	NP_001163710.1	248	eIF4E-Homologous protein, isoform B
3R	NT_033777.3	24102028	24104443	-	42854	Syx1A	Dmel_CG31136	NP_001189276.1	296	syntaxin 1A, isoform B
3R	NT_033777.3	24103568	24104443	-	42854	Syx1A	Dmel_CG31136	NP_001303545.1	291	syntaxin 1A, isoform C
3R	NT_033777.3	24103568	24104443	-	42854	Syx1A	Dmel_CG31136	NP_524475.1	291	syntaxin 1A, isoform A
3R	NT_033777.3	24107449	24108321	+	42855	CG10694	Dmel_CG10694	NP_651212.1	290	uncharacterized protein Dmel_CG10694
3R	NT_033777.3	24109396	24109596	+	42857	CG18428	Dmel_CG18428	NP_001247278.1	66	uncharacterized protein Dmel_CG18428, isoform B
3R	NT_033777.3	24109396	24109897	+	42857	CG18428	Dmel_CG18428	NP_651213.1	144	uncharacterized protein Dmel_CG18428, isoform A
3R	NT_033777.3	24109661	24109897	+	42857	CG18428	Dmel_CG18428	NP_001287496.1	78	uncharacterized protein Dmel_CG18428, isoform C
3R	NT_033777.3	24110041	24112322	-	42858	CG13605	Dmel_CG13605	NP_651214.2	669	uncharacterized protein Dmel_CG13605
3R	NT_033777.3	24114436	24116076	-	42859	CG13607	Dmel_CG13607	NP_651215.1	546	uncharacterized protein Dmel_CG13607, isoform A
3R	NT_033777.3	24114436	24116076	-	42859	CG13607	Dmel_CG13607	NP_001189278.1	546	uncharacterized protein Dmel_CG13607, isoform C
3R	NT_033777.3	24120303	24127703	+	42860	Root	Dmel_CG6129	NP_788730.2	2048	rootletin, isoform F
3R	NT_033777.3	24120303	24127703	+	42860	Root	Dmel_CG6129	NP_001287497.1	2048	rootletin, isoform E
3R	NT_033777.3	24120303	24127703	+	42860	Root	Dmel_CG6129	NP_651216.2	2048	rootletin, isoform D
3R	NT_033777.3	24128212	24130183	-	42861	GatB	Dmel_CG5463	NP_651217.2	516	Glutamyl-tRNA amidotransferase, subunit B
3R	NT_033777.3	24130666	24134329	+	42862	Tsc1	Dmel_CG6147	NP_477415.1	1100	Tsc1
3R	NT_033777.3	24134914	24137374	+	42863	Sec10	Dmel_CG6159	NP_651218.1	710	secretory 10
3R	NT_033777.3	24138053	24140895	+	42864	Npc2f	Dmel_CG6164	NP_651219.1	170	Niemann-Pick type C-2f
3R	NT_033777.3	24145224	24147372	+	42865	Kal1	Dmel_CG6173	NP_651220.3	525	kallmann syndrome 1
3R	NT_033777.3	24147507	24148901	-	318604	Slimp	Dmel_CG31133	NP_732958.1	464	Seryl-tRNA synthetase-like insect mitochondrial protein
3R	NT_033777.3	24149112	24150182	-	2768679	p38c	Dmel_CG33338	NP_996277.1	356	p38c MAP kinase
3R	NT_033777.3	24150602	24151702	-	42866	p38a	Dmel_CG5475	NP_001163711.1	366	p38a MAP kinase, isoform C
3R	NT_033777.3	24150602	24151702	-	42866	p38a	Dmel_CG5475	NP_732959.1	366	p38a MAP kinase, isoform B
3R	NT_033777.3	24150602	24151702	-	42866	p38a	Dmel_CG5475	NP_477163.1	366	p38a MAP kinase, isoform A
3R	NT_033777.3	24153097	24154787	+	42867	CG6178	Dmel_CG6178	NP_651221.1	544	CG6178
3R	NT_033777.3	24156016	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_001027204.2	1258	myosin 95E, isoform J
3R	NT_033777.3	24156016	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_996278.1	1278	myosin 95E, isoform D
3R	NT_033777.3	24156016	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_001027208.1	1288	myosin 95E, isoform E
3R	NT_033777.3	24156016	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_996279.1	1258	myosin 95E, isoform B
3R	NT_033777.3	24159256	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_001027206.1	464	myosin 95E, isoform G
3R	NT_033777.3	24159256	24161030	-	2768680	Myo95E	Dmel_CG5501	NP_001027207.1	464	myosin 95E, isoform F
3R	NT_033777.3	24161790	24162826	+	42869	CG6182	Dmel_CG6182	NP_651223.2	306	CG6182
3R	NT_033777.3	24162871	24163485	-	42870	mRpS24	Dmel_CG13608	NP_524476.1	165	mitochondrial ribosomal protein S24
3R	NT_033777.3	24164174	24167637	+	42871	Apc2	Dmel_CG6193	NP_001334699.1	1067	adenomatous polyposis coli 2, isoform C
3R	NT_033777.3	24164174	24167637	+	42871	Apc2	Dmel_CG6193	NP_001334698.1	1047	adenomatous polyposis coli 2, isoform B
3R	NT_033777.3	24164174	24167637	+	42871	Apc2	Dmel_CG6193	NP_477430.1	1067	adenomatous polyposis coli 2, isoform A
3R	NT_033777.3	24167938	24169453	-	42872	CG5510	Dmel_CG5510	NP_651224.1	329	CG5510
3R	NT_033777.3	24173104	24180717	+	42873	CG13606	Dmel_CG13606	NP_651225.1	99	uncharacterized protein Dmel_CG13606, isoform A
3R	NT_033777.3	24173104	24180923	+	42873	CG13606	Dmel_CG13606	NP_001262900.1	94	uncharacterized protein Dmel_CG13606, isoform C
3R	NT_033777.3	24173104	24183998	+	42873	CG13606	Dmel_CG13606	NP_001287498.1	134	uncharacterized protein Dmel_CG13606, isoform D
3R	NT_033777.3	24173104	24183998	+	42873	CG13606	Dmel_CG13606	NP_001036750.1	133	uncharacterized protein Dmel_CG13606, isoform B
3R	NT_033777.3	24186480	24187730	+	42874	CHORD	Dmel_CG6198	NP_651226.1	354	CHORD
3R	NT_033777.3	24187803	24188591	-	42875	CG5515	Dmel_CG5515	NP_001262901.1	244	CG5515, isoform C
3R	NT_033777.3	24187803	24188591	-	42875	CG5515	Dmel_CG5515	NP_001287499.1	244	CG5515, isoform D
3R	NT_033777.3	24187803	24188591	-	42875	CG5515	Dmel_CG5515	NP_651227.2	244	CG5515, isoform A
3R	NT_033777.3	24187803	24188591	-	42875	CG5515	Dmel_CG5515	NP_788731.1	244	CG5515, isoform B
3R	NT_033777.3	24189148	24193233	-	42876	jnj	Dmel_CG5524	NP_651228.1	1122	java no jive
3R	NT_033777.3	24193901	24196851	+	42877	CG6204	Dmel_CG6204	NP_651229.2	903	CG6204
3R	NT_033777.3	24198436	24220847	-	42880	twin	Dmel_CG31137	NP_732964.1	567	twin, isoform C
3R	NT_033777.3	24198436	24220538	-	42880	twin	Dmel_CG31137	NP_788732.1	552	twin, isoform F
3R	NT_033777.3	24198436	24220329	-	42880	twin	Dmel_CG31137	NP_732967.1	545	twin, isoform B
3R	NT_033777.3	24198436	24199573	-	42880	twin	Dmel_CG31137	NP_732968.1	358	twin, isoform D
3R	NT_033777.3	24198436	24220538	-	42880	twin	Dmel_CG31137	NP_732966.1	552	twin, isoform E
3R	NT_033777.3	24198436	24220538	-	42880	twin	Dmel_CG31137	NP_732965.1	552	twin, isoform A
3R	NT_033777.3	24216705	24218459	-	42879	CG17786	Dmel_CG17786	NP_651231.1	584	uncharacterized protein Dmel_CG17786
3R	NT_033777.3	24221742	24223423	+	42881	cav	Dmel_CG6219	NP_732971.2	343	caravaggio, isoform E
3R	NT_033777.3	24221908	24223423	+	42881	cav	Dmel_CG6219	NP_524477.3	345	caravaggio, isoform A
3R	NT_033777.3	24222349	24223423	+	42881	cav	Dmel_CG6219	NP_732970.1	337	caravaggio, isoform D
3R	NT_033777.3	24222349	24223423	+	42881	cav	Dmel_CG6219	NP_732969.1	337	caravaggio, isoform B
3R	NT_033777.3	24223698	24226655	-	42882	Spps	Dmel_CG5669	NP_001262902.1	985	Sp1-like factor for pairing sensitive-silencing, isoform B
3R	NT_033777.3	24223749	24226655	-	42882	Spps	Dmel_CG5669	NP_651232.1	968	Sp1-like factor for pairing sensitive-silencing, isoform A
3R	NT_033777.3	24227124	24228218	+	42883	CG13609	Dmel_CG13609	NP_651233.1	364	uncharacterized protein Dmel_CG13609
3R	NT_033777.3	24228992	24229212	+	47852	Acp95EF	Dmel_CG17924	NP_524898.1	52	accessory gland protein 95EF
3R	NT_033777.3	24229418	24229957	-	42885	Spase22-23	Dmel_CG5677	NP_651234.1	179	spase 22/23-subunit, isoform A
3R	NT_033777.3	24229418	24229957	-	42885	Spase22-23	Dmel_CG5677	NP_001247279.1	179	spase 22/23-subunit, isoform B
3R	NT_033777.3	24231724	24248014	+	50070	mask	Dmel_CG33106	NP_001247280.1	4010	multiple ankyrin repeats single KH domain, isoform C
3R	NT_033777.3	24231724	24248014	+	50070	mask	Dmel_CG33106	NP_788734.1	4001	multiple ankyrin repeats single KH domain, isoform B
3R	NT_033777.3	24231724	24248014	+	50070	mask	Dmel_CG33106	NP_788733.1	4001	multiple ankyrin repeats single KH domain, isoform A
3R	NT_033777.3	24231724	24248014	+	50070	mask	Dmel_CG33106	NP_001262904.1	4000	multiple ankyrin repeats single KH domain, isoform E
3R	NT_033777.3	24235154	24248014	+	50070	mask	Dmel_CG33106	NP_001262903.1	3636	multiple ankyrin repeats single KH domain, isoform D
3R	NT_033777.3	24235154	24248014	+	50070	mask	Dmel_CG33106	NP_001287500.1	3623	multiple ankyrin repeats single KH domain, isoform F
3R	NT_033777.3	24250524	24252553	-	42888	beta-PheRS	Dmel_CG5706	NP_651237.1	589	Phenylalanyl-tRNA synthetase, beta-subunit
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001014648.2	1253	jaguar, isoform J
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001287501.1	1238	jaguar, isoform N
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_732976.1	1253	jaguar, isoform B
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001262905.1	1268	jaguar, isoform L
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001014647.2	1253	jaguar, isoform K
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001262906.1	1253	jaguar, isoform M
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_524478.4	1253	jaguar, isoform G
3R	NT_033777.3	24253318	24259241	-	42889	jar	Dmel_CG5695	NP_001014650.2	1268	jaguar, isoform H
3R	NT_033777.3	24254552	24259241	-	42889	jar	Dmel_CG5695	NP_001014649.2	1073	jaguar, isoform I
3R	NT_033777.3	24273430	24275133	+	42890	Orct2	Dmel_CG13610	NP_001262907.1	567	organic cation transporter 2, isoform B
3R	NT_033777.3	24273430	24275133	+	42890	Orct2	Dmel_CG13610	NP_651238.2	567	organic cation transporter 2, isoform A
3R	NT_033777.3	24276945	24278591	+	42891	Orct	Dmel_CG6331	NP_524479.1	548	organic cation transporter, isoform A
3R	NT_033777.3	24276945	24278591	+	42891	Orct	Dmel_CG6331	NP_001262908.1	548	organic cation transporter, isoform B
3R	NT_033777.3	24279631	24281521	+	42892	CG13611	Dmel_CG13611	NP_651239.1	477	uncharacterized protein Dmel_CG13611
3R	NT_033777.3	24284729	24288217	+	42893	CG6356	Dmel_CG6356	NP_651240.1	570	CG6356
3R	NT_033777.3	24288608	24289790	-	5740609	CG34290	Dmel_CG34290	NP_001097899.2	282	uncharacterized protein Dmel_CG34290
3R	NT_033777.3	24290251	24291624	+	42894	CG6364	Dmel_CG6364	NP_001247281.1	260	CG6364, isoform D
3R	NT_033777.3	24290251	24291624	+	42894	CG6364	Dmel_CG6364	NP_001247282.1	260	CG6364, isoform E
3R	NT_033777.3	24290251	24291624	+	42894	CG6364	Dmel_CG6364	NP_001247283.1	260	CG6364, isoform C
3R	NT_033777.3	24290251	24293244	+	42894	CG6364	Dmel_CG6364	NP_001138105.1	305	CG6364, isoform B
3R	NT_033777.3	24290251	24291624	+	42894	CG6364	Dmel_CG6364	NP_651241.1	260	CG6364, isoform A
3R	NT_033777.3	24293427	24294370	-	42895	CG5715	Dmel_CG5715	NP_651242.1	295	CG5715
3R	NT_033777.3	24295627	24313879	+	42896	crb	Dmel_CG6383	NP_524480.2	2146	crumbs, isoform A
3R	NT_033777.3	24295627	24313879	+	42896	crb	Dmel_CG6383	NP_001036751.1	2189	crumbs, isoform B
3R	NT_033777.3	24295627	24313879	+	42896	crb	Dmel_CG6383	NP_001247284.1	2253	crumbs, isoform C
3R	NT_033777.3	24295627	24313879	+	42896	crb	Dmel_CG6383	NP_001262909.1	2203	crumbs, isoform D
3R	NT_033777.3	24314972	24318256	-	42897	Nab2	Dmel_CG5720	NP_651243.1	1004	nuclear polyadenosine RNA-binding 2
3R	NT_033777.3	24319115	24328189	+	42898	BRWD3	Dmel_CG31132	NP_732982.1	2232	BRWD3
3R	NT_033777.3	24328689	24333221	-	42899	CG5728	Dmel_CG5728	NP_651245.1	1430	CG5728
3R	NT_033777.3	24333493	24336669	+	42900	Dis3	Dmel_CG6413	NP_651246.2	982	Dis3, isoform A
3R	NT_033777.3	24333493	24336669	+	42900	Dis3	Dmel_CG6413	NP_001262910.1	982	Dis3, isoform B
3R	NT_033777.3	24337034	24340067	+	42901	CG6432	Dmel_CG6432	NP_651247.1	674	CG6432, isoform A
3R	NT_033777.3	24337034	24340067	+	42901	CG6432	Dmel_CG6432	NP_001287502.1	674	CG6432, isoform B
3R	NT_033777.3	24342829	24343194	+	44324	Ms	Dmel_CG6440	NP_536772.1	100	myosuppressin, isoform A
3R	NT_033777.3	24342829	24343194	+	44324	Ms	Dmel_CG6440	NP_001287503.1	100	myosuppressin, isoform C
3R	NT_033777.3	24342829	24343194	+	44324	Ms	Dmel_CG6440	NP_001262911.1	100	myosuppressin, isoform B
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_001262914.1	454	CG5746, isoform G
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_001138106.1	480	CG5746, isoform C
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_651248.2	457	CG5746, isoform A
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_001262913.1	474	CG5746, isoform F
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_001138107.1	480	CG5746, isoform D
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_001262912.1	451	CG5746, isoform E
3R	NT_033777.3	24346711	24348474	-	42903	CG5746	Dmel_CG5746	NP_732983.1	457	CG5746, isoform B
3R	NT_033777.3	24349308	24355778	+	42904	CG6454	Dmel_CG6454	NP_651249.2	1569	CG6454, isoform C
3R	NT_033777.3	24349308	24355778	+	42904	CG6454	Dmel_CG6454	NP_732985.2	1127	CG6454, isoform D
3R	NT_033777.3	24349308	24355802	+	42904	CG6454	Dmel_CG6454	NP_001262915.1	1135	CG6454, isoform E
3R	NT_033777.3	24356271	24357876	-	42905	Golgin84	Dmel_CG17785	NP_651250.2	516	Golgin-84
3R	NT_033777.3	24358211	24360066	-	42906	CG18528	Dmel_CG18528	NP_651251.3	493	uncharacterized protein Dmel_CG18528
3R	NT_033777.3	24360891	24361551	-	42907	CG5762	Dmel_CG5762	NP_651252.1	200	CG5762
3R	NT_033777.3	24361847	24363066	+	2768681	CG33339	Dmel_CG33339	NP_996280.2	313	uncharacterized protein Dmel_CG33339
3R	NT_033777.3	24363274	24363963	+	2768682	CG33340	Dmel_CG33340	NP_996281.1	229	uncharacterized protein Dmel_CG33340
3R	NT_033777.3	24364081	24364980	-	42909	CG17784	Dmel_CG17784	NP_651254.1	237	uncharacterized protein Dmel_CG17784
3R	NT_033777.3	24365554	24366349	+	42910	CG13613	Dmel_CG13613	NP_001097900.2	219	uncharacterized protein Dmel_CG13613
3R	NT_033777.3	24366527	24367220	-	10178941	CG42811	Dmel_CG42811	NP_001189279.1	213	uncharacterized protein Dmel_CG42811
3R	NT_033777.3	24367360	24368127	-	50072	CG42812	Dmel_CG42812	NP_001097901.2	217	uncharacterized protein Dmel_CG42812
3R	NT_033777.3	24368358	24369394	+	2768683	CG33341	Dmel_CG33341	NP_996282.1	306	uncharacterized protein Dmel_CG33341
3R	NT_033777.3	24369568	24370731	+	42911	CG13614	Dmel_CG13614	NP_651256.2	348	uncharacterized protein Dmel_CG13614
3R	NT_033777.3	24370769	24372736	-	42912	CG17782	Dmel_CG17782	NP_651257.1	479	uncharacterized protein Dmel_CG17782
3R	NT_033777.3	24373491	24374910	-	42913	CG17781	Dmel_CG17781	NP_651258.1	429	uncharacterized protein Dmel_CG17781
3R	NT_033777.3	24376865	24377705	+	2768684	CG33342	Dmel_CG33342	NP_001097904.1	219	HDC15381
3R	NT_033777.3	24383347	24384884	-	42914	CG17780	Dmel_CG17780	NP_732995.1	345	uncharacterized protein Dmel_CG17780, isoform B
3R	NT_033777.3	24383347	24384884	-	42914	CG17780	Dmel_CG17780	NP_651259.1	227	uncharacterized protein Dmel_CG17780, isoform A
3R	NT_033777.3	24386126	24390325	-	42915	CG5768	Dmel_CG5768	NP_651260.3	262	CG5768, isoform C
3R	NT_033777.3	24386126	24390325	-	42915	CG5768	Dmel_CG5768	NP_732997.3	262	CG5768, isoform D
3R	NT_033777.3	24390592	24391727	+	42916	CG13615	Dmel_CG13615	NP_651261.2	331	uncharacterized protein Dmel_CG13615
3R	NT_033777.3	24392923	24393175	+	42917	CG13616	Dmel_CG13616	NP_001287504.1	63	uncharacterized protein Dmel_CG13616, isoform B
3R	NT_033777.3	24392923	24393742	+	42917	CG13616	Dmel_CG13616	NP_651262.1	231	uncharacterized protein Dmel_CG13616, isoform A
3R	NT_033777.3	24401649	24421886	-	42918	nAChRalpha1	Dmel_CG5610	NP_001262916.1	597	nicotinic acetylcholine receptor alpha1, isoform B
3R	NT_033777.3	24401739	24421886	-	42918	nAChRalpha1	Dmel_CG5610	NP_524481.2	567	nicotinic acetylcholine receptor alpha1, isoform A
3R	NT_033777.3	24401739	24421886	-	42918	nAChRalpha1	Dmel_CG5610	NP_001262917.1	567	nicotinic acetylcholine receptor alpha1, isoform C
3R	NT_033777.3	24469441	24469995	+	318601	CG31128	Dmel_CG31128	NP_733000.1	166	uncharacterized protein Dmel_CG31128
3R	NT_033777.3	24485949	24491012	+	42919	nAChRalpha2	Dmel_CG6844	NP_524482.1	576	nicotinic acetylcholine receptor alpha2, isoform A
3R	NT_033777.3	24485949	24491012	+	42919	nAChRalpha2	Dmel_CG6844	NP_733001.1	576	nicotinic acetylcholine receptor alpha2, isoform B
3R	NT_033777.3	24509424	24514970	-	42920	nAChRbeta2	Dmel_CG6798	NP_524483.1	519	nicotinic acetylcholine receptor beta2, isoform A
3R	NT_033777.3	24513608	24514970	-	42920	nAChRbeta2	Dmel_CG6798	NP_733002.1	304	nicotinic acetylcholine receptor beta2, isoform B
3R	NT_033777.3	24515595	24518037	+	42921	CG13617	Dmel_CG13617	NP_001262918.1	737	uncharacterized protein Dmel_CG13617, isoform B
3R	NT_033777.3	24515595	24518037	+	42921	CG13617	Dmel_CG13617	NP_651263.1	737	uncharacterized protein Dmel_CG13617, isoform A
3R	NT_033777.3	24518659	24520494	+	42922	Pp1alpha-96A	Dmel_CG6593	NP_001262919.1	327	protein phosphatase 1alpha at 96A, isoform B
3R	NT_033777.3	24518659	24520494	+	42922	Pp1alpha-96A	Dmel_CG6593	NP_524484.1	327	protein phosphatase 1alpha at 96A, isoform A
3R	NT_033777.3	24522590	24523432	-	42923	CG13622	Dmel_CG13622	NP_651264.2	280	uncharacterized protein Dmel_CG13622
3R	NT_033777.3	24524973	24527450	+	42924	CG13618	Dmel_CG13618	NP_651265.1	252	uncharacterized protein Dmel_CG13618
3R	NT_033777.3	24528177	24529652	+	42925	CG6607	Dmel_CG6607	NP_651266.1	406	CG6607
3R	NT_033777.3	24529821	24530301	-	42926	CG13623	Dmel_CG13623	NP_651267.1	139	uncharacterized protein Dmel_CG13623, isoform A
3R	NT_033777.3	24529821	24530301	-	42926	CG13623	Dmel_CG13623	NP_001262920.1	139	uncharacterized protein Dmel_CG13623, isoform B
3R	NT_033777.3	24530786	24536185	+	42927	ana1	Dmel_CG6631	NP_651268.1	1729	anastral spindle 1, isoform A
3R	NT_033777.3	24530786	24536185	+	42927	ana1	Dmel_CG6631	NP_733008.2	1729	anastral spindle 1, isoform C
3R	NT_033777.3	24536919	24541542	-	42928	CG5789	Dmel_CG5789	NP_651269.1	1402	CG5789, isoform A
3R	NT_033777.3	24536919	24541542	-	42928	CG5789	Dmel_CG5789	NP_001247286.1	1402	CG5789, isoform B
3R	NT_033777.3	24549760	24556325	+	42929	Esyt2	Dmel_CG6643	NP_001247287.1	853	extended synaptotagmin-like protein 2, isoform C
3R	NT_033777.3	24549760	24556325	+	42929	Esyt2	Dmel_CG6643	NP_001262921.1	846	extended synaptotagmin-like protein 2, isoform D
3R	NT_033777.3	24549760	24556325	+	42929	Esyt2	Dmel_CG6643	NP_733011.2	849	extended synaptotagmin-like protein 2, isoform B
3R	NT_033777.3	24551423	24556325	+	42929	Esyt2	Dmel_CG6643	NP_733010.1	816	extended synaptotagmin-like protein 2, isoform A
3R	NT_033777.3	24560208	24562842	-	42930	REPTOR	Dmel_CG13624	NP_001036752.1	814	repressed by TOR, isoform E
3R	NT_033777.3	24560208	24562842	-	42930	REPTOR	Dmel_CG13624	NP_001036753.1	814	repressed by TOR, isoform F
3R	NT_033777.3	24560508	24562842	-	42930	REPTOR	Dmel_CG13624	NP_733013.1	755	repressed by TOR, isoform B
3R	NT_033777.3	24560508	24562842	-	42930	REPTOR	Dmel_CG13624	NP_733014.1	755	repressed by TOR, isoform D
3R	NT_033777.3	24560508	24562842	-	42930	REPTOR	Dmel_CG13624	NP_001287505.1	755	repressed by TOR, isoform G
3R	NT_033777.3	24560508	24562842	-	42930	REPTOR	Dmel_CG13624	NP_651271.1	755	repressed by TOR, isoform C
3R	NT_033777.3	24560508	24562842	-	42930	REPTOR	Dmel_CG13624	NP_733012.1	755	repressed by TOR, isoform A
3R	NT_033777.3	24583137	24585080	-	42931	CG13625	Dmel_CG13625	NP_651272.1	647	uncharacterized protein Dmel_CG13625
3R	NT_033777.3	24590771	24623172	+	2768685	mld	Dmel_CG34100	NP_001036754.1	1918	molting defective, isoform A
3R	NT_033777.3	24590771	24623172	+	2768685	mld	Dmel_CG34100	NP_651273.2	1943	molting defective, isoform E
3R	NT_033777.3	24590771	24623172	+	2768685	mld	Dmel_CG34100	NP_001247288.1	1896	molting defective, isoform F
3R	NT_033777.3	24590771	24623172	+	2768685	mld	Dmel_CG34100	NP_001247289.1	1965	molting defective, isoform D
3R	NT_033777.3	24590771	24623172	+	2768685	mld	Dmel_CG34100	NP_001036755.2	1918	molting defective, isoform C
3R	NT_033777.3	24623967	24625473	-	42933	Syx18	Dmel_CG13626	NP_524485.1	395	syntaxin 18
3R	NT_033777.3	24627376	24629866	-	318600	Wsck	Dmel_CG31127	NP_733018.1	791	wsck
3R	NT_033777.3	24631897	24633707	+	42934	atl	Dmel_CG6668	NP_733020.1	541	atlastin, isoform B
3R	NT_033777.3	24631897	24633707	+	42934	atl	Dmel_CG6668	NP_001287506.1	541	atlastin, isoform C
3R	NT_033777.3	24631897	24633707	+	42934	atl	Dmel_CG6668	NP_651274.1	541	atlastin, isoform A
3R	NT_033777.3	24634757	24635011	-	12798528	CG43222	Dmel_CG43222	NP_001287507.1	64	uncharacterized protein Dmel_CG43222, isoform B
3R	NT_033777.3	24634757	24635011	-	12798528	CG43222	Dmel_CG43222	NP_001247291.1	64	uncharacterized protein Dmel_CG43222, isoform A
3R	NT_033777.3	24636404	24649686	-	42935	puf	Dmel_CG5794	NP_001262923.1	3930	puffyeye, isoform H
3R	NT_033777.3	24636458	24649686	-	42935	puf	Dmel_CG5794	NP_001287508.1	3921	puffyeye, isoform I
3R	NT_033777.3	24636458	24649686	-	42935	puf	Dmel_CG5794	NP_651275.1	3912	puffyeye, isoform D
3R	NT_033777.3	24636458	24649686	-	42935	puf	Dmel_CG5794	NP_733022.2	3912	puffyeye, isoform F
3R	NT_033777.3	24636458	24649686	-	42935	puf	Dmel_CG5794	NP_001262922.1	3921	puffyeye, isoform G
3R	NT_033777.3	24640420	24649686	-	42935	puf	Dmel_CG5794	NP_996287.1	2832	puffyeye, isoform E
3R	NT_033777.3	24650229	24653202	+	42936	ash2	Dmel_CG6677	NP_788735.1	556	absent, small, or homeotic discs 2, isoform C
3R	NT_033777.3	24651603	24653202	+	42936	ash2	Dmel_CG6677	NP_733024.1	350	absent, small, or homeotic discs 2, isoform B
3R	NT_033777.3	24652223	24653202	+	42936	ash2	Dmel_CG6677	NP_001247292.1	220	absent, small, or homeotic discs 2, isoform E
3R	NT_033777.3	24653394	24654569	-	318599	CG31125	Dmel_CG31125	NP_733025.1	391	uncharacterized protein Dmel_CG31125
3R	NT_033777.3	24655284	24659219	+	42937	CG6695	Dmel_CG6695	NP_651276.2	961	CG6695, isoform A
3R	NT_033777.3	24655284	24658379	+	42937	CG6695	Dmel_CG6695	NP_996288.1	715	CG6695, isoform B
3R	NT_033777.3	24659661	24660169	+	326121	CG31126	Dmel_CG31126	NP_733027.2	150	uncharacterized protein Dmel_CG31126
3R	NT_033777.3	24660298	24661725	-	42939	Ppox	Dmel_CG5796	NP_651278.2	475	protoporphyrinogen oxidase
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014658.1	1180	slowpoke, isoform J
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014656.1	1187	slowpoke, isoform L
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014659.1	1213	slowpoke, isoform I
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014662.1	1175	slowpoke, isoform F
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014651.1	1175	slowpoke, isoform Q
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014652.1	1164	slowpoke, isoform P
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014663.1	1175	slowpoke, isoform E
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014653.1	1164	slowpoke, isoform O
3R	NT_033777.3	24668862	24707458	+	42940	slo	Dmel_CG10693	NP_001262925.1	1191	slowpoke, isoform U
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014657.1	1164	slowpoke, isoform K
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014654.1	1200	slowpoke, isoform N
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_524486.2	1175	slowpoke, isoform A
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014660.1	1175	slowpoke, isoform H
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014655.1	1197	slowpoke, isoform M
3R	NT_033777.3	24668862	24707410	+	42940	slo	Dmel_CG10693	NP_001014664.1	1175	slowpoke, isoform D
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001014661.2	1210	slowpoke, isoform R
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001163712.1	1210	slowpoke, isoform S
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001262927.1	1159	slowpoke, isoform W
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_733029.1	1183	slowpoke, isoform B
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001262926.1	1135	slowpoke, isoform V
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001262924.1	1217	slowpoke, isoform T
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_996289.1	1183	slowpoke, isoform C
3R	NT_033777.3	24669544	24707410	+	42940	slo	Dmel_CG10693	NP_001262928.1	1152	slowpoke, isoform X
3R	NT_033777.3	24712907	24712975	+	42941	CG13627	Dmel_CG13627	NP_001334700.1	22	uncharacterized protein Dmel_CG46316
3R	NT_033777.3	24713092	24717308	+	42941	CG13627	Dmel_CG13627	NP_001287509.1	611	uncharacterized protein Dmel_CG13627, isoform C
3R	NT_033777.3	24713092	24717308	+	42941	CG13627	Dmel_CG13627	NP_651279.1	697	uncharacterized protein Dmel_CG13627, isoform A
3R	NT_033777.3	24714978	24717308	+	42941	CG13627	Dmel_CG13627	NP_733032.2	697	uncharacterized protein Dmel_CG13627, isoform B
3R	NT_033777.3	24717618	24717904	+	42942	Rpb10	Dmel_CG13628	NP_651280.1	67	Rpb10
3R	NT_033777.3	24718030	24719281	-	42943	CG13630	Dmel_CG13630	NP_651281.1	374	uncharacterized protein Dmel_CG13630
3R	NT_033777.3	24727870	24748480	+	42944	tok	Dmel_CG6863	NP_733035.1	1464	tolkin, isoform B
3R	NT_033777.3	24727870	24748480	+	42944	tok	Dmel_CG6863	NP_476879.1	1464	tolkin, isoform A
3R	NT_033777.3	24727870	24748480	+	42944	tok	Dmel_CG6863	NP_001287510.1	1464	tolkin, isoform C
3R	NT_033777.3	24749796	24753420	+	42945	tld	Dmel_CG6868	NP_524487.2	1067	tolloid
3R	NT_033777.3	24754041	24760232	+	42946	asp	Dmel_CG6875	NP_524488.3	1954	abnormal spindle
3R	NT_033777.3	24761258	24761774	-	42947	AstA	Dmel_CG13633	NP_524489.2	151	allatostatin A, isoform A
3R	NT_033777.3	24761258	24761774	-	42947	AstA	Dmel_CG13633	NP_001287511.1	151	allatostatin A, isoform B
3R	NT_033777.3	24769522	24769773	+	50073	CG13631	Dmel_CG13631	NP_652252.1	83	uncharacterized protein Dmel_CG13631, isoform A
3R	NT_033777.3	24769522	24769773	+	50073	CG13631	Dmel_CG13631	NP_001287512.1	83	uncharacterized protein Dmel_CG13631, isoform B
3R	NT_033777.3	24775621	24784480	+	42948	CG42331	Dmel_CG42331	NP_651282.2	1615	uncharacterized protein Dmel_CG42331, isoform B
3R	NT_033777.3	24775621	24784480	+	42948	CG42331	Dmel_CG42331	NP_001189281.1	1615	uncharacterized protein Dmel_CG42331, isoform D
3R	NT_033777.3	24779972	24784480	+	42948	CG42331	Dmel_CG42331	NP_651283.1	1439	uncharacterized protein Dmel_CG42331, isoform C
3R	NT_033777.3	24785396	24786672	-	42950	CG5805	Dmel_CG5805	NP_001287513.1	339	CG5805, isoform B
3R	NT_033777.3	24785396	24786672	-	42950	CG5805	Dmel_CG5805	NP_651284.1	339	CG5805, isoform A
3R	NT_033777.3	24788246	24797239	+	42952	Ets96B	Dmel_CG6892	NP_651286.3	631	Ets96B, isoform C
3R	NT_033777.3	24788350	24789790	-	42951	CG13634	Dmel_CG13634	NP_651285.1	462	uncharacterized protein Dmel_CG13634
3R	NT_033777.3	24792725	24797239	+	42952	Ets96B	Dmel_CG6892	NP_996290.1	640	Ets96B, isoform B
3R	NT_033777.3	24797954	24799505	-	42953	Ude	Dmel_CG18410	NP_651287.4	316	Uracil-DNA degrading factor, isoform C
3R	NT_033777.3	24797954	24799505	-	42953	Ude	Dmel_CG18410	NP_001262929.1	316	Uracil-DNA degrading factor, isoform B
3R	NT_033777.3	24797954	24799505	-	42953	Ude	Dmel_CG18410	NP_001287514.1	316	Uracil-DNA degrading factor, isoform D
3R	NT_033777.3	24800034	24805172	-	42954	polybromo	Dmel_CG11375	NP_651288.1	1654	polybromo
3R	NT_033777.3	24805558	24813650	-	42956	lili	Dmel_CG5807	NP_001262930.1	519	lilipod, isoform B
3R	NT_033777.3	24806411	24813650	-	42956	lili	Dmel_CG5807	NP_651290.1	527	lilipod, isoform A
3R	NT_033777.3	24807686	24808568	+	42955	CG6980	Dmel_CG6980	NP_651289.1	250	CG6980
3R	NT_033777.3	24814277	24814864	+	4379863	CG34150	Dmel_CG34150	NP_001036756.2	137	uncharacterized protein Dmel_CG34150
3R	NT_033777.3	24814929	24816952	-	42957	CG5808	Dmel_CG5808	NP_651291.1	653	CG5808
3R	NT_033777.3	24817617	24821137	+	42958	Saf-B	Dmel_CG6995	NP_001262931.1	279	scaffold attachment factor B, isoform D
3R	NT_033777.3	24817617	24818863	+	42958	Saf-B	Dmel_CG6995	NP_001303447.1	270	scaffold attachment factor B, isoform E
