Name	Replicon Accession	Start	Stop	Strand	GeneID	Locus	Locus tag	Protein product	Length	Protein name
3L	NT_037436.4	24193	26078	+	38013	mthl8	Dmel_CG32475	NP_611998.1	492	methuselah-like 8, isoform A
3L	NT_037436.4	24193	26078	+	38013	mthl8	Dmel_CG32475	NP_001261182.1	492	methuselah-like 8, isoform B
3L	NT_037436.4	54481	54669	-	12798539	CG43149	Dmel_CG43149	NP_001246520.1	62	uncharacterized protein Dmel_CG43149
3L	NT_037436.4	66515	68898	+	38015	Lsp1gamma	Dmel_CG6821	NP_523868.1	772	larval serum protein 1 gamma
3L	NT_037436.4	74638	75210	-	38016	CG13405	Dmel_CG13405	NP_611999.1	190	uncharacterized protein Dmel_CG13405, isoform A
3L	NT_037436.4	74638	75210	-	38016	CG13405	Dmel_CG13405	NP_001246522.1	190	uncharacterized protein Dmel_CG13405, isoform B
3L	NT_037436.4	97923	98329	-	50161	CG12483	Dmel_CG12483	NP_652326.1	88	uncharacterized protein Dmel_CG12483
3L	NT_037436.4	129823	143820	+	38017	Pdk1	Dmel_CG1210	NP_001261183.1	836	Phosphoinositide-dependent kinase 1, isoform J
3L	NT_037436.4	129823	143820	+	38017	Pdk1	Dmel_CG1210	NP_728471.2	836	Phosphoinositide-dependent kinase 1, isoform D
3L	NT_037436.4	132795	143820	+	38017	Pdk1	Dmel_CG1210	NP_728470.1	819	Phosphoinositide-dependent kinase 1, isoform C
3L	NT_037436.4	135635	143820	+	38017	Pdk1	Dmel_CG1210	NP_525121.2	755	Phosphoinositide-dependent kinase 1, isoform A
3L	NT_037436.4	135635	143820	+	38017	Pdk1	Dmel_CG1210	NP_728473.1	755	Phosphoinositide-dependent kinase 1, isoform H
3L	NT_037436.4	135635	143820	+	38017	Pdk1	Dmel_CG1210	NP_728472.1	755	Phosphoinositide-dependent kinase 1, isoform F
3L	NT_037436.4	141841	143820	+	38017	Pdk1	Dmel_CG1210	NP_728475.1	539	Phosphoinositide-dependent kinase 1, isoform E
3L	NT_037436.4	141841	143820	+	38017	Pdk1	Dmel_CG1210	NP_728474.1	539	Phosphoinositide-dependent kinase 1, isoform B
3L	NT_037436.4	141841	143820	+	38017	Pdk1	Dmel_CG1210	NP_728476.1	539	Phosphoinositide-dependent kinase 1, isoform G
3L	NT_037436.4	146504	148970	+	38019	CG6845	Dmel_CG6845	NP_001137858.1	303	CG6845, isoform D
3L	NT_037436.4	146504	148970	+	38019	CG6845	Dmel_CG6845	NP_612000.3	672	CG6845, isoform C
3L	NT_037436.4	147755	148970	+	38019	CG6845	Dmel_CG6845	NP_001137859.1	334	CG6845, isoform E
3L	NT_037436.4	149808	152036	-	38020	Dic61B	Dmel_CG7051	NP_612001.1	684	dynein intermediate chain at 61B, isoform B
3L	NT_037436.4	149808	152397	-	38020	Dic61B	Dmel_CG7051	NP_728477.1	764	dynein intermediate chain at 61B, isoform A
3L	NT_037436.4	153071	173908	+	38021	p130CAS	Dmel_CG1212	NP_001097456.2	831	p130CAS, isoform D
3L	NT_037436.4	161252	173908	+	38021	p130CAS	Dmel_CG1212	NP_001163302.1	793	p130CAS, isoform G
3L	NT_037436.4	172202	173908	+	38021	p130CAS	Dmel_CG1212	NP_728478.1	568	p130CAS, isoform B
3L	NT_037436.4	172202	173908	+	38021	p130CAS	Dmel_CG1212	NP_001137861.1	568	p130CAS, isoform F
3L	NT_037436.4	172205	173908	+	38021	p130CAS	Dmel_CG1212	NP_001137860.1	567	p130CAS, isoform E
3L	NT_037436.4	175193	176203	-	38022	CG7049	Dmel_CG7049	NP_612003.1	336	CG7049
3L	NT_037436.4	176690	177837	-	38023	Vdup1	Dmel_CG7047	NP_001163303.1	342	vitamin 
3L	NT_037436.4	176690	177837	-	38023	Vdup1	Dmel_CG7047	NP_001261184.1	342	vitamin 
3L	NT_037436.4	176690	177837	-	38023	Vdup1	Dmel_CG7047	NP_728479.1	342	vitamin 
3L	NT_037436.4	176690	177837	-	38023	Vdup1	Dmel_CG7047	NP_995943.1	342	vitamin 
3L	NT_037436.4	176690	177837	-	38023	Vdup1	Dmel_CG7047	NP_612004.2	342	vitamin 
3L	NT_037436.4	180777	182416	+	38024	CG13875	Dmel_CG13875	NP_001261185.1	486	uncharacterized protein Dmel_CG13875, isoform B
3L	NT_037436.4	180777	182416	+	38024	CG13875	Dmel_CG13875	NP_612005.1	486	uncharacterized protein Dmel_CG13875, isoform A
3L	NT_037436.4	182654	183265	-	4379908	CG34140	Dmel_CG34140	NP_001286881.1	203	MAP kinase-specific phosphatase, isoform D
3L	NT_037436.4	182654	183265	-	4379908	CG34140	Dmel_CG34140	NP_001286882.1	203	MAP kinase-specific phosphatase, isoform C
3L	NT_037436.4	182654	183265	-	4379908	CG34140	Dmel_CG34140	NP_001036573.1	203	MAP kinase-specific phosphatase, isoform A
3L	NT_037436.4	182654	183265	-	4379908	CG34140	Dmel_CG34140	NP_001036572.1	203	MAP kinase-specific phosphatase, isoform B
3L	NT_037436.4	183273	184364	-	4379908	CG34140	Dmel_CG34140	NP_001036574.1	306	uncharacterized protein Dmel_CG34140
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_523869.1	316	mitochondrial carrier homolog 1, isoform A
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_001246525.1	316	mitochondrial carrier homolog 1, isoform E
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_728481.1	316	mitochondrial carrier homolog 1, isoform B
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_001246527.1	316	mitochondrial carrier homolog 1, isoform G
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_728482.1	316	mitochondrial carrier homolog 1, isoform C
3L	NT_037436.4	184864	185998	+	38026	Mtch	Dmel_CG6851	NP_001246526.1	316	mitochondrial carrier homolog 1, isoform F
3L	NT_037436.4	188549	198587	-	38027	rno	Dmel_CG7036	NP_995944.1	3241	rhinoceros, isoform B
3L	NT_037436.4	188549	198587	-	38027	rno	Dmel_CG7036	NP_001246528.1	3241	rhinoceros, isoform D
3L	NT_037436.4	188549	198587	-	38027	rno	Dmel_CG7036	NP_612007.2	3241	rhinoceros, isoform C
3L	NT_037436.4	200472	202031	+	38028	mri	Dmel_CG1216	NP_728484.1	439	mrityu, isoform A
3L	NT_037436.4	200472	202031	+	38028	mri	Dmel_CG1216	NP_612008.1	439	mrityu, isoform B
3L	NT_037436.4	200472	202031	+	38028	mri	Dmel_CG1216	NP_001286883.1	438	mrityu, isoform E
3L	NT_037436.4	202214	205637	-	43913	Gk1	Dmel_CG18374	NP_524655.1	538	glycerol kinase 1, isoform A
3L	NT_037436.4	202214	205445	-	43913	Gk1	Dmel_CG18374	NP_728486.1	474	glycerol kinase 1, isoform B
3L	NT_037436.4	203860	205242	+	38029	NitFhit	Dmel_CG7067	NP_525122.1	460	nitrilase and fragile histidine triad fusion protein
3L	NT_037436.4	206192	207112	+	38031	CG13876	Dmel_CG13876	NP_612009.1	287	uncharacterized protein Dmel_CG13876
3L	NT_037436.4	208114	211308	-	38032	CG7028	Dmel_CG7028	NP_001286886.1	907	CG7028, isoform E
3L	NT_037436.4	208114	211308	-	38032	CG7028	Dmel_CG7028	NP_001286885.1	906	CG7028, isoform D
3L	NT_037436.4	208114	211308	-	38032	CG7028	Dmel_CG7028	NP_001261186.1	911	CG7028, isoform B
3L	NT_037436.4	208114	211308	-	38032	CG7028	Dmel_CG7028	NP_001286884.1	912	CG7028, isoform C
3L	NT_037436.4	208114	211308	-	38032	CG7028	Dmel_CG7028	NP_612010.1	907	CG7028, isoform A
3L	NT_037436.4	211698	212687	-	38033	thoc7	Dmel_CG17143	NP_728489.2	288	thoc7, isoform A
3L	NT_037436.4	211698	212687	-	38033	thoc7	Dmel_CG17143	NP_612011.1	287	thoc7, isoform B
3L	NT_037436.4	212750	216109	+	38034	CG16940	Dmel_CG16940	NP_728490.1	1044	uncharacterized protein Dmel_CG16940, isoform C
3L	NT_037436.4	212845	216109	+	38034	CG16940	Dmel_CG16940	NP_612012.1	1032	uncharacterized protein Dmel_CG16940, isoform A
3L	NT_037436.4	217421	217892	+	3772691	Kaz1-ORFB	Dmel_CG1220	NP_728495.1	114	Kaz1-ORFB, isoform E
3L	NT_037436.4	217421	217816	+	3772691	Kaz1-ORFB	Dmel_CG1220	NP_001027091.1	115	Kaz1-ORFB, isoform H
3L	NT_037436.4	217421	217892	+	3772691	Kaz1-ORFB	Dmel_CG1220	NP_612013.3	114	Kaz1-ORFB, isoform A
3L	NT_037436.4	217421	217892	+	3772691	Kaz1-ORFB	Dmel_CG1220	NP_728496.2	114	Kaz1-ORFB, isoform F
3L	NT_037436.4	218180	218590	+	38036	CG13877	Dmel_CG13877	NP_001189013.1	107	uncharacterized protein Dmel_CG13877, isoform C
3L	NT_037436.4	218180	218590	+	38036	CG13877	Dmel_CG13877	NP_612014.2	108	uncharacterized protein Dmel_CG13877, isoform B
3L	NT_037436.4	218669	220352	-	38037	pyx	Dmel_CG17142	NP_728501.1	538	pyrexia, isoform B
3L	NT_037436.4	218669	222611	-	38037	pyx	Dmel_CG17142	NP_612015.1	956	pyrexia, isoform A
3L	NT_037436.4	224254	224757	+	2768996	CG33229	Dmel_CG33229	NP_001286887.1	167	uncharacterized protein Dmel_CG33229, isoform B
3L	NT_037436.4	224254	224757	+	2768996	CG33229	Dmel_CG33229	NP_995945.1	167	uncharacterized protein Dmel_CG33229, isoform A
3L	NT_037436.4	231016	231589	-	10178831	CG42846	Dmel_CG42846	NP_001189014.1	167	uncharacterized protein Dmel_CG42846
3L	NT_037436.4	231834	232302	-	5740130	CG34454	Dmel_CG34454	NP_001097457.1	133	uncharacterized protein Dmel_CG34454
3L	NT_037436.4	232657	233351	-	5740693	CG34453	Dmel_CG34453	NP_001097458.2	175	uncharacterized protein Dmel_CG34453
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_728505.1	2649	enhancer of bithorax, isoform B
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_728507.1	2669	enhancer of bithorax, isoform A
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_001261190.1	2669	enhancer of bithorax, isoform J
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_001261189.1	2668	enhancer of bithorax, isoform I
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_001163304.1	2669	enhancer of bithorax, isoform E
3L	NT_037436.4	234299	246216	-	44811	E(bx)	Dmel_CG32346	NP_001261188.1	2761	enhancer of bithorax, isoform H
3L	NT_037436.4	236880	246216	-	44811	E(bx)	Dmel_CG32346	NP_001261187.1	2163	enhancer of bithorax, isoform G
3L	NT_037436.4	239040	246216	-	44811	E(bx)	Dmel_CG32346	NP_995946.1	2159	enhancer of bithorax, isoform C
3L	NT_037436.4	239040	246216	-	44811	E(bx)	Dmel_CG32346	NP_001163305.1	2139	enhancer of bithorax, isoform F
3L	NT_037436.4	248001	249964	+	318046	mthl14	Dmel_CG32476	NP_728509.1	533	methuselah-like 14
3L	NT_037436.4	250510	257625	-	252479	DIP2	Dmel_CG7020	NP_001261192.1	1772	DISCO interacting protein 2, isoform D
3L	NT_037436.4	250510	257625	-	252479	DIP2	Dmel_CG7020	NP_001261191.1	1756	DISCO interacting protein 2, isoform C
3L	NT_037436.4	250510	257625	-	252479	DIP2	Dmel_CG7020	NP_612019.2	1773	DISCO interacting protein 2, isoform A
3L	NT_037436.4	250510	257625	-	252479	DIP2	Dmel_CG7020	NP_001261193.1	1767	DISCO interacting protein 2, isoform E
3L	NT_037436.4	250510	257625	-	252479	DIP2	Dmel_CG7020	NP_001246530.1	1755	DISCO interacting protein 2, isoform B
3L	NT_037436.4	258392	258997	+	38044	wac	Dmel_CG13879	NP_612020.2	163	wee augmin, isoform B
3L	NT_037436.4	258392	258997	+	38044	wac	Dmel_CG13879	NP_001261194.1	163	wee augmin, isoform D
3L	NT_037436.4	258486	258997	+	38044	wac	Dmel_CG13879	NP_001163306.1	150	wee augmin, isoform C
3L	NT_037436.4	259503	264210	-	38045	Tudor-SN	Dmel_CG7008	NP_612021.1	926	tudor staphylococcal nuclease, isoform A
3L	NT_037436.4	259503	264210	-	38045	Tudor-SN	Dmel_CG7008	NP_001261195.1	926	tudor staphylococcal nuclease, isoform B
3L	NT_037436.4	264852	265444	+	38046	mRpL17	Dmel_CG13880	NP_001261196.1	176	mitochondrial ribosomal protein L17, isoform B
3L	NT_037436.4	264852	265444	+	38046	mRpL17	Dmel_CG13880	NP_523870.2	176	mitochondrial ribosomal protein L17, isoform A
3L	NT_037436.4	265595	265908	-	5740488	CG34263	Dmel_CG34263	NP_001097459.1	85	uncharacterized protein Dmel_CG34263
3L	NT_037436.4	268243	269119	+	38047	miple1	Dmel_CG1221	NP_995947.1	185	midkine and pleiotrophin 1, isoform B
3L	NT_037436.4	268243	269119	+	38047	miple1	Dmel_CG1221	NP_001261197.1	185	midkine and pleiotrophin 1, isoform C
3L	NT_037436.4	268243	269119	+	38047	miple1	Dmel_CG1221	NP_612022.1	185	midkine and pleiotrophin 1, isoform A
3L	NT_037436.4	272210	273370	-	318243	CG32845	Dmel_CG32845	NP_728511.1	386	uncharacterized protein Dmel_CG32845
3L	NT_037436.4	273565	274889	+	44787	miple2	Dmel_CG18321	NP_001261199.1	281	midkine and pleiotrophin 2, isoform E
3L	NT_037436.4	273565	274889	+	44787	miple2	Dmel_CG18321	NP_001261198.1	282	midkine and pleiotrophin 2, isoform D
3L	NT_037436.4	273565	274889	+	44787	miple2	Dmel_CG18321	NP_001261200.1	279	midkine and pleiotrophin 2, isoform F
3L	NT_037436.4	273565	274889	+	44787	miple2	Dmel_CG18321	NP_651996.2	279	midkine and pleiotrophin 2, isoform A
3L	NT_037436.4	273565	274889	+	44787	miple2	Dmel_CG18321	NP_001261201.1	279	midkine and pleiotrophin 2, isoform G
3L	NT_037436.4	275338	276567	+	38049	ttm2	Dmel_CG12313	NP_612023.1	409	tiny tim 2
3L	NT_037436.4	278200	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_001261202.1	3518	Rho guanine nucleotide exchange factor 3, isoform M
3L	NT_037436.4	278200	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_612024.4	3519	Rho guanine nucleotide exchange factor 3, isoform L
3L	NT_037436.4	292899	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_612026.2	1026	Rho guanine nucleotide exchange factor 3, isoform H
3L	NT_037436.4	297898	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_612027.2	1011	Rho guanine nucleotide exchange factor 3, isoform A
3L	NT_037436.4	297898	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_001137862.1	1011	Rho guanine nucleotide exchange factor 3, isoform F
3L	NT_037436.4	300732	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_728515.1	932	Rho guanine nucleotide exchange factor 3, isoform B
3L	NT_037436.4	300732	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_728517.1	925	Rho guanine nucleotide exchange factor 3, isoform C
3L	NT_037436.4	300732	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_728516.1	930	Rho guanine nucleotide exchange factor 3, isoform E
3L	NT_037436.4	300868	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_001137863.1	920	Rho guanine nucleotide exchange factor 3, isoform G
3L	NT_037436.4	301168	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_001163307.1	820	Rho guanine nucleotide exchange factor 3, isoform J
3L	NT_037436.4	301168	303883	+	38050	RhoGEF3	Dmel_CG43976	NP_001163308.1	820	Rho guanine nucleotide exchange factor 3, isoform K
3L	NT_037436.4	306359	314027	-	45374	fwd	Dmel_CG7004	NP_728518.1	1674	four wheel drive, isoform B
3L	NT_037436.4	306359	314027	-	45374	fwd	Dmel_CG7004	NP_524822.1	1674	four wheel drive, isoform A
3L	NT_037436.4	306359	311281	-	45374	fwd	Dmel_CG7004	NP_728519.1	1338	four wheel drive, isoform C
3L	NT_037436.4	306359	314027	-	45374	fwd	Dmel_CG7004	NP_001261203.1	1674	four wheel drive, isoform D
3L	NT_037436.4	317208	317621	+	5740226	CG34264	Dmel_CG34264	NP_001097460.1	114	uncharacterized protein Dmel_CG34264, isoform D
3L	NT_037436.4	317208	317614	+	5740226	CG34264	Dmel_CG34264	NP_001137865.1	117	uncharacterized protein Dmel_CG34264, isoform C
3L	NT_037436.4	317208	317614	+	5740226	CG34264	Dmel_CG34264	NP_001137864.1	117	uncharacterized protein Dmel_CG34264, isoform B
3L	NT_037436.4	321929	324655	-	326208	CG32344	Dmel_CG32344	NP_612028.4	827	uncharacterized protein Dmel_CG32344
3L	NT_037436.4	325236	327641	-	38055	Atac3	Dmel_CG32343	NP_728520.2	576	Ada2a-containing complex component 3, isoform B
3L	NT_037436.4	325236	327641	-	38055	Atac3	Dmel_CG32343	NP_001246531.1	583	Ada2a-containing complex component 3, isoform D
3L	NT_037436.4	325236	327641	-	38055	Atac3	Dmel_CG32343	NP_001137866.1	576	Ada2a-containing complex component 3, isoform C
3L	NT_037436.4	325236	327641	-	38055	Atac3	Dmel_CG32343	NP_001261204.1	583	Ada2a-containing complex component 3, isoform E
3L	NT_037436.4	330040	331936	-	38056	mthl9	Dmel_CG17084	NP_612029.1	513	methuselah-like 9
3L	NT_037436.4	333475	336682	-	38057	mthl10	Dmel_CG17061	NP_788446.2	585	methuselah-like 10, isoform B
3L	NT_037436.4	333475	336682	-	38057	mthl10	Dmel_CG17061	NP_001261206.1	575	methuselah-like 10, isoform G
3L	NT_037436.4	333475	336682	-	38057	mthl10	Dmel_CG17061	NP_001261205.1	575	methuselah-like 10, isoform F
3L	NT_037436.4	333475	336682	-	38057	mthl10	Dmel_CG17061	NP_001246534.1	575	methuselah-like 10, isoform E
3L	NT_037436.4	333957	336682	-	38057	mthl10	Dmel_CG17061	NP_001246532.1	584	methuselah-like 10, isoform C
3L	NT_037436.4	334283	336682	-	38057	mthl10	Dmel_CG17061	NP_001246533.1	557	methuselah-like 10, isoform D
3L	NT_037436.4	334658	336682	-	38057	mthl10	Dmel_CG17061	NP_612030.2	577	methuselah-like 10, isoform A
3L	NT_037436.4	343544	345881	-	38058	mth	Dmel_CG6936	NP_728521.1	522	methuselah, isoform B
3L	NT_037436.4	343955	345881	-	38058	mth	Dmel_CG6936	NP_523871.1	514	methuselah, isoform A
3L	NT_037436.4	343955	345881	-	38058	mth	Dmel_CG6936	NP_001246535.1	514	methuselah, isoform E
3L	NT_037436.4	351626	355527	+	38059	Ptpmeg	Dmel_CG1228	NP_728522.2	974	protein tyrosine phosphatase Meg, isoform K
3L	NT_037436.4	351626	355527	+	38059	Ptpmeg	Dmel_CG1228	NP_728523.2	974	protein tyrosine phosphatase Meg, isoform H
3L	NT_037436.4	351626	355527	+	38059	Ptpmeg	Dmel_CG1228	NP_001163309.2	974	protein tyrosine phosphatase Meg, isoform I
3L	NT_037436.4	351626	355527	+	38059	Ptpmeg	Dmel_CG1228	NP_001163310.2	974	protein tyrosine phosphatase Meg, isoform J
3L	NT_037436.4	351626	355527	+	38059	Ptpmeg	Dmel_CG1228	NP_612031.3	974	protein tyrosine phosphatase Meg, isoform G
3L	NT_037436.4	356422	357459	+	38060	CG1231	Dmel_CG1231	NP_612032.1	345	CG1231
3L	NT_037436.4	358031	358399	+	53445	Roc1b	Dmel_CG16988	NP_652613.1	122	regulator of cullins 1b
3L	NT_037436.4	358497	361128	-	38062	Cdc5	Dmel_CG6905	NP_001163313.1	814	cell division cycle 5, isoform B
3L	NT_037436.4	358497	361128	-	38062	Cdc5	Dmel_CG6905	NP_612033.1	814	cell division cycle 5, isoform A
3L	NT_037436.4	361658	365246	+	38063	CG1233	Dmel_CG1233	NP_612034.1	1129	CG1233, isoform B
3L	NT_037436.4	362275	365246	+	38063	CG1233	Dmel_CG1233	NP_728528.1	941	CG1233, isoform A
3L	NT_037436.4	365831	366322	-	38064	CG13884	Dmel_CG13884	NP_612035.1	163	uncharacterized protein Dmel_CG13884
3L	NT_037436.4	367390	376663	-	38065	trh	Dmel_CG42865	NP_001261207.1	1022	trachealess, isoform D
3L	NT_037436.4	367582	391760	-	38065	trh	Dmel_CG42865	NP_001261209.1	989	trachealess, isoform F
3L	NT_037436.4	367582	391760	-	38065	trh	Dmel_CG42865	NP_001097461.2	966	trachealess, isoform C
3L	NT_037436.4	367582	376663	-	38065	trh	Dmel_CG42865	NP_001261210.1	923	trachealess, isoform G
3L	NT_037436.4	367582	376663	-	38065	trh	Dmel_CG42865	NP_523872.2	958	trachealess, isoform A
3L	NT_037436.4	367582	376663	-	38065	trh	Dmel_CG42865	NP_001261208.1	952	trachealess, isoform E
3L	NT_037436.4	367582	376663	-	38065	trh	Dmel_CG42865	NP_001036575.1	929	trachealess, isoform B
3L	NT_037436.4	433230	433706	-	38066	CG13891	Dmel_CG13891	NP_612036.1	158	uncharacterized protein Dmel_CG13891
3L	NT_037436.4	435118	445761	-	38067	klar	Dmel_CG17046	NP_001261213.1	1180	klarsicht, isoform G
3L	NT_037436.4	435118	508511	-	38067	klar	Dmel_CG17046	NP_523873.2	2262	klarsicht, isoform A
3L	NT_037436.4	435118	440587	-	38067	klar	Dmel_CG17046	NP_001097462.1	567	klarsicht, isoform C
3L	NT_037436.4	435118	508511	-	38067	klar	Dmel_CG17046	NP_001036576.1	2045	klarsicht, isoform B
3L	NT_037436.4	435118	436775	-	38067	klar	Dmel_CG17046	NP_001286889.1	511	klarsicht, isoform I