3R	NT_033777.3	24817617	24818863	+	42958	Saf-B	Dmel_CG6995	NP_001303446.1	270	scaffold attachment factor B, isoform F
3R	NT_033777.3	24817617	24822166	+	42958	Saf-B	Dmel_CG6995	NP_733041.2	928	scaffold attachment factor B, isoform B
3R	NT_033777.3	24822401	24825383	-	42959	niki	Dmel_CG10951	NP_651293.1	841	nimA-like kinase
3R	NT_033777.3	24826989	24827959	-	42960	RabX4	Dmel_CG31118	NP_733043.1	213	RabX4
3R	NT_033777.3	24828670	24829854	-	326135	CG31357	Dmel_CG31357	NP_733044.1	394	uncharacterized protein Dmel_CG31357
3R	NT_033777.3	24830439	24830852	+	12798256	CG43273	Dmel_CG43273	NP_001247294.1	137	uncharacterized protein Dmel_CG43273, isoform A
3R	NT_033777.3	24830544	24830852	+	12798256	CG43273	Dmel_CG43273	NP_001303546.1	102	uncharacterized protein Dmel_CG43273, isoform C
3R	NT_033777.3	24837073	24839703	+	42961	sosie	Dmel_CG13636	NP_651295.1	186	sosie, isoform A
3R	NT_033777.3	24839357	24839703	+	42961	sosie	Dmel_CG13636	NP_733046.2	74	sosie, isoform B
3R	NT_033777.3	24839357	24839703	+	42961	sosie	Dmel_CG13636	NP_001247295.1	74	sosie, isoform C
3R	NT_033777.3	24840509	24841163	-	3772524	CG33658	Dmel_CG33658	NP_001027209.1	181	uncharacterized protein Dmel_CG33658
3R	NT_033777.3	24847238	24850233	+	42962	Esp	Dmel_CG7005	NP_001189282.1	654	epidermal stripes and patches, isoform B
3R	NT_033777.3	24847238	24850233	+	42962	Esp	Dmel_CG7005	NP_524490.2	654	epidermal stripes and patches, isoform A
3R	NT_033777.3	24850715	24851308	+	42963	CG7006	Dmel_CG7006	NP_651296.1	180	CG7006
3R	NT_033777.3	24851649	24854386	+	42964	nct	Dmel_CG7012	NP_001262932.1	699	nicastrin, isoform E
3R	NT_033777.3	24851649	24854237	+	42964	nct	Dmel_CG7012	NP_651297.2	695	nicastrin, isoform A
3R	NT_033777.3	24851649	24854090	+	42964	nct	Dmel_CG7012	NP_996291.2	692	nicastrin, isoform D
3R	NT_033777.3	24851649	24854237	+	42964	nct	Dmel_CG7012	NP_001163713.1	695	nicastrin, isoform C
3R	NT_033777.3	24855103	24856190	-	326120	HDAC11	Dmel_CG31119	NP_001247296.1	343	histone deacetylase 11, isoform B
3R	NT_033777.3	24855103	24856190	-	326120	HDAC11	Dmel_CG31119	NP_733048.1	343	histone deacetylase 11, isoform A
3R	NT_033777.3	24856457	24857512	-	42965	CG10899	Dmel_CG10899	NP_651298.1	279	uncharacterized protein Dmel_CG10899, isoform A
3R	NT_033777.3	24856457	24857215	-	42965	CG10899	Dmel_CG10899	NP_001247297.1	200	uncharacterized protein Dmel_CG10899, isoform C
3R	NT_033777.3	24857622	24859711	-	318593	ppk22	Dmel_CG31105	NP_733051.2	561	pickpocket 22, isoform B
3R	NT_033777.3	24859240	24859711	-	318593	ppk22	Dmel_CG31105	NP_001247298.1	135	pickpocket 22, isoform C
3R	NT_033777.3	24860111	24860320	-	12798257	CG13639	Dmel_CG13639	NP_001247299.1	69	uncharacterized protein Dmel_CG13639
3R	NT_033777.3	24861733	24862131	-	42967	CG13640	Dmel_CG13640	NP_651300.1	132	uncharacterized protein Dmel_CG13640
3R	NT_033777.3	24862981	24864069	+	42968	CG7016	Dmel_CG7016	NP_651301.1	362	CG7016
3R	NT_033777.3	24864278	24864706	-	42969	CG13641	Dmel_CG13641	NP_651302.1	142	uncharacterized protein Dmel_CG13641
3R	NT_033777.3	24865370	24866526	+	42970	Elal	Dmel_CG7021	NP_733055.1	309	Elastin-like, isoform B
3R	NT_033777.3	24865370	24866526	+	42970	Elal	Dmel_CG7021	NP_524491.1	329	Elastin-like, isoform A
3R	NT_033777.3	24865370	24866526	+	42970	Elal	Dmel_CG7021	NP_001262933.1	329	Elastin-like, isoform C
3R	NT_033777.3	24868801	24870528	-	42971	CycB3	Dmel_CG5814	NP_001262934.1	575	cyclin B3, isoform B
3R	NT_033777.3	24868801	24870528	-	42971	CycB3	Dmel_CG5814	NP_651303.2	575	cyclin B3, isoform A
3R	NT_033777.3	24871952	24875990	-	42972	CG3744	Dmel_CG3744	NP_651304.3	1042	CG3744, isoform F
3R	NT_033777.3	24871952	24875990	-	42972	CG3744	Dmel_CG3744	NP_996292.2	1042	CG3744, isoform E
3R	NT_033777.3	24871952	24875990	-	42972	CG3744	Dmel_CG3744	NP_733056.3	1102	CG3744, isoform G
3R	NT_033777.3	24871952	24875990	-	42972	CG3744	Dmel_CG3744	NP_001262935.1	1102	CG3744, isoform D
3R	NT_033777.3	24877352	24878785	+	192528	CG31381	Dmel_CG31381	NP_733057.1	477	uncharacterized protein Dmel_CG31381, isoform A
3R	NT_033777.3	24877352	24878785	+	192528	CG31381	Dmel_CG31381	NP_001189283.1	477	uncharacterized protein Dmel_CG31381, isoform B
3R	NT_033777.3	24879101	24881113	+	42973	CG11089	Dmel_CG11089	NP_001189286.1	590	uncharacterized protein Dmel_CG11089, isoform B
3R	NT_033777.3	24879101	24881113	+	42973	CG11089	Dmel_CG11089	NP_651305.1	590	uncharacterized protein Dmel_CG11089, isoform A
3R	NT_033777.3	24881602	24885138	-	42975	CG31121	Dmel_CG31121	NP_733059.1	911	uncharacterized protein Dmel_CG31121, isoform B
3R	NT_033777.3	24881602	24885138	-	42975	CG31121	Dmel_CG31121	NP_733058.1	911	uncharacterized protein Dmel_CG31121, isoform A
3R	NT_033777.3	24895112	24897532	+	42976	CG11069	Dmel_CG11069	NP_651307.2	604	uncharacterized protein Dmel_CG11069
3R	NT_033777.3	24898133	24905378	-	50074	CG13643	Dmel_CG13643	NP_001262936.1	807	uncharacterized protein Dmel_CG13643, isoform C
3R	NT_033777.3	24898133	24905378	-	50074	CG13643	Dmel_CG13643	NP_001262937.1	819	uncharacterized protein Dmel_CG13643, isoform D
3R	NT_033777.3	24898133	24905378	-	50074	CG13643	Dmel_CG13643	NP_001262938.1	806	uncharacterized protein Dmel_CG13643, isoform E
3R	NT_033777.3	24898133	24905378	-	50074	CG13643	Dmel_CG13643	NP_652253.1	807	uncharacterized protein Dmel_CG13643, isoform B
3R	NT_033777.3	24901223	24902614	+	42978	CG10845	Dmel_CG10845	NP_651309.2	463	uncharacterized protein Dmel_CG10845
3R	NT_033777.3	24913268	24917763	-	42979	PIG-S	Dmel_CG44255	NP_733060.1	536	phosphatidylinositol glycan anchor biosynthesis, class S
3R	NT_033777.3	24915954	24917763	-	19834718	sud1	Dmel_CG44254	NP_733061.1	536	sudestada1
3R	NT_033777.3	24918652	24922186	+	42981	CG11168	Dmel_CG11168	NP_001262940.1	849	uncharacterized protein Dmel_CG11168, isoform E
3R	NT_033777.3	24918652	24922186	+	42981	CG11168	Dmel_CG11168	NP_651311.2	863	uncharacterized protein Dmel_CG11168, isoform A
3R	NT_033777.3	24918652	24922186	+	42981	CG11168	Dmel_CG11168	NP_001262939.1	863	uncharacterized protein Dmel_CG11168, isoform D
3R	NT_033777.3	24918652	24920051	+	42981	CG11168	Dmel_CG11168	NP_001163715.2	332	uncharacterized protein Dmel_CG11168, isoform C
3R	NT_033777.3	24922572	24925013	+	42982	Mink	Dmel_CG11120	NP_651312.2	754	mitotic spindle and nuclear protein
3R	NT_033777.3	24925571	24926794	+	42983	Trf4-2	Dmel_CG17462	NP_651313.1	407	topoisomerase related function 4-2, isoform A
3R	NT_033777.3	24925571	24926794	+	42983	Trf4-2	Dmel_CG17462	NP_001262941.1	407	topoisomerase related function 4-2, isoform B
3R	NT_033777.3	24932133	24934382	+	42984	CG11771	Dmel_CG11771	NP_651314.1	730	uncharacterized protein Dmel_CG11771
3R	NT_033777.3	24935399	24937859	-	42985	Osbp	Dmel_CG6708	NP_477271.1	784	oxysterol binding protein
3R	NT_033777.3	24939429	24943649	-	42986	ssh	Dmel_CG6238	NP_733063.1	1193	slingshot, isoform B
3R	NT_033777.3	24939429	24944474	-	42986	ssh	Dmel_CG6238	NP_524492.2	1192	slingshot, isoform A
3R	NT_033777.3	24939802	24944474	-	42986	ssh	Dmel_CG6238	NP_001163717.1	1045	slingshot, isoform D
3R	NT_033777.3	24939802	24943649	-	42986	ssh	Dmel_CG6238	NP_001163716.1	1046	slingshot, isoform C
3R	NT_033777.3	24945258	24947304	+	42987	Nmnat	Dmel_CG13645	NP_651315.2	389	nicotinamide mononucleotide adenylyltransferase, isoform A
3R	NT_033777.3	24945258	24946512	+	42987	Nmnat	Dmel_CG13645	NP_733064.2	297	nicotinamide mononucleotide adenylyltransferase, isoform B
3R	NT_033777.3	24945351	24947304	+	42987	Nmnat	Dmel_CG13645	NP_001262942.1	358	nicotinamide mononucleotide adenylyltransferase, isoform C
3R	NT_033777.3	24947632	24949539	+	42988	CG13646	Dmel_CG13646	NP_651316.1	527	uncharacterized protein Dmel_CG13646
3R	NT_033777.3	25001406	25021359	+	42990	tnc	Dmel_CG13648	NP_651318.3	2819	tenectin, isoform C
3R	NT_033777.3	25001406	25021359	+	42990	tnc	Dmel_CG13648	NP_001247300.1	2819	tenectin, isoform D
3R	NT_033777.3	25023370	25024466	+	42991	beta4GalT7	Dmel_CG11780	NP_651319.2	322	beta-4-galactosyltransferase 7
3R	NT_033777.3	25024535	25024932	-	42992	CG11781	Dmel_CG11781	NP_651320.1	113	uncharacterized protein Dmel_CG11781
3R	NT_033777.3	25025544	25028998	+	42993	Hr96	Dmel_CG11783	NP_524493.1	723	hormone receptor-like in 96
3R	NT_033777.3	25029779	25033352	-	42994	Smg6	Dmel_CG6369	NP_651321.1	948	Smg6
3R	NT_033777.3	25034582	25038863	-	42995	CG6422	Dmel_CG6422	NP_001262943.1	700	CG6422, isoform D
3R	NT_033777.3	25034582	25038863	-	42995	CG6422	Dmel_CG6422	NP_651322.1	700	CG6422, isoform A
3R	NT_033777.3	25034582	25038553	-	42995	CG6422	Dmel_CG6422	NP_733067.1	699	CG6422, isoform B
3R	NT_033777.3	25034582	25038674	-	42995	CG6422	Dmel_CG6422	NP_001097905.1	694	CG6422, isoform C
3R	NT_033777.3	25036987	25037917	+	318597	CG31115	Dmel_CG31115	NP_733068.2	290	uncharacterized protein Dmel_CG31115
3R	NT_033777.3	25039450	25040333	+	42996	bai	Dmel_CG11785	NP_651323.3	206	baiser
3R	NT_033777.3	25040601	25045049	-	326119	5PtaseI	Dmel_CG42283	NP_001138109.1	786	5PtaseI, isoform F
3R	NT_033777.3	25040819	25045049	-	326119	5PtaseI	Dmel_CG42283	NP_733069.1	400	5PtaseI, isoform B
3R	NT_033777.3	25041728	25045049	-	326119	5PtaseI	Dmel_CG42283	NP_001138108.1	699	5PtaseI, isoform C
3R	NT_033777.3	25046373	25047360	+	42998	CG11786	Dmel_CG11786	NP_001097906.1	222	uncharacterized protein Dmel_CG11786
3R	NT_033777.3	25047786	25049434	+	42999	CG11790	Dmel_CG11790	NP_651326.1	302	uncharacterized protein Dmel_CG11790, isoform A
3R	NT_033777.3	25047786	25048888	+	42999	CG11790	Dmel_CG11790	NP_001262944.1	251	uncharacterized protein Dmel_CG11790, isoform C
3R	NT_033777.3	25048063	25049434	+	42999	CG11790	Dmel_CG11790	NP_733071.1	245	uncharacterized protein Dmel_CG11790, isoform B
3R	NT_033777.3	25051164	25052635	+	43000	CG11791	Dmel_CG11791	NP_651327.1	181	uncharacterized protein Dmel_CG11791, isoform A
3R	NT_033777.3	25051314	25052635	+	43000	CG11791	Dmel_CG11791	NP_001097907.1	131	uncharacterized protein Dmel_CG11791, isoform C
3R	NT_033777.3	25051314	25052635	+	43000	CG11791	Dmel_CG11791	NP_001262945.1	131	uncharacterized protein Dmel_CG11791, isoform D
3R	NT_033777.3	25051314	25052635	+	43000	CG11791	Dmel_CG11791	NP_733072.1	131	uncharacterized protein Dmel_CG11791, isoform B
3R	NT_033777.3	25053596	25054499	-	43001	CG31109	Dmel_CG31109	NP_733073.1	198	uncharacterized protein Dmel_CG31109, isoform A
3R	NT_033777.3	25053596	25054499	-	43001	CG31109	Dmel_CG31109	NP_001262946.1	198	uncharacterized protein Dmel_CG31109, isoform B
3R	NT_033777.3	25055138	25056097	-	318595	CG31111	Dmel_CG31111	NP_733074.1	269	uncharacterized protein Dmel_CG31111
3R	NT_033777.3	25056446	25064269	+	43002	stac	Dmel_CG34349	NP_001262947.1	1143	staccato, isoform E
3R	NT_033777.3	25057100	25064269	+	43002	stac	Dmel_CG34349	NP_651329.4	1153	staccato, isoform C
3R	NT_033777.3	25059270	25064269	+	43002	stac	Dmel_CG34349	NP_001097909.2	1128	staccato, isoform D
3R	NT_033777.3	25064647	25065514	-	43003	veli	Dmel_CG7662	NP_651330.1	195	veli, isoform A
3R	NT_033777.3	25064647	25065514	-	43003	veli	Dmel_CG7662	NP_733076.2	246	veli, isoform C
3R	NT_033777.3	25065878	25066633	+	43004	PQBP1	Dmel_CG11820	NP_651331.1	231	Poly-glutamine tract binding protein 1
3R	NT_033777.3	25067007	25069554	-	43005	OstStt3	Dmel_CG7748	NP_524494.1	774	oligosaccharyl transferase 3
3R	NT_033777.3	25069965	25070881	+	43006	CG11839	Dmel_CG11839	NP_733077.3	254	uncharacterized protein Dmel_CG11839
3R	NT_033777.3	25071574	25072598	+	43007	CG11836	Dmel_CG11836	NP_001163718.3	281	uncharacterized protein Dmel_CG11836, isoform I
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_001189292.1	223	uncharacterized protein Dmel_CG11836, isoform F
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_001097910.1	223	uncharacterized protein Dmel_CG11836, isoform C
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_001189291.1	223	uncharacterized protein Dmel_CG11836, isoform E
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_733078.1	223	uncharacterized protein Dmel_CG11836, isoform B
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_001189290.1	223	uncharacterized protein Dmel_CG11836, isoform G
3R	NT_033777.3	25071810	25072598	+	43007	CG11836	Dmel_CG11836	NP_651333.1	223	uncharacterized protein Dmel_CG11836, isoform A
3R	NT_033777.3	25072890	25074361	-	43008	shams	Dmel_CG9996	NP_001097911.1	362	shams
3R	NT_033777.3	25074937	25076327	+	43009	CG11920	Dmel_CG11920	NP_651335.2	298	uncharacterized protein Dmel_CG11920
3R	NT_033777.3	25083552	25084670	+	43010	fd96Ca	Dmel_CG11921	NP_001287516.1	372	forkhead domain 96Ca, isoform B
3R	NT_033777.3	25083552	25084670	+	43010	fd96Ca	Dmel_CG11921	NP_524495.1	372	forkhead domain 96Ca, isoform A
3R	NT_033777.3	25095118	25095933	+	43011	fd96Cb	Dmel_CG11922	NP_524496.1	271	forkhead domain 96Cb
3R	NT_033777.3	25098006	25099279	+	43012	CG33095	Dmel_CG33095	NP_001163719.1	286	uncharacterized protein Dmel_CG33096, isoform E
3R	NT_033777.3	25098006	25099279	+	43012	CG33095	Dmel_CG33095	NP_788737.1	286	uncharacterized protein Dmel_CG33096, isoform C
3R	NT_033777.3	25098006	25099279	+	43012	CG33095	Dmel_CG33095	NP_001287518.1	286	uncharacterized protein Dmel_CG33096, isoform G
3R	NT_033777.3	25098006	25099279	+	43012	CG33095	Dmel_CG33095	NP_788736.2	286	uncharacterized protein Dmel_CG33096, isoform D
3R	NT_033777.3	25098006	25099279	+	43012	CG33095	Dmel_CG33095	NP_001287517.1	286	uncharacterized protein Dmel_CG33096, isoform F
3R	NT_033777.3	25100130	25101746	+	43012	CG33095	Dmel_CG33095	NP_001027210.1	538	uncharacterized protein Dmel_CG33095, isoform B
3R	NT_033777.3	25100130	25101746	+	43012	CG33095	Dmel_CG33095	NP_788738.1	538	uncharacterized protein Dmel_CG33095, isoform A
3R	NT_033777.3	25102567	25103607	+	19835207	CG45095	Dmel_CG45095	NP_001287519.1	346	uncharacterized protein Dmel_CG45095
3R	NT_033777.3	25103670	25109032	-	3885585	CG34027	Dmel_CG34027	NP_001034068.2	1519	uncharacterized protein Dmel_CG34027
3R	NT_033777.3	25109370	25112170	-	43014	CG13650	Dmel_CG13650	NP_001097912.1	752	uncharacterized protein Dmel_CG13650
3R	NT_033777.3	25113208	25116149	-	43015	CG31108	Dmel_CG31108	NP_733081.1	917	uncharacterized protein Dmel_CG31108, isoform A
3R	NT_033777.3	25113208	25116149	-	43015	CG31108	Dmel_CG31108	NP_001287520.1	917	uncharacterized protein Dmel_CG31108, isoform B
3R	NT_033777.3	25117577	25121029	-	326146	CG31510	Dmel_CG31510	NP_733082.1	1150	uncharacterized protein Dmel_CG31510
3R	NT_033777.3	25123399	25125356	+	43016	vig2	Dmel_CG11844	NP_733083.1	443	vig2, isoform B
3R	NT_033777.3	25123644	25125356	+	43016	vig2	Dmel_CG11844	NP_733084.1	412	vig2, isoform A
3R	NT_033777.3	25123644	25125356	+	43016	vig2	Dmel_CG11844	NP_001097913.1	412	vig2, isoform D
3R	NT_033777.3	25123644	25125356	+	43016	vig2	Dmel_CG11844	NP_733085.1	412	vig2, isoform C
3R	NT_033777.3	25125652	25127063	-	8674021	CG42503	Dmel_CG42503	NP_651340.1	367	molybdenum cofactor synthesis 2
3R	NT_033777.3	25127074	25127346	-	8674021	CG42503	Dmel_CG42503	NP_001163720.1	90	uncharacterized protein Dmel_CG42503
3R	NT_033777.3	25127811	25131045	+	43018	Clbn	Dmel_CG11847	NP_651341.2	992	caliban, isoform C
3R	NT_033777.3	25127811	25131045	+	43018	Clbn	Dmel_CG11847	NP_001163721.1	992	caliban, isoform B
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001163725.1	828	Band4.1 inhibitor LRP interactor, isoform F
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001163722.1	828	Band4.1 inhibitor LRP interactor, isoform C
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001163724.1	828	Band4.1 inhibitor LRP interactor, isoform E
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001287521.1	828	Band4.1 inhibitor LRP interactor, isoform H
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001163723.1	828	Band4.1 inhibitor LRP interactor, isoform D
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_651342.3	828	Band4.1 inhibitor LRP interactor, isoform B
3R	NT_033777.3	25132595	25135656	+	43019	Bili	Dmel_CG11848	NP_001163726.1	828	Band4.1 inhibitor LRP interactor, isoform G
3R	NT_033777.3	25138233	25139492	+	43020	danr	Dmel_CG13651	NP_651343.1	419	distal antenna-related
3R	NT_033777.3	25169608	25193654	-	4379864	lobo	Dmel_CG34110	NP_001036757.1	897	lost boys
3R	NT_033777.3	25189939	25191975	+	43023	dan	Dmel_CG11849	NP_001262949.1	678	distal antenna, isoform C
3R	NT_033777.3	25189939	25191975	+	43023	dan	Dmel_CG11849	NP_651346.1	678	distal antenna, isoform A
3R	NT_033777.3	25189939	25192284	+	43023	dan	Dmel_CG11849	NP_001262948.1	781	distal antenna, isoform B
3R	NT_033777.3	25195560	25196335	+	43025	CG13653	Dmel_CG13653	NP_651348.1	235	uncharacterized protein Dmel_CG13653
3R	NT_033777.3	25197979	25207048	-	43026	Cad96Ca	Dmel_CG10244	NP_651349.1	773	cadherin 96Ca
3R	NT_033777.3	25199999	25213649	+	43028	CG13654	Dmel_CG13654	NP_651350.2	993	uncharacterized protein Dmel_CG13654, isoform A
3R	NT_033777.3	25210325	25213649	+	43028	CG13654	Dmel_CG13654	NP_001287522.1	967	uncharacterized protein Dmel_CG13654, isoform B
3R	NT_033777.3	25210325	25213649	+	43028	CG13654	Dmel_CG13654	NP_001287523.1	967	uncharacterized protein Dmel_CG13654, isoform C
3R	NT_033777.3	25214543	25215138	-	43029	CG13663	Dmel_CG13663	NP_651351.1	177	uncharacterized protein Dmel_CG13663
3R	NT_033777.3	25216365	25218642	+	318594	CG31106	Dmel_CG31106	NP_733086.2	513	uncharacterized protein Dmel_CG31106
3R	NT_033777.3	25219347	25221373	+	43030	CG31103	Dmel_CG31103	NP_001097914.1	506	uncharacterized protein Dmel_CG31103
3R	NT_033777.3	25221702	25223740	+	43031	CG11851	Dmel_CG11851	NP_651353.1	623	uncharacterized protein Dmel_CG11851
3R	NT_033777.3	25224383	25230693	-	43033	Cad96Cb	Dmel_CG13664	NP_651355.3	786	cadherin 96Cb, isoform B
3R	NT_033777.3	25224383	25230693	-	43033	Cad96Cb	Dmel_CG13664	NP_001287524.1	789	cadherin 96Cb, isoform D
3R	NT_033777.3	25224383	25230693	-	43033	Cad96Cb	Dmel_CG13664	NP_001163727.1	785	cadherin 96Cb, isoform C
3R	NT_033777.3	25234045	25235397	-	43034	CG10420	Dmel_CG10420	NP_651356.1	429	uncharacterized protein Dmel_CG10420
3R	NT_033777.3	25237713	25238702	+	43035	CG11852	Dmel_CG11852	NP_651357.1	250	uncharacterized protein Dmel_CG11852
3R	NT_033777.3	25240190	25241175	+	43036	to	Dmel_CG11853	NP_001287525.1	249	takeout, isoform B
3R	NT_033777.3	25240190	25241175	+	43036	to	Dmel_CG11853	NP_524497.1	249	takeout, isoform A
3R	NT_033777.3	25242058	25243014	+	43037	CG11854	Dmel_CG11854	NP_651358.4	250	uncharacterized protein Dmel_CG11854
3R	NT_033777.3	25243523	25244976	-	43038	bam	Dmel_CG10422	NP_476800.1	442	bag of marbles
3R	NT_033777.3	25246353	25247438	-	43039	RpS27	Dmel_CG10423	NP_001247301.1	84	ribosomal protein S27, isoform B
3R	NT_033777.3	25246353	25247438	-	43039	RpS27	Dmel_CG10423	NP_651359.1	84	ribosomal protein S27, isoform A
3R	NT_033777.3	25247963	25249048	+	43040	Nup37	Dmel_CG11875	NP_651360.1	320	nucleoporin 37kD, isoform A
3R	NT_033777.3	25247963	25249048	+	43040	Nup37	Dmel_CG11875	NP_001262950.1	320	nucleoporin 37kD, isoform B
3R	NT_033777.3	25249631	25258559	+	43041	Nup358	Dmel_CG11856	NP_651361.2	2695	nucleoporin 358kD, isoform A
3R	NT_033777.3	25249631	25258559	+	43041	Nup358	Dmel_CG11856	NP_001247302.1	2718	nucleoporin 358kD, isoform B
3R	NT_033777.3	25259364	25260036	+	43042	CG11857	Dmel_CG11857	NP_651362.1	203	uncharacterized protein Dmel_CG11857, isoform A
3R	NT_033777.3	25259364	25260222	+	43042	CG11857	Dmel_CG11857	NP_001303417.1	265	uncharacterized protein Dmel_CG11857, isoform C
3R	NT_033777.3	25261256	25262400	-	43043	CG10425	Dmel_CG10425	NP_651363.1	336	uncharacterized protein Dmel_CG10425
3R	NT_033777.3	25262810	25263261	+	43044	CG11858	Dmel_CG11858	NP_651364.1	130	uncharacterized protein Dmel_CG11858
3R	NT_033777.3	25263338	25265674	-	45786	GlnRS	Dmel_CG10506	NP_524841.1	778	Glutaminyl-tRNA synthetase
3R	NT_033777.3	25265907	25267686	+	43046	RIOK2	Dmel_CG11859	NP_651365.1	538	RIO kinase 2
3R	NT_033777.3	25270231	25271542	+	3772506	CG11889	Dmel_CG11889	NP_001287526.1	417	uncharacterized protein Dmel_CG11889, isoform B
3R	NT_033777.3	25270231	25271542	+	3772506	CG11889	Dmel_CG11889	NP_651367.1	417	uncharacterized protein Dmel_CG11889, isoform A
3R	NT_033777.3	25271874	25273185	+	3772506	CG11889	Dmel_CG11889	NP_001334701.1	417	uncharacterized protein Dmel_CG11891, isoform G
3R	NT_033777.3	25271874	25273185	+	3772506	CG11889	Dmel_CG11889	NP_001027211.3	417	uncharacterized protein Dmel_CG11891, isoform F
3R	NT_033777.3	25273848	25275166	+	43050	CG11878	Dmel_CG11878	NP_651369.1	420	uncharacterized protein Dmel_CG11878
3R	NT_033777.3	25275861	25277194	-	43051	CG10513	Dmel_CG10513	NP_651370.2	422	uncharacterized protein Dmel_CG10513
3R	NT_033777.3	25278505	25279808	-	43052	CG10514	Dmel_CG10514	NP_651371.1	413	uncharacterized protein Dmel_CG10514
3R	NT_033777.3	25281706	25283092	+	43053	CG11892	Dmel_CG11892	NP_651372.1	439	uncharacterized protein Dmel_CG11892, isoform B
3R	NT_033777.3	25281706	25283092	+	43053	CG11892	Dmel_CG11892	NP_733089.1	439	uncharacterized protein Dmel_CG11892, isoform A
3R	NT_033777.3	25283691	25285090	+	326132	CG31300	Dmel_CG31300	NP_651373.2	422	uncharacterized protein Dmel_CG31300
3R	NT_033777.3	25285533	25286915	+	43054	CG31104	Dmel_CG31104	NP_733090.1	420	uncharacterized protein Dmel_CG31104
3R	NT_033777.3	25287485	25288876	+	43055	CG13658	Dmel_CG13658	NP_651374.2	422	uncharacterized protein Dmel_CG13658
3R	NT_033777.3	25289927	25291240	+	43056	CG11893	Dmel_CG11893	NP_651375.1	416	uncharacterized protein Dmel_CG11893
3R	NT_033777.3	25291496	25292870	-	43057	CG31098	Dmel_CG31098	NP_733091.1	417	uncharacterized protein Dmel_CG31098
3R	NT_033777.3	25293658	25295301	-	326118	CG31102	Dmel_CG31102	NP_001262951.1	420	uncharacterized protein Dmel_CG31102, isoform B
3R	NT_033777.3	25293658	25295301	-	326118	CG31102	Dmel_CG31102	NP_733092.2	416	uncharacterized protein Dmel_CG31102, isoform A
3R	NT_033777.3	25296338	25297774	-	43058	CG31097	Dmel_CG31097	NP_733093.2	420	uncharacterized protein Dmel_CG31097
3R	NT_033777.3	25297993	25299500	-	318664	CG31288	Dmel_CG31288	NP_733094.1	428	uncharacterized protein Dmel_CG31288
3R	NT_033777.3	25300911	25302290	+	43059	CG13659	Dmel_CG13659	NP_651378.1	417	uncharacterized protein Dmel_CG13659
3R	NT_033777.3	25302561	25303866	+	43060	CG31370	Dmel_CG31370	NP_733095.2	396	uncharacterized protein Dmel_CG31370
3R	NT_033777.3	25304214	25305589	+	318734	CG31436	Dmel_CG31436	NP_733096.1	420	uncharacterized protein Dmel_CG31436
3R	NT_033777.3	25306505	25307902	-	43061	CG10550	Dmel_CG10550	NP_651380.2	425	uncharacterized protein Dmel_CG10550, isoform D
3R	NT_033777.3	25306505	25307902	-	43061	CG10550	Dmel_CG10550	NP_733098.1	425	uncharacterized protein Dmel_CG10550, isoform C
3R	NT_033777.3	25306505	25307902	-	43061	CG10550	Dmel_CG10550	NP_733097.1	425	uncharacterized protein Dmel_CG10550, isoform B
3R	NT_033777.3	25309536	25310852	-	326117	CG31099	Dmel_CG31099	NP_733099.1	400	uncharacterized protein Dmel_CG31099
3R	NT_033777.3	25311138	25312653	-	43062	CG31087	Dmel_CG31087	NP_001262952.1	417	uncharacterized protein Dmel_CG31087, isoform B
3R	NT_033777.3	25311138	25312653	-	43062	CG31087	Dmel_CG31087	NP_733100.1	417	uncharacterized protein Dmel_CG31087, isoform A
3R	NT_033777.3	25314669	25316104	-	43063	CG10559	Dmel_CG10559	NP_651382.2	415	uncharacterized protein Dmel_CG10559
3R	NT_033777.3	25316621	25318074	-	43064	CG10553	Dmel_CG10553	NP_651383.1	414	uncharacterized protein Dmel_CG10553
3R	NT_033777.3	25318627	25320056	-	43065	CG10560	Dmel_CG10560	NP_651384.2	414	uncharacterized protein Dmel_CG10560
3R	NT_033777.3	25321283	25322678	-	43066	CG10562	Dmel_CG10562	NP_651385.3	405	uncharacterized protein Dmel_CG10562
3R	NT_033777.3	25323305	25329235	-	43067	CHKov1	Dmel_CG10618	NP_001097918.1	410	CHKov1
3R	NT_033777.3	25329693	25331146	-	43068	CHKov2	Dmel_CG10675	NP_651387.1	409	CHKov2
3R	NT_033777.3	25331775	25335147	-	43069	CG10669	Dmel_CG10669	NP_651388.1	933	uncharacterized protein Dmel_CG10669, isoform A
3R	NT_033777.3	25331775	25335147	-	43069	CG10669	Dmel_CG10669	NP_001163728.1	933	uncharacterized protein Dmel_CG10669, isoform B
3R	NT_033777.3	25335400	25339911	+	43070	CG11902	Dmel_CG11902	NP_651389.3	1426	uncharacterized protein Dmel_CG11902
3R	NT_033777.3	25340419	25344716	+	43071	rha	Dmel_CG11908	NP_651390.2	1332	rha
3R	NT_033777.3	25344856	25346886	-	43072	tobi	Dmel_CG11909	NP_651391.1	657	target of brain insulin
3R	NT_033777.3	25347603	25397494	-	47220	Fur1	Dmel_CG10772	NP_733102.1	1101	furin 1, isoform A
3R	NT_033777.3	25347603	25397494	-	47220	Fur1	Dmel_CG10772	NP_001262954.1	1478	furin 1, isoform J
3R	NT_033777.3	25352007	25397494	-	47220	Fur1	Dmel_CG10772	NP_996294.2	892	furin 1, isoform I
3R	NT_033777.3	25352007	25397494	-	47220	Fur1	Dmel_CG10772	NP_524885.1	1269	furin 1, isoform B
3R	NT_033777.3	25352007	25397494	-	47220	Fur1	Dmel_CG10772	NP_733104.1	892	furin 1, isoform D
3R	NT_033777.3	25352007	25397494	-	47220	Fur1	Dmel_CG10772	NP_996293.1	892	furin 1, isoform F
3R	NT_033777.3	25352007	25397494	-	47220	Fur1	Dmel_CG10772	NP_733103.1	892	furin 1, isoform C
3R	NT_033777.3	25353766	25397494	-	47220	Fur1	Dmel_CG10772	NP_001262953.1	864	furin 1, isoform H
3R	NT_033777.3	25358308	25359929	+	43073	ND-49L	Dmel_CG11913	NP_651392.2	523	NADH dehydrogenase (ubiquinone) 49 kDa subunit-like
3R	NT_033777.3	25381257	25382672	-	43074	alrm	Dmel_CG11910	NP_651393.1	471	astrocytic leucine-rich repeat molecule
3R	NT_033777.3	25383716	25384585	+	318735	CG31437	Dmel_CG31437	NP_733105.1	265	uncharacterized protein Dmel_CG31437
3R	NT_033777.3	25384803	25397494	-	47220	Fur1	Dmel_CG10772	NP_001262955.1	285	furin 1, isoform G
3R	NT_033777.3	25397911	25400618	-	318737	Muc96D	Dmel_CG31439	NP_733106.2	881	mucin 96D
3R	NT_033777.3	25473516	25475614	+	43077	Vps33B	Dmel_CG5127	NP_651395.1	640	vacuolar protein sorting 33B
3R	NT_033777.3	25475762	25476853	-	43078	CG4553	Dmel_CG4553	NP_651396.1	363	CG4553
3R	NT_033777.3	25477102	25477671	+	43079	MED28	Dmel_CG5121	NP_651397.1	189	mediator complex subunit 28
3R	NT_033777.3	25478256	25482345	-	43080	XNP	Dmel_CG4548	NP_651398.1	1311	XNP, isoform B
3R	NT_033777.3	25478256	25481550	-	43080	XNP	Dmel_CG4548	NP_001287528.1	1046	XNP, isoform D
3R	NT_033777.3	25478256	25481550	-	43080	XNP	Dmel_CG4548	NP_001287527.1	1046	XNP, isoform C
3R	NT_033777.3	25478256	25482345	-	43080	XNP	Dmel_CG4548	NP_733107.1	1311	XNP, isoform A
3R	NT_033777.3	25483166	25483532	+	8674037	CG42488	Dmel_CG42488	NP_001163729.1	103	uncharacterized protein Dmel_CG42488
3R	NT_033777.3	25483562	25485313	+	8674037	CG42488	Dmel_CG42488	NP_001287529.1	526	CG5116, isoform B
3R	NT_033777.3	25483562	25485313	+	8674037	CG42488	Dmel_CG42488	NP_651399.2	526	CG5116, isoform A
3R	NT_033777.3	25486355	25489088	-	53586	Dhap-at	Dmel_CG4625	NP_001262957.1	807	dihydroxyacetone phosphate acyltransferase, isoform C
3R	NT_033777.3	25486604	25489088	-	53586	Dhap-at	Dmel_CG4625	NP_525010.1	724	dihydroxyacetone phosphate acyltransferase, isoform A