3L	NT_037436.4	435118	508511	-	38067	klar	Dmel_CG17046	NP_001261211.1	2272	klarsicht, isoform E
3L	NT_037436.4	435118	453236	-	38067	klar	Dmel_CG17046	NP_001261212.1	1636	klarsicht, isoform F
3L	NT_037436.4	442876	508511	-	38067	klar	Dmel_CG17046	NP_001097463.1	1823	klarsicht, isoform D
3L	NT_037436.4	442876	453236	-	38067	klar	Dmel_CG17046	NP_001286888.1	1197	klarsicht, isoform H
3L	NT_037436.4	500077	500373	-	5740365	CG34267	Dmel_CG34267	NP_001097464.1	77	uncharacterized protein Dmel_CG34267
3L	NT_037436.4	501025	501339	+	5740141	CG34268	Dmel_CG34268	NP_001097465.1	83	uncharacterized protein Dmel_CG34268
3L	NT_037436.4	528419	528994	+	5740713	CG34269	Dmel_CG34269	NP_001097466.1	191	uncharacterized protein Dmel_CG34269
3L	NT_037436.4	541041	542062	+	38068	CG17180	Dmel_CG17180	NP_612037.1	302	uncharacterized protein Dmel_CG17180, isoform A
3L	NT_037436.4	541041	542062	+	38068	CG17180	Dmel_CG17180	NP_001261214.1	302	uncharacterized protein Dmel_CG17180, isoform B
3L	NT_037436.4	542230	542852	-	38069	Cypl	Dmel_CG13892	NP_523874.1	176	Cyclophilin-like
3L	NT_037436.4	547779	574201	+	38070	Hipk	Dmel_CG17090	NP_612038.2	1340	homeodomain interacting protein kinase, isoform A
3L	NT_037436.4	547779	574201	+	38070	Hipk	Dmel_CG17090	NP_728531.1	1340	homeodomain interacting protein kinase, isoform B
3L	NT_037436.4	569414	574201	+	38070	Hipk	Dmel_CG17090	NP_001261215.1	1256	homeodomain interacting protein kinase, isoform C
3L	NT_037436.4	581563	582621	+	38071	Ppm1	Dmel_CG12169	NP_612039.1	352	Ppm1
3L	NT_037436.4	583984	585441	-	38072	Kah	Dmel_CG17181	NP_612040.1	442	kahuli
3L	NT_037436.4	593426	598574	+	38073	MED14	Dmel_CG12031	NP_612041.2	1553	mediator complex subunit 14, isoform A
3L	NT_037436.4	593426	598574	+	38073	MED14	Dmel_CG12031	NP_728534.2	1555	mediator complex subunit 14, isoform C
3L	NT_037436.4	599484	603424	-	38074	CG13893	Dmel_CG13893	NP_612042.3	407	uncharacterized protein Dmel_CG13893
3L	NT_037436.4	605196	606500	-	38075	Reg-2	Dmel_CG3200	NP_612043.1	260	rhythmically expressed gene 2
3L	NT_037436.4	621646	622164	-	12798544	CG43337	Dmel_CG43337	NP_001246536.1	172	uncharacterized protein Dmel_CG43337, isoform A
3L	NT_037436.4	621646	622164	-	12798544	CG43337	Dmel_CG43337	NP_728535.1	172	uncharacterized protein Dmel_CG43337, isoform B
3L	NT_037436.4	649180	651105	+	38076	Gale	Dmel_CG12030	NP_001246537.1	350	UDP-galactose 4\'-epimerase, isoform B
3L	NT_037436.4	649180	651105	+	38076	Gale	Dmel_CG12030	NP_612044.1	350	UDP-galactose 4\'-epimerase, isoform A
3L	NT_037436.4	652088	652764	-	38077	CG3402	Dmel_CG3402	NP_612045.1	123	CG3402
3L	NT_037436.4	653054	654010	-	38078	MED30	Dmel_CG17183	NP_612046.1	318	mediator complex subunit 30
3L	NT_037436.4	654442	657794	+	38079	Rev1	Dmel_CG12189	NP_612047.1	995	Rev1
3L	NT_037436.4	678000	679745	-	38080	CG17129	Dmel_CG17129	NP_612048.2	581	uncharacterized protein Dmel_CG17129, isoform A
3L	NT_037436.4	678000	679745	-	38080	CG17129	Dmel_CG17129	NP_728536.1	581	uncharacterized protein Dmel_CG17129, isoform B
3L	NT_037436.4	678000	679745	-	38080	CG17129	Dmel_CG17129	NP_728537.1	581	uncharacterized protein Dmel_CG17129, isoform C
3L	NT_037436.4	680858	681786	-	38081	CG3386	Dmel_CG3386	NP_001261217.1	288	CG3386, isoform C
3L	NT_037436.4	680858	681786	-	38081	CG3386	Dmel_CG3386	NP_001261218.1	288	CG3386, isoform D
3L	NT_037436.4	680858	681786	-	38081	CG3386	Dmel_CG3386	NP_612049.1	288	CG3386, isoform A
3L	NT_037436.4	680858	681786	-	38081	CG3386	Dmel_CG3386	NP_001261216.1	288	CG3386, isoform B
3L	NT_037436.4	683066	685147	-	38082	ebd1	Dmel_CG3371	NP_612050.1	581	earthbound 1
3L	NT_037436.4	685991	687868	-	38083	CG3344	Dmel_CG3344	NP_612051.1	446	CG3344
3L	NT_037436.4	688585	690081	-	318050	CG32483	Dmel_CG32483	NP_728540.1	439	uncharacterized protein Dmel_CG32483
3L	NT_037436.4	690620	691437	+	38084	RabX6	Dmel_CG12015	NP_001261219.1	222	RabX6, isoform B
3L	NT_037436.4	690620	691410	+	38084	RabX6	Dmel_CG12015	NP_612052.1	213	RabX6, isoform A
3L	NT_037436.4	692022	692778	-	38085	Vti1a	Dmel_CG3279	NP_612053.1	230	vesicle transport through interaction with t-SNAREs 1a
3L	NT_037436.4	693283	694869	-	38086	CG13894	Dmel_CG13894	NP_612054.1	528	uncharacterized protein Dmel_CG13894
3L	NT_037436.4	706135	707901	-	38087	CG13895	Dmel_CG13895	NP_612055.3	499	uncharacterized protein Dmel_CG13895, isoform A
3L	NT_037436.4	706135	707901	-	38087	CG13895	Dmel_CG13895	NP_001261220.1	506	uncharacterized protein Dmel_CG13895, isoform B
3L	NT_037436.4	708710	710357	-	38088	CkIIalpha-i3	Dmel_CG3217	NP_728542.1	391	CKII-alpha subunit interactor-3, isoform B
3L	NT_037436.4	708710	710283	-	38088	CkIIalpha-i3	Dmel_CG3217	NP_523875.2	387	CKII-alpha subunit interactor-3, isoform A
3L	NT_037436.4	708710	710283	-	38088	CkIIalpha-i3	Dmel_CG3217	NP_001286890.1	387	CKII-alpha subunit interactor-3, isoform C
3L	NT_037436.4	710942	711574	-	38089	CG13896	Dmel_CG13896	NP_001261221.1	210	uncharacterized protein Dmel_CG13896, isoform C
3L	NT_037436.4	710942	711574	-	38089	CG13896	Dmel_CG13896	NP_001137867.1	210	uncharacterized protein Dmel_CG13896, isoform B
3L	NT_037436.4	710942	711574	-	38089	CG13896	Dmel_CG13896	NP_612056.1	210	uncharacterized protein Dmel_CG13896, isoform A
3L	NT_037436.4	737864	755415	-	38090	hng3	Dmel_CG13897	NP_001261222.1	302	hinge3, isoform B
3L	NT_037436.4	737864	739120	-	38090	hng3	Dmel_CG13897	NP_612057.1	333	hinge3, isoform A
3L	NT_037436.4	749664	752307	+	38091	emc	Dmel_CG1007	NP_523876.2	199	extra macrochaetae
3L	NT_037436.4	803518	803973	-	38092	CG13898	Dmel_CG13898	NP_612058.1	151	uncharacterized protein Dmel_CG13898
3L	NT_037436.4	827878	832940	-	38093	CG13900	Dmel_CG13900	NP_728546.1	1227	uncharacterized protein Dmel_CG13900, isoform A
3L	NT_037436.4	830721	832940	-	38093	CG13900	Dmel_CG13900	NP_001261223.1	469	uncharacterized protein Dmel_CG13900, isoform C
3L	NT_037436.4	834177	835464	+	38094	CG42553	Dmel_CG42553	NP_612060.2	371	uncharacterized protein Dmel_CG42553
3L	NT_037436.4	835847	836553	+	8674073	CG42554	Dmel_CG42554	NP_001163314.1	213	uncharacterized protein Dmel_CG42554
3L	NT_037436.4	836783	837451	-	38095	CG13901	Dmel_CG13901	NP_612061.2	222	uncharacterized protein Dmel_CG13901, isoform A
3L	NT_037436.4	836783	837451	-	38095	CG13901	Dmel_CG13901	NP_001261224.1	222	uncharacterized protein Dmel_CG13901, isoform B
3L	NT_037436.4	838121	839432	+	38096	CG13887	Dmel_CG13887	NP_612062.1	228	uncharacterized protein Dmel_CG13887, isoform B
3L	NT_037436.4	838121	839432	+	38096	CG13887	Dmel_CG13887	NP_728548.1	228	uncharacterized protein Dmel_CG13887, isoform C
3L	NT_037436.4	838121	839153	+	38096	CG13887	Dmel_CG13887	NP_001246538.1	184	uncharacterized protein Dmel_CG13887, isoform D
3L	NT_037436.4	838121	839432	+	38096	CG13887	Dmel_CG13887	NP_001286891.1	228	uncharacterized protein Dmel_CG13887, isoform E
3L	NT_037436.4	840058	841314	-	38097	CG13902	Dmel_CG13902	NP_001261225.1	394	uncharacterized protein Dmel_CG13902, isoform C
3L	NT_037436.4	840058	841314	-	38097	CG13902	Dmel_CG13902	NP_612063.2	401	uncharacterized protein Dmel_CG13902, isoform B
3L	NT_037436.4	841718	843411	+	38098	Gr61a	Dmel_CG13888	NP_523877.1	436	gustatory receptor 61a, isoform A
3L	NT_037436.4	841718	842640	+	38098	Gr61a	Dmel_CG13888	NP_001286892.1	233	gustatory receptor 61a, isoform C
3L	NT_037436.4	841718	843411	+	38098	Gr61a	Dmel_CG13888	NP_001261226.1	436	gustatory receptor 61a, isoform B
3L	NT_037436.4	844366	851016	+	38099	cep290	Dmel_CG13889	NP_001261227.1	1978	cep290, isoform B
3L	NT_037436.4	844366	851016	+	38099	cep290	Dmel_CG13889	NP_612064.1	1978	cep290, isoform A
3L	NT_037436.4	851442	852348	+	38100	CG13890	Dmel_CG13890	NP_612065.1	262	uncharacterized protein Dmel_CG13890
3L	NT_037436.4	853281	856670	-	38101	dpr20	Dmel_CG12191	NP_612066.1	525	defective proboscis extension response 20
3L	NT_037436.4	867995	870596	+	38102	CG12502	Dmel_CG12502	NP_612067.2	738	uncharacterized protein Dmel_CG12502, isoform B
3L	NT_037436.4	867995	870596	+	38102	CG12502	Dmel_CG12502	NP_001286893.1	738	uncharacterized protein Dmel_CG12502, isoform D
3L	NT_037436.4	867995	870596	+	38102	CG12502	Dmel_CG12502	NP_001246539.1	644	uncharacterized protein Dmel_CG12502, isoform C
3L	NT_037436.4	873420	892175	+	38103	Usp10	Dmel_CG32479	NP_728554.1	1517	ubiquitin specific protease 10, isoform A
3L	NT_037436.4	873420	892175	+	38103	Usp10	Dmel_CG32479	NP_001261229.1	1517	ubiquitin specific protease 10, isoform C
3L	NT_037436.4	878453	880903	-	38104	CG13907	Dmel_CG13907	NP_001286894.1	816	uncharacterized protein Dmel_CG13907, isoform B
3L	NT_037436.4	878453	880903	-	38104	CG13907	Dmel_CG13907	NP_612069.1	816	uncharacterized protein Dmel_CG13907, isoform A
3L	NT_037436.4	888860	892175	+	38103	Usp10	Dmel_CG32479	NP_001261228.1	797	ubiquitin specific protease 10, isoform B
3L	NT_037436.4	896115	897251	+	38106	CG34056	Dmel_CG34056	NP_001033979.1	341	uncharacterized protein Dmel_CG34056
3L	NT_037436.4	897446	898667	+	3885645	CG34057	Dmel_CG34057	NP_001033981.1	344	uncharacterized protein Dmel_CG34057, isoform B
3L	NT_037436.4	897483	898667	+	3885645	CG34057	Dmel_CG34057	NP_001033980.2	355	uncharacterized protein Dmel_CG34057, isoform A
3L	NT_037436.4	902898	903614	+	38107	CG13905	Dmel_CG13905	NP_612072.2	238	uncharacterized protein Dmel_CG13905