3R	NT_033777.3	25486604	25489088	-	53586	Dhap-at	Dmel_CG4625	NP_001262956.1	724	dihydroxyacetone phosphate acyltransferase, isoform B
3R	NT_033777.3	25491558	25493129	+	43083	CG5112	Dmel_CG5112	NP_651400.1	523	CG5112
3R	NT_033777.3	25494015	25494411	-	2768686	CG33494	Dmel_CG33494	NP_996295.1	86	uncharacterized protein Dmel_CG33494, isoform A
3R	NT_033777.3	25494015	25494411	-	2768686	CG33494	Dmel_CG33494	NP_001262958.1	86	uncharacterized protein Dmel_CG33494, isoform B
3R	NT_033777.3	25505217	25505918	+	43084	CG5107	Dmel_CG5107	NP_651401.1	213	CG5107
3R	NT_033777.3	25506364	25508208	+	43085	CG5111	Dmel_CG5111	NP_651402.1	614	CG5111
3R	NT_033777.3	25519623	25600747	+	43087	msi	Dmel_CG5099	NP_733108.2	634	musashi, isoform B
3R	NT_033777.3	25519623	25600747	+	43087	msi	Dmel_CG5099	NP_001262959.1	618	musashi, isoform E
3R	NT_033777.3	25519623	25600747	+	43087	msi	Dmel_CG5099	NP_001247304.1	605	musashi, isoform D
3R	NT_033777.3	25519623	25600747	+	43087	msi	Dmel_CG5099	NP_001247303.1	634	musashi, isoform C
3R	NT_033777.3	25519623	25600747	+	43087	msi	Dmel_CG5099	NP_001262960.1	634	musashi, isoform F
3R	NT_033777.3	25581467	25582964	-	43086	CG4582	Dmel_CG4582	NP_651403.1	432	CG4582
3R	NT_033777.3	25591965	25609031	-	43088	ymp	Dmel_CG12250	NP_001287531.1	186	yellow-emperor, isoform D
3R	NT_033777.3	25592185	25609031	-	43088	ymp	Dmel_CG12250	NP_001287530.1	173	yellow-emperor, isoform C
3R	NT_033777.3	25592372	25609031	-	43088	ymp	Dmel_CG12250	NP_651404.1	139	yellow-emperor, isoform A
3R	NT_033777.3	25593343	25609031	-	43088	ymp	Dmel_CG12250	NP_733109.1	146	yellow-emperor, isoform B
3R	NT_033777.3	25594964	25600747	+	43087	msi	Dmel_CG5099	NP_524577.1	606	musashi, isoform A
3R	NT_033777.3	25595081	25600747	+	43087	msi	Dmel_CG5099	NP_001262961.1	567	musashi, isoform H
3R	NT_033777.3	25611290	25623579	-	43091	Npl4	Dmel_CG4673	NP_651407.3	652	nuclear protein localization 4, isoform A
3R	NT_033777.3	25611290	25624606	-	43091	Npl4	Dmel_CG4673	NP_733110.2	624	nuclear protein localization 4, isoform B
3R	NT_033777.3	25611290	25624606	-	43091	Npl4	Dmel_CG4673	NP_001163731.1	624	nuclear protein localization 4, isoform D
3R	NT_033777.3	25613866	25614312	+	43089	CG5079	Dmel_CG5079	NP_651405.1	148	CG5079
3R	NT_033777.3	25618479	25620521	+	43090	CG5071	Dmel_CG5071	NP_001303432.1	680	CG5071, isoform D
3R	NT_033777.3	25618479	25620072	+	43090	CG5071	Dmel_CG5071	NP_733111.1	509	CG5071, isoform A
3R	NT_033777.3	25618479	25620521	+	43090	CG5071	Dmel_CG5071	NP_651406.1	680	CG5071, isoform B
3R	NT_033777.3	25618479	25620072	+	43090	CG5071	Dmel_CG5071	NP_001247305.1	508	CG5071, isoform C
3R	NT_033777.3	25624932	25626637	-	43092	Ssadh	Dmel_CG4685	NP_001163732.1	509	succinic semialdehyde dehydrogenase, isoform E
3R	NT_033777.3	25624932	25626637	-	43092	Ssadh	Dmel_CG4685	NP_001014665.1	509	succinic semialdehyde dehydrogenase, isoform D
3R	NT_033777.3	25624932	25626637	-	43092	Ssadh	Dmel_CG4685	NP_651408.1	509	succinic semialdehyde dehydrogenase, isoform A
3R	NT_033777.3	25624932	25626637	-	43092	Ssadh	Dmel_CG4685	NP_001014666.1	509	succinic semialdehyde dehydrogenase, isoform C
3R	NT_033777.3	25624932	25626637	-	43092	Ssadh	Dmel_CG4685	NP_001014667.1	509	succinic semialdehyde dehydrogenase, isoform B
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_733112.1	336	jing interacting gene regulatory 1, isoform A
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_001334702.1	336	jing interacting gene regulatory 1, isoform H
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_651409.1	336	jing interacting gene regulatory 1, isoform B
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_001097920.1	336	jing interacting gene regulatory 1, isoform E
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_001097921.1	336	jing interacting gene regulatory 1, isoform F
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_733114.1	336	jing interacting gene regulatory 1, isoform D
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_001262962.1	336	jing interacting gene regulatory 1, isoform G
3R	NT_033777.3	25648899	25650047	+	43093	jigr1	Dmel_CG17383	NP_733113.1	336	jing interacting gene regulatory 1, isoform C
3R	NT_033777.3	25653515	25660787	-	43095	Tnks	Dmel_CG4719	NP_001262963.1	1520	tankyrase, isoform B
3R	NT_033777.3	25654532	25660787	-	43095	Tnks	Dmel_CG4719	NP_651410.1	1181	tankyrase, isoform A
3R	NT_033777.3	25662415	25664655	+	43096	RASSF8	Dmel_CG5053	NP_651411.1	607	Ras association domain family member 8
3R	NT_033777.3	25667155	25677030	+	43098	Lgr3	Dmel_CG31096	NP_733115.1	765	Leucine-rich repeat-containing G protein-coupled receptor 3
3R	NT_033777.3	25677298	25678363	-	43099	CG4730	Dmel_CG4730	NP_001262964.1	334	CG4730, isoform B
3R	NT_033777.3	25677298	25678537	-	43099	CG4730	Dmel_CG4730	NP_651413.1	392	CG4730, isoform A
3R	NT_033777.3	25677298	25678537	-	43099	CG4730	Dmel_CG4730	NP_001262965.1	392	CG4730, isoform C
3R	NT_033777.3	25678777	25679240	+	43100	CG5039	Dmel_CG5039	NP_651414.1	111	CG5039
3R	NT_033777.3	25679366	25680486	-	43101	CG4743	Dmel_CG4743	NP_651415.1	297	CG4743
3R	NT_033777.3	25680967	25682435	+	43102	CG5028	Dmel_CG5028	NP_001097924.1	393	CG5028, isoform D
3R	NT_033777.3	25680967	25683473	+	43102	CG5028	Dmel_CG5028	NP_001097923.1	392	CG5028, isoform C
3R	NT_033777.3	25680967	25683088	+	43102	CG5028	Dmel_CG5028	NP_651416.1	402	CG5028, isoform A
3R	NT_033777.3	25680967	25683088	+	43102	CG5028	Dmel_CG5028	NP_001097922.1	402	CG5028, isoform B
3R	NT_033777.3	25684095	25684502	-	43103	RpL27	Dmel_CG4759	NP_001262967.1	135	ribosomal protein L27, isoform C
3R	NT_033777.3	25684095	25684502	-	43103	RpL27	Dmel_CG4759	NP_651417.1	135	ribosomal protein L27, isoform A
3R	NT_033777.3	25684095	25684502	-	43103	RpL27	Dmel_CG4759	NP_001262968.1	135	ribosomal protein L27, isoform D
3R	NT_033777.3	25684095	25684502	-	43103	RpL27	Dmel_CG4759	NP_001262966.1	135	ribosomal protein L27, isoform B
3R	NT_033777.3	25685385	25686815	-	43104	CLS	Dmel_CG4774	NP_733117.1	322	cardiolipin synthase, isoform C
3R	NT_033777.3	25685385	25686815	-	43104	CLS	Dmel_CG4774	NP_001262969.1	322	cardiolipin synthase, isoform D
3R	NT_033777.3	25685385	25686815	-	43104	CLS	Dmel_CG4774	NP_651418.1	322	cardiolipin synthase, isoform A
3R	NT_033777.3	25685385	25686815	-	43104	CLS	Dmel_CG4774	NP_733116.1	322	cardiolipin synthase, isoform B
3R	NT_033777.3	25699985	25739610	-	43105	LpR2	Dmel_CG31092	NP_001097926.1	1029	lipophorin receptor 2, isoform C
3R	NT_033777.3	25699985	25718488	-	43105	LpR2	Dmel_CG31092	NP_788742.1	826	lipophorin receptor 2, isoform B
3R	NT_033777.3	25699985	25739610	-	43105	LpR2	Dmel_CG31092	NP_001097927.1	380	lipophorin receptor 2, isoform D
3R	NT_033777.3	25699985	25718488	-	43105	LpR2	Dmel_CG31092	NP_001097929.1	861	lipophorin receptor 2, isoform F
3R	NT_033777.3	25699985	25739610	-	43105	LpR2	Dmel_CG31092	NP_001097930.1	1063	lipophorin receptor 2, isoform G
3R	NT_033777.3	25699985	25739610	-	43105	LpR2	Dmel_CG31092	NP_001097928.1	1064	lipophorin receptor 2, isoform E
3R	NT_033777.3	25699985	25739610	-	43105	LpR2	Dmel_CG31092	NP_733118.3	1028	lipophorin receptor 2, isoform A
3R	NT_033777.3	25699985	25718488	-	43105	LpR2	Dmel_CG31092	NP_001262970.1	862	lipophorin receptor 2, isoform H
3R	NT_033777.3	25701246	25718488	-	43105	LpR2	Dmel_CG31092	NP_001262971.1	834	lipophorin receptor 2, isoform I
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_001262972.1	976	lipophorin receptor 1, isoform P
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_996296.2	1037	lipophorin receptor 1, isoform H
3R	NT_033777.3	25741980	25752142	-	2768687	LpR1	Dmel_CG31094	NP_001097931.3	887	lipophorin receptor 1, isoform S
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_001163734.1	978	lipophorin receptor 1, isoform L
3R	NT_033777.3	25741980	25752142	-	2768687	LpR1	Dmel_CG31094	NP_733119.2	889	lipophorin receptor 1, isoform G
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_001097934.2	1076	lipophorin receptor 1, isoform K
3R	NT_033777.3	25741980	25761302	-	2768687	LpR1	Dmel_CG31094	NP_001262974.1	868	lipophorin receptor 1, isoform R
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_001262973.1	976	lipophorin receptor 1, isoform Q
3R	NT_033777.3	25741980	25752142	-	2768687	LpR1	Dmel_CG31094	NP_001097932.1	830	lipophorin receptor 1, isoform D
3R	NT_033777.3	25741980	25759176	-	2768687	LpR1	Dmel_CG31094	NP_001097933.2	996	lipophorin receptor 1, isoform J
3R	NT_033777.3	25773432	25774331	-	43111	CG17197	Dmel_CG17197	NP_651424.3	299	uncharacterized protein Dmel_CG17198, isoform A
3R	NT_033777.3	25773432	25774331	-	43111	CG17197	Dmel_CG17197	NP_001287532.1	299	uncharacterized protein Dmel_CG17198, isoform B
3R	NT_033777.3	25774331	25775281	-	43111	CG17197	Dmel_CG17197	NP_651425.2	290	uncharacterized protein Dmel_CG17197
3R	NT_033777.3	25775376	25776206	-	43112	CG17196	Dmel_CG17196	NP_001262975.1	253	uncharacterized protein Dmel_CG17196, isoform C
3R	NT_033777.3	25775376	25776206	-	43112	CG17196	Dmel_CG17196	NP_001163735.1	251	uncharacterized protein Dmel_CG17196, isoform B
3R	NT_033777.3	25775376	25776206	-	43112	CG17196	Dmel_CG17196	NP_651426.1	276	uncharacterized protein Dmel_CG17196, isoform A
3R	NT_033777.3	25776330	25777181	-	43113	CG17195	Dmel_CG17195	NP_651427.2	283	uncharacterized protein Dmel_CG17195
3R	NT_033777.3	25777321	25778229	-	43114	CG4956	Dmel_CG4956	NP_651428.2	302	CG4956
3R	NT_033777.3	25786698	25787222	-	43115	CG4960	Dmel_CG4960	NP_651429.1	174	CG4960, isoform A
3R	NT_033777.3	25786698	25787222	-	43115	CG4960	Dmel_CG4960	NP_001287533.1	174	CG4960, isoform B
3R	NT_033777.3	25788111	25789452	-	318701	CG31380	Dmel_CG31380	NP_733121.1	405	uncharacterized protein Dmel_CG31380
3R	NT_033777.3	25789950	25790455	-	43116	CG31093	Dmel_CG31093	NP_733122.1	145	uncharacterized protein Dmel_CG31093
3R	NT_033777.3	25806467	25806920	+	4379865	BG642167	Dmel_CG34103	NP_001036758.1	106	BG642167
3R	NT_033777.3	25811205	25811702	+	43117	CG5024	Dmel_CG5024	NP_651431.1	165	CG5024, isoform A
3R	NT_033777.3	25811205	25811702	+	43117	CG5024	Dmel_CG5024	NP_001163736.1	165	CG5024, isoform B
3R	NT_033777.3	25811989	25812483	+	44913	Acam	Dmel_CG17769	NP_651432.1	164	uncharacterized protein Dmel_CG17770
3R	NT_033777.3	25812644	25813090	+	44913	Acam	Dmel_CG17769	NP_476988.1	148	androcam, isoform A
3R	NT_033777.3	25812644	25813090	+	44913	Acam	Dmel_CG17769	NP_001163737.1	148	androcam, isoform B
3R	NT_033777.3	25815558	25816509	+	43120	CG14354	Dmel_CG14354	NP_651433.1	298	uncharacterized protein Dmel_CG14354
3R	NT_033777.3	25829454	25829684	-	43121	Mst57Dc	Dmel_CG4986	NP_524498.2	76	Male-specific transcript 57Dc
3R	NT_033777.3	25830110	25830211	-	8673987	Sfp96F	Dmel_CG42609	NP_001163738.1	33	seminal fluid protein 96F
3R	NT_033777.3	25830782	25830904	-	43122	Mst57Db	Dmel_CG5016	NP_524499.2	40	Male-specific RNA 57Db
3R	NT_033777.3	25831649	25831876	-	47954	Mst57Da	Dmel_CG9074	NP_524906.1	75	Male-specific RNA 57Da
3R	NT_033777.3	25832249	25842565	+	43124	alpha4GT2	Dmel_CG5878	NP_651434.3	395	alpha4GT2
3R	NT_033777.3	25850688	25851191	-	50075	CG14545	Dmel_CG14545	NP_652254.3	144	uncharacterized protein Dmel_CG14545
3R	NT_033777.3	25851733	25853744	+	43125	CG5886	Dmel_CG5886	NP_651435.1	515	CG5886
3R	NT_033777.3	25867304	25869666	+	43126	CG5890	Dmel_CG5890	NP_001287534.1	206	CG5890, isoform D
3R	NT_033777.3	25867304	25869666	+	43126	CG5890	Dmel_CG5890	NP_001163739.2	206	CG5890, isoform C
3R	NT_033777.3	25867304	25869666	+	43126	CG5890	Dmel_CG5890	NP_651436.1	206	CG5890, isoform A
3R	NT_033777.3	25875042	25881081	-	43127	Tsp96F	Dmel_CG6120	NP_001262976.1	284	tetraspanin 96F, isoform B
3R	NT_033777.3	25875090	25881081	-	43127	Tsp96F	Dmel_CG6120	NP_524500.1	268	tetraspanin 96F, isoform A
3R	NT_033777.3	25875090	25881081	-	43127	Tsp96F	Dmel_CG6120	NP_001262977.1	268	tetraspanin 96F, isoform C
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_651437.1	417	signal peptide peptidase-like, isoform A
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_001163740.1	422	signal peptide peptidase-like, isoform D
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_001287535.1	417	signal peptide peptidase-like, isoform F
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_001163741.1	422	signal peptide peptidase-like, isoform E
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_733123.1	417	signal peptide peptidase-like, isoform B
3R	NT_033777.3	25885538	25887366	+	43128	SppL	Dmel_CG17370	NP_733124.1	417	signal peptide peptidase-like, isoform C
3R	NT_033777.3	25889778	25892802	+	43130	Lnk	Dmel_CG17367	NP_733126.1	723	Lnk, isoform C
3R	NT_033777.3	25889778	25892043	+	43130	Lnk	Dmel_CG17367	NP_001287537.1	613	Lnk, isoform E
3R	NT_033777.3	25889778	25892802	+	43130	Lnk	Dmel_CG17367	NP_001287536.1	728	Lnk, isoform D
3R	NT_033777.3	25889778	25892802	+	43130	Lnk	Dmel_CG17367	NP_733125.1	723	Lnk, isoform A
3R	NT_033777.3	25889778	25892043	+	43130	Lnk	Dmel_CG17367	NP_001287538.1	608	Lnk, isoform F
3R	NT_033777.3	25889778	25892802	+	43130	Lnk	Dmel_CG17367	NP_651438.1	723	Lnk, isoform B
3R	NT_033777.3	25893570	25894934	+	43132	CG5913	Dmel_CG5913	NP_651439.2	454	CG5913
3R	NT_033777.3	25895880	25897094	+	43133	CG5948	Dmel_CG5948	NP_001247306.1	269	CG5948, isoform B
3R	NT_033777.3	25895880	25897094	+	43133	CG5948	Dmel_CG5948	NP_651440.1	270	CG5948, isoform A
3R	NT_033777.3	25897490	25899590	+	43134	MCO3	Dmel_CG5959	NP_651441.1	677	multicopper oxidase 3
3R	NT_033777.3	25900594	25901989	+	318591	CG31091	Dmel_CG31091	NP_733127.1	424	uncharacterized protein Dmel_CG31091, isoform C
3R	NT_033777.3	25900594	25901989	+	318591	CG31091	Dmel_CG31091	NP_001247307.1	424	uncharacterized protein Dmel_CG31091, isoform B
3R	NT_033777.3	25902697	25904090	+	43135	CG31089	Dmel_CG31089	NP_733128.1	421	uncharacterized protein Dmel_CG31089
3R	NT_033777.3	25907663	25914793	+	43136	CG42235	Dmel_CG42235	NP_001138111.1	695	uncharacterized protein Dmel_CG42235, isoform B
3R	NT_033777.3	25907663	25918936	+	43136	CG42235	Dmel_CG42235	NP_651446.2	698	uncharacterized protein Dmel_CG42235, isoform D
3R	NT_033777.3	25907663	25920846	+	43136	CG42235	Dmel_CG42235	NP_651447.2	691	uncharacterized protein Dmel_CG42235, isoform E
3R	NT_033777.3	25907663	25912759	+	43136	CG42235	Dmel_CG42235	NP_001138112.1	695	uncharacterized protein Dmel_CG42235, isoform A
3R	NT_033777.3	25907663	25916934	+	43136	CG42235	Dmel_CG42235	NP_733129.1	689	uncharacterized protein Dmel_CG42235, isoform C
3R	NT_033777.3	25921233	25922497	-	43142	CG14546	Dmel_CG14546	NP_651448.2	388	uncharacterized protein Dmel_CG14546
3R	NT_033777.3	25924359	25941625	-	2768688	CCAP-R	Dmel_CG33344	NP_996297.3	494	crustacean cardioactive peptide receptor
3R	NT_033777.3	25959476	25961441	+	43145	CG14540	Dmel_CG14540	NP_651451.1	613	uncharacterized protein Dmel_CG14540
3R	NT_033777.3	25963564	25966798	+	43146	boss	Dmel_CG8285	NP_542440.1	896	bride of sevenless
3R	NT_033777.3	25970861	25981297	+	43148	fid	Dmel_CG42261	NP_651453.3	1391	fire dancer
3R	NT_033777.3	25983292	25994661	+	43149	Nf1	Dmel_CG8318	NP_001262978.1	2793	neurofibromin 1, isoform E
3R	NT_033777.3	25983292	25993786	+	43149	Nf1	Dmel_CG8318	NP_733132.2	2802	neurofibromin 1, isoform B
3R	NT_033777.3	25983292	25994781	+	43149	Nf1	Dmel_CG8318	NP_733131.2	2746	neurofibromin 1, isoform C
3R	NT_033777.3	25983292	25994574	+	43149	Nf1	Dmel_CG8318	NP_001262979.1	2734	neurofibromin 1, isoform F
3R	NT_033777.3	25983292	25994574	+	43149	Nf1	Dmel_CG8318	NP_001014668.1	2764	neurofibromin 1, isoform D
3R	NT_033777.3	25996174	25996892	-	12798270	CG43116	Dmel_CG43116	NP_001247308.1	165	uncharacterized protein Dmel_CG43116
3R	NT_033777.3	25997732	25998253	+	43150	E(spl)mdelta-HLH	Dmel_CG8328	NP_524503.2	173	enhancer of split mdelta, helix-loop-helix
3R	NT_033777.3	25999943	26000560	+	43151	E(spl)mgamma-HLH	Dmel_CG8333	NP_524504.2	205	enhancer of split mgamma, helix-loop-helix
3R	NT_033777.3	26005306	26005893	-	43152	E(spl)mbeta-HLH	Dmel_CG14548	NP_524505.2	195	enhancer of split mbeta, helix-loop-helix
3R	NT_033777.3	26010963	26011379	+	43153	E(spl)malpha-BFM	Dmel_CG8337	NP_524506.1	138	enhancer of split malpha, bearded family member
3R	NT_033777.3	26014816	26015348	+	43154	Kaz-m1	Dmel_CG8342	NP_001262980.1	156	Kazal-type protease inhibitor m1, isoform B
3R	NT_033777.3	26014816	26015348	+	43154	Kaz-m1	Dmel_CG8342	NP_524507.1	156	Kazal-type protease inhibitor m1, isoform A
3R	NT_033777.3	26016706	26017362	-	43155	E(spl)m2-BFM	Dmel_CG6104	NP_524508.1	218	enhancer of split m2, bearded family member
3R	NT_033777.3	26022020	26022694	+	43156	E(spl)m3-HLH	Dmel_CG8346	NP_524509.2	224	enhancer of split m3, helix-loop-helix
3R	NT_033777.3	26024035	26024493	-	43157	E(spl)m4-BFM	Dmel_CG6099	NP_524510.1	152	enhancer of split m4, bearded family member
3R	NT_033777.3	26029116	26029652	-	43158	E(spl)m5-HLH	Dmel_CG6096	NP_524511.1	178	enhancer of split m5, helix-loop-helix
3R	NT_033777.3	26032984	26033196	+	43159	E(spl)m6-BFM	Dmel_CG8354	NP_524512.2	70	enhancer of split m6, bearded family member
3R	NT_033777.3	26037163	26037723	+	43160	E(spl)m7-HLH	Dmel_CG8361	NP_536753.1	186	enhancer of split m7, helix-loop-helix
3R	NT_033777.3	26040324	26040863	+	43161	E(spl)m8-HLH	Dmel_CG8365	NP_524513.1	179	enhancer of split m8, helix-loop-helix
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_733134.1	719	groucho, isoform B
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_001287539.1	717	groucho, isoform J
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_001189294.1	728	groucho, isoform G
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_996298.1	730	groucho, isoform E
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_524514.2	719	groucho, isoform D
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_001247309.1	709	groucho, isoform H
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_733135.1	719	groucho, isoform C
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_001262981.1	698	groucho, isoform I
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_733133.1	719	groucho, isoform A
3R	NT_033777.3	26043344	26048605	+	43162	gro	Dmel_CG8384	NP_001189293.1	719	groucho, isoform F
3R	NT_033777.3	26049930	26052229	-	43163	Exo84	Dmel_CG6095	NP_996299.1	672	exocyst 84, isoform B
3R	NT_033777.3	26049930	26052229	-	43163	Exo84	Dmel_CG6095	NP_651454.1	671	exocyst 84, isoform A
3R	NT_033777.3	26052917	26053747	+	43164	Vps2	Dmel_CG14542	NP_651455.1	256	vacuolar protein sorting 2
3R	NT_033777.3	26054575	26055336	-	43165	Dak1	Dmel_CG6092	NP_651456.1	253	Dak1
3R	NT_033777.3	26055687	26056491	-	43166	Sld5	Dmel_CG14549	NP_651457.1	228	Sld5
3R	NT_033777.3	26056657	26057308	+	43167	CG14543	Dmel_CG14543	NP_651458.1	195	uncharacterized protein Dmel_CG14543
3R	NT_033777.3	26057347	26057823	-	43168	CG14550	Dmel_CG14550	NP_651459.2	158	uncharacterized protein Dmel_CG14550
3R	NT_033777.3	26057789	26058187	-	43168	CG14550	Dmel_CG14550	NP_001163743.1	111	uncharacterized protein Dmel_CG42498
3R	NT_033777.3	26058494	26059044	-	43169	RpL34a	Dmel_CG6090	NP_733136.1	162	ribosomal protein L34a, isoform B
3R	NT_033777.3	26058494	26059044	-	43169	RpL34a	Dmel_CG6090	NP_001189295.1	162	ribosomal protein L34a, isoform C
3R	NT_033777.3	26058494	26059044	-	43169	RpL34a	Dmel_CG6090	NP_651460.2	162	ribosomal protein L34a, isoform A
3R	NT_033777.3	26059580	26061262	+	43170	CG14544	Dmel_CG14544	NP_651461.1	317	uncharacterized protein Dmel_CG14544, isoform A
3R	NT_033777.3	26059580	26061262	+	43170	CG14544	Dmel_CG14544	NP_001303484.1	317	uncharacterized protein Dmel_CG14544, isoform B
3R	NT_033777.3	26061312	26062229	-	43171	CG14551	Dmel_CG14551	NP_001262982.1	201	uncharacterized protein Dmel_CG14551, isoform B
3R	NT_033777.3	26061312	26062229	-	43171	CG14551	Dmel_CG14551	NP_651462.1	201	uncharacterized protein Dmel_CG14551, isoform A
3R	NT_033777.3	26077222	26098145	-	43174	dysf	Dmel_CG32474	NP_733137.3	920	dysfusion, isoform D
3R	NT_033777.3	26077222	26096529	-	43174	dysf	Dmel_CG32474	NP_001097935.1	884	dysfusion, isoform B
3R	NT_033777.3	26077467	26098145	-	43174	dysf	Dmel_CG32474	NP_001097936.1	917	dysfusion, isoform C
3R	NT_033777.3	26124474	26129614	+	43177	CG31324	Dmel_CG31324	NP_733138.1	264	uncharacterized protein Dmel_CG31324, isoform A
3R	NT_033777.3	26124474	26129614	+	43177	CG31324	Dmel_CG31324	NP_001262983.1	264	uncharacterized protein Dmel_CG31324, isoform B
3R	NT_033777.3	26126727	26127731	+	43176	CG14556	Dmel_CG14556	NP_651464.2	334	uncharacterized protein Dmel_CG14556
3R	NT_033777.3	26128872	26129614	+	43177	CG31324	Dmel_CG31324	NP_001262984.1	203	uncharacterized protein Dmel_CG31324, isoform C
3R	NT_033777.3	26134995	26136958	+	43178	CG6142	Dmel_CG6142	NP_651466.1	616	CG6142
3R	NT_033777.3	26183892	26184612	+	318682	CG31323	Dmel_CG31323	NP_001247310.1	169	uncharacterized protein Dmel_CG31323, isoform B
3R	NT_033777.3	26183892	26184612	+	318682	CG31323	Dmel_CG31323	NP_651467.1	169	uncharacterized protein Dmel_CG31323, isoform A
3R	NT_033777.3	26185660	26186177	+	43179	CG31086	Dmel_CG31086	NP_733139.1	148	uncharacterized protein Dmel_CG31086, isoform A
3R	NT_033777.3	26185660	26186177	+	43179	CG31086	Dmel_CG31086	NP_001247312.1	148	uncharacterized protein Dmel_CG31086, isoform B
3R	NT_033777.3	26187382	26188717	-	43180	CG6073	Dmel_CG6073	NP_651468.1	369	CG6073, isoform A
3R	NT_033777.3	26187382	26188717	-	43180	CG6073	Dmel_CG6073	NP_001247313.1	369	CG6073, isoform B
3R	NT_033777.3	26189067	26189960	-	4379866	CG34130	Dmel_CG34130	NP_001036759.1	297	uncharacterized protein Dmel_CG34130
3R	NT_033777.3	26190256	26191200	-	43181	CG34129	Dmel_CG34129	NP_001036760.1	314	uncharacterized protein Dmel_CG34129
3R	NT_033777.3	26230705	26233101	+	43182	CG12290	Dmel_CG12290	NP_651470.1	798	uncharacterized protein Dmel_CG12290, isoform A
3R	NT_033777.3	26230705	26233101	+	43182	CG12290	Dmel_CG12290	NP_001287540.1	798	uncharacterized protein Dmel_CG12290, isoform B
3R	NT_033777.3	26255342	26258020	-	43183	Ald	Dmel_CG6058	NP_733142.1	361	aldolase, isoform C
3R	NT_033777.3	26255342	26258020	-	43183	Ald	Dmel_CG6058	NP_733143.1	361	aldolase, isoform D
3R	NT_033777.3	26255342	26258020	-	43183	Ald	Dmel_CG6058	NP_733144.3	361	aldolase, isoform K
3R	NT_033777.3	26255342	26258020	-	43183	Ald	Dmel_CG6058	NP_001287541.1	361	aldolase, isoform M
3R	NT_033777.3	26255342	26258020	-	43183	Ald	Dmel_CG6058	NP_733141.1	361	aldolase, isoform B
3R	NT_033777.3	26256212	26258020	-	43183	Ald	Dmel_CG6058	NP_001262985.1	363	aldolase, isoform L
3R	NT_033777.3	26256212	26258020	-	43183	Ald	Dmel_CG6058	NP_733140.2	363	aldolase, isoform J
3R	NT_033777.3	26256212	26258020	-	43183	Ald	Dmel_CG6058	NP_996300.1	363	aldolase, isoform H
3R	NT_033777.3	26256528	26258020	-	43183	Ald	Dmel_CG6058	NP_524515.2	363	aldolase, isoform E
3R	NT_033777.3	26256528	26258020	-	43183	Ald	Dmel_CG6058	NP_733145.3	363	aldolase, isoform I
3R	NT_033777.3	26268452	26274883	+	43184	CG6154	Dmel_CG6154	NP_651471.2	434	CG6154, isoform D
3R	NT_033777.3	26268452	26274883	+	43184	CG6154	Dmel_CG6154	NP_733146.2	434	CG6154, isoform C
3R	NT_033777.3	26331408	26361564	+	43186	CG33970	Dmel_CG33970	NP_001034071.1	777	uncharacterized protein Dmel_CG33970, isoform A
3R	NT_033777.3	26331408	26361564	+	43186	CG33970	Dmel_CG33970	NP_001287542.1	777	uncharacterized protein Dmel_CG33970, isoform C
3R	NT_033777.3	26344331	26345446	-	43185	CG6036	Dmel_CG6036	NP_651472.2	371	CG6036
3R	NT_033777.3	26355624	26361564	+	43186	CG33970	Dmel_CG33970	NP_001034070.1	518	uncharacterized protein Dmel_CG33970, isoform B
3R	NT_033777.3	26401909	26403656	-	43188	ppk15	Dmel_CG14239	NP_001097937.1	483	pickpocket 15
3R	NT_033777.3	26414132	26415348	+	43189	CG5432	Dmel_CG5432	NP_651476.1	364	CG5432, isoform A
3R	NT_033777.3	26414132	26415348	+	43189	CG5432	Dmel_CG5432	NP_001247314.1	364	CG5432, isoform B
3R	NT_033777.3	26424808	26424996	-	50079	CG6503	Dmel_CG6503	NP_001189297.1	62	CG6503, isoform B
3R	NT_033777.3	26424808	26424996	-	50079	CG6503	Dmel_CG6503	NP_652258.2	62	CG6503, isoform A
3R	NT_033777.3	26424808	26424996	-	50079	CG6503	Dmel_CG6503	NP_001247315.1	62	CG6503, isoform C
3R	NT_033777.3	26425323	26425508	-	5740331	CG34291	Dmel_CG34291	NP_001097938.1	61	uncharacterized protein Dmel_CG34291
3R	NT_033777.3	26447540	26448694	+	43190	tx	Dmel_CG5441	NP_001287543.1	384	taxi, isoform B
3R	NT_033777.3	26447540	26448694	+	43190	tx	Dmel_CG5441	NP_524516.2	384	taxi, isoform A
3R	NT_033777.3	26449154	26450551	+	117364	Hex-t1	Dmel_CG33102	NP_788744.1	465	Hex-t1
3R	NT_033777.3	26450683	26452231	+	43191	Hex-t2	Dmel_CG32849	NP_733151.2	486	Hex-t2
3R	NT_033777.3	26452861	26453748	+	43192	CG5447	Dmel_CG5447	NP_001262986.1	164	CG5447, isoform B
3R	NT_033777.3	26452861	26453709	+	43192	CG5447	Dmel_CG5447	NP_651478.1	151	CG5447, isoform A
3R	NT_033777.3	26454813	26455040	+	12798272	CG43117	Dmel_CG43117	NP_001247316.1	75	uncharacterized protein Dmel_CG43117
3R	NT_033777.3	26455755	26456063	-	43193	Pdf	Dmel_CG6496	NP_524517.1	102	Pigment-dispersing factor
3R	NT_033777.3	26456877	26457242	+	43194	CG14237	Dmel_CG14237	NP_651479.2	121	uncharacterized protein Dmel_CG14237
3R	NT_033777.3	26458353	26460747	+	43195	CG14238	Dmel_CG14238	NP_651480.1	523	uncharacterized protein Dmel_CG14238
3R	NT_033777.3	26466682	26469402	+	43196	CG5455	Dmel_CG5455	NP_733152.1	688	CG5455, isoform B
3R	NT_033777.3	26466682	26469402	+	43196	CG5455	Dmel_CG5455	NP_651481.1	688	CG5455, isoform A
3R	NT_033777.3	26472979	26532224	-	43197	plum	Dmel_CG6490	NP_001247317.1	1298	plum, isoform D
3R	NT_033777.3	26472979	26532224	-	43197	plum	Dmel_CG6490	NP_001287544.1	1298	plum, isoform E
3R	NT_033777.3	26472979	26532224	-	43197	plum	Dmel_CG6490	NP_001163744.1	1298	plum, isoform C
3R	NT_033777.3	26472979	26532224	-	43197	plum	Dmel_CG6490	NP_651482.3	1298	plum, isoform B
3R	NT_033777.3	26537623	26581070	+	44448	scrib	Dmel_CG43398	NP_001014669.1	1711	scribbled, isoform I
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001247321.1	2577	scribbled, isoform Q
3R	NT_033777.3	26537623	26594815	+	44448	scrib	Dmel_CG43398	NP_733154.1	1756	scribbled, isoform A
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001163746.1	2585	scribbled, isoform L
3R	NT_033777.3	26537623	26594815	+	44448	scrib	Dmel_CG43398	NP_001036761.3	1756	scribbled, isoform B
3R	NT_033777.3	26537623	26594815	+	44448	scrib	Dmel_CG43398	NP_001262989.1	1766	scribbled, isoform U
3R	NT_033777.3	26537623	26594815	+	44448	scrib	Dmel_CG43398	NP_524754.2	1851	scribbled, isoform D
3R	NT_033777.3	26537623	26594815	+	44448	scrib	Dmel_CG43398	NP_001014670.2	1939	scribbled, isoform H
3R	NT_033777.3	26537623	26586801	+	44448	scrib	Dmel_CG43398	NP_001247319.1	2554	scribbled, isoform N
3R	NT_033777.3	26537623	26603571	+	44448	scrib	Dmel_CG43398	NP_001247322.1	1951	scribbled, isoform R
3R	NT_033777.3	26537623	26582691	+	44448	scrib	Dmel_CG43398	NP_733155.2	1729	scribbled, isoform P
3R	NT_033777.3	26537623	26586801	+	44448	scrib	Dmel_CG43398	NP_001262988.1	2444	scribbled, isoform T
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001247320.1	2515	scribbled, isoform O