3L	NT_037436.4	909298	910707	+	44786	nerfin-1	Dmel_CG13906	NP_524783.1	469	nervous fingers 1
3L	NT_037436.4	967517	991045	+	38109	Glut1	Dmel_CG43946	NP_612073.2	1440	glucose transporter 1, isoform P
3L	NT_037436.4	967517	991163	+	38109	Glut1	Dmel_CG43946	NP_001303403.1	622	glucose transporter 1, isoform AA
3L	NT_037436.4	967517	985735	+	38109	Glut1	Dmel_CG43946	NP_001261230.1	478	glucose transporter 1, isoform M
3L	NT_037436.4	967517	984295	+	38109	Glut1	Dmel_CG43946	NP_523878.1	481	glucose transporter 1, isoform B
3L	NT_037436.4	967517	991045	+	38109	Glut1	Dmel_CG43946	NP_001097470.2	1326	glucose transporter 1, isoform Q
3L	NT_037436.4	967517	985461	+	38109	Glut1	Dmel_CG43946	NP_001097467.1	508	glucose transporter 1, isoform D
3L	NT_037436.4	967517	984295	+	38109	Glut1	Dmel_CG43946	NP_728557.1	481	glucose transporter 1, isoform C
3L	NT_037436.4	967517	988711	+	38109	Glut1	Dmel_CG43946	NP_001261231.1	548	glucose transporter 1, isoform J
3L	NT_037436.4	967517	985461	+	38109	Glut1	Dmel_CG43946	NP_001261232.1	571	glucose transporter 1, isoform O
3L	NT_037436.4	967517	988711	+	38109	Glut1	Dmel_CG43946	NP_001286896.1	548	glucose transporter 1, isoform Z
3L	NT_037436.4	967517	988711	+	38109	Glut1	Dmel_CG43946	NP_001286895.1	662	glucose transporter 1, isoform Y
3L	NT_037436.4	967517	984295	+	38109	Glut1	Dmel_CG43946	NP_001097468.1	488	glucose transporter 1, isoform E
3L	NT_037436.4	972261	980474	+	38109	Glut1	Dmel_CG43946	NP_001261235.1	308	glucose transporter 1, isoform U
3L	NT_037436.4	972261	985461	+	38109	Glut1	Dmel_CG43946	NP_001261233.1	802	glucose transporter 1, isoform R
3L	NT_037436.4	972261	982450	+	38109	Glut1	Dmel_CG43946	NP_728558.5	647	glucose transporter 1, isoform S
3L	NT_037436.4	972261	974744	+	38109	Glut1	Dmel_CG43946	NP_001261234.1	149	glucose transporter 1, isoform T
3L	NT_037436.4	972261	988711	+	38109	Glut1	Dmel_CG43946	NP_001261238.1	784	glucose transporter 1, isoform X
3L	NT_037436.4	972261	985461	+	38109	Glut1	Dmel_CG43946	NP_001261237.1	744	glucose transporter 1, isoform W
3L	NT_037436.4	972261	984295	+	38109	Glut1	Dmel_CG43946	NP_001261236.1	717	glucose transporter 1, isoform V
3L	NT_037436.4	979794	985461	+	38109	Glut1	Dmel_CG43946	NP_001097469.2	602	glucose transporter 1, isoform L
3L	NT_037436.4	994061	995549	+	2768997	CG12038	Dmel_CG12038	NP_995949.1	407	uncharacterized protein Dmel_CG12038
3L	NT_037436.4	998085	1000401	-	43974	trio	Dmel_CG18214	NP_728563.1	398	trio, isoform E
3L	NT_037436.4	998085	1033828	-	43974	trio	Dmel_CG18214	NP_651960.2	2263	trio, isoform A
3L	NT_037436.4	998085	1007668	-	43974	trio	Dmel_CG18214	NP_728562.1	658	trio, isoform B
3L	NT_037436.4	998085	1007668	-	43974	trio	Dmel_CG18214	NP_995950.1	658	trio, isoform F
3L	NT_037436.4	998085	1019098	-	43974	trio	Dmel_CG18214	NP_728561.1	804	trio, isoform D
3L	NT_037436.4	998085	1033828	-	43974	trio	Dmel_CG18214	NP_728560.1	2263	trio, isoform C
3L	NT_037436.4	1035374	1036221	+	38113	CG9205	Dmel_CG9205	NP_728564.1	224	CG9205, isoform B
3L	NT_037436.4	1035374	1036221	+	38113	CG9205	Dmel_CG9205	NP_612075.1	224	CG9205, isoform A
3L	NT_037436.4	1038322	1100636	-	38116	bab1	Dmel_CG9097	NP_001261240.1	971	bric a brac 1, isoform D
3L	NT_037436.4	1038322	1100636	-	38116	bab1	Dmel_CG9097	NP_001261239.1	970	bric a brac 1, isoform C
3L	NT_037436.4	1038322	1100636	-	38116	bab1	Dmel_CG9097	NP_001261241.1	976	bric a brac 1, isoform E
3L	NT_037436.4	1038322	1100636	-	38116	bab1	Dmel_CG9097	NP_728565.1	977	bric a brac 1, isoform B
3L	NT_037436.4	1141968	1174497	-	44254	bab2	Dmel_CG9102	NP_523879.2	1067	bric a brac 2, isoform A
3L	NT_037436.4	1141968	1174497	-	44254	bab2	Dmel_CG9102	NP_001261242.1	1066	bric a brac 2, isoform B
3L	NT_037436.4	1189805	1190360	+	38120	CG13912	Dmel_CG13912	NP_612079.1	162	uncharacterized protein Dmel_CG13912
3L	NT_037436.4	1190816	1193090	-	38121	Trh	Dmel_CG9122	NP_612080.1	555	tryptophan hydroxylase
3L	NT_037436.4	1194867	1195295	-	38122	LysX	Dmel_CG9120	NP_523881.1	142	lysozyme X
3L	NT_037436.4	1196543	1198627	+	53472	Aplip1	Dmel_CG1200	NP_728573.1	490	APP-like protein interacting protein 1, isoform B
3L	NT_037436.4	1196543	1198627	+	53472	Aplip1	Dmel_CG1200	NP_728574.1	483	APP-like protein interacting protein 1, isoform A
3L	NT_037436.4	1201914	1202966	-	261663	CG32335	Dmel_CG32335	NP_728575.2	322	uncharacterized protein Dmel_CG32335
3L	NT_037436.4	1203403	1204639	-	38124	CG9119	Dmel_CG9119	NP_612081.1	322	CG9119
3L	NT_037436.4	1206065	1232411	+	38131	mwh	Dmel_CG43772	NP_001261244.1	1069	multiple wing hairs, isoform C
3L	NT_037436.4	1206065	1232411	+	38131	mwh	Dmel_CG43772	NP_001261243.1	1068	multiple wing hairs, isoform B
3L	NT_037436.4	1207394	1207816	+	38125	LysB	Dmel_CG1179	NP_001261245.1	140	lysozyme B, isoform B
3L	NT_037436.4	1207394	1207816	+	38125	LysB	Dmel_CG1179	NP_523882.1	140	lysozyme B, isoform A
3L	NT_037436.4	1210755	1211177	-	38127	LysD	Dmel_CG9118	NP_476823.1	140	lysozyme D
3L	NT_037436.4	1212952	1213374	+	38128	LysE	Dmel_CG1180	NP_476827.2	140	lysozyme E
3L	NT_037436.4	1218257	1218682	-	38129	LysP	Dmel_CG9116	NP_476828.1	141	lysozyme P
3L	NT_037436.4	1227772	1228194	+	38130	LysS	Dmel_CG1165	NP_476829.1	140	lysozyme S
3L	NT_037436.4	1229603	1232411	+	38131	mwh	Dmel_CG43772	NP_612082.1	836	multiple wing hairs, isoform A
3L	NT_037436.4	1232904	1233965	+	3885668	CG33965	Dmel_CG33965	NP_001033983.1	317	uncharacterized protein Dmel_CG33965
3L	NT_037436.4	1234173	1235233	+	3885642	CG33966	Dmel_CG33966	NP_001033984.1	310	uncharacterized protein Dmel_CG33966
3L	NT_037436.4	1236571	1241482	+	38133	CG9194	Dmel_CG9194	NP_612084.1	729	CG9194
3L	NT_037436.4	1237300	1238235	-	38134	CG9192	Dmel_CG9192	NP_612085.1	311	CG9192
3L	NT_037436.4	1241968	1245640	-	38135	Klp61F	Dmel_CG9191	NP_476818.1	1066	Kinesin-like protein at 61F
3L	NT_037436.4	1246073	1246633	-	2768976	CG32318	Dmel_CG32318	NP_995952.1	164	uncharacterized protein Dmel_CG32318
3L	NT_037436.4	1247066	1247674	-	38136	Psf1	Dmel_CG9187	NP_612086.1	202	Psf1
3L	NT_037436.4	1248291	1250069	+	38137	Sac1	Dmel_CG9128	NP_001189016.1	592	Sac1 phosphatase, isoform B
3L	NT_037436.4	1248291	1250069	+	38137	Sac1	Dmel_CG9128	NP_612087.1	592	Sac1 phosphatase, isoform A
3L	NT_037436.4	1250877	1251632	+	38138	CG9129	Dmel_CG9129	NP_612088.2	251	CG9129
3L	NT_037436.4	1252167	1254143	+	3772105	CG9130	Dmel_CG9130	NP_001027095.1	517	CG9130, isoform B
3L	NT_037436.4	1252167	1254143	+	3772105	CG9130	Dmel_CG9130	NP_001027096.1	517	CG9130, isoform A
3L	NT_037436.4	1254225	1255739	+	3772105	CG9130	Dmel_CG9130	NP_001027094.1	332	CG9133, isoform C
3L	NT_037436.4	1254225	1255739	+	3772105	CG9130	Dmel_CG9130	NP_001027093.1	332	CG9133, isoform B
3L	NT_037436.4	1254367	1255739	+	3772105	CG9130	Dmel_CG9130	NP_001027092.1	309	CG9133, isoform D
3L	NT_037436.4	1257162	1274204	+	38141	tfc	Dmel_CG9134	NP_612091.1	376	triforce, isoform B
3L	NT_037436.4	1266109	1274204	+	38141	tfc	Dmel_CG9134	NP_728587.1	188	triforce, isoform C
3L	NT_037436.4	1266109	1274204	+	38141	tfc	Dmel_CG9134	NP_728586.1	188	triforce, isoform A
3L	NT_037436.4	1283736	1294285	+	38142	CG32333	Dmel_CG32333	NP_001261246.1	1499	uncharacterized protein Dmel_CG32333, isoform C
3L	NT_037436.4	1283736	1288242	+	38142	CG32333	Dmel_CG32333	NP_001014555.1	236	uncharacterized protein Dmel_CG32333, isoform B
3L	NT_037436.4	1283736	1294285	+	38142	CG32333	Dmel_CG32333	NP_728588.1	1489	uncharacterized protein Dmel_CG32333, isoform A
3L	NT_037436.4	1296026	1298328	+	38144	Rabex-5	Dmel_CG9139	NP_612093.1	696	Rabaptin-5-associated exchange factor for Rab5
3L	NT_037436.4	1298726	1299833	+	38145	scf	Dmel_CG9148	NP_477392.1	329	supercoiling factor, isoform A
3L	NT_037436.4	1299137	1299833	+	38145	scf	Dmel_CG9148	NP_477393.1	192	supercoiling factor, isoform B
3L	NT_037436.4	1301768	1302346	-	38146	Rac1	Dmel_CG2248	NP_476950.1	192	Rac1, isoform A
3L	NT_037436.4	1301768	1302346	-	38146	Rac1	Dmel_CG2248	NP_001261247.1	192	Rac1, isoform B
3L	NT_037436.4	1303051	1304564	+	38147	CG9149	Dmel_CG9149	NP_612094.2	392	CG9149
3L	NT_037436.4	1305684	1307288	-	38148	CG2277	Dmel_CG2277	NP_001261248.1	534	CG2277, isoform B
3L	NT_037436.4	1305684	1307288	-	38148	CG2277	Dmel_CG2277	NP_612095.3	534	CG2277, isoform A
3L	NT_037436.4	1305684	1306991	-	38148	CG2277	Dmel_CG2277	NP_001286897.1	435	CG2277, isoform C
3L	NT_037436.4	1307700	1311708	+	38149	CG2469	Dmel_CG2469	NP_788448.1	1150	CG2469, isoform A
3L	NT_037436.4	1307700	1311708	+	38149	CG2469	Dmel_CG2469	NP_788449.1	1150	CG2469, isoform B
3L	NT_037436.4	1311930	1312912	-	38150	CG9186	Dmel_CG9186	NP_728590.1	307	CG9186, isoform A
3L	NT_037436.4	1311930	1312912	-	38150	CG9186	Dmel_CG9186	NP_612097.1	307	CG9186, isoform B
3L	NT_037436.4	1314010	1318001	+	38151	Sherpa	Dmel_CG9153	NP_001261249.1	1062	SUMO-related HECT domain and RCC repeat protein for toll pathway activation, isoform C
3L	NT_037436.4	1314010	1318001	+	38151	Sherpa	Dmel_CG9153	NP_612098.2	1058	SUMO-related HECT domain and RCC repeat protein for toll pathway activation, isoform B
3L	NT_037436.4	1314010	1318001	+	38151	Sherpa	Dmel_CG9153	NP_728591.1	1058	SUMO-related HECT domain and RCC repeat protein for toll pathway activation, isoform A