3R	NT_033777.3	26537623	26576671	+	44448	scrib	Dmel_CG43398	NP_733156.1	1247	scribbled, isoform C
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001163745.1	2426	scribbled, isoform J
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001247318.1	2331	scribbled, isoform K
3R	NT_033777.3	26537623	26602875	+	44448	scrib	Dmel_CG43398	NP_001163747.1	2490	scribbled, isoform M
3R	NT_033777.3	26573515	26602875	+	44448	scrib	Dmel_CG43398	NP_001262987.1	1859	scribbled, isoform S
3R	NT_033777.3	26619167	26620110	+	43200	TwdlM	Dmel_CG5468	NP_651484.1	288	TweedleM
3R	NT_033777.3	26620662	26621324	-	43201	TwdlP	Dmel_CG14240	NP_651485.1	220	TweedleP
3R	NT_033777.3	26622568	26623496	-	43202	TwdlB	Dmel_CG6478	NP_651486.1	286	TweedleB
3R	NT_033777.3	26624681	26625602	-	43203	TwdlL	Dmel_CG6447	NP_733158.1	285	TweedleL, isoform A
3R	NT_033777.3	26624681	26625520	-	43203	TwdlL	Dmel_CG6447	NP_733159.1	279	TweedleL, isoform B
3R	NT_033777.3	26626008	26626697	-	43204	TwdlO	Dmel_CG6452	NP_651487.1	229	TweedleO
3R	NT_033777.3	26627964	26628707	-	43205	TwdlK	Dmel_CG6460	NP_651488.1	247	TweedleK
3R	NT_033777.3	26629956	26630780	+	43206	TwdlJ	Dmel_CG5471	NP_651489.2	274	TweedleJ
3R	NT_033777.3	26631931	26632860	+	43207	TwdlN	Dmel_CG5476	NP_733160.1	309	TweedleN
3R	NT_033777.3	26633794	26634582	+	43208	TwdlH	Dmel_CG31080	NP_651490.1	241	TweedleH
3R	NT_033777.3	26634885	26635917	+	318586	TwdlR	Dmel_CG31081	NP_733161.2	325	TweedleR
3R	NT_033777.3	26636714	26637460	+	43209	TwdlS	Dmel_CG14242	NP_651491.1	228	TweedleS
3R	NT_033777.3	26640075	26640910	+	43210	TwdlD	Dmel_CG14243	NP_651492.1	256	TweedleD
3R	NT_033777.3	26649334	26681434	-	43213	beat-VII	Dmel_CG42242	NP_733162.2	517	beat-VII
3R	NT_033777.3	26656529	26657441	+	43212	Tb	Dmel_CG5480	NP_651494.1	283	tubby
3R	NT_033777.3	26692634	26693523	-	43214	TwdlQ	Dmel_CG14250	NP_651496.1	245	TweedleQ
3R	NT_033777.3	26699287	26713723	-	43215	amon	Dmel_CG6438	NP_477318.1	654	amontillado
3R	NT_033777.3	26716019	26717264	-	43216	CG6425	Dmel_CG6425	NP_651497.1	373	CG6425
3R	NT_033777.3	26717978	26719600	+	43217	CG5484	Dmel_CG5484	NP_733164.1	393	CG5484, isoform B
3R	NT_033777.3	26717978	26719600	+	43217	CG5484	Dmel_CG5484	NP_733163.1	397	CG5484, isoform A
3R	NT_033777.3	26717978	26719600	+	43217	CG5484	Dmel_CG5484	NP_651498.1	402	CG5484, isoform C
3R	NT_033777.3	26720788	26724712	-	43218	CG6420	Dmel_CG6420	NP_651499.2	909	CG6420, isoform A
3R	NT_033777.3	26720788	26724712	-	43218	CG6420	Dmel_CG6420	NP_001287545.1	909	CG6420, isoform B
3R	NT_033777.3	26726141	26726524	+	50080	CG14244	Dmel_CG14244	NP_652259.2	106	uncharacterized protein Dmel_CG14244
3R	NT_033777.3	26728761	26729072	+	3772449	CG14245	Dmel_CG14245	NP_001287548.1	103	uncharacterized protein Dmel_CG14245, isoform B
3R	NT_033777.3	26728761	26729072	+	3772449	CG14245	Dmel_CG14245	NP_651500.1	103	uncharacterized protein Dmel_CG14245, isoform A
3R	NT_033777.3	26729769	26730050	+	3772140	CG14246	Dmel_CG14246	NP_652260.1	93	uncharacterized protein Dmel_CG14246, isoform A
3R	NT_033777.3	26729769	26730050	+	3772140	CG14246	Dmel_CG14246	NP_001287546.1	93	uncharacterized protein Dmel_CG14246, isoform B
3R	NT_033777.3	26729769	26730050	+	3772140	CG14246	Dmel_CG14246	NP_001287547.1	93	uncharacterized protein Dmel_CG14246, isoform C
3R	NT_033777.3	26735645	26736248	-	43220	CG6403	Dmel_CG6403	NP_001287549.1	153	CG6403, isoform B
3R	NT_033777.3	26735645	26736248	-	43220	CG6403	Dmel_CG6403	NP_651501.2	153	CG6403, isoform A
3R	NT_033777.3	26737809	26738369	+	43221	CG14247	Dmel_CG14247	NP_651502.2	186	uncharacterized protein Dmel_CG14247
3R	NT_033777.3	26783769	26783981	-	10178793	CG42789	Dmel_CG42789	NP_001262992.1	49	uncharacterized protein Dmel_CG42789, isoform C
3R	NT_033777.3	26783769	26783981	-	10178793	CG42789	Dmel_CG42789	NP_001262991.1	49	uncharacterized protein Dmel_CG42789, isoform B
3R	NT_033777.3	26837737	26841147	+	43222	Tl	Dmel_CG5490	NP_524518.1	1097	toll, isoform B
3R	NT_033777.3	26837737	26841147	+	43222	Tl	Dmel_CG5490	NP_733166.1	1097	toll, isoform D
3R	NT_033777.3	26837737	26841207	+	43222	Tl	Dmel_CG5490	NP_001262995.1	1117	toll, isoform C
3R	NT_033777.3	26843182	26862693	-	43223	Lerp	Dmel_CG31072	NP_733169.2	917	lysosomal enzyme receptor protein, isoform D
3R	NT_033777.3	26843182	26862693	-	43223	Lerp	Dmel_CG31072	NP_733168.2	886	lysosomal enzyme receptor protein, isoform A
3R	NT_033777.3	26843182	26862693	-	43223	Lerp	Dmel_CG31072	NP_733167.2	887	lysosomal enzyme receptor protein, isoform B
3R	NT_033777.3	26843182	26862693	-	43223	Lerp	Dmel_CG31072	NP_001262996.1	918	lysosomal enzyme receptor protein, isoform E
3R	NT_033777.3	26863470	26864456	+	43227	IntS12	Dmel_CG5491	NP_651507.1	328	integrator 12
3R	NT_033777.3	26864669	26866524	-	43228	ball	Dmel_CG6386	NP_651508.1	599	ballchen, isoform A
3R	NT_033777.3	26864669	26866524	-	43228	ball	Dmel_CG6386	NP_733171.1	599	ballchen, isoform B
3R	NT_033777.3	26867093	26868586	+	43229	His2Av	Dmel_CG5499	NP_001262997.1	141	histone H2A variant, isoform B
3R	NT_033777.3	26867093	26868586	+	43229	His2Av	Dmel_CG5499	NP_524519.1	141	histone H2A variant, isoform A
3R	NT_033777.3	26869378	26870354	-	43230	SPARC	Dmel_CG6378	NP_651509.2	304	secreted protein, acidic, cysteine-rich, isoform A
3R	NT_033777.3	26869378	26870354	-	43230	SPARC	Dmel_CG6378	NP_001262998.1	304	secreted protein, acidic, cysteine-rich, isoform B
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_733172.1	465	ribonuclear protein at 97D, isoform A
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014673.1	465	ribonuclear protein at 97D, isoform G
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_524520.1	471	ribonuclear protein at 97D, isoform B
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014672.1	471	ribonuclear protein at 97D, isoform H
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014677.1	465	ribonuclear protein at 97D, isoform C
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014671.1	471	ribonuclear protein at 97D, isoform I
3R	NT_033777.3	26873865	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014674.1	471	ribonuclear protein at 97D, isoform F
3R	NT_033777.3	26873962	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014676.1	434	ribonuclear protein at 97D, isoform D
3R	NT_033777.3	26873962	26875612	-	43231	Rb97D	Dmel_CG6354	NP_001014675.1	434	ribonuclear protein at 97D, isoform E
3R	NT_033777.3	26875956	26876510	+	43232	ms(3)K81	Dmel_CG14251	NP_651510.1	184	male sterile (3) K81
3R	NT_033777.3	26876893	26881105	-	43234	ro	Dmel_CG6348	NP_524521.1	350	rough, isoform A
3R	NT_033777.3	26876893	26881105	-	43234	ro	Dmel_CG6348	NP_733173.1	350	rough, isoform B
3R	NT_033777.3	26879594	26880345	+	43233	CG5500	Dmel_CG5500	NP_651511.1	167	CG5500
3R	NT_033777.3	26883956	26910467	+	43235	T48	Dmel_CG5507	NP_001262999.1	419	transcript 48, isoform B
3R	NT_033777.3	26883956	26910467	+	43235	T48	Dmel_CG5507	NP_524522.2	419	transcript 48, isoform A
3R	NT_033777.3	26911052	26912760	-	43236	Ets97D	Dmel_CG6338	NP_001263000.1	484	Ets at 97D, isoform B
3R	NT_033777.3	26911112	26912760	-	43236	Ets97D	Dmel_CG6338	NP_524523.2	464	Ets at 97D, isoform A
3R	NT_033777.3	26925237	26944523	+	44359	sda	Dmel_CG5518	NP_652744.2	1071	slamdance, isoform A
3R	NT_033777.3	26925237	26944523	+	44359	sda	Dmel_CG5518	NP_001263001.1	1194	slamdance, isoform D
3R	NT_033777.3	26925237	26944523	+	44359	sda	Dmel_CG5518	NP_001247323.1	1083	slamdance, isoform C
3R	NT_033777.3	26925237	26944523	+	44359	sda	Dmel_CG5518	NP_001097939.1	1182	slamdance, isoform B
3R	NT_033777.3	26945580	26947211	+	43238	CG14252	Dmel_CG14252	NP_651513.1	405	uncharacterized protein Dmel_CG14252
3R	NT_033777.3	26947916	26949553	+	43239	CG18472	Dmel_CG18472	NP_651514.1	469	uncharacterized protein Dmel_CG18472
3R	NT_033777.3	26950425	26956575	-	43240	CG6330	Dmel_CG6330	NP_651515.1	347	CG6330, isoform B
3R	NT_033777.3	26950425	26953122	-	43240	CG6330	Dmel_CG6330	NP_733175.1	368	CG6330, isoform A
3R	NT_033777.3	26962356	26964702	-	43241	Tsp97E	Dmel_CG6323	NP_001287550.1	228	tetraspanin 97E, isoform H
3R	NT_033777.3	26962356	26964702	-	43241	Tsp97E	Dmel_CG6323	NP_001263002.1	228	tetraspanin 97E, isoform E
3R	NT_033777.3	26962356	26964702	-	43241	Tsp97E	Dmel_CG6323	NP_524524.1	228	tetraspanin 97E, isoform A
3R	NT_033777.3	26963006	26964702	-	43241	Tsp97E	Dmel_CG6323	NP_001138115.2	221	tetraspanin 97E, isoform G
3R	NT_033777.3	26963006	26964702	-	43241	Tsp97E	Dmel_CG6323	NP_733176.2	221	tetraspanin 97E, isoform D
3R	NT_033777.3	26965144	26966472	-	117338	Gr97a	Dmel_CG33083	NP_788747.1	423	gustatory receptor 97a, isoform A
3R	NT_033777.3	26965144	26966472	-	117338	Gr97a	Dmel_CG33083	NP_001287551.1	425	gustatory receptor 97a, isoform B
3R	NT_033777.3	26967444	26976545	+	43242	CG5521	Dmel_CG5521	NP_651516.1	1958	CG5521, isoform A
3R	NT_033777.3	26967444	26976545	+	43242	CG5521	Dmel_CG5521	NP_001163748.1	1964	CG5521, isoform B
3R	NT_033777.3	26978663	26978722	+	43243	CG14253	Dmel_CG14253	NP_001334703.1	19	uncharacterized protein Dmel_CG46313
3R	NT_033777.3	26978778	26985257	+	43243	CG14253	Dmel_CG14253	NP_651517.1	399	uncharacterized protein Dmel_CG14253, isoform B
3R	NT_033777.3	26981688	26985257	+	43243	CG14253	Dmel_CG14253	NP_733182.1	390	uncharacterized protein Dmel_CG14253, isoform E
3R	NT_033777.3	26981688	26985257	+	43243	CG14253	Dmel_CG14253	NP_733179.1	390	uncharacterized protein Dmel_CG14253, isoform A
3R	NT_033777.3	26981688	26985257	+	43243	CG14253	Dmel_CG14253	NP_001263003.1	390	uncharacterized protein Dmel_CG14253, isoform F
3R	NT_033777.3	26981688	26985257	+	43243	CG14253	Dmel_CG14253	NP_733181.1	390	uncharacterized protein Dmel_CG14253, isoform D
3R	NT_033777.3	26981688	26985257	+	43243	CG14253	Dmel_CG14253	NP_733180.1	390	uncharacterized protein Dmel_CG14253, isoform C
3R	NT_033777.3	26985726	26988443	-	43244	CG31075	Dmel_CG31075	NP_733183.1	485	uncharacterized protein Dmel_CG31075, isoform A
3R	NT_033777.3	26985726	26987516	-	43244	CG31075	Dmel_CG31075	NP_001247324.1	508	uncharacterized protein Dmel_CG31075, isoform B
3R	NT_033777.3	26989035	26989786	-	318582	CG31076	Dmel_CG31076	NP_733184.2	182	uncharacterized protein Dmel_CG31076
3R	NT_033777.3	26994934	26996231	+	43245	TwdlC	Dmel_CG14254	NP_651519.1	360	TweedleC
3R	NT_033777.3	26999758	27002785	+	318583	CG31077	Dmel_CG31077	NP_733185.2	988	uncharacterized protein Dmel_CG31077
3R	NT_033777.3	27003320	27005457	-	43246	CG6296	Dmel_CG6296	NP_651520.1	676	CG6296
3R	NT_033777.3	27005948	27007030	-	43247	CG6295	Dmel_CG6295	NP_651521.1	338	CG6295
3R	NT_033777.3	27017213	27018282	-	43248	CG17192	Dmel_CG17192	NP_651522.1	337	uncharacterized protein Dmel_CG17192
3R	NT_033777.3	27018660	27019727	-	43249	CG17191	Dmel_CG17191	NP_651523.1	337	uncharacterized protein Dmel_CG17191
3R	NT_033777.3	27020276	27021353	-	43250	CG6283	Dmel_CG6283	NP_651524.1	339	CG6283
3R	NT_033777.3	27022100	27023187	-	43251	CG6277	Dmel_CG6277	NP_651525.1	341	CG6277
3R	NT_033777.3	27024993	27026088	-	43252	CG6271	Dmel_CG6271	NP_651526.1	341	CG6271
3R	NT_033777.3	27028022	27057191	+	43253	RYa-R	Dmel_CG5811	NP_001287553.1	467	RYamide receptor, isoform C
3R	NT_033777.3	27028022	27057782	+	43253	RYa-R	Dmel_CG5811	NP_001287552.1	518	RYamide receptor, isoform B
3R	NT_033777.3	27028022	27057690	+	43253	RYa-R	Dmel_CG5811	NP_524525.3	464	RYamide receptor, isoform A
3R	NT_033777.3	27049512	27050448	+	44790	TwdlT	Dmel_CG5812	NP_651999.1	286	TweedleT
3R	NT_033777.3	27058238	27063391	-	43255	Nep5	Dmel_CG6265	NP_733186.2	882	neprilysin 5, isoform D
3R	NT_033777.3	27059012	27063391	-	43255	Nep5	Dmel_CG6265	NP_651527.3	702	neprilysin 5, isoform E
3R	NT_033777.3	27059067	27063391	-	43255	Nep5	Dmel_CG6265	NP_001097940.1	702	neprilysin 5, isoform C
3R	NT_033777.3	27059067	27063391	-	43255	Nep5	Dmel_CG6265	NP_001287554.1	702	neprilysin 5, isoform F
3R	NT_033777.3	27062276	27062863	+	5740196	CG34292	Dmel_CG34292	NP_001097941.1	195	uncharacterized protein Dmel_CG34292
3R	NT_033777.3	27065560	27065688	+	14462523	CG43935	Dmel_CG43935	NP_001263004.1	42	uncharacterized protein Dmel_CG43935
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_524526.1	326	spatzle, isoform A
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_001138116.1	270	spatzle, isoform L
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_001097942.1	290	spatzle, isoform K
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_733191.1	300	spatzle, isoform B
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_733195.1	273	spatzle, isoform D
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_733194.1	253	spatzle, isoform C
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_733192.1	244	spatzle, isoform J
3R	NT_033777.3	27065854	27069209	-	43256	spz	Dmel_CG6134	NP_733188.1	227	spatzle, isoform I
3R	NT_033777.3	27076253	27082577	+	43257	CG14257	Dmel_CG14257	NP_001263005.1	290	uncharacterized protein Dmel_CG14257, isoform C
3R	NT_033777.3	27076253	27082217	+	43257	CG14257	Dmel_CG14257	NP_651528.2	547	uncharacterized protein Dmel_CG14257, isoform B
3R	NT_033777.3	27083273	27086349	-	43258	Cpr97Ea	Dmel_CG6131	NP_651529.2	366	cuticular protein 97Ea, isoform A
3R	NT_033777.3	27083273	27084483	-	43258	Cpr97Ea	Dmel_CG6131	NP_001263006.1	363	cuticular protein 97Ea, isoform B
3R	NT_033777.3	27089911	27090991	-	43259	Cpr97Eb	Dmel_CG15884	NP_651530.1	235	cuticular protein 97Eb
3R	NT_033777.3	27093179	27094136	+	43260	CG14258	Dmel_CG14258	NP_651531.1	258	uncharacterized protein Dmel_CG14258
3R	NT_033777.3	27094653	27095774	+	43261	CG14259	Dmel_CG14259	NP_651532.1	289	uncharacterized protein Dmel_CG14259
3R	NT_033777.3	27095924	27099660	-	43262	eater	Dmel_CG6124	NP_651533.3	1074	eater
3R	NT_033777.3	27101498	27102809	+	43263	CG17189	Dmel_CG17189	NP_651534.1	264	uncharacterized protein Dmel_CG17189
3R	NT_033777.3	27103121	27106123	-	43264	caix	Dmel_CG6074	NP_651535.1	311	caix
3R	NT_033777.3	27108997	27111719	-	43265	gb	Dmel_CG6070	NP_001287555.1	517	genderblind, isoform B
3R	NT_033777.3	27108997	27111719	-	43265	gb	Dmel_CG6070	NP_001303442.1	517	genderblind, isoform C
3R	NT_033777.3	27108997	27111719	-	43265	gb	Dmel_CG6070	NP_651536.1	517	genderblind, isoform A
3R	NT_033777.3	27112628	27114632	+	43266	CG5815	Dmel_CG5815	NP_733196.1	581	CG5815, isoform A
3R	NT_033777.3	27112628	27114632	+	43266	CG5815	Dmel_CG5815	NP_651537.3	579	CG5815, isoform C
3R	NT_033777.3	27115231	27116622	-	43267	CG6066	Dmel_CG6066	NP_651538.1	463	CG6066
3R	NT_033777.3	27116883	27118290	+	43268	CG5880	Dmel_CG5880	NP_651539.3	381	CG5880
3R	NT_033777.3	27118646	27121590	+	43269	CG5882	Dmel_CG5882	NP_651540.1	866	CG5882
3R	NT_033777.3	27121736	27124564	-	43270	CG6059	Dmel_CG6059	NP_651541.2	884	CG6059
3R	NT_033777.3	27125643	27150429	-	43271	CG6051	Dmel_CG6051	NP_001097943.1	989	CG6051, isoform B
3R	NT_033777.3	27125643	27150429	-	43271	CG6051	Dmel_CG6051	NP_001287556.1	988	CG6051, isoform D
3R	NT_033777.3	27125643	27150429	-	43271	CG6051	Dmel_CG6051	NP_001247325.1	989	CG6051, isoform C
3R	NT_033777.3	27151890	27156316	+	43936	Men-b	Dmel_CG5889	NP_001163749.1	621	malic enzyme b, isoform B
3R	NT_033777.3	27151890	27156374	+	43936	Men-b	Dmel_CG5889	NP_651959.1	617	malic enzyme b, isoform A
3R	NT_033777.3	27151890	27157163	+	43936	Men-b	Dmel_CG5889	NP_001163750.1	624	malic enzyme b, isoform C
3R	NT_033777.3	27158039	27159689	+	43273	grass	Dmel_CG5896	NP_651543.1	377	Gram-positive specific serine protease, isoform B
3R	NT_033777.3	27158239	27159689	+	43273	grass	Dmel_CG5896	NP_733197.1	335	Gram-positive specific serine protease, isoform A
3R	NT_033777.3	27161335	27162779	+	43274	CG5909	Dmel_CG5909	NP_651544.1	381	CG5909
3R	NT_033777.3	27163124	27165131	+	318575	ppk31	Dmel_CG31065	NP_001097944.1	421	pickpocket 31
3R	NT_033777.3	27165213	27165528	-	5740555	CG34293	Dmel_CG34293	NP_001097945.1	84	uncharacterized protein Dmel_CG34293, isoform A
3R	NT_033777.3	27165213	27165528	-	5740555	CG34293	Dmel_CG34293	NP_001287557.1	84	uncharacterized protein Dmel_CG34293, isoform B
3R	NT_033777.3	27165804	27166997	+	318579	spn-D	Dmel_CG31069	NP_733200.1	270	spindle D
3R	NT_033777.3	27172991	27191742	-	43275	Ser	Dmel_CG6127	NP_001287558.1	1407	serrate, isoform B
3R	NT_033777.3	27172991	27191742	-	43275	Ser	Dmel_CG6127	NP_524527.3	1407	serrate, isoform A
3R	NT_033777.3	27227707	27228471	-	43276	CG42813	Dmel_CG42813	NP_733202.2	212	uncharacterized protein Dmel_CG42813, isoform A
3R	NT_033777.3	27227707	27228471	-	43276	CG42813	Dmel_CG42813	NP_001303547.1	212	uncharacterized protein Dmel_CG42813, isoform B
3R	NT_033777.3	27228719	27229432	-	10178958	CG42814	Dmel_CG42814	NP_001189301.1	237	uncharacterized protein Dmel_CG42814
3R	NT_033777.3	27229817	27237823	-	43277	CG31064	Dmel_CG31064	NP_001287560.1	877	uncharacterized protein Dmel_CG31064, isoform G
3R	NT_033777.3	27229817	27238900	-	43277	CG31064	Dmel_CG31064	NP_733203.1	729	uncharacterized protein Dmel_CG31064, isoform B
3R	NT_033777.3	27231660	27237823	-	43277	CG31064	Dmel_CG31064	NP_651545.2	862	uncharacterized protein Dmel_CG31064, isoform E
3R	NT_033777.3	27231660	27237823	-	43277	CG31064	Dmel_CG31064	NP_001287559.1	815	uncharacterized protein Dmel_CG31064, isoform F
3R	NT_033777.3	27231660	27238900	-	43277	CG31064	Dmel_CG31064	NP_733204.1	667	uncharacterized protein Dmel_CG31064, isoform A
3R	NT_033777.3	27231914	27237823	-	43277	CG31064	Dmel_CG31064	NP_001303548.1	700	uncharacterized protein Dmel_CG31064, isoform H
3R	NT_033777.3	27233772	27236271	+	318578	CG31068	Dmel_CG31068	NP_733205.3	751	uncharacterized protein Dmel_CG31068, isoform C
3R	NT_033777.3	27233772	27236271	+	318578	CG31068	Dmel_CG31068	NP_001189302.1	750	uncharacterized protein Dmel_CG31068, isoform B
3R	NT_033777.3	27239274	27241103	+	43278	DNApol-alpha73	Dmel_CG5923	NP_733206.3	609	DNA polymerase alpha 73kD
3R	NT_033777.3	27241332	27242216	+	43279	CG17991	Dmel_CG17991	NP_651547.1	294	uncharacterized protein Dmel_CG17991
3R	NT_033777.3	27242710	27243828	-	59150	CG18766	Dmel_CG18766	NP_733207.1	308	uncharacterized protein Dmel_CG18766, isoform B
3R	NT_033777.3	27242710	27243828	-	59150	CG18766	Dmel_CG18766	NP_652657.1	308	uncharacterized protein Dmel_CG18766, isoform A
3R	NT_033777.3	27242710	27243828	-	59150	CG18766	Dmel_CG18766	NP_001263007.1	308	uncharacterized protein Dmel_CG18766, isoform C
3R	NT_033777.3	27246860	27247818	-	43281	CG5984	Dmel_CG5984	NP_651548.1	271	CG5984
3R	NT_033777.3	27248368	27250832	-	43282	CG5987	Dmel_CG5987	NP_651549.1	720	CG5987
3R	NT_033777.3	27251331	27252957	-	43283	pll	Dmel_CG5974	NP_001263008.1	501	pelle, isoform B
3R	NT_033777.3	27251331	27252957	-	43283	pll	Dmel_CG5974	NP_476971.1	501	pelle, isoform A
3R	NT_033777.3	27253602	27256141	+	43284	TfIIA-L	Dmel_CG5930	NP_476996.1	363	transcription factor IIA L, isoform B
3R	NT_033777.3	27253602	27256141	+	43284	TfIIA-L	Dmel_CG5930	NP_476995.1	366	transcription factor IIA L, isoform A
3R	NT_033777.3	27254621	27256141	+	43284	TfIIA-L	Dmel_CG5930	NP_733208.1	324	transcription factor IIA L, isoform C
3R	NT_033777.3	27257306	27263392	-	47249	woc	Dmel_CG5965	NP_001263010.1	1702	without children, isoform E
3R	NT_033777.3	27257306	27263392	-	47249	woc	Dmel_CG5965	NP_001263009.1	1687	without children, isoform D
3R	NT_033777.3	27257306	27259880	-	47249	woc	Dmel_CG5965	NP_001247326.1	712	without children, isoform C
3R	NT_033777.3	27257306	27263392	-	47249	woc	Dmel_CG5965	NP_524886.2	1688	without children, isoform A
3R	NT_033777.3	27257306	27263392	-	47249	woc	Dmel_CG5965	NP_001097946.1	1703	without children, isoform B
3R	NT_033777.3	27264415	27265406	-	43286	CG14262	Dmel_CG14262	NP_651550.1	312	uncharacterized protein Dmel_CG14262
3R	NT_033777.3	27265487	27266284	+	43287	CG14260	Dmel_CG14260	NP_651551.1	249	uncharacterized protein Dmel_CG14260, isoform A
3R	NT_033777.3	27265487	27266051	+	43287	CG14260	Dmel_CG14260	NP_001263011.1	166	uncharacterized protein Dmel_CG14260, isoform B
3R	NT_033777.3	27266503	27271773	-	43288	l(3)mbt	Dmel_CG5954	NP_733209.1	1477	lethal (3) malignant brain tumor
3R	NT_033777.3	27273831	27274315	+	43289	CG5934	Dmel_CG5934	NP_651552.1	135	CG5934
3R	NT_033777.3	27275658	27276737	+	43290	CG5938	Dmel_CG5938	NP_651553.2	168	CG5938, isoform C
3R	NT_033777.3	27275658	27276737	+	43290	CG5938	Dmel_CG5938	NP_733212.1	168	CG5938, isoform D
3R	NT_033777.3	27275658	27276737	+	43290	CG5938	Dmel_CG5938	NP_001097947.2	168	CG5938, isoform F
3R	NT_033777.3	27275658	27276737	+	43290	CG5938	Dmel_CG5938	NP_733211.1	168	CG5938, isoform B
3R	NT_033777.3	27275658	27276737	+	43290	CG5938	Dmel_CG5938	NP_733210.1	168	CG5938, isoform A
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_001247329.1	775	martik, isoform D
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_001247327.1	775	martik, isoform B
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_001247328.1	775	martik, isoform C
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_651554.1	775	martik, isoform A
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_001247330.1	775	martik, isoform E
3R	NT_033777.3	27277590	27279991	-	43291	mrt	Dmel_CG3361	NP_001247331.1	775	martik, isoform F
3R	NT_033777.3	27283842	27287315	+	43292	CG3368	Dmel_CG3368	NP_651555.1	1120	CG3368
3R	NT_033777.3	27287498	27288469	-	43293	bigmax	Dmel_CG3350	NP_651556.2	254	bigmax
3R	NT_033777.3	27288930	27291133	+	43294	Hmu	Dmel_CG3373	NP_477159.1	579	hemomucin
3R	NT_033777.3	27291660	27291956	-	50082	CG3348	Dmel_CG3348	NP_652261.1	98	CG3348, isoform A
3R	NT_033777.3	27291660	27291956	-	50082	CG3348	Dmel_CG3348	NP_001303428.1	98	CG3348, isoform B
3R	NT_033777.3	27294545	27322325	-	43295	CG3339	Dmel_CG3339	NP_001036762.2	4842	CG3339
3R	NT_033777.3	27329815	27330681	-	43296	CG3330	Dmel_CG3330	NP_651558.2	288	CG3330
3R	NT_033777.3	27340622	27370980	+	43298	CG42534	Dmel_CG42534	NP_651560.2	1555	uncharacterized protein Dmel_CG42534, isoform C
3R	NT_033777.3	27359390	27370980	+	43298	CG42534	Dmel_CG42534	NP_001247333.1	1430	uncharacterized protein Dmel_CG42534, isoform D
3R	NT_033777.3	27376582	27418525	-	43300	side	Dmel_CG31062	NP_524530.2	939	sidestep, isoform A
3R	NT_033777.3	27376582	27418525	-	43300	side	Dmel_CG31062	NP_001247335.1	943	sidestep, isoform D
3R	NT_033777.3	27376582	27418525	-	43300	side	Dmel_CG31062	NP_001247334.1	986	sidestep, isoform C
3R	NT_033777.3	27382273	27418525	-	43300	side	Dmel_CG31062	NP_001138117.1	929	sidestep, isoform B
3R	NT_033777.3	27438962	27440905	-	19835591	CG44290	Dmel_CG44290	NP_001287561.1	69	uncharacterized protein Dmel_CG44290
3R	NT_033777.3	27440407	27440604	+	12798275	CG43447	Dmel_CG43447	NP_001247336.1	65	uncharacterized protein Dmel_CG43447
3R	NT_033777.3	27464257	27467003	+	43303	CG13978	Dmel_CG13978	NP_651562.2	898	uncharacterized protein Dmel_CG13978
3R	NT_033777.3	27478707	27480289	+	43304	Cyp6a18	Dmel_CG13977	NP_651563.1	507	Cyp6a18, isoform A
3R	NT_033777.3	27478707	27480289	+	43304	Cyp6a18	Dmel_CG13977	NP_001287562.1	507	Cyp6a18, isoform B
3R	NT_033777.3	27488206	27489504	+	43305	Gr98a	Dmel_CG13976	NP_651564.1	391	gustatory receptor 98a
3R	NT_033777.3	27501592	27501985	-	12798276	CG43139	Dmel_CG43139	NP_001247337.1	111	uncharacterized protein Dmel_CG43139, isoform A
3R	NT_033777.3	27501592	27501985	-	12798276	CG43139	Dmel_CG43139	NP_001247338.1	111	uncharacterized protein Dmel_CG43139, isoform B
3R	NT_033777.3	27502212	27502928	-	43306	CG5402	Dmel_CG5402	NP_651565.1	154	CG5402
3R	NT_033777.3	27515911	27517257	-	43307	CG13972	Dmel_CG13972	NP_651566.1	448	uncharacterized protein Dmel_CG13972
3R	NT_033777.3	27531017	27533582	+	43308	CG12885	Dmel_CG12885	NP_651567.2	788	uncharacterized protein Dmel_CG12885, isoform A
3R	NT_033777.3	27531017	27533582	+	43308	CG12885	Dmel_CG12885	NP_001263012.1	788	uncharacterized protein Dmel_CG12885, isoform B
3R	NT_033777.3	27542497	27543888	+	117327	Gr98b	Dmel_CG31059	NP_733213.1	403	gustatory receptor 98b
3R	NT_033777.3	27544443	27545836	+	117336	Gr98c	Dmel_CG31060	NP_524531.2	408	gustatory receptor 98c
3R	NT_033777.3	27546052	27547462	+	43309	Gr98d	Dmel_CG31061	NP_733214.1	412	gustatory receptor 98d
3R	NT_033777.3	27548734	27558372	-	43310	Klp98A	Dmel_CG5658	NP_001247339.1	1224	Kinesin-like protein at 98A, isoform B
3R	NT_033777.3	27548734	27558372	-	43310	Klp98A	Dmel_CG5658	NP_524532.2	1265	Kinesin-like protein at 98A, isoform A
3R	NT_033777.3	27559641	27561220	-	43311	CG5646	Dmel_CG5646	NP_651568.1	303	CG5646
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_733216.1	524	widerborst, isoform B
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_733218.1	524	widerborst, isoform E
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_733217.1	524	widerborst, isoform D
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_733219.1	524	widerborst, isoform F
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_651569.1	524	widerborst, isoform C
3R	NT_033777.3	27565569	27567554	-	43312	wdb	Dmel_CG5643	NP_733215.1	524	widerborst, isoform A
3R	NT_033777.3	27583088	27585322	+	53569	pins	Dmel_CG5692	NP_524999.2	658	partner of inscuteable
3R	NT_033777.3	27586686	27593538	-	43314	CG5639	Dmel_CG5639	NP_651570.1	1511	CG5639
3R	NT_033777.3	27599035	27607040	-	43315	dsd	Dmel_CG5634	NP_001263013.1	1323	distracted, isoform C
3R	NT_033777.3	27599035	27607040	-	43315	dsd	Dmel_CG5634	NP_651571.3	1323	distracted, isoform B
3R	NT_033777.3	27615395	27634026	+	43317	Tusp	Dmel_CG5586	NP_001189303.1	1432	tusp, isoform E
3R	NT_033777.3	27615395	27634026	+	43317	Tusp	Dmel_CG5586	NP_001263014.1	1433	tusp, isoform F
3R	NT_033777.3	27615395	27634026	+	43317	Tusp	Dmel_CG5586	NP_651573.4	1432	tusp, isoform D
3R	NT_033777.3	27615395	27634026	+	43317	Tusp	Dmel_CG5586	NP_001263015.1	1430	tusp, isoform G
3R	NT_033777.3	27623482	27625914	-	43316	CG5612	Dmel_CG5612	NP_651572.2	428	CG5612
3R	NT_033777.3	27634998	27636039	-	43318	CG5611	Dmel_CG5611	NP_651574.1	326	CG5611, isoform A
3R	NT_033777.3	27634998	27636039	-	43318	CG5611	Dmel_CG5611	NP_001263016.2	326	CG5611, isoform C
3R	NT_033777.3	27637888	27638700	+	43319	Mtl	Dmel_CG5588	NP_733222.1	195	Mig-2-like, isoform A
3R	NT_033777.3	27637888	27638700	+	43319	Mtl	Dmel_CG5588	NP_733223.1	195	Mig-2-like, isoform C
3R	NT_033777.3	27637888	27638700	+	43319	Mtl	Dmel_CG5588	NP_524533.1	195	Mig-2-like, isoform B
3R	NT_033777.3	27640111	27656449	-	326116	tau	Dmel_CG45110	NP_001287563.1	403	tau, isoform F
3R	NT_033777.3	27640111	27656449	-	326116	tau	Dmel_CG45110	NP_001287565.1	350	tau, isoform I
3R	NT_033777.3	27640111	27656449	-	326116	tau	Dmel_CG45110	NP_001287564.1	288	tau, isoform H
3R	NT_033777.3	27641435	27656449	-	326116	tau	Dmel_CG45110	NP_651575.1	361	tau, isoform A
3R	NT_033777.3	27641435	27646635	-	326116	tau	Dmel_CG45110	NP_001287567.1	278	tau, isoform L
3R	NT_033777.3	27641435	27649061	-	326116	tau	Dmel_CG45110	NP_733224.2	717	tau, isoform G
3R	NT_033777.3	27641435	27646635	-	326116	tau	Dmel_CG45110	NP_001287566.1	278	tau, isoform K
3R	NT_033777.3	27641435	27656449	-	326116	tau	Dmel_CG45110	NP_001263019.2	308	tau, isoform J