3L	NT_037436.4	1322005	1322782	-	38152	CG9184	Dmel_CG9184	NP_728593.1	242	CG9184, isoform A
3L	NT_037436.4	1322005	1322782	-	38152	CG9184	Dmel_CG9184	NP_612099.1	212	CG9184, isoform B
3L	NT_037436.4	1324571	1329415	+	38153	Myo61F	Dmel_CG9155	NP_476934.2	1052	myosin 61F, isoform D
3L	NT_037436.4	1325253	1329415	+	38153	Myo61F	Dmel_CG9155	NP_728594.2	1035	myosin 61F, isoform A
3L	NT_037436.4	1326014	1329415	+	38153	Myo61F	Dmel_CG9155	NP_728595.1	1026	myosin 61F, isoform B
3L	NT_037436.4	1326014	1329415	+	38153	Myo61F	Dmel_CG9155	NP_728596.1	1026	myosin 61F, isoform C
3L	NT_037436.4	1330141	1331459	+	38154	ND-ACP	Dmel_CG9160	NP_001261250.1	181	NADH dehydrogenase (ubiquinone) acyl carrier protein, isoform C
3L	NT_037436.4	1330141	1331459	+	38154	ND-ACP	Dmel_CG9160	NP_477003.1	152	NADH dehydrogenase (ubiquinone) acyl carrier protein, isoform A
3L	NT_037436.4	1330141	1331459	+	38154	ND-ACP	Dmel_CG9160	NP_477002.1	143	NADH dehydrogenase (ubiquinone) acyl carrier protein, isoform B
3L	NT_037436.4	1331782	1332253	+	38155	msd1	Dmel_CG13914	NP_612100.2	138	mitotic spindle density 1
3L	NT_037436.4	1332352	1333113	-	38156	msd5	Dmel_CG2213	NP_612101.1	253	mitotic spindle density 5
3L	NT_037436.4	1333417	1334521	-	38157	CG2211	Dmel_CG2211	NP_001261251.1	330	CG2211, isoform B
3L	NT_037436.4	1333417	1334521	-	38157	CG2211	Dmel_CG2211	NP_612102.2	330	CG2211, isoform A
3L	NT_037436.4	1335241	1339170	+	46140	l(3)02640	Dmel_CG9165	NP_612103.1	652	lethal (3) 02640
3L	NT_037436.4	1339822	1342391	-	38159	CG2199	Dmel_CG2199	NP_728599.1	733	CG2199, isoform B
3L	NT_037436.4	1339822	1342062	-	38159	CG2199	Dmel_CG2199	NP_001261252.1	724	CG2199, isoform C
3L	NT_037436.4	1339822	1342062	-	38159	CG2199	Dmel_CG2199	NP_612104.1	724	CG2199, isoform A
3L	NT_037436.4	1342597	1424880	-	38160	Ptp61F	Dmel_CG9181	NP_728600.1	530	protein tyrosine phosphatase 61F, isoform C
3L	NT_037436.4	1342597	1350476	-	38160	Ptp61F	Dmel_CG9181	NP_476688.1	535	protein tyrosine phosphatase 61F, isoform B
3L	NT_037436.4	1344328	1346133	-	38160	Ptp61F	Dmel_CG9181	NP_001261253.1	431	protein tyrosine phosphatase 61F, isoform E
3L	NT_037436.4	1344328	1350476	-	38160	Ptp61F	Dmel_CG9181	NP_476687.1	548	protein tyrosine phosphatase 61F, isoform A
3L	NT_037436.4	1344328	1346133	-	38160	Ptp61F	Dmel_CG9181	NP_728601.1	431	protein tyrosine phosphatase 61F, isoform D
3L	NT_037436.4	1351186	1352031	+	38161	312	Dmel_CG9166	NP_612105.1	241	312, isoform A
3L	NT_037436.4	1351186	1352031	+	38161	312	Dmel_CG9166	NP_001261254.1	241	312, isoform B
3L	NT_037436.4	1384517	1386985	+	44856	ru	Dmel_CG1214	NP_524790.1	341	roughoid
3L	NT_037436.4	1398604	1401343	+	317977	CG32320	Dmel_CG32320	NP_001097472.3	767	uncharacterized protein Dmel_CG32320
3L	NT_037436.4	1411226	1413078	+	38163	CG9168	Dmel_CG9168	NP_612106.1	600	CG9168
3L	NT_037436.4	1416462	1417861	+	38164	FucTD	Dmel_CG9169	NP_612107.1	447	FucTD
3L	NT_037436.4	1422061	1423362	-	38165	CG9173	Dmel_CG9173	NP_612108.1	433	CG9173
3L	NT_037436.4	1434404	1437643	-	38167	SA-2	Dmel_CG13916	NP_612109.3	973	Stromalin-2
3L	NT_037436.4	1465487	1467353	+	38168	rho	Dmel_CG1004	NP_001261255.1	355	rhomboid, isoform B
3L	NT_037436.4	1465487	1467353	+	38168	rho	Dmel_CG1004	NP_523883.2	355	rhomboid, isoform A
3L	NT_037436.4	1471370	1472005	-	317976	CG32319	Dmel_CG32319	NP_728606.1	211	uncharacterized protein Dmel_CG32319
3L	NT_037436.4	1476173	1488416	-	38169	stet	Dmel_CG33166	NP_788450.1	485	stem cell tumor, isoform B
3L	NT_037436.4	1476173	1477287	-	38169	stet	Dmel_CG33166	NP_788451.1	330	stem cell tumor, isoform A
3L	NT_037436.4	1477721	1478035	+	38170	robl62A	Dmel_CG1014	NP_612110.1	104	robl62A, isoform A
3L	NT_037436.4	1477721	1478035	+	38170	robl62A	Dmel_CG1014	NP_001261256.1	104	robl62A, isoform B
3L	NT_037436.4	1491754	1494890	-	192509	CG12084	Dmel_CG12084	NP_612112.1	793	uncharacterized protein Dmel_CG12084, isoform A
3L	NT_037436.4	1491754	1494890	-	192509	CG12084	Dmel_CG12084	NP_001261257.1	765	uncharacterized protein Dmel_CG12084, isoform B
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163315.1	545	half pint, isoform E
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_728612.1	545	half pint, isoform D
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163317.1	545	half pint, isoform G
3L	NT_037436.4	1497213	1502469	-	38173	hfp	Dmel_CG12085	NP_525123.2	637	half pint, isoform A
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163316.1	545	half pint, isoform F
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_728611.1	545	half pint, isoform C
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163318.1	545	half pint, isoform H
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163320.1	545	half pint, isoform J
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_728610.1	545	half pint, isoform B
3L	NT_037436.4	1497213	1499158	-	38173	hfp	Dmel_CG12085	NP_001163319.1	545	half pint, isoform I
3L	NT_037436.4	1503827	1517006	-	38174	cue	Dmel_CG12086	NP_612113.2	644	cueball
3L	NT_037436.4	1517692	1522919	+	38175	Psa	Dmel_CG1009	NP_728615.1	1053	puromycin sensitive aminopeptidase, isoform E
3L	NT_037436.4	1517692	1522919	+	38175	Psa	Dmel_CG1009	NP_728614.1	1075	puromycin sensitive aminopeptidase, isoform C
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_001246546.1	866	puromycin sensitive aminopeptidase, isoform H
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_728618.1	866	puromycin sensitive aminopeptidase, isoform F
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_001261258.1	866	puromycin sensitive aminopeptidase, isoform I
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_728616.1	866	puromycin sensitive aminopeptidase, isoform A
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_728617.1	866	puromycin sensitive aminopeptidase, isoform D
3L	NT_037436.4	1518674	1522919	+	38175	Psa	Dmel_CG1009	NP_647617.2	866	puromycin sensitive aminopeptidase, isoform B
3L	NT_037436.4	1523514	1533908	-	38176	Iml1	Dmel_CG12090	NP_728621.1	1544	increased minichromosome loss 1, isoform A
3L	NT_037436.4	1523514	1533908	-	38176	Iml1	Dmel_CG12090	NP_728620.1	1472	increased minichromosome loss 1, isoform C
3L	NT_037436.4	1523514	1533908	-	38176	Iml1	Dmel_CG12090	NP_001261260.1	1503	increased minichromosome loss 1, isoform E
3L	NT_037436.4	1523514	1533908	-	38176	Iml1	Dmel_CG12090	NP_647618.1	1471	increased minichromosome loss 1, isoform B
3L	NT_037436.4	1523514	1533908	-	38176	Iml1	Dmel_CG12090	NP_001261259.1	1511	increased minichromosome loss 1, isoform D
3L	NT_037436.4	1529439	1531259	-	3885628	Ir62a	Dmel_CG33971	NP_001033986.1	606	ionotropic receptor 62a
3L	NT_037436.4	1535596	1536561	-	38177	CG12091	Dmel_CG12091	NP_001261261.1	321	uncharacterized protein Dmel_CG12091, isoform B
3L	NT_037436.4	1535596	1536561	-	38177	CG12091	Dmel_CG12091	NP_647619.1	321	uncharacterized protein Dmel_CG12091, isoform A
3L	NT_037436.4	1537710	1541508	+	38178	pns	Dmel_CG7852	NP_995954.1	817	pinstripe, isoform C
3L	NT_037436.4	1537710	1544075	+	38178	pns	Dmel_CG7852	NP_728624.1	1449	pinstripe, isoform B
3L	NT_037436.4	1537710	1544075	+	38178	pns	Dmel_CG7852	NP_647620.1	1449	pinstripe, isoform A
3L	NT_037436.4	1544965	1545694	-	317973	CG32313	Dmel_CG32313	NP_001261262.1	182	uncharacterized protein Dmel_CG32313, isoform B
3L	NT_037436.4	1544965	1545694	-	317973	CG32313	Dmel_CG32313	NP_728625.2	181	uncharacterized protein Dmel_CG32313, isoform A
3L	NT_037436.4	1545399	1545694	-	317973	CG32313	Dmel_CG32313	NP_001261263.1	65	uncharacterized protein Dmel_CG32313, isoform C
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_001286898.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform F
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_001261264.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform E
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_728628.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform D
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_728627.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform C
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_728626.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform B
3L	NT_037436.4	1550794	1552626	+	117353	Cct1	Dmel_CG1049	NP_647621.1	526	CTP:phosphocholine cytidylyltransferase 1, isoform A
3L	NT_037436.4	1553897	1555168	+	38180	Cct2	Dmel_CG18330	NP_647622.1	381	CTP:phosphocholine cytidylyltransferase 2
3L	NT_037436.4	1555569	1557882	-	38181	CG12099	Dmel_CG12099	NP_728629.1	708	uncharacterized protein Dmel_CG12099, isoform A
3L	NT_037436.4	1555569	1557882	-	38181	CG12099	Dmel_CG12099	NP_647623.1	708	uncharacterized protein Dmel_CG12099, isoform B
3L	NT_037436.4	1558832	1559785	+	38182	Pex10	Dmel_CG7864	NP_001261265.1	299	peroxin 10, isoform B
3L	NT_037436.4	1558832	1559785	+	38182	Pex10	Dmel_CG7864	NP_647624.1	299	peroxin 10, isoform A
3L	NT_037436.4	1560183	1564108	-	38184	CG7879	Dmel_CG7879	NP_647626.1	985	CG7879, isoform A
3L	NT_037436.4	1560183	1564108	-	38184	CG7879	Dmel_CG7879	NP_728631.1	985	CG7879, isoform B
3L	NT_037436.4	1565553	1567527	+	38183	CG12003	Dmel_CG12003	NP_647625.2	456	uncharacterized protein Dmel_CG12003
3L	NT_037436.4	1571987	1574028	+	38185	CG12004	Dmel_CG12004	NP_647627.1	403	uncharacterized protein Dmel_CG12004, isoform A
3L	NT_037436.4	1571987	1574028	+	38185	CG12004	Dmel_CG12004	NP_728633.1	403	uncharacterized protein Dmel_CG12004, isoform B
3L	NT_037436.4	1571987	1575271	+	38185	CG12004	Dmel_CG12004	NP_001286899.1	486	uncharacterized protein Dmel_CG12004, isoform D
3L	NT_037436.4	1571987	1575271	+	38185	CG12004	Dmel_CG12004	NP_001097474.1	486	uncharacterized protein Dmel_CG12004, isoform C
3L	NT_037436.4	1593670	1599861	+	38186	CG13917	Dmel_CG13917	NP_001261266.1	2019	uncharacterized protein Dmel_CG13917, isoform C
3L	NT_037436.4	1593670	1599861	+	38186	CG13917	Dmel_CG13917	NP_001189017.1	2019	uncharacterized protein Dmel_CG13917, isoform B
3L	NT_037436.4	1593670	1599861	+	38186	CG13917	Dmel_CG13917	NP_001303399.1	2019	uncharacterized protein Dmel_CG13917, isoform D
3L	NT_037436.4	1593670	1599861	+	38186	CG13917	Dmel_CG13917	NP_647628.1	2019	uncharacterized protein Dmel_CG13917, isoform A
3L	NT_037436.4	1601268	1602012	-	38187	CG12104	Dmel_CG12104	NP_001286900.1	226	uncharacterized protein Dmel_CG12104, isoform C
3L	NT_037436.4	1601268	1602571	-	38187	CG12104	Dmel_CG12104	NP_001261267.1	250	uncharacterized protein Dmel_CG12104, isoform B
3L	NT_037436.4	1601268	1602571	-	38187	CG12104	Dmel_CG12104	NP_647629.1	250	uncharacterized protein Dmel_CG12104, isoform A
3L	NT_037436.4	1603031	1604633	+	3772196	CG18170	Dmel_CG18170	NP_001027097.1	495	uncharacterized protein Dmel_CG18170, isoform B
3L	NT_037436.4	1603031	1604633	+	3772196	CG18170	Dmel_CG18170	NP_001027098.1	495	uncharacterized protein Dmel_CG18170, isoform A
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001163322.1	1241	uncharacterized protein Dmel_CG33791, isoform F
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001163321.1	1241	uncharacterized protein Dmel_CG33791, isoform E
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001027102.1	1282	uncharacterized protein Dmel_CG33791, isoform D
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001027099.1	1238	uncharacterized protein Dmel_CG33791, isoform C
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001027101.1	1238	uncharacterized protein Dmel_CG33791, isoform A
3L	NT_037436.4	1604829	1617301	+	3772196	CG18170	Dmel_CG18170	NP_001027100.1	1282	uncharacterized protein Dmel_CG33791, isoform B
3L	NT_037436.4	1611046	1614510	-	38190	CG12105	Dmel_CG12105	NP_001261268.1	1154	uncharacterized protein Dmel_CG12105, isoform B
3L	NT_037436.4	1611046	1615575	-	38190	CG12105	Dmel_CG12105	NP_647632.2	1509	uncharacterized protein Dmel_CG12105, isoform A
3L	NT_037436.4	1617424	1618102	-	38192	CG13926	Dmel_CG13926	NP_647633.1	197	uncharacterized protein Dmel_CG13926
3L	NT_037436.4	1618501	1622989	+	38193	ABCB7	Dmel_CG7955	NP_728642.2	743	ATP binding cassette subfamily B member 7, isoform A
3L	NT_037436.4	1618501	1622989	+	38193	ABCB7	Dmel_CG7955	NP_728643.2	709	ATP binding cassette subfamily B member 7, isoform B
3L	NT_037436.4	1618918	1620258	+	2768998	CG33230	Dmel_CG33230	NP_995955.1	446	uncharacterized protein Dmel_CG33230
3L	NT_037436.4	1623513	1625661	-	38194	GC	Dmel_CG13927	NP_523885.2	672	gamma-glutamyl carboxylase, isoform A
3L	NT_037436.4	1623513	1625661	-	38194	GC	Dmel_CG13927	NP_001163323.1	672	gamma-glutamyl carboxylase, isoform B
3L	NT_037436.4	1627212	1627949	-	38195	CG13928	Dmel_CG13928	NP_647635.1	245	uncharacterized protein Dmel_CG13928
3L	NT_037436.4	1632267	1636819	-	38196	nSyb	Dmel_CG17248	NP_728644.1	183	neuronal synaptobrevin, isoform F
3L	NT_037436.4	1632267	1635965	-	38196	nSyb	Dmel_CG17248	NP_995956.1	192	neuronal synaptobrevin, isoform E
3L	NT_037436.4	1632267	1635965	-	38196	nSyb	Dmel_CG17248	NP_728645.1	192	neuronal synaptobrevin, isoform G
3L	NT_037436.4	1632267	1636819	-	38196	nSyb	Dmel_CG17248	NP_477058.1	183	neuronal synaptobrevin, isoform A
3L	NT_037436.4	1633249	1636819	-	38196	nSyb	Dmel_CG17248	NP_001261269.1	206	neuronal synaptobrevin, isoform J
3L	NT_037436.4	1633790	1635965	-	38196	nSyb	Dmel_CG17248	NP_001246547.1	135	neuronal synaptobrevin, isoform I
3L	NT_037436.4	1633790	1635965	-	38196	nSyb	Dmel_CG17248	NP_728646.2	135	neuronal synaptobrevin, isoform H
3L	NT_037436.4	1634894	1636819	-	38196	nSyb	Dmel_CG17248	NP_001261270.1	125	neuronal synaptobrevin, isoform K
3L	NT_037436.4	1638041	1639136	-	38197	metl	Dmel_CG13929	NP_728647.2	302	methyltransferase-like, isoform A
3L	NT_037436.4	1638041	1639072	-	38197	metl	Dmel_CG13929	NP_647636.3	325	methyltransferase-like, isoform B
3L	NT_037436.4	1639995	1640636	+	38198	Bgb	Dmel_CG7959	NP_477065.3	213	Big brother, isoform A
3L	NT_037436.4	1639995	1640756	+	38198	Bgb	Dmel_CG7959	NP_001261271.1	253	Big brother, isoform B
3L	NT_037436.4	1641197	1644957	-	38199	alphaCOP	Dmel_CG7961	NP_477395.1	1234	coat protein (coatomer) alpha, isoform A
3L	NT_037436.4	1641197	1644957	-	38199	alphaCOP	Dmel_CG7961	NP_728648.1	1234	coat protein (coatomer) alpha, isoform B
3L	NT_037436.4	1645542	1645937	+	38200	CG13919	Dmel_CG13919	NP_647637.1	131	uncharacterized protein Dmel_CG13919
3L	NT_037436.4	1645982	1647400	-	38201	CG17249	Dmel_CG17249	NP_647638.1	472	uncharacterized protein Dmel_CG17249
3L	NT_037436.4	1647905	1648546	+	38202	Bro	Dmel_CG7960	NP_477066.2	213	brother
3L	NT_037436.4	1649385	1651133	+	38203	CG13920	Dmel_CG13920	NP_001286902.1	160	uncharacterized protein Dmel_CG13920, isoform C
3L	NT_037436.4	1649385	1651133	+	38203	CG13920	Dmel_CG13920	NP_647639.1	160	uncharacterized protein Dmel_CG13920, isoform A
3L	NT_037436.4	1651637	1652799	-	38204	Vta1	Dmel_CG7967	NP_647640.1	316	vesicle trafficking 1
3L	NT_037436.4	1652876	1653862	+	38205	CG7970	Dmel_CG7970	NP_001303378.1	255	CG7970, isoform C
3L	NT_037436.4	1653166	1653862	+	38205	CG7970	Dmel_CG7970	NP_647641.1	191	CG7970, isoform A
3L	NT_037436.4	1653166	1653862	+	38205	CG7970	Dmel_CG7970	NP_001261272.1	191	CG7970, isoform B
3L	NT_037436.4	1654561	1664770	-	38206	CG7971	Dmel_CG7971	NP_728652.1	1107	CG7971, isoform C
3L	NT_037436.4	1654561	1664770	-	38206	CG7971	Dmel_CG7971	NP_001097475.2	1655	CG7971, isoform F
3L	NT_037436.4	1655121	1664770	-	38206	CG7971	Dmel_CG7971	NP_001246548.1	1062	CG7971, isoform G
3L	NT_037436.4	1655121	1664770	-	38206	CG7971	Dmel_CG7971	NP_647642.2	1062	CG7971, isoform A
3L	NT_037436.4	1660806	1663969	-	38206	CG7971	Dmel_CG7971	NP_001286903.1	174	CG7971, isoform H
3L	NT_037436.4	1661105	1663969	-	38206	CG7971	Dmel_CG7971	NP_728653.2	158	CG7971, isoform B
3L	NT_037436.4	1665251	1666244	+	38207	CG7974	Dmel_CG7974	NP_001261273.1	294	CG7974, isoform B
3L	NT_037436.4	1665251	1666244	+	38207	CG7974	Dmel_CG7974	NP_647643.1	294	CG7974, isoform A
3L	NT_037436.4	1667346	1668626	-	38208	RpL23A	Dmel_CG7977	NP_523886.1	277	ribosomal protein L23A
3L	NT_037436.4	1668965	1670084	-	38209	RabX5	Dmel_CG7980	NP_647644.2	277	RabX5
3L	NT_037436.4	1670472	1672705	-	38210	CG13930	Dmel_CG13930	NP_647645.1	685	uncharacterized protein Dmel_CG13930
3L	NT_037436.4	1675122	1714894	+	38214	CG7991	Dmel_CG7991	NP_647649.2	888	CG7991, isoform B
3L	NT_037436.4	1694642	1696300	+	38211	CG12011	Dmel_CG12011	NP_647646.1	528	uncharacterized protein Dmel_CG12011
3L	NT_037436.4	1701395	1702302	-	38212	CG13931	Dmel_CG13931	NP_001261274.1	172	uncharacterized protein Dmel_CG13931, isoform B
3L	NT_037436.4	1701395	1702302	-	38212	CG13931	Dmel_CG13931	NP_647647.2	172	uncharacterized protein Dmel_CG13931, isoform A
3L	NT_037436.4	1713068	1714894	+	38214	CG7991	Dmel_CG7991	NP_001189018.1	608	CG7991, isoform C
3L	NT_037436.4	1716300	1724092	-	38218	drpr	Dmel_CG2086	NP_477450.1	594	draper, isoform A
3L	NT_037436.4	1716300	1724092	-	38218	drpr	Dmel_CG2086	NP_728660.2	1031	draper, isoform B
3L	NT_037436.4	1716300	1724092	-	38218	drpr	Dmel_CG2086	NP_001261276.1	1042	draper, isoform E
3L	NT_037436.4	1716300	1724092	-	38218	drpr	Dmel_CG2086	NP_001261275.1	613	draper, isoform D
3L	NT_037436.4	1716705	1724092	-	38218	drpr	Dmel_CG2086	NP_001261277.1	976	draper, isoform F
3L	NT_037436.4	1716705	1724092	-	38218	drpr	Dmel_CG2086	NP_001246549.1	528	draper, isoform C
3L	NT_037436.4	1720743	1723025	-	38216	CG18171	Dmel_CG18171	NP_647651.1	760	uncharacterized protein Dmel_CG18171
3L	NT_037436.4	1724561	1725463	+	38217	CG12035	Dmel_CG12035	NP_647652.1	300	uncharacterized protein Dmel_CG12035
3L	NT_037436.4	1731328	1735589	-	38219	Oseg4	Dmel_CG2069	NP_001261278.1	1205	outer segment 4, isoform B
3L	NT_037436.4	1731328	1735589	-	38219	Oseg4	Dmel_CG2069	NP_647653.1	1205	outer segment 4, isoform A
3L	NT_037436.4	1736231	1737799	-	38220	CG18173	Dmel_CG18173	NP_001261279.1	504	uncharacterized protein Dmel_CG18173, isoform B
3L	NT_037436.4	1736231	1737799	-	38220	CG18173	Dmel_CG18173	NP_647654.1	504	uncharacterized protein Dmel_CG18173, isoform A
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_728667.1	576	glycerol kinase 2, isoform E
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_001286904.1	576	glycerol kinase 2, isoform F
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_728664.1	576	glycerol kinase 2, isoform B
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_647655.1	576	glycerol kinase 2, isoform A
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_728666.1	576	glycerol kinase 2, isoform D
3L	NT_037436.4	1743213	1745012	+	38221	Gk2	Dmel_CG7995	NP_728665.1	576	glycerol kinase 2, isoform C