3R	NT_033777.3	27641435	27656449	-	326116	tau	Dmel_CG45110	NP_001263017.1	361	tau, isoform B
3R	NT_033777.3	27641435	27656449	-	326116	tau	Dmel_CG45110	NP_001287568.1	367	tau, isoform M
3R	NT_033777.3	27642034	27656449	-	326116	tau	Dmel_CG45110	NP_001263018.1	349	tau, isoform C
3R	NT_033777.3	27642837	27656449	-	326116	tau	Dmel_CG45110	NP_001303549.1	375	tau, isoform N
3R	NT_033777.3	27651569	27656449	-	326116	tau	Dmel_CG45110	NP_001263020.1	93	tau, isoform E
3R	NT_033777.3	27652836	27653327	+	43321	RpS10a	Dmel_CG12275	NP_651576.1	163	ribosomal protein S10a
3R	NT_033777.3	27657912	27660112	-	43323	Mlc1	Dmel_CG5596	NP_476639.1	155	myosin alkali light chain 1, isoform A
3R	NT_033777.3	27658070	27660112	-	43323	Mlc1	Dmel_CG5596	NP_476640.1	155	myosin alkali light chain 1, isoform B
3R	NT_033777.3	27658070	27660112	-	43323	Mlc1	Dmel_CG5596	NP_001287569.1	155	myosin alkali light chain 1, isoform D
3R	NT_033777.3	27663196	27676931	+	43324	unc80	Dmel_CG18437	NP_001263025.1	3315	uncoordinated 80, isoform G
3R	NT_033777.3	27663196	27676895	+	43324	unc80	Dmel_CG18437	NP_651577.4	3303	uncoordinated 80, isoform C
3R	NT_033777.3	27663196	27676895	+	43324	unc80	Dmel_CG18437	NP_001263024.1	3332	uncoordinated 80, isoform F
3R	NT_033777.3	27663196	27676895	+	43324	unc80	Dmel_CG18437	NP_001263022.1	3284	uncoordinated 80, isoform D
3R	NT_033777.3	27663196	27676895	+	43324	unc80	Dmel_CG18437	NP_001263023.1	3309	uncoordinated 80, isoform E
3R	NT_033777.3	27677684	27678922	+	43325	CG5590	Dmel_CG5590	NP_651578.1	412	CG5590
3R	NT_033777.3	27679410	27679953	+	43326	CG12883	Dmel_CG12883	NP_651579.1	157	uncharacterized protein Dmel_CG12883
3R	NT_033777.3	27680551	27681915	-	43327	Sce	Dmel_CG5595	NP_477509.1	435	Sex combs extra
3R	NT_033777.3	27686186	27692113	+	43328	CG12880	Dmel_CG12880	NP_651580.3	330	uncharacterized protein Dmel_CG12880
3R	NT_033777.3	27686295	27687999	-	318574	CG31055	Dmel_CG31055	NP_733227.1	424	uncharacterized protein Dmel_CG31055, isoform B
3R	NT_033777.3	27686295	27688035	-	318574	CG31055	Dmel_CG31055	NP_733225.1	415	uncharacterized protein Dmel_CG31055, isoform A
3R	NT_033777.3	27686295	27688035	-	318574	CG31055	Dmel_CG31055	NP_733226.1	436	uncharacterized protein Dmel_CG31055, isoform C
3R	NT_033777.3	27694318	27694491	+	12798278	CG43319	Dmel_CG43319	NP_001247340.1	57	uncharacterized protein Dmel_CG43319
3R	NT_033777.3	27694895	27694972	+	12798279	Acp98AB	Dmel_CG43619	NP_001263026.1	25	accessory gland protein 98AB
3R	NT_033777.3	27695255	27696451	+	43329	CG43320	Dmel_CG43320	NP_651581.2	398	uncharacterized protein Dmel_CG43320
3R	NT_033777.3	27696716	27699979	-	43330	ALiX	Dmel_CG12876	NP_651582.1	836	ALG-2 interacting protein X
3R	NT_033777.3	27700585	27702933	+	43331	btz	Dmel_CG12878	NP_733229.2	782	barentsz, isoform B
3R	NT_033777.3	27700648	27703068	+	43331	btz	Dmel_CG12878	NP_001263028.1	806	barentsz, isoform D
3R	NT_033777.3	27700648	27702933	+	43331	btz	Dmel_CG12878	NP_001263027.1	761	barentsz, isoform C
3R	NT_033777.3	27700648	27702933	+	43331	btz	Dmel_CG12878	NP_524534.1	761	barentsz, isoform A
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_733233.1	618	uncharacterized protein Dmel_CG12428, isoform E
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_733231.1	618	uncharacterized protein Dmel_CG12428, isoform B
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_733230.1	618	uncharacterized protein Dmel_CG12428, isoform A
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_001334705.1	618	uncharacterized protein Dmel_CG12428, isoform G
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_001334704.1	618	uncharacterized protein Dmel_CG12428, isoform F
3R	NT_033777.3	27703724	27705841	-	43332	CG12428	Dmel_CG12428	NP_733232.1	618	uncharacterized protein Dmel_CG12428, isoform D
3R	NT_033777.3	27707210	27710693	+	43333	CG12877	Dmel_CG12877	NP_001034073.1	991	uncharacterized protein Dmel_CG12877
3R	NT_033777.3	27737092	27747075	+	43334	Ets98B	Dmel_CG5583	NP_524535.2	518	Ets at 98B, isoform A
3R	NT_033777.3	27743751	27747075	+	43334	Ets98B	Dmel_CG5583	NP_001287570.1	504	Ets at 98B, isoform B
3R	NT_033777.3	27769990	27834119	-	5740590	CG34353	Dmel_CG34353	NP_001097949.1	566	uncharacterized protein Dmel_CG34353, isoform A
3R	NT_033777.3	27769990	27834119	-	5740590	CG34353	Dmel_CG34353	NP_001247342.1	566	uncharacterized protein Dmel_CG34353, isoform B
3R	NT_033777.3	27769990	27834119	-	5740590	CG34353	Dmel_CG34353	NP_001287571.1	581	uncharacterized protein Dmel_CG34353, isoform C
3R	NT_033777.3	27845950	27847260	+	43341	Or98a	Dmel_CG5540	NP_524536.2	397	odorant receptor 98a
3R	NT_033777.3	27871611	27872343	-	43342	CG12426	Dmel_CG12426	NP_651591.2	163	uncharacterized protein Dmel_CG12426
3R	NT_033777.3	27912568	27913661	+	43343	mil	Dmel_CG5017	NP_651592.2	283	milkah
3R	NT_033777.3	27914038	27916428	-	43344	CG5003	Dmel_CG5003	NP_651593.1	713	CG5003
3R	NT_033777.3	27917002	27918183	+	43345	mRpS22	Dmel_CG12261	NP_524537.1	393	mitochondrial ribosomal protein S22
3R	NT_033777.3	27918258	27919283	-	338395	CG33213	Dmel_CG33213	NP_788749.1	341	uncharacterized protein Dmel_CG33213
3R	NT_033777.3	27919915	27920994	-	43347	CG12259	Dmel_CG12259	NP_651595.1	359	uncharacterized protein Dmel_CG12259
3R	NT_033777.3	27921370	27922273	-	43348	BCAS2	Dmel_CG4980	NP_651596.1	278	BCAS2
3R	NT_033777.3	27922917	27924790	+	43349	RpL4	Dmel_CG5502	NP_524538.2	401	ribosomal protein L4
3R	NT_033777.3	27925881	27932670	+	43350	mino	Dmel_CG5508	NP_651597.1	850	minotaur, isoform A
3R	NT_033777.3	27925881	27932670	+	43350	mino	Dmel_CG5508	NP_001247343.2	850	minotaur, isoform E
3R	NT_033777.3	27927497	27928156	-	318572	CG31053	Dmel_CG31053	NP_733236.1	219	uncharacterized protein Dmel_CG31053
3R	NT_033777.3	27929858	27932670	+	43350	mino	Dmel_CG5508	NP_733237.1	786	minotaur, isoform C
3R	NT_033777.3	27930029	27932670	+	43350	mino	Dmel_CG5508	NP_733238.1	757	minotaur, isoform B
3R	NT_033777.3	27933183	27937749	-	43351	NSD	Dmel_CG4976	NP_001263029.1	1423	nuclear receptor binding SET domain protein, isoform B
3R	NT_033777.3	27933183	27937749	-	43351	NSD	Dmel_CG4976	NP_733239.1	1427	nuclear receptor binding SET domain protein, isoform A
3R	NT_033777.3	27938695	27942718	+	43352	BOD1	Dmel_CG5514	NP_651599.1	1150	biorientation defective 1, isoform B
3R	NT_033777.3	27938695	27942718	+	43352	BOD1	Dmel_CG5514	NP_001263031.1	1151	biorientation defective 1, isoform E
3R	NT_033777.3	27938695	27942718	+	43352	BOD1	Dmel_CG5514	NP_001263030.1	1150	biorientation defective 1, isoform D
3R	NT_033777.3	27938695	27942442	+	43352	BOD1	Dmel_CG5514	NP_001163751.1	1109	biorientation defective 1, isoform C
3R	NT_033777.3	27938695	27942442	+	43352	BOD1	Dmel_CG5514	NP_733240.1	1109	biorientation defective 1, isoform A
3R	NT_033777.3	27943982	27947310	-	43353	mfrn	Dmel_CG4963	NP_651600.1	379	mitoferrin
3R	NT_033777.3	27948862	27951825	+	43354	Gp93	Dmel_CG5520	NP_651601.1	787	glycoprotein 93
3R	NT_033777.3	27952241	27954052	-	43355	CG4951	Dmel_CG4951	NP_001097950.1	446	CG4951, isoform B
3R	NT_033777.3	27952753	27954052	-	43355	CG4951	Dmel_CG4951	NP_651602.1	320	CG4951, isoform A
3R	NT_033777.3	27955021	27957238	+	43356	CG5527	Dmel_CG5527	NP_651603.1	717	CG5527
3R	NT_033777.3	27957416	27958099	-	8674056	CG42487	Dmel_CG42487	NP_651604.1	189	CG4884, isoform A
3R	NT_033777.3	27957416	27958099	-	8674056	CG42487	Dmel_CG42487	NP_001287572.1	189	CG4884, isoform B
3R	NT_033777.3	27958188	27959175	-	8674056	CG42487	Dmel_CG42487	NP_001163752.1	309	uncharacterized protein Dmel_CG42487
3R	NT_033777.3	27959395	27960534	-	318646	CG31253	Dmel_CG31253	NP_733241.2	379	uncharacterized protein Dmel_CG31253
3R	NT_033777.3	27962041	27963180	-	318603	CG31131	Dmel_CG31131	NP_733243.2	379	uncharacterized protein Dmel_CG31131
3R	NT_033777.3	27963688	27966910	+	43358	CG4849	Dmel_CG4849	NP_651605.1	975	CG4849
3R	NT_033777.3	27967106	27988155	-	43359	betaTub97EF	Dmel_CG4869	NP_001163753.1	457	beta-Tubulin at 97EF, isoform B
3R	NT_033777.3	27967106	27988155	-	43359	betaTub97EF	Dmel_CG4869	NP_651606.2	457	beta-Tubulin at 97EF, isoform C
3R	NT_033777.3	27989766	27990563	-	43360	CG4815	Dmel_CG4815	NP_651607.1	265	CG4815
3R	NT_033777.3	28030688	28085434	+	43362	trv	Dmel_CG34362	NP_001163754.3	651	trivet, isoform I
3R	NT_033777.3	28049817	28085434	+	43362	trv	Dmel_CG34362	NP_001263033.1	498	trivet, isoform F
3R	NT_033777.3	28049817	28085434	+	43362	trv	Dmel_CG34362	NP_651609.1	505	trivet, isoform A
3R	NT_033777.3	28049817	28084655	+	43362	trv	Dmel_CG34362	NP_001287573.1	508	trivet, isoform J
3R	NT_033777.3	28049817	28086928	+	43362	trv	Dmel_CG34362	NP_001263032.1	509	trivet, isoform E
3R	NT_033777.3	28147972	28237774	+	5740528	CG34354	Dmel_CG34354	NP_001163755.2	431	uncharacterized protein Dmel_CG34354, isoform D
3R	NT_033777.3	28147972	28238131	+	5740528	CG34354	Dmel_CG34354	NP_001097953.2	550	uncharacterized protein Dmel_CG34354, isoform F
3R	NT_033777.3	28147972	28237774	+	5740528	CG34354	Dmel_CG34354	NP_001163756.2	431	uncharacterized protein Dmel_CG34354, isoform E
3R	NT_033777.3	28147972	28237783	+	5740528	CG34354	Dmel_CG34354	NP_001303550.1	434	uncharacterized protein Dmel_CG34354, isoform G
3R	NT_033777.3	28262735	28263622	-	12798281	CG43125	Dmel_CG43125	NP_001247344.1	258	uncharacterized protein Dmel_CG43125
3R	NT_033777.3	28263888	28264744	-	12798282	CG43124	Dmel_CG43124	NP_001247345.1	245	uncharacterized protein Dmel_CG43124
3R	NT_033777.3	28282586	28283514	+	5740743	CG34436	Dmel_CG34436	NP_001097954.1	270	uncharacterized protein Dmel_CG34436
3R	NT_033777.3	28283750	28284681	+	5740179	CG34437	Dmel_CG34437	NP_001097955.1	266	uncharacterized protein Dmel_CG34437
3R	NT_033777.3	28291459	28292463	+	47854	Mst98Ca	Dmel_CG11719	NP_524899.1	334	Male-specific RNA 98Ca
3R	NT_033777.3	28292915	28293712	+	43367	Mst98Cb	Dmel_CG18396	NP_524539.1	265	Male-specific RNA 98Cb
3R	NT_033777.3	28294134	28294469	+	43369	UQCR-14L	Dmel_CG17856	NP_651614.1	111	Ubiquinol-cytochrome c reductase 14 kDa subunit-like
3R	NT_033777.3	28303665	28304567	-	43370	CG12516	Dmel_CG12516	NP_651615.2	300	uncharacterized protein Dmel_CG12516
3R	NT_033777.3	28320582	28323734	-	53567	larp	Dmel_CG42551	NP_001163757.1	965	La related protein, isoform E
3R	NT_033777.3	28320582	28334518	-	53567	larp	Dmel_CG42551	NP_001247347.1	1673	La related protein, isoform G
3R	NT_033777.3	28320582	28334518	-	53567	larp	Dmel_CG42551	NP_001247348.1	1673	La related protein, isoform H
3R	NT_033777.3	28320582	28330798	-	53567	larp	Dmel_CG42551	NP_001247346.1	1409	La related protein, isoform F
3R	NT_033777.3	28320582	28323734	-	53567	larp	Dmel_CG42551	NP_524998.1	965	La related protein, isoform A
3R	NT_033777.3	28320582	28323734	-	53567	larp	Dmel_CG42551	NP_733245.1	965	La related protein, isoform B
3R	NT_033777.3	28320582	28334518	-	53567	larp	Dmel_CG42551	NP_733244.5	1673	La related protein, isoform D
3R	NT_033777.3	28337293	28339546	-	43373	Gfat2	Dmel_CG1345	NP_651617.1	683	Glutamine:fructose-6-phosphate aminotransferase 2
3R	NT_033777.3	28340435	28345015	+	43374	Moca-cyp	Dmel_CG1866	NP_733246.1	970	Moca-cyp, isoform A
3R	NT_033777.3	28342898	28345015	+	43374	Moca-cyp	Dmel_CG1866	NP_001163758.1	685	Moca-cyp, isoform C
3R	NT_033777.3	28342898	28345015	+	43374	Moca-cyp	Dmel_CG1866	NP_651618.3	685	Moca-cyp, isoform B
3R	NT_033777.3	28352242	28353620	+	43375	Or98b	Dmel_CG1867	NP_524540.4	383	odorant receptor 98b, partial
3R	NT_033777.3	28462055	28473027	+	43377	beat-VI	Dmel_CG14064	NP_001263035.1	332	beat-VI, isoform B
3R	NT_033777.3	28462055	28473027	+	43377	beat-VI	Dmel_CG14064	NP_651619.1	332	beat-VI, isoform A
3R	NT_033777.3	28484652	28485998	+	43378	CG1894	Dmel_CG1894	NP_651620.1	421	CG1894
3R	NT_033777.3	28487483	28519321	+	43379	Dhc98D	Dmel_CG1842	NP_001163759.1	5073	dynein heavy chain at 89D, isoform C
3R	NT_033777.3	28487483	28519321	+	43379	Dhc98D	Dmel_CG1842	NP_524541.3	5080	dynein heavy chain at 89D, isoform B
3R	NT_033777.3	28492384	28519321	+	43379	Dhc98D	Dmel_CG1842	NP_001263036.1	4445	dynein heavy chain at 89D, isoform D
3R	NT_033777.3	28519656	28520427	-	261634	CG31051	Dmel_CG31051	NP_733247.1	212	uncharacterized protein Dmel_CG31051, isoform A
3R	NT_033777.3	28519656	28520427	-	261634	CG31051	Dmel_CG31051	NP_001263037.1	218	uncharacterized protein Dmel_CG31051, isoform B
3R	NT_033777.3	28521129	28539941	-	43872	Ppn	Dmel_CG33103	NP_001163761.1	2841	papilin, isoform G
3R	NT_033777.3	28521129	28539941	-	43872	Ppn	Dmel_CG33103	NP_001163760.1	2174	papilin, isoform C
3R	NT_033777.3	28521129	28539941	-	43872	Ppn	Dmel_CG33103	NP_788751.2	2776	papilin, isoform F
3R	NT_033777.3	28521129	28539941	-	43872	Ppn	Dmel_CG33103	NP_788752.2	2898	papilin, isoform E
3R	NT_033777.3	28542346	28544725	-	43382	CG12413	Dmel_CG12413	NP_651621.2	696	uncharacterized protein Dmel_CG12413
3R	NT_033777.3	28582475	28584553	-	43383	fkh	Dmel_CG10002	NP_001263038.1	692	fork head, isoform C
3R	NT_033777.3	28582997	28584553	-	43383	fkh	Dmel_CG10002	NP_001303461.1	518	fork head, isoform E
3R	NT_033777.3	28583021	28584553	-	43383	fkh	Dmel_CG10002	NP_524542.1	510	fork head, isoform A
3R	NT_033777.3	28583021	28584553	-	43383	fkh	Dmel_CG10002	NP_001163762.1	510	fork head, isoform B
3R	NT_033777.3	28583021	28584553	-	43383	fkh	Dmel_CG10002	NP_001287574.1	510	fork head, isoform D
3R	NT_033777.3	28598182	28599221	-	43384	Noa36	Dmel_CG10009	NP_651622.2	315	Noa36
3R	NT_033777.3	28599952	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_733250.1	360	heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
3R	NT_033777.3	28599952	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_733249.1	364	heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
3R	NT_033777.3	28600518	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_733252.1	361	heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
3R	NT_033777.3	28600518	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_733253.1	361	heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
3R	NT_033777.3	28600518	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_733251.1	365	heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
3R	NT_033777.3	28600518	28603681	+	43385	Hrb98DE	Dmel_CG9983	NP_524543.1	365	heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
3R	NT_033777.3	28606168	28607890	+	43386	CG9986	Dmel_CG9986	NP_651623.1	535	CG9986
3R	NT_033777.3	28609395	28616026	-	43387	CG10011	Dmel_CG10011	NP_651624.2	2119	uncharacterized protein Dmel_CG10011
3R	NT_033777.3	28636423	28638544	+	43388	CG9988	Dmel_CG9988	NP_651625.1	668	CG9988
3R	NT_033777.3	28641721	28642888	-	43389	CG14062	Dmel_CG14062	NP_001034074.1	346	uncharacterized protein Dmel_CG14062
3R	NT_033777.3	28650143	28650446	-	318571	CG31050	Dmel_CG31050	NP_001263039.1	81	uncharacterized protein Dmel_CG31050, isoform B
3R	NT_033777.3	28650143	28650446	-	318571	CG31050	Dmel_CG31050	NP_733254.1	81	uncharacterized protein Dmel_CG31050, isoform A
3R	NT_033777.3	28669233	28670451	+	2768690	CG33346	Dmel_CG33346	NP_996301.2	364	uncharacterized protein Dmel_CG33346
3R	NT_033777.3	28670738	28671954	+	43390	Sid	Dmel_CG9989	NP_651627.1	370	stress induced DNase
3R	NT_033777.3	28675579	28695158	+	43391	CG9990	Dmel_CG9990	NP_651628.1	808	CG9990, isoform A
3R	NT_033777.3	28686438	28695158	+	43391	CG9990	Dmel_CG9990	NP_001247351.1	775	CG9990, isoform F
3R	NT_033777.3	28686438	28695158	+	43391	CG9990	Dmel_CG9990	NP_733255.1	777	CG9990, isoform B
3R	NT_033777.3	28686438	28695158	+	43391	CG9990	Dmel_CG9990	NP_001189305.1	763	CG9990, isoform D
3R	NT_033777.3	28690230	28695158	+	43391	CG9990	Dmel_CG9990	NP_001247350.1	766	CG9990, isoform E
3R	NT_033777.3	28690230	28695158	+	43391	CG9990	Dmel_CG9990	NP_001263040.1	764	CG9990, isoform G
3R	NT_033777.3	28696332	28733614	+	43392	htt	Dmel_CG9995	NP_001263041.1	3583	huntingtin, isoform B
3R	NT_033777.3	28696332	28733614	+	43392	htt	Dmel_CG9995	NP_651629.1	3583	huntingtin, isoform A
3R	NT_033777.3	28737551	28744025	-	43393	AstA-R2	Dmel_CG10001	NP_524544.1	357	allatostatin A receptor 2, isoform A
3R	NT_033777.3	28737551	28744025	-	43393	AstA-R2	Dmel_CG10001	NP_001263042.1	357	allatostatin A receptor 2, isoform C
3R	NT_033777.3	28738598	28744025	-	43393	AstA-R2	Dmel_CG10001	NP_001247352.1	350	allatostatin A receptor 2, isoform B
3R	NT_033777.3	28749212	28751569	-	43394	CG10000	Dmel_CG10000	NP_651630.3	558	uncharacterized protein Dmel_CG10000
3R	NT_033777.3	28755987	28756979	-	43395	CG9997	Dmel_CG9997	NP_001263043.1	330	CG9997, isoform B
3R	NT_033777.3	28755987	28756979	-	43395	CG9997	Dmel_CG9997	NP_651631.1	330	CG9997, isoform A
3R	NT_033777.3	28757134	28758234	-	43396	aqrs	Dmel_CG14061	NP_651632.2	366	aquarius
3R	NT_033777.3	28789617	28790483	+	5740413	CG34295	Dmel_CG34295	NP_001097956.1	288	uncharacterized protein Dmel_CG34295
3R	NT_033777.3	28790522	28791418	+	43397	intr	Dmel_CG12558	NP_651633.1	298	intrepid
3R	NT_033777.3	28806726	28807433	+	50092	CheB98a	Dmel_CG14531	NP_652269.3	197	chemosensory protein A 98a
3R	NT_033777.3	28808305	28811085	-	43398	wdn	Dmel_CG1454	NP_476900.1	869	wings down
3R	NT_033777.3	28812115	28817163	+	43399	CG1646	Dmel_CG1646	NP_733256.2	1066	CG1646, isoform B
3R	NT_033777.3	28812115	28814210	+	43399	CG1646	Dmel_CG1646	NP_001097958.1	501	CG1646, isoform H
3R	NT_033777.3	28812744	28817163	+	43399	CG1646	Dmel_CG1646	NP_788753.1	1009	CG1646, isoform C
3R	NT_033777.3	28812744	28817163	+	43399	CG1646	Dmel_CG1646	NP_651634.1	1009	CG1646, isoform A
3R	NT_033777.3	28812744	28817163	+	43399	CG1646	Dmel_CG1646	NP_001097957.1	1009	CG1646, isoform E
3R	NT_033777.3	28817472	28819514	-	43400	CG1523	Dmel_CG1523	NP_651635.2	621	CG1523
3R	NT_033777.3	28820338	28824191	+	43401	CG1647	Dmel_CG1647	NP_651636.1	1222	CG1647, isoform A
3R	NT_033777.3	28820338	28824191	+	43401	CG1647	Dmel_CG1647	NP_001263044.1	1218	CG1647, isoform B
3R	NT_033777.3	28825450	28830618	-	43402	WASp	Dmel_CG1520	NP_651637.1	527	WASp, isoform A
3R	NT_033777.3	28825450	28830618	-	43402	WASp	Dmel_CG1520	NP_001263045.1	527	WASp, isoform D
3R	NT_033777.3	28825450	28830618	-	43402	WASp	Dmel_CG1520	NP_733257.1	527	WASp, isoform B
3R	NT_033777.3	28825450	28827302	-	43402	WASp	Dmel_CG1520	NP_788755.1	494	WASp, isoform C
3R	NT_033777.3	28833235	28840761	-	44642	Apc	Dmel_CG1451	NP_477152.1	2417	APC-like, isoform A
3R	NT_033777.3	28833235	28840761	-	44642	Apc	Dmel_CG1451	NP_001263046.1	2417	APC-like, isoform B
3R	NT_033777.3	28835696	28840761	-	44642	Apc	Dmel_CG1451	NP_001303423.1	1597	APC-like, isoform C
3R	NT_033777.3	28845967	28869063	+	43404	spg	Dmel_CG31048	NP_001263047.1	2008	sponge, isoform F
3R	NT_033777.3	28845967	28869063	+	43404	spg	Dmel_CG31048	NP_001263048.1	2008	sponge, isoform G
3R	NT_033777.3	28845967	28869618	+	43404	spg	Dmel_CG31048	NP_733258.4	2187	sponge, isoform E
3R	NT_033777.3	28845967	28869063	+	43404	spg	Dmel_CG31048	NP_001263049.1	2002	sponge, isoform H
3R	NT_033777.3	28845967	28869063	+	43404	spg	Dmel_CG31048	NP_001138118.2	2002	sponge, isoform D
3R	NT_033777.3	28854461	28857305	-	44266	Inx3	Dmel_CG1448	NP_001263050.1	395	innexin 3, isoform B
3R	NT_033777.3	28854461	28857305	-	44266	Inx3	Dmel_CG1448	NP_524730.1	395	innexin 3, isoform A
3R	NT_033777.3	28854461	28857305	-	44266	Inx3	Dmel_CG1448	NP_001287575.1	395	innexin 3, isoform C
3R	NT_033777.3	28871859	28886916	-	43414	CG33203	Dmel_CG33203	NP_001138119.2	500	uncharacterized protein Dmel_CG33203, isoform F
3R	NT_033777.3	28872000	28886916	-	43414	CG33203	Dmel_CG33203	NP_001163764.1	450	uncharacterized protein Dmel_CG33203, isoform D
3R	NT_033777.3	28872000	28886916	-	43414	CG33203	Dmel_CG33203	NP_001163765.1	453	uncharacterized protein Dmel_CG33203, isoform E
3R	NT_033777.3	28872915	28874960	+	43408	CG14529	Dmel_CG14529	NP_651641.1	681	uncharacterized protein Dmel_CG14529
3R	NT_033777.3	28875646	28877694	+	43410	CG14528	Dmel_CG14528	NP_651643.1	682	uncharacterized protein Dmel_CG14528
3R	NT_033777.3	28878081	28880096	-	43411	CG14523	Dmel_CG14523	NP_651644.1	671	uncharacterized protein Dmel_CG14523
3R	NT_033777.3	28880803	28882905	+	43412	CG14527	Dmel_CG14527	NP_651645.1	700	uncharacterized protein Dmel_CG14527
3R	NT_033777.3	28883693	28885816	+	43413	CG14526	Dmel_CG14526	NP_651646.2	707	uncharacterized protein Dmel_CG14526
3R	NT_033777.3	28888328	28921742	+	43415	Doa	Dmel_CG42320	NP_001036765.1	580	darkener of apricot, isoform N
3R	NT_033777.3	28888328	28921742	+	43415	Doa	Dmel_CG42320	NP_001138120.1	580	darkener of apricot, isoform T
3R	NT_033777.3	28888328	28921742	+	43415	Doa	Dmel_CG42320	NP_001014680.1	580	darkener of apricot, isoform J
3R	NT_033777.3	28888328	28921742	+	43415	Doa	Dmel_CG42320	NP_001138121.1	580	darkener of apricot, isoform U
3R	NT_033777.3	28889766	28921742	+	43415	Doa	Dmel_CG42320	NP_001138122.1	511	darkener of apricot, isoform V
3R	NT_033777.3	28889766	28921742	+	43415	Doa	Dmel_CG42320	NP_001036764.2	580	darkener of apricot, isoform M
3R	NT_033777.3	28889766	28921742	+	43415	Doa	Dmel_CG42320	NP_001014682.1	511	darkener of apricot, isoform S
3R	NT_033777.3	28893432	28921742	+	43415	Doa	Dmel_CG42320	NP_001014678.1	983	darkener of apricot, isoform L
3R	NT_033777.3	28902732	28921742	+	43415	Doa	Dmel_CG42320	NP_001097961.2	398	darkener of apricot, isoform AA
3R	NT_033777.3	28905808	28921742	+	43415	Doa	Dmel_CG42320	NP_001014681.2	2045	darkener of apricot, isoform P
3R	NT_033777.3	28905808	28921742	+	43415	Doa	Dmel_CG42320	NP_001247353.1	889	darkener of apricot, isoform X
3R	NT_033777.3	28907710	28921742	+	43415	Doa	Dmel_CG42320	NP_001036763.2	1535	darkener of apricot, isoform Y
3R	NT_033777.3	28909819	28921742	+	43415	Doa	Dmel_CG42320	NP_001014679.1	832	darkener of apricot, isoform K
3R	NT_033777.3	28912887	28921742	+	43415	Doa	Dmel_CG42320	NP_001247354.1	975	darkener of apricot, isoform Z
3R	NT_033777.3	28912887	28921742	+	43415	Doa	Dmel_CG42320	NP_788758.3	1229	darkener of apricot, isoform R
3R	NT_033777.3	28923120	28924983	+	43416	CG11828	Dmel_CG11828	NP_651648.5	458	uncharacterized protein Dmel_CG11828
3R	NT_033777.3	28925487	28927771	-	43417	DIP-gamma	Dmel_CG14521	NP_651649.1	413	Dpr-interacting protein gamma
3R	NT_033777.3	28993285	28997716	-	43420	wat	Dmel_CG1443	NP_651652.2	517	waterproof
3R	NT_033777.3	29024972	29026075	+	43421	CG14518	Dmel_CG14518	NP_651653.2	179	uncharacterized protein Dmel_CG14518
3R	NT_033777.3	29026480	29027001	-	43422	eIF4E-6	Dmel_CG1442	NP_001189306.1	173	eIF4E-6, isoform B
3R	NT_033777.3	29026480	29027001	-	43422	eIF4E-6	Dmel_CG1442	NP_001189307.1	173	eIF4E-6, isoform C
3R	NT_033777.3	29026480	29027001	-	43422	eIF4E-6	Dmel_CG1442	NP_651654.1	173	eIF4E-6, isoform A
3R	NT_033777.3	29027343	29030329	+	43423	CG1951	Dmel_CG1951	NP_651655.1	835	CG1951
3R	NT_033777.3	29031116	29032533	-	43424	Ssl2	Dmel_CG11833	NP_651656.2	414	strictosidine synthase-like 2
3R	NT_033777.3	29032948	29033919	-	43425	beta4GalNAcTB	Dmel_CG14517	NP_651657.1	323	beta4GalNAcTB
3R	NT_033777.3	29034663	29036992	+	43426	Cpsf100	Dmel_CG1957	NP_651658.1	756	cleavage and polyadenylation specificity factor 100
3R	NT_033777.3	29037083	29038990	-	43427	Slu7	Dmel_CG1420	NP_651659.2	574	Slu7
3R	NT_033777.3	29041272	29046224	+	43428	Pkc98E	Dmel_CG1954	NP_524545.2	739	protein C kinase 98E, isoform A
3R	NT_033777.3	29041272	29046224	+	43428	Pkc98E	Dmel_CG1954	NP_001287577.1	739	protein C kinase 98E, isoform D
3R	NT_033777.3	29041272	29046224	+	43428	Pkc98E	Dmel_CG1954	NP_001287576.1	738	protein C kinase 98E, isoform C
3R	NT_033777.3	29042171	29046224	+	43428	Pkc98E	Dmel_CG1954	NP_001163767.1	554	protein C kinase 98E, isoform B
3R	NT_033777.3	29049600	29050646	+	43429	CG11837	Dmel_CG11837	NP_651660.1	306	uncharacterized protein Dmel_CG11837
3R	NT_033777.3	29051071	29052166	+	43430	CG11841	Dmel_CG11841	NP_651661.1	319	uncharacterized protein Dmel_CG11841
3R	NT_033777.3	29052701	29053776	+	43431	CG11842	Dmel_CG11842	NP_651662.1	319	uncharacterized protein Dmel_CG11842
3R	NT_033777.3	29054548	29055766	+	43432	CG11843	Dmel_CG11843	NP_651663.1	316	uncharacterized protein Dmel_CG11843, isoform A
3R	NT_033777.3	29054548	29055766	+	43432	CG11843	Dmel_CG11843	NP_001287578.1	316	uncharacterized protein Dmel_CG11843, isoform B
3R	NT_033777.3	29056144	29058679	+	43433	Sirt7	Dmel_CG11305	NP_651664.2	771	sirtuin 7
3R	NT_033777.3	29059953	29062890	-	43434	Cul5	Dmel_CG1401	NP_651665.2	852	cullin 5
3R	NT_033777.3	29064582	29106783	+	43435	CG11873	Dmel_CG11873	NP_001263051.1	3003	uncharacterized protein Dmel_CG11873, isoform B
3R	NT_033777.3	29064582	29106702	+	43435	CG11873	Dmel_CG11873	NP_651666.2	2976	uncharacterized protein Dmel_CG11873, isoform A
3R	NT_033777.3	29064582	29106702	+	43435	CG11873	Dmel_CG11873	NP_001263053.1	2976	uncharacterized protein Dmel_CG11873, isoform D
3R	NT_033777.3	29098339	29106702	+	43435	CG11873	Dmel_CG11873	NP_001263052.1	2684	uncharacterized protein Dmel_CG11873, isoform C
3R	NT_033777.3	29109881	29112497	-	43436	alpha-Man-Ib	Dmel_CG11874	NP_651667.1	685	alpha-Mannosidase class I b
3R	NT_033777.3	29113258	29115959	+	43437	CG11876	Dmel_CG11876	NP_651668.1	365	uncharacterized protein Dmel_CG11876, isoform D
3R	NT_033777.3	29113258	29115959	+	43437	CG11876	Dmel_CG11876	NP_733265.1	365	uncharacterized protein Dmel_CG11876, isoform A
3R	NT_033777.3	29113258	29114896	+	43437	CG11876	Dmel_CG11876	NP_733267.1	273	uncharacterized protein Dmel_CG11876, isoform C
3R	NT_033777.3	29113258	29114896	+	43437	CG11876	Dmel_CG11876	NP_733266.1	273	uncharacterized protein Dmel_CG11876, isoform B
3R	NT_033777.3	29116468	29118113	+	43438	Atg14	Dmel_CG11877	NP_651669.1	503	Autophagy-related 14
3R	NT_033777.3	29118585	29122201	-	43439	yem	Dmel_CG14513	NP_001263054.1	1101	yemanuclein, isoform B
3R	NT_033777.3	29118882	29122201	-	43439	yem	Dmel_CG14513	NP_476893.1	1002	yemanuclein, isoform A
3R	NT_033777.3	29125414	29127873	+	43440	CG11880	Dmel_CG11880	NP_733268.1	796	uncharacterized protein Dmel_CG11880, isoform B
3R	NT_033777.3	29125414	29127873	+	43440	CG11880	Dmel_CG11880	NP_651670.1	796	uncharacterized protein Dmel_CG11880, isoform A
3R	NT_033777.3	29125414	29127873	+	43440	CG11880	Dmel_CG11880	NP_733269.1	796	uncharacterized protein Dmel_CG11880, isoform C
3R	NT_033777.3	29128734	29130891	-	43441	dgt6	Dmel_CG11881	NP_651671.1	654	dim gamma-tubulin 6
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733275.1	836	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733270.1	855	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733274.1	836	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733271.1	833	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733272.1	833	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_651672.1	855	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_001163768.1	852	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733276.3	836	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_733273.1	850	vacuolar 
3R	NT_033777.3	29131709	29137686	+	43442	Vha100-1	Dmel_CG1709	NP_001163769.1	852	vacuolar 