3L	NT_037436.4	1747234	1751807	+	38222	CG13921	Dmel_CG13921	NP_647656.2	1119	uncharacterized protein Dmel_CG13921, isoform D
3L	NT_037436.4	1747234	1751807	+	38222	CG13921	Dmel_CG13921	NP_995957.1	1120	uncharacterized protein Dmel_CG13921, isoform B
3L	NT_037436.4	1748999	1751807	+	38222	CG13921	Dmel_CG13921	NP_001261281.1	872	uncharacterized protein Dmel_CG13921, isoform F
3L	NT_037436.4	1748999	1751807	+	38222	CG13921	Dmel_CG13921	NP_001261280.1	872	uncharacterized protein Dmel_CG13921, isoform E
3L	NT_037436.4	1748999	1751807	+	38222	CG13921	Dmel_CG13921	NP_001189019.1	873	uncharacterized protein Dmel_CG13921, isoform C
3L	NT_037436.4	1752633	1754342	-	38223	Cht2	Dmel_CG2054	NP_001261282.1	484	chitinase 2, isoform C
3L	NT_037436.4	1752633	1754342	-	38223	Cht2	Dmel_CG2054	NP_477298.2	484	chitinase 2, isoform A
3L	NT_037436.4	1752633	1754342	-	38223	Cht2	Dmel_CG2054	NP_001246550.1	484	chitinase 2, isoform B
3L	NT_037436.4	1756427	1759036	+	38224	CG8001	Dmel_CG8001	NP_001261283.1	748	CG8001, isoform C
3L	NT_037436.4	1756427	1759036	+	38224	CG8001	Dmel_CG8001	NP_647657.1	748	CG8001, isoform A
3L	NT_037436.4	1756427	1759036	+	38224	CG8001	Dmel_CG8001	NP_001163324.1	743	CG8001, isoform B
3L	NT_037436.4	1756427	1759036	+	38224	CG8001	Dmel_CG8001	NP_001261284.1	743	CG8001, isoform D
3L	NT_037436.4	1759259	1771650	-	38226	Dhc62B	Dmel_CG15804	NP_995958.2	3964	dynein heavy chain at 62B
3L	NT_037436.4	1772602	1774791	-	38227	CG13933	Dmel_CG13933	NP_001261285.1	670	uncharacterized protein Dmel_CG13933, isoform B
3L	NT_037436.4	1772602	1774791	-	38227	CG13933	Dmel_CG13933	NP_647658.1	671	uncharacterized protein Dmel_CG13933, isoform A
3L	NT_037436.4	1775681	1776976	+	38228	CG12018	Dmel_CG12018	NP_647659.1	431	uncharacterized protein Dmel_CG12018
3L	NT_037436.4	1777043	1777330	-	38229	CG2021	Dmel_CG2021	NP_647660.1	95	CG2021
3L	NT_037436.4	1777516	1778292	+	38230	mRpL46	Dmel_CG13922	NP_647661.1	258	mitochondrial ribosomal protein L46
3L	NT_037436.4	1779182	1788896	-	38231	alpha-Spec	Dmel_CG1977	NP_001261286.1	2457	alpha spectrin, isoform B
3L	NT_037436.4	1779182	1788896	-	38231	alpha-Spec	Dmel_CG1977	NP_476739.1	2415	alpha spectrin, isoform A
3L	NT_037436.4	1779182	1788896	-	38231	alpha-Spec	Dmel_CG1977	NP_001261287.1	2447	alpha spectrin, isoform C
3L	NT_037436.4	1779182	1788896	-	38231	alpha-Spec	Dmel_CG1977	NP_001261288.1	2425	alpha spectrin, isoform D
3L	NT_037436.4	1789693	1793415	-	46719	dlt	Dmel_CG32315	NP_728672.1	1240	discs lost
3L	NT_037436.4	1795700	1797174	+	38232	Cdc37	Dmel_CG12019	NP_477006.1	389	Cdc37
3L	NT_037436.4	1797365	1798529	+	38233	CG12020	Dmel_CG12020	NP_647662.1	366	uncharacterized protein Dmel_CG12020
3L	NT_037436.4	1799149	1801824	+	44100	Patj	Dmel_CG12021	NP_477342.1	871	patj, isoform C
3L	NT_037436.4	1799149	1801824	+	44100	Patj	Dmel_CG12021	NP_728674.1	871	patj, isoform B
3L	NT_037436.4	1799149	1801824	+	44100	Patj	Dmel_CG12021	NP_599144.1	871	patj, isoform A
3L	NT_037436.4	1802235	1802693	-	38235	JTBR	Dmel_CG1935	NP_477403.1	152	JTBR, isoform A
3L	NT_037436.4	1802235	1802693	-	38235	JTBR	Dmel_CG1935	NP_001261290.1	152	JTBR, isoform C
3L	NT_037436.4	1802235	1802693	-	38235	JTBR	Dmel_CG1935	NP_001261289.1	152	JTBR, isoform B
3L	NT_037436.4	1803210	1806639	+	2768999	CG42676	Dmel_CG42676	NP_001286905.1	427	uncharacterized protein Dmel_CG42676, isoform F
3L	NT_037436.4	1803210	1803575	+	2768999	CG42676	Dmel_CG42676	NP_001261291.1	86	uncharacterized protein Dmel_CG42676, isoform E
3L	NT_037436.4	1803210	1806639	+	2768999	CG42676	Dmel_CG42676	NP_995960.2	427	uncharacterized protein Dmel_CG42676, isoform D
3L	NT_037436.4	1803210	1804832	+	2768999	CG42676	Dmel_CG42676	NP_001189020.1	409	uncharacterized protein Dmel_CG42676, isoform C
3L	NT_037436.4	1812682	1822140	+	38238	GV1	Dmel_CG12023	NP_728678.1	180	GV1, isoform B
3L	NT_037436.4	1812682	1822774	+	38238	GV1	Dmel_CG12023	NP_647665.2	293	GV1, isoform A
3L	NT_037436.4	1824420	1825180	-	38239	Cpr62Ba	Dmel_CG13934	NP_001137868.1	136	cuticular protein 62Ba, isoform C
3L	NT_037436.4	1824420	1825180	-	38239	Cpr62Ba	Dmel_CG13934	NP_647666.2	136	cuticular protein 62Ba, isoform B
3L	NT_037436.4	1832837	1834958	-	38240	Cpr62Bb	Dmel_CG13935	NP_647667.1	194	cuticular protein 62Bb, isoform A
3L	NT_037436.4	1832837	1834958	-	38240	Cpr62Bb	Dmel_CG13935	NP_001137869.1	194	cuticular protein 62Bb, isoform B
3L	NT_037436.4	1832837	1834958	-	38240	Cpr62Bb	Dmel_CG13935	NP_001261292.1	194	cuticular protein 62Bb, isoform C
3L	NT_037436.4	1840792	1842004	-	38241	Cpr62Bc	Dmel_CG1919	NP_001261293.1	180	cuticular protein 62Bc, isoform B
3L	NT_037436.4	1840792	1842004	-	38241	Cpr62Bc	Dmel_CG1919	NP_647668.1	180	cuticular protein 62Bc, isoform A
3L	NT_037436.4	1851348	1852240	-	38242	CNMa	Dmel_CG13936	NP_001261294.1	189	CNMamide, isoform D
3L	NT_037436.4	1851348	1852240	-	38242	CNMa	Dmel_CG13936	NP_001189021.1	193	CNMamide, isoform C
3L	NT_037436.4	1851348	1852240	-	38242	CNMa	Dmel_CG13936	NP_647669.2	193	CNMamide, isoform B
3L	NT_037436.4	1857245	1858184	+	38243	CG12024	Dmel_CG12024	NP_728683.1	276	uncharacterized protein Dmel_CG12024, isoform B
3L	NT_037436.4	1857245	1858184	+	38243	CG12024	Dmel_CG12024	NP_001189022.1	277	uncharacterized protein Dmel_CG12024, isoform C
3L	NT_037436.4	1857245	1858184	+	38243	CG12024	Dmel_CG12024	NP_647670.3	292	uncharacterized protein Dmel_CG12024, isoform A
3L	NT_037436.4	1860657	1861211	-	38244	Rap1	Dmel_CG1956	NP_001261295.1	184	Rap1 GTPase, isoform C
3L	NT_037436.4	1860657	1861211	-	38244	Rap1	Dmel_CG1956	NP_476857.1	184	Rap1 GTPase, isoform A
3L	NT_037436.4	1860657	1861211	-	38244	Rap1	Dmel_CG1956	NP_001189023.1	184	Rap1 GTPase, isoform B
3L	NT_037436.4	1863033	1865045	-	117365	HBS1	Dmel_CG1898	NP_652729.2	670	HBS1, isoform A
3L	NT_037436.4	1863033	1865045	-	117365	HBS1	Dmel_CG1898	NP_001286906.1	670	HBS1, isoform B
3L	NT_037436.4	1865757	1867492	+	38246	CG12025	Dmel_CG12025	NP_647671.1	170	uncharacterized protein Dmel_CG12025, isoform A
3L	NT_037436.4	1865757	1867492	+	38246	CG12025	Dmel_CG12025	NP_001286907.1	170	uncharacterized protein Dmel_CG12025, isoform C
3L	NT_037436.4	1865757	1867492	+	38246	CG12025	Dmel_CG12025	NP_001261296.1	170	uncharacterized protein Dmel_CG12025, isoform B
3L	NT_037436.4	1870019	1871564	+	38247	CG13924	Dmel_CG13924	NP_001189024.1	494	uncharacterized protein Dmel_CG13924, isoform C
3L	NT_037436.4	1870119	1871564	+	38247	CG13924	Dmel_CG13924	NP_647672.2	481	uncharacterized protein Dmel_CG13924, isoform B
3L	NT_037436.4	1871761	1876178	-	38248	dre4	Dmel_CG1828	NP_728686.2	1083	dre4, isoform B
3L	NT_037436.4	1871761	1876178	-	38248	dre4	Dmel_CG1828	NP_476610.2	1122	dre4, isoform A
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_001261297.1	426	uncharacterized protein Dmel_CG13937, isoform H
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_728688.2	431	uncharacterized protein Dmel_CG13937, isoform G
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_728689.2	431	uncharacterized protein Dmel_CG13937, isoform F
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_001261298.1	363	uncharacterized protein Dmel_CG13937, isoform I
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_647673.2	363	uncharacterized protein Dmel_CG13937, isoform D
3L	NT_037436.4	1876688	1881272	-	38249	CG13937	Dmel_CG13937	NP_001163325.1	363	uncharacterized protein Dmel_CG13937, isoform E
3L	NT_037436.4	1884033	1884785	-	48224	Aprt	Dmel_CG18315	NP_476637.1	182	adenine phosphoribosyltransferase, isoform A
3L	NT_037436.4	1884033	1884785	-	48224	Aprt	Dmel_CG18315	NP_001286908.1	182	adenine phosphoribosyltransferase, isoform C
3L	NT_037436.4	1884033	1884785	-	48224	Aprt	Dmel_CG18315	NP_001286909.1	182	adenine phosphoribosyltransferase, isoform D
3L	NT_037436.4	1889807	1891070	+	38251	Tmhs	Dmel_CG12026	NP_728691.1	265	tetraspan membrane protein in hair cell stereocilia, isoform B
3L	NT_037436.4	1889807	1891070	+	38251	Tmhs	Dmel_CG12026	NP_647674.1	265	tetraspan membrane protein in hair cell stereocilia, isoform A
3L	NT_037436.4	1893880	1902697	-	38252	dsb	Dmel_CG1887	NP_001097477.1	615	debris buster, isoform D
3L	NT_037436.4	1893880	1896967	-	38252	dsb	Dmel_CG1887	NP_647675.3	517	debris buster, isoform F
3L	NT_037436.4	1902404	1902697	-	38252	dsb	Dmel_CG1887	NP_001261299.1	97	debris buster, isoform G
3L	NT_037436.4	1921415	1933448	+	38254	Dbx	Dmel_CG42234	NP_647677.2	741	Dbx
3L	NT_037436.4	1933932	1936280	-	38255	CG5687	Dmel_CG5687	NP_647678.3	683	CG5687, isoform A
3L	NT_037436.4	1933932	1936280	-	38255	CG5687	Dmel_CG5687	NP_001286910.1	683	CG5687, isoform B
3L	NT_037436.4	1941176	1942735	+	38256	Mfap1	Dmel_CG1017	NP_647679.1	478	Microfibril-associated protein 1
3L	NT_037436.4	1942982	1947449	-	38257	mu2	Dmel_CG1960	NP_001163326.1	1274	mutator 2, isoform C
3L	NT_037436.4	1942982	1947449	-	38257	mu2	Dmel_CG1960	NP_523887.2	1280	mutator 2, isoform A
3L	NT_037436.4	1942982	1947449	-	38257	mu2	Dmel_CG1960	NP_728695.1	1259	mutator 2, isoform B
3L	NT_037436.4	1947860	1950113	+	38258	Cnb	Dmel_CG5690	NP_001261300.1	689	centrobin, isoform B
3L	NT_037436.4	1947860	1950113	+	38258	Cnb	Dmel_CG5690	NP_647680.1	689	centrobin, isoform A
3L	NT_037436.4	1950579	1962913	-	38259	mv	Dmel_CG42863	NP_647681.2	3535	mauve