3R	NT_033777.3	29138011	29138526	-	43443	CG14512	Dmel_CG14512	NP_651673.1	171	uncharacterized protein Dmel_CG14512
3R	NT_033777.3	29138742	29145498	+	43444	CG14516	Dmel_CG14516	NP_651674.3	999	uncharacterized protein Dmel_CG14516, isoform B
3R	NT_033777.3	29142215	29145498	+	43444	CG14516	Dmel_CG14516	NP_001263055.1	990	uncharacterized protein Dmel_CG14516, isoform C
3R	NT_033777.3	29142215	29145498	+	43444	CG14516	Dmel_CG14516	NP_733277.1	990	uncharacterized protein Dmel_CG14516, isoform A
3R	NT_033777.3	29145833	29146801	-	43445	CG14511	Dmel_CG14511	NP_651675.1	322	uncharacterized protein Dmel_CG14511
3R	NT_033777.3	29147193	29148054	-	43446	CG11882	Dmel_CG11882	NP_001263056.1	263	uncharacterized protein Dmel_CG11882, isoform B
3R	NT_033777.3	29147193	29148054	-	43446	CG11882	Dmel_CG11882	NP_651676.1	263	uncharacterized protein Dmel_CG11882, isoform A
3R	NT_033777.3	29148450	29149735	+	43447	Pglym78	Dmel_CG1721	NP_001034076.1	255	phosphoglyceromutase, isoform B
3R	NT_033777.3	29148450	29149735	+	43447	Pglym78	Dmel_CG1721	NP_524546.2	255	phosphoglyceromutase, isoform A
3R	NT_033777.3	29148450	29149735	+	43447	Pglym78	Dmel_CG1721	NP_001034075.1	255	phosphoglyceromutase, isoform C
3R	NT_033777.3	29149940	29151689	-	64874	eIF2D	Dmel_CG31426	NP_477481.1	563	eukaryotic translation initiation factor 2D
3R	NT_033777.3	29152248	29153139	-	43448	Slbp	Dmel_CG11886	NP_477480.1	276	Stem-loop binding protein
3R	NT_033777.3	29153731	29157113	+	43449	Rpn2	Dmel_CG11888	NP_651677.2	1020	regulatory particle non-ATPase 2, isoform A
3R	NT_033777.3	29153731	29157113	+	43449	Rpn2	Dmel_CG11888	NP_001263058.1	1020	regulatory particle non-ATPase 2, isoform C
3R	NT_033777.3	29153731	29157140	+	43449	Rpn2	Dmel_CG11888	NP_001263057.1	1029	regulatory particle non-ATPase 2, isoform B
3R	NT_033777.3	29158611	29164549	+	43450	CG11897	Dmel_CG11897	NP_651678.1	1374	uncharacterized protein Dmel_CG11897, isoform B
3R	NT_033777.3	29158611	29164549	+	43450	CG11897	Dmel_CG11897	NP_733278.1	1374	uncharacterized protein Dmel_CG11897, isoform A
3R	NT_033777.3	29165793	29171149	+	43451	CG11898	Dmel_CG11898	NP_651679.2	1320	uncharacterized protein Dmel_CG11898
3R	NT_033777.3	29173735	29181711	-	43453	CG14509	Dmel_CG14509	NP_001263059.1	472	uncharacterized protein Dmel_CG14509, isoform D
3R	NT_033777.3	29173735	29181711	-	43453	CG14509	Dmel_CG14509	NP_001097962.1	469	uncharacterized protein Dmel_CG14509, isoform B
3R	NT_033777.3	29175058	29181711	-	43453	CG14509	Dmel_CG14509	NP_001263060.1	506	uncharacterized protein Dmel_CG14509, isoform E
3R	NT_033777.3	29175058	29181711	-	43453	CG14509	Dmel_CG14509	NP_001097963.1	509	uncharacterized protein Dmel_CG14509, isoform C
3R	NT_033777.3	29197634	29199157	+	43454	CG14515	Dmel_CG14515	NP_651681.2	168	uncharacterized protein Dmel_CG14515
3R	NT_033777.3	29200521	29201756	+	46391	CG11899	Dmel_CG11899	NP_652046.1	364	uncharacterized protein Dmel_CG11899
3R	NT_033777.3	29201792	29202459	-	43456	Mesh1	Dmel_CG11900	NP_651682.1	179	metazoan SpoT homolog-1
3R	NT_033777.3	29202701	29203735	-	43457	Cyt-c1L	Dmel_CG14508	NP_651683.1	344	cytochrome c1-like
3R	NT_033777.3	29220297	29221776	+	44791	Ef1gamma	Dmel_CG11901	NP_652000.1	431	Ef1gamma, isoform A
3R	NT_033777.3	29220297	29221776	+	44791	Ef1gamma	Dmel_CG11901	NP_001189308.1	431	Ef1gamma, isoform C
3R	NT_033777.3	29220297	29221776	+	44791	Ef1gamma	Dmel_CG11901	NP_733280.1	431	Ef1gamma, isoform B
3R	NT_033777.3	29222401	29223339	-	43459	Cisd2	Dmel_CG1458	NP_651684.1	133	CDGSH iron sulfur domain 2
3R	NT_033777.3	29223570	29226188	+	43460	Brd8	Dmel_CG14514	NP_651685.2	872	bromodomain containing 8
3R	NT_033777.3	29226267	29227677	-	43461	CG14507	Dmel_CG14507	NP_001097964.1	373	uncharacterized protein Dmel_CG14507
3R	NT_033777.3	29230336	29233963	+	43462	Usp1	Dmel_CG15817	NP_651687.3	1078	ubiquitin specific protease 1, isoform D
3R	NT_033777.3	29230336	29233963	+	43462	Usp1	Dmel_CG15817	NP_001263061.1	1078	ubiquitin specific protease 1, isoform E
3R	NT_033777.3	29230336	29233963	+	43462	Usp1	Dmel_CG15817	NP_733282.1	1078	ubiquitin specific protease 1, isoform C
3R	NT_033777.3	29235364	29238128	-	43463	CG11951	Dmel_CG11951	NP_651688.1	814	uncharacterized protein Dmel_CG11951, isoform A
3R	NT_033777.3	29236522	29238128	-	43463	CG11951	Dmel_CG11951	NP_001247355.1	493	uncharacterized protein Dmel_CG11951, isoform B
3R	NT_033777.3	29240771	29243842	-	326140	CG31445	Dmel_CG31445	NP_651689.1	927	uncharacterized protein Dmel_CG31445, isoform A
3R	NT_033777.3	29240771	29243842	-	326140	CG31445	Dmel_CG31445	NP_001263064.1	927	uncharacterized protein Dmel_CG31445, isoform B
3R	NT_033777.3	29245090	29248406	-	53473	SP1029	Dmel_CG11956	NP_733285.1	932	SP1029, isoform C
3R	NT_033777.3	29245090	29248406	-	53473	SP1029	Dmel_CG11956	NP_001263065.1	932	SP1029, isoform D
3R	NT_033777.3	29245090	29248406	-	53473	SP1029	Dmel_CG11956	NP_733284.1	932	SP1029, isoform B
3R	NT_033777.3	29245090	29248406	-	53473	SP1029	Dmel_CG11956	NP_001287580.1	932	SP1029, isoform E
3R	NT_033777.3	29245090	29248406	-	53473	SP1029	Dmel_CG11956	NP_652618.1	932	SP1029, isoform A
3R	NT_033777.3	29252578	29254928	-	43466	stg	Dmel_CG1395	NP_524547.1	479	string, isoform A
3R	NT_033777.3	29252578	29254928	-	43466	stg	Dmel_CG1395	NP_001263066.1	479	string, isoform B
3R	NT_033777.3	29256664	29256897	+	19834823	CG45544	Dmel_CG45544	NP_001287582.1	77	uncharacterized protein Dmel_CG45544, isoform B
3R	NT_033777.3	29256664	29256897	+	19834823	CG45544	Dmel_CG45544	NP_001287581.1	77	uncharacterized protein Dmel_CG45544, isoform A
3R	NT_033777.3	29295819	29297094	-	43467	CG14506	Dmel_CG14506	NP_651690.2	397	uncharacterized protein Dmel_CG14506, isoform C
3R	NT_033777.3	29295819	29297094	-	43467	CG14506	Dmel_CG14506	NP_001263067.1	404	uncharacterized protein Dmel_CG14506, isoform B
3R	NT_033777.3	29315835	29319374	-	44643	Cnx99A	Dmel_CG11958	NP_477157.1	605	calnexin 99A, isoform B
3R	NT_033777.3	29315835	29319374	-	44643	Cnx99A	Dmel_CG11958	NP_001036767.1	605	calnexin 99A, isoform D
3R	NT_033777.3	29315835	29319374	-	44643	Cnx99A	Dmel_CG11958	NP_733286.1	605	calnexin 99A, isoform A
3R	NT_033777.3	29315835	29319374	-	44643	Cnx99A	Dmel_CG11958	NP_001036766.2	604	calnexin 99A, isoform E
3R	NT_033777.3	29369357	29369638	+	19835889	CG45546	Dmel_CG45546	NP_001287583.1	93	uncharacterized protein Dmel_CG45546
3R	NT_033777.3	29383277	29484489	+	43469	Ptp99A	Dmel_CG11516	NP_651691.4	1397	protein tyrosine phosphatase 99A, isoform F
3R	NT_033777.3	29462068	29484489	+	43469	Ptp99A	Dmel_CG11516	NP_996302.1	1241	protein tyrosine phosphatase 99A, isoform C
3R	NT_033777.3	29462068	29484489	+	43469	Ptp99A	Dmel_CG11516	NP_476816.1	1297	protein tyrosine phosphatase 99A, isoform B
3R	NT_033777.3	29462068	29484489	+	43469	Ptp99A	Dmel_CG11516	NP_733288.1	1226	protein tyrosine phosphatase 99A, isoform A
3R	NT_033777.3	29479698	29484489	+	43469	Ptp99A	Dmel_CG11516	NP_001189309.1	922	protein tyrosine phosphatase 99A, isoform G
3R	NT_033777.3	29487141	29489176	-	43471	CG2321	Dmel_CG2321	NP_651692.2	643	CG2321, isoform A
3R	NT_033777.3	29487141	29489176	-	43471	CG2321	Dmel_CG2321	NP_001263068.1	643	CG2321, isoform B
3R	NT_033777.3	29489545	29490528	+	43472	CG2006	Dmel_CG2006	NP_651693.2	327	CG2006, isoform A
3R	NT_033777.3	29489545	29490528	+	43472	CG2006	Dmel_CG2006	NP_001189310.1	327	CG2006, isoform B
3R	NT_033777.3	29490628	29491038	-	50096	Spase12	Dmel_CG11500	NP_788760.1	98	spase 12-subunit
3R	NT_033777.3	29491748	29492721	-	43473	CG2310	Dmel_CG2310	NP_733290.1	251	CG2310, isoform B
3R	NT_033777.3	29491748	29492721	-	43473	CG2310	Dmel_CG2310	NP_651694.1	251	CG2310, isoform A
3R	NT_033777.3	29493879	29494226	+	43474	Diedel	Dmel_CG11501	NP_651695.1	115	diedel
3R	NT_033777.3	29495718	29498698	+	43475	CG2010	Dmel_CG2010	NP_001263069.1	511	CG2010, isoform C
3R	NT_033777.3	29495718	29498698	+	43475	CG2010	Dmel_CG2010	NP_651696.1	511	CG2010, isoform B
3R	NT_033777.3	29496678	29498698	+	43475	CG2010	Dmel_CG2010	NP_733291.1	515	CG2010, isoform A
3R	NT_033777.3	29499642	29503125	-	43476	Trc8	Dmel_CG2304	NP_733293.1	804	TRC8 ring finger protein, isoform B
3R	NT_033777.3	29499642	29503125	-	43476	Trc8	Dmel_CG2304	NP_996303.1	809	TRC8 ring finger protein, isoform D
3R	NT_033777.3	29499642	29503125	-	43476	Trc8	Dmel_CG2304	NP_001263070.1	804	TRC8 ring finger protein, isoform E
3R	NT_033777.3	29499642	29503125	-	43476	Trc8	Dmel_CG2304	NP_733292.1	804	TRC8 ring finger protein, isoform A
3R	NT_033777.3	29515845	29516483	+	43477	ND-20L	Dmel_CG2014	NP_001287584.1	212	NADH dehydrogenase (ubiquinone) 20 kDa subunit-like, isoform B
3R	NT_033777.3	29515845	29516483	+	43477	ND-20L	Dmel_CG2014	NP_651698.1	212	NADH dehydrogenase (ubiquinone) 20 kDa subunit-like, isoform A
3R	NT_033777.3	29556636	29564490	+	45285	Dr	Dmel_CG1897	NP_477324.1	515	drop
3R	NT_033777.3	29587333	29588066	-	43479	CG7567	Dmel_CG7567	NP_651699.1	211	CG7567
3R	NT_033777.3	29589070	29589762	-	43480	CG11470	Dmel_CG11470	NP_001287585.1	230	uncharacterized protein Dmel_CG11470, isoform B
3R	NT_033777.3	29589070	29589762	-	43480	CG11470	Dmel_CG11470	NP_651700.2	230	uncharacterized protein Dmel_CG11470, isoform A
3R	NT_033777.3	29590149	29590882	-	318567	CG31041	Dmel_CG31041	NP_733294.2	198	uncharacterized protein Dmel_CG31041
3R	NT_033777.3	29593351	29598178	+	43481	alph	Dmel_CG1906	NP_733295.1	368	alphabet, isoform A
3R	NT_033777.3	29593351	29597799	+	43481	alph	Dmel_CG1906	NP_733298.1	371	alphabet, isoform B
3R	NT_033777.3	29593351	29596555	+	43481	alph	Dmel_CG1906	NP_001247356.1	332	alphabet, isoform F
3R	NT_033777.3	29593351	29598178	+	43481	alph	Dmel_CG1906	NP_733297.1	368	alphabet, isoform D
3R	NT_033777.3	29593351	29598178	+	43481	alph	Dmel_CG1906	NP_733296.1	368	alphabet, isoform C
3R	NT_033777.3	29593351	29604542	+	43481	alph	Dmel_CG1906	NP_651701.1	374	alphabet, isoform E
3R	NT_033777.3	29599252	29600862	-	43482	CG7568	Dmel_CG7568	NP_001263071.1	482	CG7568, isoform E
3R	NT_033777.3	29599297	29600862	-	43482	CG7568	Dmel_CG7568	NP_001097972.3	467	CG7568, isoform D
3R	NT_033777.3	29608477	29608854	+	12798297	Diedel2	Dmel_CG43228	NP_001247357.1	125	diedel 2
3R	NT_033777.3	29619531	29620555	+	43483	CG1907	Dmel_CG1907	NP_651703.1	317	CG1907
3R	NT_033777.3	29631967	29642073	-	43484	Dop1R2	Dmel_CG18741	NP_001263072.1	807	dopamine 1-like receptor 2, isoform C
3R	NT_033777.3	29632777	29642073	-	43484	Dop1R2	Dmel_CG18741	NP_733299.1	537	dopamine 1-like receptor 2, isoform A
3R	NT_033777.3	29639016	29642073	-	43484	Dop1R2	Dmel_CG18741	NP_524548.1	539	dopamine 1-like receptor 2, isoform B
3R	NT_033777.3	29664779	29666783	+	43485	ppk21	Dmel_CG12048	NP_651704.2	550	pickpocket 21, isoform A
3R	NT_033777.3	29664779	29666783	+	43485	ppk21	Dmel_CG12048	NP_001263073.1	548	pickpocket 21, isoform B
3R	NT_033777.3	29666814	29668877	-	43486	ppk20	Dmel_CG7577	NP_001263075.1	565	pickpocket 20, isoform C
3R	NT_033777.3	29666814	29668877	-	43486	ppk20	Dmel_CG7577	NP_651705.2	587	pickpocket 20, isoform A
3R	NT_033777.3	29666814	29668877	-	43486	ppk20	Dmel_CG7577	NP_001263074.1	564	pickpocket 20, isoform B
3R	NT_033777.3	29669158	29670872	+	43487	ppk30	Dmel_CG18110	NP_001263076.1	457	pickpocket 30, isoform B
3R	NT_033777.3	29669158	29670872	+	43487	ppk30	Dmel_CG18110	NP_651706.1	457	pickpocket 30, isoform A
3R	NT_033777.3	29671716	29672212	+	43488	Obp99a	Dmel_CG18111	NP_651707.1	142	Odorant-binding protein 99a, isoform A
3R	NT_033777.3	29671716	29672212	+	43488	Obp99a	Dmel_CG18111	NP_001287586.1	142	Odorant-binding protein 99a, isoform B
3R	NT_033777.3	29672456	29674223	+	43489	ppk19	Dmel_CG18287	NP_651708.2	511	pickpocket 19
3R	NT_033777.3	29674275	29675308	-	43490	Bub3	Dmel_CG7581	NP_001287587.1	326	Bub3, isoform B
3R	NT_033777.3	29674275	29675308	-	43490	Bub3	Dmel_CG7581	NP_477381.1	326	Bub3, isoform A
3R	NT_033777.3	29675730	29680178	+	43491	Cap-D2	Dmel_CG1911	NP_651709.1	1380	CAP-D2 condensin subunit
3R	NT_033777.3	29680491	29681866	-	43492	CG7582	Dmel_CG7582	NP_651710.1	254	CG7582, isoform A
3R	NT_033777.3	29680491	29680976	-	43492	CG7582	Dmel_CG7582	NP_001247358.1	142	CG7582, isoform B
3R	NT_033777.3	29683402	29685614	+	43493	Gycalpha99B	Dmel_CG1912	NP_477088.2	676	guanylyl cyclase alpha-subunit at 99B
3R	NT_033777.3	29685799	29685984	-	43494	Obp99c	Dmel_CG7584	NP_001263077.1	61	Odorant-binding protein 99c, isoform B
3R	NT_033777.3	29685799	29686723	-	43494	Obp99c	Dmel_CG7584	NP_651711.1	151	Odorant-binding protein 99c, isoform A
3R	NT_033777.3	29692807	29696424	+	43495	dmrt99B	Dmel_CG15504	NP_524549.1	510	doublesex-Mab related 99B
3R	NT_033777.3	29714539	29714952	+	43496	Obp99d	Dmel_CG15505	NP_651712.1	137	Odorant-binding protein 99d
3R	NT_033777.3	29715132	29715349	-	2768691	Dup99B	Dmel_CG33495	NP_996305.1	54	ductus ejaculatorius peptide 99B, isoform A
3R	NT_033777.3	29715236	29715349	-	2768691	Dup99B	Dmel_CG33495	NP_001247359.1	37	ductus ejaculatorius peptide 99B, isoform B
3R	NT_033777.3	29716338	29716787	-	43497	Obp99b	Dmel_CG7592	NP_001263078.1	149	Odorant-binding protein 99b, isoform B
3R	NT_033777.3	29716338	29716787	-	43497	Obp99b	Dmel_CG7592	NP_651713.1	149	Odorant-binding protein 99b, isoform A
3R	NT_033777.3	29719097	29722245	+	43498	CG15506	Dmel_CG15506	NP_651714.1	297	uncharacterized protein Dmel_CG15506
3R	NT_033777.3	29722559	29722890	+	5740662	CG34296	Dmel_CG34296	NP_001097973.1	91	uncharacterized protein Dmel_CG34296
3R	NT_033777.3	29723229	29724146	+	43499	Pcd	Dmel_CG1963	NP_477360.2	192	pterin-4a-carbinolamine dehydratase
3R	NT_033777.3	29724202	29724866	-	43500	CG7593	Dmel_CG7593	NP_651715.1	202	CG7593
3R	NT_033777.3	29725255	29725614	+	59246	CG18731	Dmel_CG18731	NP_001287588.1	119	uncharacterized protein Dmel_CG18731, isoform B
3R	NT_033777.3	29725255	29725614	+	59246	CG18731	Dmel_CG18731	NP_652716.1	119	uncharacterized protein Dmel_CG18731, isoform A
3R	NT_033777.3	29727028	29732666	+	43501	Kul	Dmel_CG1964	NP_651716.1	1537	Kuzbanian-like, isoform A
3R	NT_033777.3	29727028	29730937	+	43501	Kul	Dmel_CG1964	NP_001287590.1	985	Kuzbanian-like, isoform C
3R	NT_033777.3	29727028	29732666	+	43501	Kul	Dmel_CG1964	NP_001287589.1	1537	Kuzbanian-like, isoform B
3R	NT_033777.3	29735444	29736651	-	43502	CG7601	Dmel_CG7601	NP_651717.1	326	CG7601
3R	NT_033777.3	29737044	29737992	+	43503	CIA30	Dmel_CG7598	NP_651718.1	296	complex I intermediate-associated protein, 30 kDa
3R	NT_033777.3	29739977	29741393	+	43504	CG1969	Dmel_CG1969	NP_733301.1	215	CG1969, isoform B
3R	NT_033777.3	29739977	29741432	+	43504	CG1969	Dmel_CG1969	NP_001263081.1	228	CG1969, isoform F
3R	NT_033777.3	29739977	29741809	+	43504	CG1969	Dmel_CG1969	NP_001247360.1	221	CG1969, isoform E
3R	NT_033777.3	29739977	29741393	+	43504	CG1969	Dmel_CG1969	NP_001263079.1	215	CG1969, isoform G
3R	NT_033777.3	29740405	29741393	+	43504	CG1969	Dmel_CG1969	NP_651719.1	219	CG1969, isoform A
3R	NT_033777.3	29740405	29741739	+	43504	CG1969	Dmel_CG1969	NP_001247361.1	225	CG1969, isoform D
3R	NT_033777.3	29740405	29741393	+	43504	CG1969	Dmel_CG1969	NP_001263080.1	215	CG1969, isoform H
3R	NT_033777.3	29742247	29744999	-	43505	Wdr24	Dmel_CG7609	NP_733303.2	777	WD repeat domain 24, isoform C
3R	NT_033777.3	29742247	29744999	-	43505	Wdr24	Dmel_CG7609	NP_651720.3	776	WD repeat domain 24, isoform B
3R	NT_033777.3	29745470	29747397	+	43506	IntS11	Dmel_CG1972	NP_651721.1	597	integrator 11
3R	NT_033777.3	29747854	29748747	-	43507	ATPsyngamma	Dmel_CG7610	NP_524550.1	297	ATP synthase, gamma subunit, isoform A
3R	NT_033777.3	29747854	29748747	-	43507	ATPsyngamma	Dmel_CG7610	NP_733305.1	297	ATP synthase, gamma subunit, isoform C
3R	NT_033777.3	29747854	29748747	-	43507	ATPsyngamma	Dmel_CG7610	NP_733304.1	297	ATP synthase, gamma subunit, isoform B
3R	NT_033777.3	29749791	29752957	+	43508	yata	Dmel_CG1973	NP_651722.1	873	yata, isoform A
3R	NT_033777.3	29749791	29752957	+	43508	yata	Dmel_CG1973	NP_001263082.1	873	yata, isoform B
3R	NT_033777.3	29766985	29793024	+	3772082	kay	Dmel_CG33956	NP_001027580.1	722	kayak, isoform D
3R	NT_033777.3	29773600	29793024	+	3772082	kay	Dmel_CG33956	NP_001027579.1	595	kayak, isoform A
3R	NT_033777.3	29773600	29793024	+	3772082	kay	Dmel_CG33956	NP_001287591.1	646	kayak, isoform G
3R	NT_033777.3	29779412	29780356	-	43511	fig	Dmel_CG7615	NP_651724.1	314	fos intronic gene
3R	NT_033777.3	29783073	29793024	+	3772082	kay	Dmel_CG33956	NP_001027578.1	546	kayak, isoform B
3R	NT_033777.3	29790153	29793024	+	3772082	kay	Dmel_CG33956	NP_001027577.2	755	kayak, isoform F
3R	NT_033777.3	29794636	29795698	+	43512	sro	Dmel_CG12068	NP_651725.1	335	shroud
3R	NT_033777.3	29795842	29799269	-	43513	CG7837	Dmel_CG7837	NP_651726.1	975	CG7837
3R	NT_033777.3	29799898	29800917	+	43514	Drice	Dmel_CG7788	NP_524551.2	339	death related ICE-like caspase
3R	NT_033777.3	29801949	29802840	-	43515	CG7834	Dmel_CG7834	NP_651727.1	253	CG7834, isoform A
3R	NT_033777.3	29801949	29802840	-	43515	CG7834	Dmel_CG7834	NP_733307.1	253	CG7834, isoform B
3R	NT_033777.3	29803302	29804286	+	43516	CG7789	Dmel_CG7789	NP_651728.1	306	CG7789
3R	NT_033777.3	29804406	29806626	-	43517	ncd	Dmel_CG7831	NP_476651.1	700	non-claret disjunctional, isoform A
3R	NT_033777.3	29804406	29806626	-	43517	ncd	Dmel_CG7831	NP_001287592.1	700	non-claret disjunctional, isoform B
3R	NT_033777.3	29807335	29814431	+	43518	ca	Dmel_CG31037	NP_001287593.1	1961	claret, isoform C
3R	NT_033777.3	29807335	29814431	+	43518	ca	Dmel_CG31037	NP_733309.3	1961	claret, isoform A
3R	NT_033777.3	29815063	29816406	-	43521	Vps16B	Dmel_CG18112	NP_651731.1	447	vacuolar protein sorting 16B
3R	NT_033777.3	29816916	29817728	-	43522	CG7829	Dmel_CG7829	NP_651732.1	253	CG7829
3R	NT_033777.3	29822381	29825230	+	43523	neo	Dmel_CG7802	NP_651733.1	744	neyo, isoform A
3R	NT_033777.3	29822381	29825230	+	43523	neo	Dmel_CG7802	NP_996306.1	744	neyo, isoform B
3R	NT_033777.3	29827560	29833251	-	326115	Atg16	Dmel_CG31033	NP_733311.2	419	Autophagy-related 16, isoform A
3R	NT_033777.3	29827560	29834845	-	326115	Atg16	Dmel_CG31033	NP_733313.2	604	Autophagy-related 16, isoform C
3R	NT_033777.3	29827560	29834845	-	326115	Atg16	Dmel_CG31033	NP_001138124.2	612	Autophagy-related 16, isoform F
3R	NT_033777.3	29827560	29833329	-	326115	Atg16	Dmel_CG31033	NP_733312.2	445	Autophagy-related 16, isoform B
3R	NT_033777.3	29835811	29836239	-	8673955	CG42592	Dmel_CG42592	NP_001163770.1	142	uncharacterized protein Dmel_CG42592
3R	NT_033777.3	29836626	29837342	+	43526	Prtl99C	Dmel_CG15510	NP_001163771.1	193	Protamine-like 99C, isoform C
3R	NT_033777.3	29836626	29837342	+	43526	Prtl99C	Dmel_CG15510	NP_651735.3	201	Protamine-like 99C, isoform B
3R	NT_033777.3	29836626	29837342	+	43526	Prtl99C	Dmel_CG15510	NP_001287594.1	201	Protamine-like 99C, isoform D
3R	NT_033777.3	29845604	29854308	+	43528	Cad99C	Dmel_CG31009	NP_733314.1	1706	cadherin 99C, isoform A
3R	NT_033777.3	29845604	29854308	+	43528	Cad99C	Dmel_CG31009	NP_001189311.1	1706	cadherin 99C, isoform B
3R	NT_033777.3	29854858	29857397	-	43529	dgt1	Dmel_CG18041	NP_651737.1	484	dim gamma-tubulin 1, isoform A
3R	NT_033777.3	29855148	29857397	-	43529	dgt1	Dmel_CG18041	NP_001287595.1	589	dim gamma-tubulin 1, isoform C
3R	NT_033777.3	29855944	29857397	-	43529	dgt1	Dmel_CG18041	NP_001263083.1	425	dim gamma-tubulin 1, isoform B
3R	NT_033777.3	29857757	29858871	-	43530	CG7824	Dmel_CG7824	NP_651738.1	352	CG7824, isoform A
3R	NT_033777.3	29857757	29858783	-	43530	CG7824	Dmel_CG7824	NP_001189312.1	300	CG7824, isoform C
3R	NT_033777.3	29860354	29861354	-	43531	CG15514	Dmel_CG15514	NP_001263084.1	302	uncharacterized protein Dmel_CG15514, isoform B
3R	NT_033777.3	29860354	29861354	-	43531	CG15514	Dmel_CG15514	NP_651739.1	309	uncharacterized protein Dmel_CG15514, isoform A
3R	NT_033777.3	29861931	29863518	+	43532	RpS8	Dmel_CG7808	NP_001287596.1	208	ribosomal protein S8, isoform F
3R	NT_033777.3	29861931	29863518	+	43532	RpS8	Dmel_CG7808	NP_001287597.1	208	ribosomal protein S8, isoform G
3R	NT_033777.3	29861931	29863518	+	43532	RpS8	Dmel_CG7808	NP_001247362.1	208	ribosomal protein S8, isoform E
3R	NT_033777.3	29861931	29863518	+	43532	RpS8	Dmel_CG7808	NP_651740.1	208	ribosomal protein S8, isoform C
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_001189314.1	355	Zinc/iron regulated transporter-related protein 99C, isoform I
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733322.1	355	Zinc/iron regulated transporter-related protein 99C, isoform E
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733321.1	355	Zinc/iron regulated transporter-related protein 99C, isoform D
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_001189315.1	355	Zinc/iron regulated transporter-related protein 99C, isoform J
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733320.1	355	Zinc/iron regulated transporter-related protein 99C, isoform C
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733319.1	355	Zinc/iron regulated transporter-related protein 99C, isoform A
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_001189313.1	355	Zinc/iron regulated transporter-related protein 99C, isoform H
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733324.1	355	Zinc/iron regulated transporter-related protein 99C, isoform G
3R	NT_033777.3	29863958	29865267	-	43533	Zip99C	Dmel_CG7816	NP_733323.1	355	Zinc/iron regulated transporter-related protein 99C, isoform F
3R	NT_033777.3	29869708	29874566	+	318566	CG34133	Dmel_CG34133	NP_001036772.2	1108	uncharacterized protein Dmel_CG34133, isoform C
3R	NT_033777.3	29869708	29874566	+	318566	CG34133	Dmel_CG34133	NP_001036773.1	1078	uncharacterized protein Dmel_CG34133, isoform B
3R	NT_033777.3	29869708	29874566	+	318566	CG34133	Dmel_CG34133	NP_651742.2	1090	uncharacterized protein Dmel_CG34133, isoform E
3R	NT_033777.3	29878372	29897678	+	43535	CG31038	Dmel_CG31038	NP_733327.1	605	uncharacterized protein Dmel_CG31038, isoform B
3R	NT_033777.3	29878372	29897678	+	43535	CG31038	Dmel_CG31038	NP_733328.1	605	uncharacterized protein Dmel_CG31038, isoform D
3R	NT_033777.3	29878372	29902591	+	43535	CG31038	Dmel_CG31038	NP_996308.1	730	uncharacterized protein Dmel_CG31038, isoform E
3R	NT_033777.3	29878372	29902591	+	43535	CG31038	Dmel_CG31038	NP_733326.1	730	uncharacterized protein Dmel_CG31038, isoform A
3R	NT_033777.3	29895054	29902591	+	43535	CG31038	Dmel_CG31038	NP_996309.1	441	uncharacterized protein Dmel_CG31038, isoform C
3R	NT_033777.3	29895054	29902591	+	43535	CG31038	Dmel_CG31038	NP_001263087.1	433	uncharacterized protein Dmel_CG31038, isoform H
3R	NT_033777.3	29896745	29902591	+	43535	CG31038	Dmel_CG31038	NP_001263086.1	412	uncharacterized protein Dmel_CG31038, isoform G
3R	NT_033777.3	29903264	29903801	-	43537	CG15517	Dmel_CG15517	NP_651745.1	158	uncharacterized protein Dmel_CG15517
3R	NT_033777.3	29905498	29906382	+	43538	CG15515	Dmel_CG15515	NP_001263088.1	123	uncharacterized protein Dmel_CG15515
3R	NT_033777.3	29908294	29912781	+	43539	CG31036	Dmel_CG31036	NP_001138125.2	1006	uncharacterized protein Dmel_CG31036, isoform D
3R	NT_033777.3	29908294	29912781	+	43539	CG31036	Dmel_CG31036	NP_733329.1	1007	uncharacterized protein Dmel_CG31036, isoform A
3R	NT_033777.3	29913141	29914257	-	43541	Capa	Dmel_CG15520	NP_524552.1	151	capability
3R	NT_033777.3	29914596	29920063	-	43542	trp	Dmel_CG7875	NP_476768.1	1275	transient receptor potential, isoform A
3R	NT_033777.3	29918817	29920063	-	43542	trp	Dmel_CG7875	NP_001263090.1	246	transient receptor potential, isoform B
3R	NT_033777.3	29922242	29923039	+	43543	Jon99Ciii	Dmel_CG31362	NP_733330.1	265	jonah 99Ciii, isoform A
3R	NT_033777.3	29922242	29923039	+	43543	Jon99Ciii	Dmel_CG31362	NP_001287598.1	265	jonah 99Ciii, isoform B
3R	NT_033777.3	29923790	29924587	-	43544	Jon99Cii	Dmel_CG31034	NP_524554.1	265	jonah 99Cii
3R	NT_033777.3	29925299	29926174	-	43545	Jon99Ci	Dmel_CG31039	NP_524555.1	272	jonah 99Ci
3R	NT_033777.3	29927995	29928575	+	43546	CG15522	Dmel_CG15522	NP_651749.1	173	uncharacterized protein Dmel_CG15522, isoform A
3R	NT_033777.3	29927995	29928575	+	43546	CG15522	Dmel_CG15522	NP_001263091.1	173	uncharacterized protein Dmel_CG15522, isoform B
3R	NT_033777.3	29928803	29930383	-	318624	alpha-Man-Ic	Dmel_CG31202	NP_733331.1	526	alpha-Mannosidase class I c
3R	NT_033777.3	29930633	29933028	-	43547	Cog7	Dmel_CG31040	NP_651750.1	742	Cog7
3R	NT_033777.3	29933387	29933905	+	43548	CG42557	Dmel_CG42557	NP_651751.1	153	uncharacterized protein Dmel_CG42557
3R	NT_033777.3	29933943	29934460	+	43548	CG42557	Dmel_CG42557	NP_001036774.2	122	uncharacterized protein Dmel_CG42558
3R	NT_033777.3	29934605	29935827	-	43549	eIF2B-alpha	Dmel_CG7883	NP_651752.1	306	eIF2B-alpha
3R	NT_033777.3	29936174	29948130	+	43550	Vps13B	Dmel_CG15523	NP_651753.2	3731	vacuolar protein sorting 13B, isoform A
3R	NT_033777.3	29936174	29937869	+	43550	Vps13B	Dmel_CG15523	NP_996310.2	529	vacuolar protein sorting 13B, isoform B
3R	NT_033777.3	29951368	29961882	-	43551	TkR99D	Dmel_CG7887	NP_001263092.1	564	Tachykinin-like receptor at 99D, isoform C
3R	NT_033777.3	29951503	29961882	-	43551	TkR99D	Dmel_CG7887	NP_001163772.1	517	Tachykinin-like receptor at 99D, isoform B
3R	NT_033777.3	29951503	29961882	-	43551	TkR99D	Dmel_CG7887	NP_524556.2	519	Tachykinin-like receptor at 99D, isoform A
3R	NT_033777.3	29985598	29990538	+	43552	CG7896	Dmel_CG7896	NP_651754.1	1392	CG7896
3R	NT_033777.3	29991584	29993144	-	48445	Acph-1	Dmel_CG7899	NP_524917.1	438	acid phosphatase 1, isoform A
3R	NT_033777.3	29991584	29993195	-	48445	Acph-1	Dmel_CG7899	NP_733332.1	455	acid phosphatase 1, isoform B
3R	NT_033777.3	29993762	29995158	-	43554	CG7903	Dmel_CG7903	NP_651755.2	384	CG7903, isoform A
3R	NT_033777.3	29993762	29995158	-	43554	CG7903	Dmel_CG7903	NP_001263093.1	382	CG7903, isoform B
3R	NT_033777.3	29995367	29996956	+	43555	Sas-6	Dmel_CG15524	NP_651756.1	472	spindle assembly abnormal 6
3R	NT_033777.3	29997027	29997574	-	43556	CG15525	Dmel_CG15525	NP_651757.1	161	uncharacterized protein Dmel_CG15525
3R	NT_033777.3	29998347	29999579	+	43557	CG11504	Dmel_CG11504	NP_733333.1	410	uncharacterized protein Dmel_CG11504, isoform A
3R	NT_033777.3	29998347	29999579	+	43557	CG11504	Dmel_CG11504	NP_651758.1	410	uncharacterized protein Dmel_CG11504, isoform B
3R	NT_033777.3	29998347	29999579	+	43557	CG11504	Dmel_CG11504	NP_788761.1	410	uncharacterized protein Dmel_CG11504, isoform C
3R	NT_033777.3	29999842	30000322	+	5740436	CG34298	Dmel_CG34298	NP_001097976.1	139	uncharacterized protein Dmel_CG34298
3R	NT_033777.3	30000583	30003522	+	43558	Tace	Dmel_CG7908	NP_733334.1	732	tace, isoform A
3R	NT_033777.3	30000583	30001494	+	43558	Tace	Dmel_CG7908	NP_651759.4	262	tace, isoform B
3R	NT_033777.3	30003770	30004603	-	43559	Nph	Dmel_CG7911	NP_001097975.1	156	nucleophosmin, isoform B
3R	NT_033777.3	30003770	30004603	-	43559	Nph	Dmel_CG7911	NP_651760.1	156	nucleophosmin, isoform A
3R	NT_033777.3	30005034	30009980	+	43560	Nlp	Dmel_CG7917	NP_001263094.1	152	nucleoplasmin, isoform B
3R	NT_033777.3	30005034	30009980	+	43560	Nlp	Dmel_CG7917	NP_524557.1	152	nucleoplasmin, isoform A
3R	NT_033777.3	30006057	30009029	-	43561	CG7912	Dmel_CG7912	NP_651761.2	602	CG7912
3R	NT_033777.3	30010663	30014995	-	43562	CG7920	Dmel_CG7920	NP_651762.1	477	CG7920, isoform A
3R	NT_033777.3	30010663	30014995	-	43562	CG7920	Dmel_CG7920	NP_001263095.1	477	CG7920, isoform C
3R	NT_033777.3	30016372	30019610	-	43563	Mgat2	Dmel_CG7921	NP_651763.4	608	Mgat2, isoform A
3R	NT_033777.3	30016372	30019610	-	43563	Mgat2	Dmel_CG7921	NP_001263096.1	509	Mgat2, isoform C
3R	NT_033777.3	30016372	30019610	-	43563	Mgat2	Dmel_CG7921	NP_001014684.1	488	Mgat2, isoform B
3R	NT_033777.3	30022404	30022598	-	43564	RpS28a	Dmel_CG15527	NP_651764.1	64	ribosomal protein S28a
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_733336.1	745	axin, isoform A
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_001263098.1	739	axin, isoform G
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_001138126.1	699	axin, isoform D
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_001263097.1	693	axin, isoform F
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_733338.1	739	axin, isoform C
3R	NT_033777.3	30030951	30031348	+	43565	Axn	Dmel_CG7926	NP_001163773.1	110	axin, isoform E
3R	NT_033777.3	30030951	30034314	+	43565	Axn	Dmel_CG7926	NP_733337.1	745	axin, isoform B
3R	NT_033777.3	30035428	30036801	-	43566	ZIPIC	Dmel_CG7928	NP_651765.1	457	Zinc-finger protein interacting with CP190
3R	NT_033777.3	30037090	30037645	-	43567	ocn	Dmel_CG7929	NP_524578.1	148	ocnus
3R	NT_033777.3	30038040	30038638	-	43568	janB	Dmel_CG7931	NP_476584.2	140	janus B
3R	NT_033777.3	30038863	30039434	-	43569	janA	Dmel_CG7933	NP_788762.1	135	janus A, isoform B
3R	NT_033777.3	30038863	30039386	-	43569	janA	Dmel_CG7933	NP_996311.1	119	janus A, isoform C
3R	NT_033777.3	30038863	30039386	-	43569	janA	Dmel_CG7933	NP_788763.1	119	janus A, isoform A
3R	NT_033777.3	30039813	30040936	+	43571	Sry-alpha	Dmel_CG17957	NP_524579.1	356	serendipity beta, isoform A
3R	NT_033777.3	30039813	30040936	+	43571	Sry-alpha	Dmel_CG17957	NP_001303451.1	356	serendipity beta, isoform B
3R	NT_033777.3	30041262	30042854	+	43571	Sry-alpha	Dmel_CG17957	NP_001303490.1	530	serendipity alpha, isoform B
3R	NT_033777.3	30041262	30042854	+	43571	Sry-alpha	Dmel_CG17957	NP_524580.1	530	serendipity alpha, isoform A
3R	NT_033777.3	30043479	30044780	+	43572	Sry-delta	Dmel_CG17958	NP_524581.1	433	serendipity delta
3R	NT_033777.3	30045313	30045779	-	43573	RpL32	Dmel_CG7939	NP_733340.1	134	ribosomal protein L32, isoform B
3R	NT_033777.3	30045313	30045779	-	43573	RpL32	Dmel_CG7939	NP_001138127.1	134	ribosomal protein L32, isoform D
3R	NT_033777.3	30045313	30045921	-	43573	RpL32	Dmel_CG7939	NP_733339.1	147	ribosomal protein L32, isoform C
3R	NT_033777.3	30045313	30045779	-	43573	RpL32	Dmel_CG7939	NP_524582.1	134	ribosomal protein L32, isoform A
3R	NT_033777.3	30047090	30048218	+	43574	CG7943	Dmel_CG7943	NP_651766.1	332	CG7943, isoform A
3R	NT_033777.3	30047090	30048218	+	43574	CG7943	Dmel_CG7943	NP_733341.1	332	CG7943, isoform B
3R	NT_033777.3	30048809	30051938	-	43575	CG15528	Dmel_CG15528	NP_651767.2	227	uncharacterized protein Dmel_CG15528
3R	NT_033777.3	30052799	30054305	+	43576	CG7946	Dmel_CG7946	NP_001263099.1	475	CG7946, isoform B
3R	NT_033777.3	30052799	30054305	+	43576	CG7946	Dmel_CG7946	NP_651768.1	475	CG7946, isoform A
3R	NT_033777.3	30054866	30055705	-	43577	spn-A	Dmel_CG7948	NP_733342.1	279	spindle A, isoform B
3R	NT_033777.3	30054866	30055939	-	43577	spn-A	Dmel_CG7948	NP_524583.1	336	spindle A, isoform A
3R	NT_033777.3	30056136	30056555	+	43578	CG15526	Dmel_CG15526	NP_651769.1	112	uncharacterized protein Dmel_CG15526
3R	NT_033777.3	30057003	30057443	+	5740224	CG34317	Dmel_CG34317	NP_001097977.1	111	uncharacterized protein Dmel_CG34317
3R	NT_033777.3	30057459	30057935	+	5740224	CG34317	Dmel_CG34317	NP_733343.1	158	CG7950, isoform B
3R	NT_033777.3	30057459	30057935	+	5740224	CG34317	Dmel_CG34317	NP_651770.1	158	CG7950, isoform A
3R	NT_033777.3	30058925	30120150	+	43580	sima	Dmel_CG45051	NP_001138129.1	426	similar, isoform B
3R	NT_033777.3	30058925	30120758	+	43580	sima	Dmel_CG45051	NP_524584.2	1507	similar, isoform A
3R	NT_033777.3	30063078	30120758	+	43580	sima	Dmel_CG45051	NP_001287599.1	1593	similar, isoform D
3R	NT_033777.3	30104758	30120758	+	43580	sima	Dmel_CG45051	NP_001263100.1	869	similar, isoform C
3R	NT_033777.3	30122054	30123078	-	19835597	CG45072	Dmel_CG45072	NP_001287600.1	301	uncharacterized protein Dmel_CG45072
3R	NT_033777.3	30123801	30124735	-	19836197	CG45073	Dmel_CG45073	NP_001287601.1	271	uncharacterized protein Dmel_CG45073
3R	NT_033777.3	30125765	30128044	-	43581	Ppi1	Dmel_CG31025	NP_733346.1	742	protein phosphatase 1c interacting protein 1, isoform B
3R	NT_033777.3	30125765	30128938	-	43581	Ppi1	Dmel_CG31025	NP_733345.2	998	protein phosphatase 1c interacting protein 1, isoform A
3R	NT_033777.3	30129381	30132213	-	318562	CG31029	Dmel_CG31029	NP_733347.1	905	uncharacterized protein Dmel_CG31029
3R	NT_033777.3	30133242	30134533	-	43582	Tpi	Dmel_CG2171	NP_788764.1	348	triose phosphate isomerase, isoform A
3R	NT_033777.3	30133242	30134046	-	43582	Tpi	Dmel_CG2171	NP_788765.1	247	triose phosphate isomerase, isoform B
3R	NT_033777.3	30133242	30134046	-	43582	Tpi	Dmel_CG2171	NP_788766.1	247	triose phosphate isomerase, isoform C
3R	NT_033777.3	30135275	30138525	-	43583	AdoR	Dmel_CG9753	NP_001263101.1	772	adenosine receptor, isoform B
3R	NT_033777.3	30135275	30138525	-	43583	AdoR	Dmel_CG9753	NP_651772.1	774	adenosine receptor, isoform A
3R	NT_033777.3	30152181	30153019	+	43584	CG15529	Dmel_CG15529	NP_651773.1	196	uncharacterized protein Dmel_CG15529, isoform A
3R	NT_033777.3	30152181	30153019	+	43584	CG15529	Dmel_CG15529	NP_001303487.1	196	uncharacterized protein Dmel_CG15529, isoform B
3R	NT_033777.3	30153089	30156437	-	43585	CG11498	Dmel_CG11498	NP_001334706.1	571	uncharacterized protein Dmel_CG11498, isoform D
3R	NT_033777.3	30153089	30156159	-	43585	CG11498	Dmel_CG11498	NP_651774.2	531	uncharacterized protein Dmel_CG11498, isoform B
3R	NT_033777.3	30164978	30166361	-	318563	CG31030	Dmel_CG31030	NP_001036775.1	423	uncharacterized protein Dmel_CG31030, isoform B
3R	NT_033777.3	30165150	30166361	-	318563	CG31030	Dmel_CG31030	NP_733350.1	384	uncharacterized protein Dmel_CG31030, isoform A
3R	NT_033777.3	30166801	30171067	-	43586	CG31028	Dmel_CG31028	NP_733352.3	1154	uncharacterized protein Dmel_CG31028
3R	NT_033777.3	30172990	30174486	-	43587	Mlc2	Dmel_CG2184	NP_524586.1	222	myosin light chain 2
3R	NT_033777.3	30176517	30177546	-	43588	CG1983	Dmel_CG1983	NP_001287602.1	254	CG1983, isoform B
3R	NT_033777.3	30176517	30177546	-	43588	CG1983	Dmel_CG1983	NP_651776.2	254	CG1983, isoform A
3R	NT_033777.3	30177977	30179645	+	43589	CG15530	Dmel_CG15530	NP_651777.1	494	uncharacterized protein Dmel_CG15530, isoform A
3R	NT_033777.3	30177977	30179645	+	43589	CG15530	Dmel_CG15530	NP_001287603.1	494	uncharacterized protein Dmel_CG15530, isoform C
3R	NT_033777.3	30177977	30179645	+	43589	CG15530	Dmel_CG15530	NP_733354.1	494	uncharacterized protein Dmel_CG15530, isoform B
3R	NT_033777.3	30180356	30180997	+	43590	Bet5	Dmel_CG1359	NP_651778.1	145	blocked early in transport 5
3R	NT_033777.3	30185844	30190741	-	43591	CG9747	Dmel_CG9747	NP_001287604.1	461	CG9747, isoform B
3R	NT_033777.3	30185844	30190741	-	43591	CG9747	Dmel_CG9747	NP_651779.1	461	CG9747, isoform A
3R	NT_033777.3	30194883	30196168	-	43592	CG15531	Dmel_CG15531	NP_651780.1	334	uncharacterized protein Dmel_CG15531
3R	NT_033777.3	30196637	30198893	-	43593	CG9743	Dmel_CG9743	NP_651781.1	420	CG9743
3R	NT_033777.3	30206638	30208657	-	43594	RpS7	Dmel_CG1883	NP_651782.1	194	ribosomal protein S7, isoform A
3R	NT_033777.3	30206638	30208657	-	43594	RpS7	Dmel_CG1883	NP_733356.2	194	ribosomal protein S7, isoform E
3R	NT_033777.3	30206638	30208657	-	43594	RpS7	Dmel_CG1883	NP_733355.1	194	ribosomal protein S7, isoform C
3R	NT_033777.3	30206638	30208657	-	43594	RpS7	Dmel_CG1883	NP_996312.1	194	ribosomal protein S7, isoform D
3R	NT_033777.3	30209985	30210220	+	43595	Anp	Dmel_CG1361	NP_001287605.1	57	andropin, isoform B
3R	NT_033777.3	30209985	30210220	+	43595	Anp	Dmel_CG1361	NP_524587.1	57	andropin, isoform A
3R	NT_033777.3	30210948	30211200	+	43596	CecA1	Dmel_CG1365	NP_524588.1	63	cecropin A1
3R	NT_033777.3	30212238	30212487	+	43597	CecA2	Dmel_CG1367	NP_524589.1	63	cecropin A2
3R	NT_033777.3	30213476	30213725	-	43598	CecB	Dmel_CG1878	NP_524590.1	63	cecropin B
3R	NT_033777.3	30216577	30216837	+	43599	CecC	Dmel_CG1373	NP_524591.1	63	cecropin C
3R	NT_033777.3	30237324	30237720	-	12798044	CG43448	Dmel_CG43448	NP_001247363.1	94	uncharacterized protein Dmel_CG43448
3R	NT_033777.3	30241516	30243200	-	43600	CG9737	Dmel_CG9737	NP_651783.1	424	CG9737
3R	NT_033777.3	30244106	30246621	-	43601	CG9733	Dmel_CG9733	NP_651784.2	418	CG9733, isoform A
3R	NT_033777.3	30244106	30246621	-	43601	CG9733	Dmel_CG9733	NP_001287606.1	417	CG9733, isoform B
3R	NT_033777.3	30249593	30250560	+	5740430	CG34299	Dmel_CG34299	NP_001097979.1	185	uncharacterized protein Dmel_CG34299, isoform A
3R	NT_033777.3	30249593	30249945	+	5740430	CG34299	Dmel_CG34299	NP_001247364.1	96	uncharacterized protein Dmel_CG34299, isoform B
3R	NT_033777.3	30251107	30252752	+	43602	CG9682	Dmel_CG9682	NP_651785.4	463	CG9682, isoform C
3R	NT_033777.3	30251107	30252752	+	43602	CG9682	Dmel_CG9682	NP_001287607.1	463	CG9682, isoform B
3R	NT_033777.3	30253192	30254043	+	43603	CG18404	Dmel_CG18404	NP_651786.1	180	uncharacterized protein Dmel_CG18404
3R	NT_033777.3	30278944	30360540	+	43604	hdc	Dmel_CG15532	NP_524592.2	650	headcase, isoform A
3R	NT_033777.3	30278944	30360540	+	43604	hdc	Dmel_CG15532	NP_001263103.1	650	headcase, isoform D
3R	NT_033777.3	30278944	30361830	+	43604	hdc	Dmel_CG15532	NP_788768.1	1080	headcase, isoform C
3R	NT_033777.3	30306016	30306395	-	5740334	CG34300	Dmel_CG34300	NP_001247365.1	87	uncharacterized protein Dmel_CG34300, isoform B
3R	NT_033777.3	30306016	30306640	-	5740334	CG34300	Dmel_CG34300	NP_001097980.1	140	uncharacterized protein Dmel_CG34300, isoform A
3R	NT_033777.3	30358062	30360540	+	43604	hdc	Dmel_CG15532	NP_733357.1	201	headcase, isoform B
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_001247367.1	242	ferritin 1 heavy chain homologue, isoform G
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_733360.1	205	ferritin 1 heavy chain homologue, isoform D
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_001247366.1	242	ferritin 1 heavy chain homologue, isoform F
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_733359.1	205	ferritin 1 heavy chain homologue, isoform C
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_001263104.1	245	ferritin 1 heavy chain homologue, isoform I
3R	NT_033777.3	30385984	30386555	-	46415	Fer1HCH	Dmel_CG2216	NP_001287608.1	169	ferritin 1 heavy chain homologue, isoform J
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_733358.1	205	ferritin 1 heavy chain homologue, isoform B
3R	NT_033777.3	30385984	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_524873.1	205	ferritin 1 heavy chain homologue, isoform A
3R	NT_033777.3	30386298	30387530	-	46415	Fer1HCH	Dmel_CG2216	NP_733361.1	121	ferritin 1 heavy chain homologue, isoform E
3R	NT_033777.3	30389211	30390262	+	44965	Fer2LCH	Dmel_CG1469	NP_733363.1	227	ferritin 2 light chain homologue, isoform C
3R	NT_033777.3	30389211	30390262	+	44965	Fer2LCH	Dmel_CG1469	NP_733362.1	227	ferritin 2 light chain homologue, isoform B
3R	NT_033777.3	30389211	30390262	+	44965	Fer2LCH	Dmel_CG1469	NP_001263105.1	227	ferritin 2 light chain homologue, isoform D
3R	NT_033777.3	30389211	30390262	+	44965	Fer2LCH	Dmel_CG1469	NP_001263106.1	236	ferritin 2 light chain homologue, isoform E
3R	NT_033777.3	30389211	30390262	+	44965	Fer2LCH	Dmel_CG1469	NP_524802.2	227	ferritin 2 light chain homologue, isoform A
3R	NT_033777.3	30419007	30419232	-	43607	CG2217	Dmel_CG2217	NP_001189317.1	51	uncharacterized protein Dmel_CG42740, isoform B
3R	NT_033777.3	30419007	30419232	-	43607	CG2217	Dmel_CG2217	NP_001189316.1	51	uncharacterized protein Dmel_CG42740, isoform A
3R	NT_033777.3	30419007	30419232	-	43607	CG2217	Dmel_CG2217	NP_001287611.1	51	uncharacterized protein Dmel_CG42740, isoform C
3R	NT_033777.3	30421491	30422585	-	43607	CG2217	Dmel_CG2217	NP_001287609.1	364	CG2217, isoform C
3R	NT_033777.3	30421491	30422585	-	43607	CG2217	Dmel_CG2217	NP_001189318.1	364	CG2217, isoform B
3R	NT_033777.3	30421491	30422585	-	43607	CG2217	Dmel_CG2217	NP_001287610.1	364	CG2217, isoform D
3R	NT_033777.3	30421491	30422585	-	43607	CG2217	Dmel_CG2217	NP_651787.1	364	CG2217, isoform A
3R	NT_033777.3	30423406	30423832	-	43608	CG15535	Dmel_CG15535	NP_651788.1	118	uncharacterized protein Dmel_CG15535, isoform A
3R	NT_033777.3	30423406	30423832	-	43608	CG15535	Dmel_CG15535	NP_001287612.1	118	uncharacterized protein Dmel_CG15535, isoform B
3R	NT_033777.3	30424012	30424489	+	43609	mRpS18C	Dmel_CG9688	NP_524593.1	140	mitochondrial ribosomal protein S18C
3R	NT_033777.3	30424571	30425137	-	43610	CG15536	Dmel_CG15536	NP_651789.1	188	uncharacterized protein Dmel_CG15536
3R	NT_033777.3	30426059	30427840	-	43611	CG2218	Dmel_CG2218	NP_651790.1	486	CG2218, isoform A
3R	NT_033777.3	30426059	30427840	-	43611	CG2218	Dmel_CG2218	NP_001287613.1	486	CG2218, isoform B
3R	NT_033777.3	30428842	30431260	+	43612	CG15533	Dmel_CG15533	NP_651791.2	692	uncharacterized protein Dmel_CG15533
3R	NT_033777.3	30432064	30434976	+	43613	CG15534	Dmel_CG15534	NP_651792.1	666	uncharacterized protein Dmel_CG15534
3R	NT_033777.3	30435357	30443241	-	43614	CG15537	Dmel_CG15537	NP_001287614.1	353	uncharacterized protein Dmel_CG15537, isoform C
3R	NT_033777.3	30435357	30443241	-	43614	CG15537	Dmel_CG15537	NP_001097981.1	353	uncharacterized protein Dmel_CG15537, isoform B
3R	NT_033777.3	30444149	30445034	-	43615	Osi23	Dmel_CG15538	NP_651794.2	255	osiris 23
3R	NT_033777.3	30446169	30450255	-	43616	aralar1	Dmel_CG2139	NP_001263107.1	694	aralar1, isoform F
3R	NT_033777.3	30446205	30455716	-	43616	aralar1	Dmel_CG2139	NP_001247368.1	707	aralar1, isoform E
3R	NT_033777.3	30446205	30450255	-	43616	aralar1	Dmel_CG2139	NP_733365.1	682	aralar1, isoform D
3R	NT_033777.3	30446205	30450255	-	43616	aralar1	Dmel_CG2139	NP_651795.2	682	aralar1, isoform A
3R	NT_033777.3	30446205	30455716	-	43616	aralar1	Dmel_CG2139	NP_733364.1	695	aralar1, isoform C
3R	NT_033777.3	30446205	30453445	-	43616	aralar1	Dmel_CG2139	NP_733366.2	679	aralar1, isoform B
3R	NT_033777.3	30457059	30459041	-	43617	CG2224	Dmel_CG2224	NP_001263108.1	420	CG2224, isoform B
3R	NT_033777.3	30457059	30459041	-	43617	CG2224	Dmel_CG2224	NP_651796.1	420	CG2224, isoform A
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_733367.1	704	ceramidase, isoform B
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_733370.1	704	ceramidase, isoform E
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_001263109.1	704	ceramidase, isoform F
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_733368.1	704	ceramidase, isoform C
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_733369.1	704	ceramidase, isoform D
3R	NT_033777.3	30462841	30465561	+	43618	CDase	Dmel_CG1471	NP_651797.1	704	ceramidase, isoform A
3R	NT_033777.3	30474044	30485539	+	43620	PH4alphaEFB	Dmel_CG31022	NP_733371.1	550	prolyl-4-hydroxylase-alpha EFB
3R	NT_033777.3	30476813	30478589	+	318559	spdo	Dmel_CG31020	NP_733372.1	565	sanpodo
3R	NT_033777.3	30487100	30487903	-	43621	Jon99Fii	Dmel_CG2229	NP_651799.1	267	jonah 99Fii
3R	NT_033777.3	30488988	30489791	+	43622	Jon99Fi	Dmel_CG18030	NP_651800.2	267	jonah 99Fi
3R	NT_033777.3	30490140	30491954	+	43623	PH4alphaSG2	Dmel_CG1546	NP_651801.1	527	prolyl-4-hydroxylase-alpha SG2
3R	NT_033777.3	30492022	30496088	-	43624	PH4alphaMP	Dmel_CG9726	NP_524594.2	535	prolyl-4-hydroxylase-alpha MP
3R	NT_033777.3	30496770	30500222	-	43625	PH4alphaNE1	Dmel_CG9728	NP_733374.1	537	prolyl-4-hydroxylase-alpha NE1
3R	NT_033777.3	30501202	30503360	-	43626	CG31371	Dmel_CG31371	NP_733375.2	507	uncharacterized protein Dmel_CG31371, isoform B
3R	NT_033777.3	30501221	30503360	-	43626	CG31371	Dmel_CG31371	NP_001247369.1	485	uncharacterized protein Dmel_CG31371, isoform C
3R	NT_033777.3	30503719	30505630	-	326112	PH4alphaSG1	Dmel_CG31014	NP_733376.1	540	prolyl-4-hydroxylase-alpha SG1
3R	NT_033777.3	30505989	30507944	+	43627	CG15539	Dmel_CG15539	NP_001036776.1	509	uncharacterized protein Dmel_CG15539, isoform B
3R	NT_033777.3	30505989	30507944	+	43627	CG15539	Dmel_CG15539	NP_001287615.1	508	uncharacterized protein Dmel_CG15539, isoform C
3R	NT_033777.3	30506460	30507944	+	43627	CG15539	Dmel_CG15539	NP_651804.2	386	uncharacterized protein Dmel_CG15539, isoform A
3R	NT_033777.3	30508049	30510146	+	3885583	CG34041	Dmel_CG34041	NP_001263110.1	549	uncharacterized protein Dmel_CG34041, isoform E
3R	NT_033777.3	30508049	30508867	+	3885583	CG34041	Dmel_CG34041	NP_001247370.1	220	uncharacterized protein Dmel_CG34041, isoform D
3R	NT_033777.3	30508049	30510146	+	3885583	CG34041	Dmel_CG34041	NP_001034077.5	568	uncharacterized protein Dmel_CG34041, isoform F
3R	NT_033777.3	30510232	30512210	-	43628	PH4alphaNE2	Dmel_CG9720	NP_733378.1	542	prolyl-4-hydroxylase-alpha NE2
3R	NT_033777.3	30512396	30514346	-	318781	CG31524	Dmel_CG31524	NP_001036777.1	535	uncharacterized protein Dmel_CG31524, isoform B
3R	NT_033777.3	30512396	30514346	-	318781	CG31524	Dmel_CG31524	NP_733379.2	536	uncharacterized protein Dmel_CG31524, isoform A
3R	NT_033777.3	30514824	30516919	+	43629	CG9698	Dmel_CG9698	NP_651806.2	547	CG9698
3R	NT_033777.3	30518331	30526329	-	43630	jdp	Dmel_CG2239	NP_651807.1	195	jdp, isoform A
3R	NT_033777.3	30518331	30526329	-	43630	jdp	Dmel_CG2239	NP_733380.1	182	jdp, isoform B
3R	NT_033777.3	30519440	30526329	-	43630	jdp	Dmel_CG2239	NP_733381.1	170	jdp, isoform C
3R	NT_033777.3	30533286	30575508	+	43633	tmod	Dmel_CG1539	NP_001263112.1	454	tropomodulin, isoform Q
3R	NT_033777.3	30533286	30577210	+	43633	tmod	Dmel_CG1539	NP_733384.1	439	tropomodulin, isoform F
3R	NT_033777.3	30533286	30578178	+	43633	tmod	Dmel_CG1539	NP_001247371.1	449	tropomodulin, isoform M
3R	NT_033777.3	30533286	30577210	+	43633	tmod	Dmel_CG1539	NP_733383.1	439	tropomodulin, isoform E
3R	NT_033777.3	30533286	30577210	+	43633	tmod	Dmel_CG1539	NP_733382.1	439	tropomodulin, isoform D
3R	NT_033777.3	30533286	30578246	+	43633	tmod	Dmel_CG1539	NP_001247372.1	567	tropomodulin, isoform N
3R	NT_033777.3	30533286	30577210	+	43633	tmod	Dmel_CG1539	NP_001189320.1	439	tropomodulin, isoform L
3R	NT_033777.3	30533286	30576604	+	43633	tmod	Dmel_CG1539	NP_001097982.1	526	tropomodulin, isoform G
3R	NT_033777.3	30533286	30577210	+	43633	tmod	Dmel_CG1539	NP_001163776.1	439	tropomodulin, isoform I
3R	NT_033777.3	30533286	30573101	+	43633	tmod	Dmel_CG1539	NP_001263111.1	438	tropomodulin, isoform P
3R	NT_033777.3	30539420	30577210	+	43633	tmod	Dmel_CG1539	NP_001163775.1	372	tropomodulin, isoform H
3R	NT_033777.3	30548618	30575508	+	43633	tmod	Dmel_CG1539	NP_001189319.1	424	tropomodulin, isoform K
3R	NT_033777.3	30548618	30577210	+	43633	tmod	Dmel_CG1539	NP_001163777.1	409	tropomodulin, isoform J
3R	NT_033777.3	30548618	30575508	+	43633	tmod	Dmel_CG1539	NP_001247373.1	424	tropomodulin, isoform O
3R	NT_033777.3	30548618	30577210	+	43633	tmod	Dmel_CG1539	NP_733385.1	409	tropomodulin, isoform C
3R	NT_033777.3	30556617	30556760	-	4379867	CG34155	Dmel_CG34155	NP_001036778.1	47	uncharacterized protein Dmel_CG34155
3R	NT_033777.3	30563476	30577210	+	43633	tmod	Dmel_CG1539	NP_477031.1	367	tropomodulin, isoform A
3R	NT_033777.3	30571316	30577210	+	43633	tmod	Dmel_CG1539	NP_477032.1	403	tropomodulin, isoform B
3R	NT_033777.3	30579661	30582062	+	43634	CG9702	Dmel_CG9702	NP_651810.1	676	CG9702, isoform A
3R	NT_033777.3	30579661	30582062	+	43634	CG9702	Dmel_CG9702	NP_001263114.1	672	CG9702, isoform C
3R	NT_033777.3	30579661	30582062	+	43634	CG9702	Dmel_CG9702	NP_001263113.1	676	CG9702, isoform B
3R	NT_033777.3	30582269	30583523	-	43635	Rpt6R	Dmel_CG2241	NP_651811.1	399	regulatory particle triple-A ATPase 6-related
3R	NT_033777.3	30584548	30587068	-	43636	CG9717	Dmel_CG9717	NP_651812.1	638	CG9717
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_001263117.1	356	CG2246, isoform P
3R	NT_033777.3	30593262	30595734	-	43637	CG2246	Dmel_CG2246	NP_001189323.1	385	CG2246, isoform J
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_733389.2	406	CG2246, isoform A
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_733390.1	386	CG2246, isoform C
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_001263116.1	377	CG2246, isoform O
3R	NT_033777.3	30593262	30595734	-	43637	CG2246	Dmel_CG2246	NP_001189322.1	404	CG2246, isoform I
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_001163778.1	387	CG2246, isoform G
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_733388.1	367	CG2246, isoform F
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_001189324.1	367	CG2246, isoform K
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_733386.1	387	CG2246, isoform B
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_001189326.1	367	CG2246, isoform M
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_001189325.1	367	CG2246, isoform L
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_001263115.1	376	CG2246, isoform N
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_733387.1	367	CG2246, isoform D
3R	NT_033777.3	30593262	30595586	-	43637	CG2246	Dmel_CG2246	NP_651813.2	386	CG2246, isoform E
3R	NT_033777.3	30593262	30601220	-	43637	CG2246	Dmel_CG2246	NP_001189321.1	406	CG2246, isoform H
3R	NT_033777.3	30597004	30599296	+	318558	CG31019	Dmel_CG31019	NP_733391.1	659	uncharacterized protein Dmel_CG31019, isoform A
3R	NT_033777.3	30597004	30599296	+	318558	CG31019	Dmel_CG31019	NP_001263118.1	636	uncharacterized protein Dmel_CG31019, isoform B
3R	NT_033777.3	30602285	30603986	+	43638	CG31021	Dmel_CG31021	NP_733392.2	453	uncharacterized protein Dmel_CG31021
3R	NT_033777.3	30604188	30605970	+	326114	PH4alphaNE3	Dmel_CG31017	NP_651814.1	481	prolyl-4-hydroxylase-alpha NE3
3R	NT_033777.3	30606195	30608150	+	326113	CG31016	Dmel_CG31016	NP_001263119.1	536	uncharacterized protein Dmel_CG31016, isoform C
3R	NT_033777.3	30606195	30608150	+	326113	CG31016	Dmel_CG31016	NP_733393.3	536	uncharacterized protein Dmel_CG31016, isoform B
3R	NT_033777.3	30618757	30619073	-	19835263	CG44954	Dmel_CG44954	NP_001287616.1	87	uncharacterized protein Dmel_CG44954
3R	NT_033777.3	30627605	30628831	-	43639	CG2267	Dmel_CG2267	NP_001263120.1	389	CG2267, isoform B
3R	NT_033777.3	30627605	30628831	-	43639	CG2267	Dmel_CG2267	NP_651815.1	390	CG2267, isoform A
3R	NT_033777.3	30643881	30645833	-	326111	CG31013	Dmel_CG31013	NP_733394.3	534	uncharacterized protein Dmel_CG31013
3R	NT_033777.3	30646422	30648496	-	43640	PH4alphaPV	Dmel_CG31015	NP_733395.1	525	prolyl-4-hydroxylase-alpha PV
3R	NT_033777.3	30649167	30649808	+	5740681	CG34432	Dmel_CG34432	NP_001097983.1	213	uncharacterized protein Dmel_CG34432
3R	NT_033777.3	30649968	30650669	+	5740702	CG34433	Dmel_CG34433	NP_001247374.1	212	uncharacterized protein Dmel_CG34433, isoform B
3R	NT_033777.3	30649968	30650669	+	5740702	CG34433	Dmel_CG34433	NP_001097984.1	233	uncharacterized protein Dmel_CG34433, isoform A
3R	NT_033777.3	30690663	30692701	+	43642	Spn100A	Dmel_CG1342	NP_651818.1	649	serpin 100A
3R	NT_033777.3	30694134	30695381	-	43643	CG12069	Dmel_CG12069	NP_651819.1	356	uncharacterized protein Dmel_CG12069, isoform A
3R	NT_033777.3	30694134	30695381	-	43643	CG12069	Dmel_CG12069	NP_733396.3	356	uncharacterized protein Dmel_CG12069, isoform C
3R	NT_033777.3	30695651	30696968	-	43644	Pka-C2	Dmel_CG12066	NP_524595.2	353	protein kinase, cAMP-dependent, catalytic subunit 2, isoform C
3R	NT_033777.3	30695651	30696968	-	43644	Pka-C2	Dmel_CG12066	NP_733397.2	354	protein kinase, cAMP-dependent, catalytic subunit 2, isoform B
3R	NT_033777.3	30705142	30705906	-	318555	CG31010	Dmel_CG31010	NP_001263121.1	254	uncharacterized protein Dmel_CG31010, isoform B
3R	NT_033777.3	30705142	30705906	-	318555	CG31010	Dmel_CG31010	NP_733398.1	254	uncharacterized protein Dmel_CG31010, isoform A
3R	NT_033777.3	30726310	30727749	+	43645	CG1340	Dmel_CG1340	NP_651820.1	459	CG1340, isoform A
3R	NT_033777.3	30726310	30727749	+	43645	CG1340	Dmel_CG1340	NP_001263122.1	459	CG1340, isoform C
3R	NT_033777.3	30729927	30731146	-	43646	CG11313	Dmel_CG11313	NP_651821.3	370	uncharacterized protein Dmel_CG11313, isoform D
3R	NT_033777.3	30729927	30731146	-	43646	CG11313	Dmel_CG11313	NP_001263123.1	367	uncharacterized protein Dmel_CG11313, isoform C
3R	NT_033777.3	30742944	30743816	+	43647	CG15543	Dmel_CG15543	NP_001287617.1	290	uncharacterized protein Dmel_CG15543, isoform B
3R	NT_033777.3	30742944	30743816	+	43647	CG15543	Dmel_CG15543	NP_651822.1	290	uncharacterized protein Dmel_CG15543, isoform A
3R	NT_033777.3	30744754	30745233	-	43648	Npc2g	Dmel_CG11314	NP_001247375.1	159	Niemann-Pick type C-2g, isoform B
3R	NT_033777.3	30744754	30745233	-	43648	Npc2g	Dmel_CG11314	NP_651823.1	159	Niemann-Pick type C-2g, isoform A
3R	NT_033777.3	30745787	30746260	-	43649	Npc2h	Dmel_CG11315	NP_733400.1	130	Niemann-Pick type C-2h, isoform B
3R	NT_033777.3	30745787	30746260	-	43649	Npc2h	Dmel_CG11315	NP_001247376.1	157	Niemann-Pick type C-2h, isoform C
3R	NT_033777.3	30745787	30746260	-	43649	Npc2h	Dmel_CG11315	NP_651824.1	157	Niemann-Pick type C-2h, isoform A
3R	NT_033777.3	30766284	30786203	+	43650	zfh1	Dmel_CG1322	NP_476850.1	1054	Zn finger homeodomain 1, isoform B
3R	NT_033777.3	30766284	30786659	+	43650	zfh1	Dmel_CG1322	NP_733401.3	1206	Zn finger homeodomain 1, isoform E
3R	NT_033777.3	30783600	30786203	+	43650	zfh1	Dmel_CG1322	NP_733402.1	747	Zn finger homeodomain 1, isoform A
3R	NT_033777.3	30790975	30800160	-	43651	wts	Dmel_CG12072	NP_733403.1	1105	warts
3R	NT_033777.3	30807198	30807890	+	43652	dj-1beta	Dmel_CG1349	NP_651825.4	187	dj-1beta
3R	NT_033777.3	30809271	30826045	+	43654	cindr	Dmel_CG31012	NP_733405.2	882	CIN85 and CD2AP related, isoform C
3R	NT_033777.3	30809271	30826045	+	43654	cindr	Dmel_CG31012	NP_001263129.1	941	CIN85 and CD2AP related, isoform J
3R	NT_033777.3	30816964	30826045	+	43654	cindr	Dmel_CG31012	NP_001263124.1	848	CIN85 and CD2AP related, isoform E
3R	NT_033777.3	30818000	30826045	+	43654	cindr	Dmel_CG31012	NP_001263126.1	694	CIN85 and CD2AP related, isoform G
3R	NT_033777.3	30818000	30826045	+	43654	cindr	Dmel_CG31012	NP_733407.2	635	CIN85 and CD2AP related, isoform D
3R	NT_033777.3	30818000	30826045	+	43654	cindr	Dmel_CG31012	NP_001263125.1	692	CIN85 and CD2AP related, isoform F
3R	NT_033777.3	30824364	30826045	+	43654	cindr	Dmel_CG31012	NP_001263127.1	537	CIN85 and CD2AP related, isoform H
3R	NT_033777.3	30824364	30826045	+	43654	cindr	Dmel_CG31012	NP_001263128.1	537	CIN85 and CD2AP related, isoform I
3R	NT_033777.3	30824364	30826045	+	43654	cindr	Dmel_CG31012	NP_651827.1	537	CIN85 and CD2AP related, isoform B
3R	NT_033777.3	30824364	30826760	+	43654	cindr	Dmel_CG31012	NP_733406.1	545	CIN85 and CD2AP related, isoform A
3R	NT_033777.3	30833819	30841220	+	43655	CG15544	Dmel_CG15544	NP_001263130.1	851	uncharacterized protein Dmel_CG15544, isoform B
3R	NT_033777.3	30833819	30841220	+	43655	CG15544	Dmel_CG15544	NP_651828.2	851	uncharacterized protein Dmel_CG15544, isoform A
3R	NT_033777.3	30852547	30854026	+	43656	tll	Dmel_CG1378	NP_524596.1	452	tailless
3R	NT_033777.3	30867672	30868683	+	43657	Cpr100A	Dmel_CG12045	NP_651829.1	241	cuticular protein 100A
3R	NT_033777.3	30871058	30872280	-	43658	CG15545	Dmel_CG15545	NP_651830.1	358	uncharacterized protein Dmel_CG15545
3R	NT_033777.3	30874902	30876134	-	43659	CG15546	Dmel_CG15546	NP_651831.1	410	uncharacterized protein Dmel_CG15546
3R	NT_033777.3	30877698	30879891	-	43660	CG12071	Dmel_CG12071	NP_651832.3	581	uncharacterized protein Dmel_CG12071, isoform D
3R	NT_033777.3	30877698	30879891	-	43660	CG12071	Dmel_CG12071	NP_788769.2	581	uncharacterized protein Dmel_CG12071, isoform E
3R	NT_033777.3	30878576	30879891	-	43660	CG12071	Dmel_CG12071	NP_001303477.1	338	uncharacterized protein Dmel_CG12071, isoform F
3R	NT_033777.3	30878576	30879891	-	43660	CG12071	Dmel_CG12071	NP_001303478.1	338	uncharacterized protein Dmel_CG12071, isoform G
3R	NT_033777.3	30882116	30883399	-	43661	CG15547	Dmel_CG15547	NP_651833.1	390	uncharacterized protein Dmel_CG15547
3R	NT_033777.3	30883913	30886801	-	43662	Sap-r	Dmel_CG12070	NP_733408.2	876	Saposin-related, isoform B
3R	NT_033777.3	30883913	30888933	-	43662	Sap-r	Dmel_CG12070	NP_524597.1	953	Saposin-related, isoform A
3R	NT_033777.3	30894171	30900523	+	43663	Cyp4c3	Dmel_CG1438	NP_524598.1	535	cytochrome P450-4c3
3R	NT_033777.3	30900718	30901435	-	2768693	CG33483	Dmel_CG33483	NP_996313.2	179	uncharacterized protein Dmel_CG33483, isoform A
3R	NT_033777.3	30900718	30902123	-	2768693	CG33483	Dmel_CG33483	NP_001189327.1	229	uncharacterized protein Dmel_CG33483, isoform B
3R	NT_033777.3	30916190	30930040	+	43664	Ptx1	Dmel_CG1447	NP_001138130.2	610	Ptx1, isoform E
3R	NT_033777.3	30916190	30929737	+	43664	Ptx1	Dmel_CG1447	NP_996314.1	514	Ptx1, isoform C
3R	NT_033777.3	30916190	30929737	+	43664	Ptx1	Dmel_CG1447	NP_733410.2	509	Ptx1, isoform A
3R	NT_033777.3	30936045	30936458	-	43665	CG15549	Dmel_CG15549	NP_651834.2	137	uncharacterized protein Dmel_CG15549
3R	NT_033777.3	30936667	30937098	-	43666	CG15550	Dmel_CG15550	NP_651835.1	143	uncharacterized protein Dmel_CG15550
3R	NT_033777.3	30959807	30962251	+	43667	CG15548	Dmel_CG15548	NP_651836.2	814	uncharacterized protein Dmel_CG15548
3R	NT_033777.3	30963448	30964260	-	43668	Ctr1C	Dmel_CG15551	NP_651837.1	270	copper transporter 1C
3R	NT_033777.3	30969884	30971578	-	43669	5-HT7	Dmel_CG12073	NP_001263131.1	564	5-hydroxytryptamine (serotonin) receptor 7, isoform B
3R	NT_033777.3	30969884	30971578	-	43669	5-HT7	Dmel_CG12073	NP_524599.1	564	5-hydroxytryptamine (serotonin) receptor 7, isoform A
3R	NT_033777.3	30989572	30989916	-	318554	CG31008	Dmel_CG31008	NP_733411.1	114	uncharacterized protein Dmel_CG31008
3R	NT_033777.3	30991887	30992417	-	318553	CG31007	Dmel_CG31007	NP_733412.2	176	uncharacterized protein Dmel_CG31007
3R	NT_033777.3	31035389	31036102	+	3772436	CG33773	Dmel_CG33773	NP_001027213.1	179	uncharacterized protein Dmel_CG33773
3R	NT_033777.3	31040139	31046391	+	43670	CanA1	Dmel_CG1455	NP_001247377.1	596	calcineurin A1, isoform B
3R	NT_033777.3	31040139	31046391	+	43670	CanA1	Dmel_CG1455	NP_524600.3	622	calcineurin A1, isoform A
3R	NT_033777.3	31040139	31046391	+	43670	CanA1	Dmel_CG1455	NP_001247378.2	622	calcineurin A1, isoform D
3R	NT_033777.3	31044391	31045105	-	3771875	CG33920	Dmel_CG33920	NP_001027214.1	180	uncharacterized protein Dmel_CG33920
3R	NT_033777.3	31049163	31052412	+	43671	Alp4	Dmel_CG1462	NP_524601.2	596	alkaline phosphatase 4, isoform A
3R	NT_033777.3	31050777	31052412	+	43671	Alp4	Dmel_CG1462	NP_733413.1	502	alkaline phosphatase 4, isoform B
3R	NT_033777.3	31052763	31053713	-	43672	l(3)03670	Dmel_CG1715	NP_651838.1	223	lethal (3) 03670
3R	NT_033777.3	31056529	31057851	-	43673	dco	Dmel_CG2048	NP_733415.1	440	discs overgrown, isoform B
3R	NT_033777.3	31056529	31057851	-	43673	dco	Dmel_CG2048	NP_524602.1	440	discs overgrown, isoform C
3R	NT_033777.3	31056529	31057851	-	43673	dco	Dmel_CG2048	NP_733414.1	440	discs overgrown, isoform A
3R	NT_033777.3	31056529	31057851	-	43673	dco	Dmel_CG2048	NP_001263132.1	440	discs overgrown, isoform D
3R	NT_033777.3	31065439	31083134	+	45039	Sox100B	Dmel_CG15552	NP_651839.1	529	Sox100B
3R	NT_033777.3	31091367	31097069	-	43676	CG11317	Dmel_CG11317	NP_651840.1	295	uncharacterized protein Dmel_CG11317, isoform A
3R	NT_033777.3	31091367	31097069	-	43676	CG11317	Dmel_CG11317	NP_001263133.1	298	uncharacterized protein Dmel_CG11317, isoform B
3R	NT_033777.3	31098991	31101074	-	43677	CG15553	Dmel_CG15553	NP_651841.3	521	uncharacterized protein Dmel_CG15553
3R	NT_033777.3	31106605	31109079	-	43678	CG11318	Dmel_CG11318	NP_651842.3	802	uncharacterized protein Dmel_CG11318
3R	NT_033777.3	31122626	31123381	-	43679	Prosalpha3T	Dmel_CG1736	NP_651843.1	251	proteasome alpha3 subunit, Testis-specific
3R	NT_033777.3	31126237	31127066	+	43680	CG15554	Dmel_CG15554	NP_651844.3	147	uncharacterized protein Dmel_CG15554
3R	NT_033777.3	31128024	31130350	-	43681	CG15556	Dmel_CG15556	NP_651845.2	755	uncharacterized protein Dmel_CG15556, isoform A
3R	NT_033777.3	31128024	31130350	-	43681	CG15556	Dmel_CG15556	NP_001247380.1	755	uncharacterized protein Dmel_CG15556, isoform C
3R	NT_033777.3	31128024	31130350	-	43681	CG15556	Dmel_CG15556	NP_001247379.1	755	uncharacterized protein Dmel_CG15556, isoform B
3R	NT_033777.3	31137501	31171333	+	43682	Gycbeta100B	Dmel_CG1470	NP_524603.2	787	guanylyl cyclase beta-subunit at 100B
3R	NT_033777.3	31158429	31168473	-	43683	stops	Dmel_CG31006	NP_733416.2	521	slow termination of phototransduction, isoform A
3R	NT_033777.3	31158429	31168245	-	43683	stops	Dmel_CG31006	NP_001163780.1	445	slow termination of phototransduction, isoform C
3R	NT_033777.3	31158429	31168245	-	43683	stops	Dmel_CG31006	NP_733417.1	445	slow termination of phototransduction, isoform B
3R	NT_033777.3	31178564	31195454	-	43688	mesh	Dmel_CG31004	NP_001287618.1	1243	mesh, isoform E
3R	NT_033777.3	31178564	31195454	-	43688	mesh	Dmel_CG31004	NP_001163781.1	1243	mesh, isoform C
3R	NT_033777.3	31179920	31195454	-	43688	mesh	Dmel_CG31004	NP_733418.1	1431	mesh, isoform A
3R	NT_033777.3	31179920	31195454	-	43688	mesh	Dmel_CG31004	NP_001163782.1	1454	mesh, isoform D
3R	NT_033777.3	31179920	31195454	-	43688	mesh	Dmel_CG31004	NP_733419.1	1431	mesh, isoform B
3R	NT_033777.3	31193385	31194296	+	43687	bnk	Dmel_CG1480	NP_524604.2	303	bottleneck
3R	NT_033777.3	31197012	31203646	+	43689	CG1544	Dmel_CG1544	NP_651849.1	919	CG1544
3R	NT_033777.3	31204559	31210263	-	43690	chp	Dmel_CG1744	NP_001263137.1	1338	chaoptin, isoform D
3R	NT_033777.3	31204637	31210263	-	43690	chp	Dmel_CG1744	NP_001263136.1	1305	chaoptin, isoform C
3R	NT_033777.3	31204637	31210263	-	43690	chp	Dmel_CG1744	NP_524605.1	1315	chaoptin, isoform A
3R	NT_033777.3	31204637	31210263	-	43690	chp	Dmel_CG1744	NP_001263135.1	1312	chaoptin, isoform F
3R	NT_033777.3	31204637	31210263	-	43690	chp	Dmel_CG1744	NP_001263134.1	1308	chaoptin, isoform E
3R	NT_033777.3	31211185	31213289	-	59247	Zwilch	Dmel_CG18729	NP_733421.1	641	zwilch
3R	NT_033777.3	31213544	31214587	+	43691	CG1542	Dmel_CG1542	NP_651850.1	307	CG1542
3R	NT_033777.3	31214808	31215881	-	43692	CG15561	Dmel_CG15561	NP_651851.1	357	uncharacterized protein Dmel_CG15561
3R	NT_033777.3	31217014	31218990	-	43693	ATPsynC	Dmel_CG1746	NP_733423.1	138	ATP synthase, subunit C, isoform C
3R	NT_033777.3	31217014	31218990	-	43693	ATPsynC	Dmel_CG1746	NP_001247382.1	138	ATP synthase, subunit C, isoform E
3R	NT_033777.3	31217014	31218990	-	43693	ATPsynC	Dmel_CG1746	NP_733422.1	138	ATP synthase, subunit C, isoform B
3R	NT_033777.3	31217014	31218990	-	43693	ATPsynC	Dmel_CG1746	NP_001247384.1	138	ATP synthase, subunit C, isoform G
3R	NT_033777.3	31217014	31218990	-	43693	ATPsynC	Dmel_CG1746	NP_651852.1	138	ATP synthase, subunit C, isoform A
3R	NT_033777.3	31217014	31218828	-	43693	ATPsynC	Dmel_CG1746	NP_001247383.1	134	ATP synthase, subunit C, isoform F
3R	NT_033777.3	31221366	31227842	+	43694	CG12054	Dmel_CG12054	NP_651853.1	628	uncharacterized protein Dmel_CG12054, isoform A
3R	NT_033777.3	31221366	31229124	+	43694	CG12054	Dmel_CG12054	NP_001247386.2	516	uncharacterized protein Dmel_CG12054, isoform F
3R	NT_033777.3	31221366	31229124	+	43694	CG12054	Dmel_CG12054	NP_001247385.2	516	uncharacterized protein Dmel_CG12054, isoform E
3R	NT_033777.3	31226043	31229124	+	43694	CG12054	Dmel_CG12054	NP_733424.2	406	uncharacterized protein Dmel_CG12054, isoform B
3R	NT_033777.3	31231944	31232294	-	43695	CG15563	Dmel_CG15563	NP_651854.2	116	uncharacterized protein Dmel_CG15563
3R	NT_033777.3	31232620	31235281	-	43696	CG15564	Dmel_CG15564	NP_651855.1	511	uncharacterized protein Dmel_CG15564
3R	NT_033777.3	31237228	31251894	-	43697	qless	Dmel_CG31005	NP_001287619.1	436	qless, isoform B
3R	NT_033777.3	31237228	31251894	-	43697	qless	Dmel_CG31005	NP_733425.1	436	qless, isoform A
3R	NT_033777.3	31252919	31253617	+	43698	mRpL32	Dmel_CG12220	NP_524606.1	195	mitochondrial ribosomal protein L32
3R	NT_033777.3	31253659	31254854	-	43699	CG1750	Dmel_CG1750	NP_651857.2	342	CG1750
3R	NT_033777.3	31255243	31256405	+	43700	spn-F	Dmel_CG12114	NP_651858.1	364	spn-F, isoform A
3R	NT_033777.3	31255243	31256441	+	43700	spn-F	Dmel_CG12114	NP_001263138.1	376	spn-F, isoform B
3R	NT_033777.3	31257786	31260032	+	43701	CG3669	Dmel_CG3669	NP_001097987.1	298	CG3669
3R	NT_033777.3	31260407	31261646	+	50101	CG18672	Dmel_CG18672	NP_001287620.1	286	uncharacterized protein Dmel_CG18672, isoform C
3R	NT_033777.3	31260407	31261646	+	50101	CG18672	Dmel_CG18672	NP_652276.2	284	uncharacterized protein Dmel_CG18672, isoform B
3R	NT_033777.3	31260407	31261646	+	50101	CG18672	Dmel_CG18672	NP_001287621.1	281	uncharacterized protein Dmel_CG18672, isoform D
3R	NT_033777.3	31262688	31263817	+	50102	CG18673	Dmel_CG18673	NP_001097988.2	302	uncharacterized protein Dmel_CG18673
3R	NT_033777.3	31265730	31268511	+	43702	ppk24	Dmel_CG15555	NP_651860.2	595	pickpocket 24
3R	NT_033777.3	31302850	31305082	-	43703	CG11340	Dmel_CG11340	NP_001303470.1	526	uncharacterized protein Dmel_CG11340, isoform B
3R	NT_033777.3	31302850	31305082	-	43703	CG11340	Dmel_CG11340	NP_651861.1	526	uncharacterized protein Dmel_CG11340, isoform A
3R	NT_033777.3	31340498	31370248	+	5740668	CG34347	Dmel_CG34347	NP_001138132.3	1512	uncharacterized protein Dmel_CG34347, isoform E
3R	NT_033777.3	31340498	31370248	+	5740668	CG34347	Dmel_CG34347	NP_001097989.2	1517	uncharacterized protein Dmel_CG34347, isoform B
3R	NT_033777.3	31372562	31374067	+	318552	gskt	Dmel_CG31003	NP_733426.1	501	gasket
3R	NT_033777.3	31387111	31390591	+	43707	CG1607	Dmel_CG1607	NP_733427.1	505	CG1607, isoform B
3R	NT_033777.3	31387111	31390591	+	43707	CG1607	Dmel_CG1607	NP_651865.1	505	CG1607, isoform A
3R	NT_033777.3	31387111	31390659	+	43707	CG1607	Dmel_CG1607	NP_001263140.1	507	CG1607, isoform D
3R	NT_033777.3	31387111	31390659	+	43707	CG1607	Dmel_CG1607	NP_001263139.1	507	CG1607, isoform C
3R	NT_033777.3	31391977	31393452	-	318625	CG31204	Dmel_CG31204	NP_733428.2	491	uncharacterized protein Dmel_CG31204
3R	NT_033777.3	31393629	31395254	-	43708	CG31002	Dmel_CG31002	NP_651866.1	521	uncharacterized protein Dmel_CG31002
3R	NT_033777.3	31395991	31401377	+	43709	Gcn2	Dmel_CG1609	NP_477230.1	1589	Gcn2, isoform A
3R	NT_033777.3	31395991	31401377	+	43709	Gcn2	Dmel_CG1609	NP_001263141.1	1589	Gcn2, isoform B
3R	NT_033777.3	31395991	31401377	+	43709	Gcn2	Dmel_CG1609	NP_001263142.1	1591	Gcn2, isoform C
3R	NT_033777.3	31402054	31404557	-	43710	PNPase	Dmel_CG11337	NP_733429.1	771	polynucleotide phosphorylase, isoform B
3R	NT_033777.3	31402054	31404557	-	43710	PNPase	Dmel_CG11337	NP_651867.2	771	polynucleotide phosphorylase, isoform A
3R	NT_033777.3	31402054	31404557	-	43710	PNPase	Dmel_CG11337	NP_001163783.1	771	polynucleotide phosphorylase, isoform D
3R	NT_033777.3	31402054	31404557	-	43710	PNPase	Dmel_CG11337	NP_001097990.2	771	polynucleotide phosphorylase, isoform E
3R	NT_033777.3	31433837	31456466	+	49045	Gprk2	Dmel_CG17998	NP_476867.1	714	G protein-coupled receptor kinase 2, isoform A
3R	NT_033777.3	31433837	31456466	+	49045	Gprk2	Dmel_CG17998	NP_001263143.1	714	G protein-coupled receptor kinase 2, isoform B
3R	NT_033777.3	31458584	31459721	-	43712	lox	Dmel_CG11335	NP_524607.1	360	lysyl oxidase-like
3R	NT_033777.3	31460012	31461945	-	43713	CG11334	Dmel_CG11334	NP_651868.1	364	uncharacterized protein Dmel_CG11334, isoform B
3R	NT_033777.3	31460012	31461945	-	43713	CG11334	Dmel_CG11334	NP_001263144.1	364	uncharacterized protein Dmel_CG11334, isoform C
3R	NT_033777.3	31460012	31461945	-	43713	CG11334	Dmel_CG11334	NP_733430.1	364	uncharacterized protein Dmel_CG11334, isoform A
3R	NT_033777.3	31463350	31464083	+	43714	CG11333	Dmel_CG11333	NP_651869.1	204	uncharacterized protein Dmel_CG11333
3R	NT_033777.3	31502235	31506318	+	43715	mey	Dmel_CG12063	NP_001287622.1	774	morpheyus, isoform B
3R	NT_033777.3	31502235	31506318	+	43715	mey	Dmel_CG12063	NP_651870.3	774	morpheyus, isoform A
3R	NT_033777.3	31558132	31565388	+	43716	nyo	Dmel_CG1499	NP_733431.2	805	nyobe, isoform D
3R	NT_033777.3	31558132	31565388	+	43716	nyo	Dmel_CG1499	NP_651871.2	805	nyobe, isoform C
3R	NT_033777.3	31572239	31575386	+	43717	gammaCOP	Dmel_CG1528	NP_001163784.1	878	coat protein (coatomer) gamma, isoform C
3R	NT_033777.3	31572239	31575386	+	43717	gammaCOP	Dmel_CG1528	NP_524608.1	879	coat protein (coatomer) gamma, isoform A
3R	NT_033777.3	31572239	31575443	+	43717	gammaCOP	Dmel_CG1528	NP_001263145.1	897	coat protein (coatomer) gamma, isoform D
3R	NT_033777.3	31572446	31575386	+	43717	gammaCOP	Dmel_CG1528	NP_733432.1	883	coat protein (coatomer) gamma, isoform B
3R	NT_033777.3	31576892	31579630	-	43718	pygo	Dmel_CG11518	NP_651872.1	815	pygopus
3R	NT_033777.3	31581023	31588107	+	43719	rod	Dmel_CG1569	NP_476705.1	2089	rough deal
3R	NT_033777.3	31588753	31590271	+	43720	CG1635	Dmel_CG1635	NP_651873.3	448	CG1635
3R	NT_033777.3	31590618	31592118	+	43721	CG1638	Dmel_CG1638	NP_001097991.1	443	CG1638
3R	NT_033777.3	31593120	31594595	+	43722	CG1774	Dmel_CG1774	NP_001287623.1	472	CG1774, isoform B
3R	NT_033777.3	31593120	31594595	+	43722	CG1774	Dmel_CG1774	NP_651875.1	472	CG1774, isoform A
3R	NT_033777.3	31594924	31596158	-	43723	RpL6	Dmel_CG11522	NP_651876.1	262	ribosomal protein L6, isoform B
3R	NT_033777.3	31594924	31596158	-	43723	RpL6	Dmel_CG11522	NP_733433.1	243	ribosomal protein L6, isoform A
3R	NT_033777.3	31599273	31602210	-	43724	CycG	Dmel_CG11525	NP_733436.1	566	cyclin G, isoform D
3R	NT_033777.3	31599273	31602210	-	43724	CycG	Dmel_CG11525	NP_524609.2	566	cyclin G, isoform A
3R	NT_033777.3	31599273	31602210	-	43724	CycG	Dmel_CG11525	NP_733435.1	566	cyclin G, isoform C
3R	NT_033777.3	31599273	31602210	-	43724	CycG	Dmel_CG11525	NP_733434.1	566	cyclin G, isoform B
3R	NT_033777.3	31599273	31602210	-	43724	CycG	Dmel_CG11525	NP_001263146.1	566	cyclin G, isoform F
3R	NT_033777.3	31611681	31614901	+	43725	Med	Dmel_CG1775	NP_524610.1	771	medea, isoform A
3R	NT_033777.3	31611681	31614901	+	43725	Med	Dmel_CG1775	NP_733439.2	771	medea, isoform C
3R	NT_033777.3	31611681	31614901	+	43725	Med	Dmel_CG1775	NP_733438.1	697	medea, isoform B
3R	NT_033777.3	31615401	31616003	-	43726	CG11539	Dmel_CG11539	NP_001263148.1	200	uncharacterized protein Dmel_CG11539, isoform B
3R	NT_033777.3	31615401	31616003	-	43726	CG11539	Dmel_CG11539	NP_651877.1	200	uncharacterized protein Dmel_CG11539, isoform A
3R	NT_033777.3	31616402	31617711	+	43727	CG1792	Dmel_CG1792	NP_651878.1	372	CG1792
3R	NT_033777.3	31618538	31621117	+	43728	pasha	Dmel_CG1800	NP_651879.1	642	partner of drosha, isoform A
3R	NT_033777.3	31618538	31621117	+	43728	pasha	Dmel_CG1800	NP_001263150.1	642	partner of drosha, isoform C
3R	NT_033777.3	31619012	31621117	+	43728	pasha	Dmel_CG1800	NP_001263149.1	580	partner of drosha, isoform B
3R	NT_033777.3	31658918	31661609	+	43729	kek6	Dmel_CG1804	NP_651880.1	836	kek6, isoform A
3R	NT_033777.3	31658918	31661630	+	43729	kek6	Dmel_CG1804	NP_001263151.1	843	kek6, isoform B
3R	NT_033777.3	31670779	31677453	+	43730	CG1815	Dmel_CG1815	NP_651881.2	1664	CG1815, isoform C
3R	NT_033777.3	31670779	31675700	+	43730	CG1815	Dmel_CG1815	NP_733442.1	1121	CG1815, isoform B
3R	NT_033777.3	31678227	31679797	-	43731	CG11550	Dmel_CG11550	NP_651882.1	298	uncharacterized protein Dmel_CG11550
3R	NT_033777.3	31707870	31708340	-	10178906	CG42693	Dmel_CG42693	NP_001189328.1	135	uncharacterized protein Dmel_CG42693
3R	NT_033777.3	31727291	31730698	+	48317	ttk	Dmel_CG1856	NP_001189330.1	643	tramtrack, isoform H
3R	NT_033777.3	31727291	31730698	+	48317	ttk	Dmel_CG1856	NP_733447.1	643	tramtrack, isoform F
3R	NT_033777.3	31727291	31734496	+	48317	ttk	Dmel_CG1856	NP_733443.1	813	tramtrack, isoform A
3R	NT_033777.3	31727291	31730698	+	48317	ttk	Dmel_CG1856	NP_733446.1	643	tramtrack, isoform D
3R	NT_033777.3	31727291	31730698	+	48317	ttk	Dmel_CG1856	NP_524911.3	643	tramtrack, isoform C
3R	NT_033777.3	31727291	31734496	+	48317	ttk	Dmel_CG1856	NP_733445.1	813	tramtrack, isoform E
3R	NT_033777.3	31727291	31734496	+	48317	ttk	Dmel_CG1856	NP_733444.1	813	tramtrack, isoform B
3R	NT_033777.3	31727291	31734496	+	48317	ttk	Dmel_CG1856	NP_001189329.1	813	tramtrack, isoform G
3R	NT_033777.3	31735552	31736880	-	43734	CstF-50	Dmel_CG2261	NP_651883.1	424	CstF-50
3R	NT_033777.3	31737142	31737899	+	43735	CG11563	Dmel_CG11563	NP_651884.1	207	uncharacterized protein Dmel_CG11563
3R	NT_033777.3	31740347	31742269	+	43736	Ef1alpha100E	Dmel_CG1873	NP_996315.1	462	elongation factor 1alpha100E, isoform D
3R	NT_033777.3	31740347	31742269	+	43736	Ef1alpha100E	Dmel_CG1873	NP_996316.1	462	elongation factor 1alpha100E, isoform C
3R	NT_033777.3	31740347	31742269	+	43736	Ef1alpha100E	Dmel_CG1873	NP_733449.1	462	elongation factor 1alpha100E, isoform B
3R	NT_033777.3	31740347	31742269	+	43736	Ef1alpha100E	Dmel_CG1873	NP_524611.1	462	elongation factor 1alpha100E, isoform A
3R	NT_033777.3	31743629	31744016	+	43737	CG1890	Dmel_CG1890	NP_651885.1	110	CG1890
3R	NT_033777.3	31744319	31745121	+	43738	CG1896	Dmel_CG1896	NP_651886.1	246	CG1896
3R	NT_033777.3	31745258	31745898	-	43739	awd	Dmel_CG2210	NP_001287624.1	153	abnormal wing discs, isoform E
3R	NT_033777.3	31745258	31745943	-	43739	awd	Dmel_CG2210	NP_476761.3	168	abnormal wing discs, isoform C
3R	NT_033777.3	31745258	31745943	-	43739	awd	Dmel_CG2210	NP_001287625.1	168	abnormal wing discs, isoform D
3R	NT_033777.3	31746567	31747475	-	43740	nero	Dmel_CG2245	NP_651887.1	302	nero
3R	NT_033777.3	31748006	31750712	+	43741	CG1910	Dmel_CG1910	NP_651888.1	489	CG1910, isoform A
3R	NT_033777.3	31749041	31750712	+	43741	CG1910	Dmel_CG1910	NP_733451.1	466	CG1910, isoform C
3R	NT_033777.3	31749276	31750712	+	43741	CG1910	Dmel_CG1910	NP_733453.1	439	CG1910, isoform D
3R	NT_033777.3	31751983	31754618	-	43742	salt	Dmel_CG2196	NP_001287626.1	621	salty dog, isoform C
3R	NT_033777.3	31751983	31754618	-	43742	salt	Dmel_CG2196	NP_651889.3	622	salty dog, isoform B
3R	NT_033777.3	31755434	31758007	-	43743	CG2187	Dmel_CG2187	NP_001189331.1	623	CG2187, isoform B
3R	NT_033777.3	31755434	31758007	-	43743	CG2187	Dmel_CG2187	NP_651890.1	623	CG2187, isoform A
3R	NT_033777.3	31759516	31761471	-	43744	Smvt	Dmel_CG2191	NP_651891.2	591	Sodium-dependent multivitamin transporter
3R	NT_033777.3	31763800	31764665	-	43745	CG2150	Dmel_CG2150	NP_651892.1	188	CG2150
3R	NT_033777.3	31769473	31771758	-	43746	betaGlu	Dmel_CG2135	NP_651893.1	686	beta glucuronidase
3R	NT_033777.3	31772554	31774719	+	43747	sip3	Dmel_CG1937	NP_001263152.1	626	septin interacting protein 3, isoform B
3R	NT_033777.3	31772554	31774719	+	43747	sip3	Dmel_CG1937	NP_651894.3	626	septin interacting protein 3, isoform A
3R	NT_033777.3	31775279	31776552	-	43748	CG2126	Dmel_CG2126	NP_001263153.1	328	CG2126, isoform B
3R	NT_033777.3	31775351	31776552	-	43748	CG2126	Dmel_CG2126	NP_651895.2	304	CG2126, isoform A
3R	NT_033777.3	31778466	31788833	+	43749	faf	Dmel_CG1945	NP_001247388.1	2761	fat facets, isoform E
3R	NT_033777.3	31778466	31789721	+	43749	faf	Dmel_CG1945	NP_524612.2	2778	fat facets, isoform A
3R	NT_033777.3	31778466	31789721	+	43749	faf	Dmel_CG1945	NP_001247387.1	2773	fat facets, isoform D
3R	NT_033777.3	31778466	31788221	+	43749	faf	Dmel_CG1945	NP_733455.1	2711	fat facets, isoform C
3R	NT_033777.3	31778466	31788833	+	43749	faf	Dmel_CG1945	NP_001247389.2	2761	fat facets, isoform I
3R	NT_033777.3	31778466	31789721	+	43749	faf	Dmel_CG1945	NP_001287627.1	2773	fat facets, isoform H
3R	NT_033777.3	31778466	31789721	+	43749	faf	Dmel_CG1945	NP_001247390.1	2773	fat facets, isoform G
3R	NT_033777.3	31791126	31793319	-	43750	CG2118	Dmel_CG2118	NP_001247392.1	634	CG2118, isoform D
3R	NT_033777.3	31791126	31793618	-	43750	CG2118	Dmel_CG2118	NP_651896.1	698	CG2118, isoform A
3R	NT_033777.3	31791126	31793319	-	43750	CG2118	Dmel_CG2118	NP_733456.1	634	CG2118, isoform B
3R	NT_033777.3	31791126	31793618	-	43750	CG2118	Dmel_CG2118	NP_001247391.1	698	CG2118, isoform C
3R	NT_033777.3	31794368	31799538	+	43751	Acf	Dmel_CG1966	NP_536734.2	1476	ATP-dependent chromatin assembly factor large subunit
3R	NT_033777.3	31800172	31805106	-	43754	CG42233	Dmel_CG42233	NP_651899.2	773	uncharacterized protein Dmel_CG42233
3R	NT_033777.3	31800963	31802774	+	43753	Ir100a	Dmel_CG11575	NP_651898.2	603	ionotropic receptor 100a
3R	NT_033777.3	31805594	31806512	+	43755	CG1971	Dmel_CG1971	NP_651900.1	263	CG1971, isoform A
3R	NT_033777.3	31805874	31806512	+	43755	CG1971	Dmel_CG1971	NP_733457.1	212	CG1971, isoform B
3R	NT_033777.3	31805874	31806512	+	43755	CG1971	Dmel_CG1971	NP_001247393.1	212	CG1971, isoform C
3R	NT_033777.3	31805874	31806512	+	43755	CG1971	Dmel_CG1971	NP_001287628.1	212	CG1971, isoform D
3R	NT_033777.3	31807116	31809741	-	43756	CG11576	Dmel_CG11576	NP_651901.3	487	uncharacterized protein Dmel_CG11576
3R	NT_033777.3	31810626	31811365	-	43757	FeCH	Dmel_CG2098	NP_733459.2	226	ferrochelatase, isoform B
3R	NT_033777.3	31810626	31812210	-	43757	FeCH	Dmel_CG2098	NP_524613.1	384	ferrochelatase, isoform A
3R	NT_033777.3	31810994	31812210	-	43757	FeCH	Dmel_CG2098	NP_733458.1	281	ferrochelatase, isoform C
3R	NT_033777.3	31818032	31841769	+	43758	RhoGAP100F	Dmel_CG1976	NP_001163786.1	1866	Rho GTPase activating protein at 100F, isoform D
3R	NT_033777.3	31818032	31839965	+	43758	RhoGAP100F	Dmel_CG1976	NP_001247397.2	1297	Rho GTPase activating protein at 100F, isoform J
3R	NT_033777.3	31818032	31841769	+	43758	RhoGAP100F	Dmel_CG1976	NP_001287629.1	1825	Rho GTPase activating protein at 100F, isoform I
3R	NT_033777.3	31818032	31837207	+	43758	RhoGAP100F	Dmel_CG1976	NP_001163785.1	1191	Rho GTPase activating protein at 100F, isoform B
3R	NT_033777.3	31828050	31841769	+	43758	RhoGAP100F	Dmel_CG1976	NP_001247394.1	1856	Rho GTPase activating protein at 100F, isoform H
3R	NT_033777.3	31828050	31839965	+	43758	RhoGAP100F	Dmel_CG1976	NP_001247395.1	1200	Rho GTPase activating protein at 100F, isoform E
3R	NT_033777.3	31828050	31841769	+	43758	RhoGAP100F	Dmel_CG1976	NP_651902.2	1855	Rho GTPase activating protein at 100F, isoform C
3R	NT_033777.3	31828050	31841769	+	43758	RhoGAP100F	Dmel_CG1976	NP_001247396.1	1853	Rho GTPase activating protein at 100F, isoform F
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001247398.1	799	hephaestus, isoform W
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_733461.2	608	hephaestus, isoform A
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001163790.1	789	hephaestus, isoform R
3R	NT_033777.3	31851855	31933456	-	48571	heph	Dmel_CG31000	NP_001163792.1	581	hephaestus, isoform T
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788774.1	608	hephaestus, isoform E
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001097994.1	608	hephaestus, isoform N
3R	NT_033777.3	31851855	31933456	-	48571	heph	Dmel_CG31000	NP_001163791.1	581	hephaestus, isoform S
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788775.1	608	hephaestus, isoform F
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001247399.1	898	hephaestus, isoform Y
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001163788.1	608	hephaestus, isoform P
3R	NT_033777.3	31851855	31873962	-	48571	heph	Dmel_CG31000	NP_001163789.1	493	hephaestus, isoform Q
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788777.1	608	hephaestus, isoform I
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001163787.1	789	hephaestus, isoform O
3R	NT_033777.3	31851855	31933456	-	48571	heph	Dmel_CG31000	NP_524703.1	581	hephaestus, isoform C
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001287630.1	604	hephaestus, isoform Z
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788773.1	608	hephaestus, isoform D
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788780.1	789	hephaestus, isoform H
3R	NT_033777.3	31851855	31972513	-	48571	heph	Dmel_CG31000	NP_788776.2	615	hephaestus, isoform G
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_733460.1	608	hephaestus, isoform B
3R	NT_033777.3	31851855	31933456	-	48571	heph	Dmel_CG31000	NP_001163793.1	581	hephaestus, isoform U
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788779.1	608	hephaestus, isoform K
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_788778.1	608	hephaestus, isoform J
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001163794.1	608	hephaestus, isoform V
3R	NT_033777.3	31851855	31959118	-	48571	heph	Dmel_CG31000	NP_001097992.1	622	hephaestus, isoform L
3R	NT_033777.3	31851855	31881835	-	48571	heph	Dmel_CG31000	NP_001097993.1	568	hephaestus, isoform M
3R	NT_033777.3	31989299	31989742	+	43761	CG2003	Dmel_CG2003	NP_001287631.1	108	CG2003, isoform C
3R	NT_033777.3	31989299	31990898	+	43761	CG2003	Dmel_CG2003	NP_733463.1	492	CG2003, isoform B
3R	NT_033777.3	31989299	31990898	+	43761	CG2003	Dmel_CG2003	NP_651903.2	492	CG2003, isoform A
3R	NT_033777.3	32038483	32039429	+	43762	CG2053	Dmel_CG2053	NP_001287632.1	298	CG2053, isoform B
3R	NT_033777.3	32038483	32039429	+	43762	CG2053	Dmel_CG2053	NP_651904.2	298	CG2053, isoform A
3R	NT_033777.3	32049028	32051839	-	53554	krz	Dmel_CG1487	NP_001247400.1	470	kurtz, isoform B
3R	NT_033777.3	32049028	32051839	-	53554	krz	Dmel_CG1487	NP_524988.1	470	kurtz, isoform A
3R	NT_033777.3	32052735	32054764	+	43764	mod	Dmel_CG2050	NP_524614.2	542	modulo, isoform A
3R	NT_033777.3	32052735	32054764	+	43764	mod	Dmel_CG2050	NP_001247401.1	542	modulo, isoform C
3R	NT_033777.3	32057322	32067996	-	43765	Map205	Dmel_CG1483	NP_001263154.1	1109	Microtubule-associated protein 205, isoform C
3R	NT_033777.3	32057322	32067996	-	43765	Map205	Dmel_CG1483	NP_524615.1	1163	Microtubule-associated protein 205, isoform A
3R	NT_033777.3	32057322	32067996	-	43765	Map205	Dmel_CG1483	NP_733465.1	1185	Microtubule-associated protein 205, isoform B