3L	NT_037436.4	1963474	1966679	+	38261	SCOT	Dmel_CG1140	NP_728699.1	502	Succinyl-CoA:3-ketoacid CoA transferase, isoform B
3L	NT_037436.4	1964550	1966679	+	38261	SCOT	Dmel_CG1140	NP_647683.1	516	Succinyl-CoA:3-ketoacid CoA transferase, isoform A
3L	NT_037436.4	1965213	1966679	+	38261	SCOT	Dmel_CG1140	NP_001261301.1	450	Succinyl-CoA:3-ketoacid CoA transferase, isoform C
3L	NT_037436.4	1966819	1969617	-	38262	CG1927	Dmel_CG1927	NP_647684.1	213	CG1927, isoform A
3L	NT_037436.4	1966819	1968086	-	38262	CG1927	Dmel_CG1927	NP_001261302.1	210	CG1927, isoform B
3L	NT_037436.4	1970279	1971130	-	38263	CG11815	Dmel_CG11815	NP_647685.1	283	uncharacterized protein Dmel_CG11815
3L	NT_037436.4	1971817	1974242	+	38264	CG1139	Dmel_CG1139	NP_647686.1	451	CG1139
3L	NT_037436.4	2005307	2005546	-	10178933	CG42841	Dmel_CG42841	NP_001189025.1	79	uncharacterized protein Dmel_CG42841, isoform A
3L	NT_037436.4	2005307	2005546	-	10178933	CG42841	Dmel_CG42841	NP_001261303.1	79	uncharacterized protein Dmel_CG42841, isoform B
3L	NT_037436.4	2020554	2021958	-	7354373	CG42357	Dmel_CG42357	NP_001137870.1	449	uncharacterized protein Dmel_CG42357
3L	NT_037436.4	2022071	2023391	-	7354374	CG42356	Dmel_CG42356	NP_001137871.1	422	uncharacterized protein Dmel_CG42356
3L	NT_037436.4	2026991	2028326	+	5740507	CG34259	Dmel_CG34259	NP_001097479.2	426	uncharacterized protein Dmel_CG34259
3L	NT_037436.4	2037444	2038041	-	317969	CG42355	Dmel_CG42355	NP_001286911.1	161	uncharacterized protein Dmel_CG42355, isoform D
3L	NT_037436.4	2037444	2038041	-	317969	CG42355	Dmel_CG42355	NP_001097478.3	161	uncharacterized protein Dmel_CG42355, isoform C
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261305.1	18440	sallimus, isoform Q
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261312.1	18031	sallimus, isoform X
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261311.1	15478	sallimus, isoform W
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261314.1	15155	sallimus, isoform Z
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261313.1	10625	sallimus, isoform Y
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261306.1	18117	sallimus, isoform R
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261304.1	18468	sallimus, isoform P
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261309.1	15953	sallimus, isoform U
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261308.1	18017	sallimus, isoform T
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261307.1	15481	sallimus, isoform S
3L	NT_037436.4	2040382	2114297	-	44013	sls	Dmel_CG1915	NP_001261310.1	16146	sallimus, isoform V
3L	NT_037436.4	2090989	2114297	-	44013	sls	Dmel_CG1915	NP_524676.2	4796	sallimus, isoform A
3L	NT_037436.4	2090989	2114297	-	44013	sls	Dmel_CG1915	NP_001246551.1	4811	sallimus, isoform D
3L	NT_037436.4	2117616	2150089	-	2769001	zormin	Dmel_CG33484	NP_001036578.2	2960	zormin, isoform K
3L	NT_037436.4	2122857	2150089	-	2769001	zormin	Dmel_CG33484	NP_001036579.2	3640	zormin, isoform I
3L	NT_037436.4	2122857	2150089	-	2769001	zormin	Dmel_CG33484	NP_001261317.1	3664	zormin, isoform J
3L	NT_037436.4	2122857	2150089	-	2769001	zormin	Dmel_CG33484	NP_001261315.1	3536	zormin, isoform E
3L	NT_037436.4	2122857	2150089	-	2769001	zormin	Dmel_CG33484	NP_001036577.2	3079	zormin, isoform G
3L	NT_037436.4	2122857	2150089	-	2769001	zormin	Dmel_CG33484	NP_995962.2	2935	zormin, isoform F
3L	NT_037436.4	2153805	2161797	-	38273	CG15822	Dmel_CG15822	NP_001261319.1	1060	uncharacterized protein Dmel_CG15822, isoform F
3L	NT_037436.4	2153805	2161797	-	38273	CG15822	Dmel_CG15822	NP_001261318.1	1060	uncharacterized protein Dmel_CG15822, isoform E
3L	NT_037436.4	2153805	2161797	-	38273	CG15822	Dmel_CG15822	NP_647693.2	1060	uncharacterized protein Dmel_CG15822, isoform D
3L	NT_037436.4	2153805	2161797	-	38273	CG15822	Dmel_CG15822	NP_001137872.2	1267	uncharacterized protein Dmel_CG15822, isoform G
3L	NT_037436.4	2167771	2168969	-	38274	CG15879	Dmel_CG15879	NP_647694.1	342	uncharacterized protein Dmel_CG15879
3L	NT_037436.4	2169709	2170846	-	48613	CG5704	Dmel_CG5704	NP_652068.1	335	CG5704, isoform A
3L	NT_037436.4	2169709	2170846	-	48613	CG5704	Dmel_CG5704	NP_001286912.1	335	CG5704, isoform B
3L	NT_037436.4	2173061	2174142	-	38277	CG15820	Dmel_CG15820	NP_647696.1	308	uncharacterized protein Dmel_CG15820
3L	NT_037436.4	2185982	2187649	+	38278	CG13810	Dmel_CG13810	NP_647697.2	490	uncharacterized protein Dmel_CG13810
3L	NT_037436.4	2189388	2191990	-	48422	CG5707	Dmel_CG5707	NP_652065.1	357	CG5707, isoform A
3L	NT_037436.4	2189388	2191204	-	48422	CG5707	Dmel_CG5707	NP_001246564.1	361	CG5707, isoform C
3L	NT_037436.4	2189388	2191204	-	48422	CG5707	Dmel_CG5707	NP_001246563.1	361	CG5707, isoform B
3L	NT_037436.4	2197540	2197884	+	38280	CG8960	Dmel_CG8960	NP_647698.1	114	CG8960, isoform A
3L	NT_037436.4	2197597	2197884	+	38280	CG8960	Dmel_CG8960	NP_728719.1	95	CG8960, isoform B
3L	NT_037436.4	2211048	2212388	-	38281	CG15878	Dmel_CG15878	NP_647699.1	446	uncharacterized protein Dmel_CG15878
3L	NT_037436.4	2229646	2235253	+	38282	Oseg2	Dmel_CG13809	NP_647700.2	1754	outer segment 2
3L	NT_037436.4	2235426	2236951	-	38283	CG9018	Dmel_CG9018	NP_647701.1	375	CG9018, isoform A
3L	NT_037436.4	2235778	2236951	-	38283	CG9018	Dmel_CG9018	NP_728723.1	341	CG9018, isoform B
3L	NT_037436.4	2238428	2243622	+	38284	ACXD	Dmel_CG5712	NP_620469.2	1162	ACXD, isoform A
3L	NT_037436.4	2238428	2241109	+	38284	ACXD	Dmel_CG5712	NP_001261320.1	506	ACXD, isoform B
3L	NT_037436.4	2244530	2248483	+	38285	CG32301	Dmel_CG32301	NP_728724.2	1111	uncharacterized protein Dmel_CG32301, isoform C
3L	NT_037436.4	2244530	2246993	+	38285	CG32301	Dmel_CG32301	NP_001261321.1	684	uncharacterized protein Dmel_CG32301, isoform D
3L	NT_037436.4	2244768	2248483	+	38285	CG32301	Dmel_CG32301	NP_001163327.1	1050	uncharacterized protein Dmel_CG32301, isoform B
3L	NT_037436.4	2248635	2252729	+	317967	CG32305	Dmel_CG32305	NP_728725.2	1164	uncharacterized protein Dmel_CG32305
3L	NT_037436.4	2253097	2255812	-	38286	CG1275	Dmel_CG1275	NP_728727.1	340	CG1275, isoform A
3L	NT_037436.4	2253097	2256621	-	38286	CG1275	Dmel_CG1275	NP_728726.1	254	CG1275, isoform C
3L	NT_037436.4	2253097	2253969	-	38286	CG1275	Dmel_CG1275	NP_995963.1	243	CG1275, isoform D
3L	NT_037436.4	2253097	2255812	-	38286	CG1275	Dmel_CG1275	NP_647703.1	340	CG1275, isoform B
3L	NT_037436.4	2257754	2258673	+	38287	CG2034	Dmel_CG2034	NP_647704.1	262	CG2034, isoform A
3L	NT_037436.4	2257754	2258673	+	38287	CG2034	Dmel_CG2034	NP_001261322.1	262	CG2034, isoform B
3L	NT_037436.4	2259329	2262405	-	38288	oxt	Dmel_CG32300	NP_647705.1	876	peptide O-xylosyltransferase
3L	NT_037436.4	2262973	2263546	+	38290	CG13807	Dmel_CG13807	NP_647706.1	170	uncharacterized protein Dmel_CG13807
3L	NT_037436.4	2263648	2265775	-	38291	ecd	Dmel_CG5714	NP_647707.1	684	ecdysoneless
3L	NT_037436.4	2266502	2267467	+	38292	CG13806	Dmel_CG13806	NP_647708.1	297	uncharacterized protein Dmel_CG13806
3L	NT_037436.4	2267870	2268529	+	317966	obst-I	Dmel_CG32304	NP_728731.1	219	obstructor-I
3L	NT_037436.4	2268840	2269781	+	38293	CG32302	Dmel_CG32302	NP_728732.1	313	uncharacterized protein Dmel_CG32302
3L	NT_037436.4	2269965	2272691	-	38294	yellow-g	Dmel_CG5717	NP_523888.1	393	yellow-g
3L	NT_037436.4	2276598	2277804	+	38295	yellow-g2	Dmel_CG13804	NP_647710.1	382	yellow-g2
3L	NT_037436.4	2297662	2300046	+	38296	MsR2	Dmel_CG43745	NP_647711.1	488	myosuppressin receptor 2, isoform A
3L	NT_037436.4	2297662	2300046	+	38296	MsR2	Dmel_CG43745	NP_728735.2	488	myosuppressin receptor 2, isoform B
3L	NT_037436.4	2297662	2300523	+	38296	MsR2	Dmel_CG43745	NP_001261323.1	647	myosuppressin receptor 2, isoform C
3L	NT_037436.4	2338922	2344351	+	38298	MsR1	Dmel_CG8985	NP_001261324.1	556	myosuppressin receptor 1, isoform B
3L	NT_037436.4	2338922	2344117	+	38298	MsR1	Dmel_CG8985	NP_647713.2	478	myosuppressin receptor 1, isoform A
3L	NT_037436.4	2360566	2362638	+	38299	CG13801	Dmel_CG13801	NP_647714.1	690	uncharacterized protein Dmel_CG13801
3L	NT_037436.4	2368639	2371662	-	38300	CG1317	Dmel_CG1317	NP_001163328.1	988	CG1317, isoform C
3L	NT_037436.4	2368639	2371662	-	38300	CG1317	Dmel_CG1317	NP_647715.2	988	CG1317, isoform B
3L	NT_037436.4	2368639	2371662	-	38300	CG1317	Dmel_CG1317	NP_001286913.1	988	CG1317, isoform D
3L	NT_037436.4	2372282	2372772	+	38301	CG8993	Dmel_CG8993	NP_647716.1	142	CG8993
3L	NT_037436.4	2372909	2373422	-	38302	mRpL23	Dmel_CG1320	NP_001261326.1	150	mitochondrial ribosomal protein L23, isoform D
3L	NT_037436.4	2372909	2373422	-	38302	mRpL23	Dmel_CG1320	NP_001137873.1	150	mitochondrial ribosomal protein L23, isoform B
3L	NT_037436.4	2372909	2373422	-	38302	mRpL23	Dmel_CG1320	NP_523889.1	150	mitochondrial ribosomal protein L23, isoform A
3L	NT_037436.4	2372909	2373422	-	38302	mRpL23	Dmel_CG1320	NP_001261325.1	150	mitochondrial ribosomal protein L23, isoform C
3L	NT_037436.4	2373796	2376413	+	38303	CG9004	Dmel_CG9004	NP_647717.1	854	CG9004
3L	NT_037436.4	2376544	2377432	-	38304	CG15877	Dmel_CG15877	NP_647718.1	277	uncharacterized protein Dmel_CG15877
3L	NT_037436.4	2388767	2464303	+	38306	CG45186	Dmel_CG45186	NP_001286916.1	3359	uncharacterized protein Dmel_CG45186, isoform AB
3L	NT_037436.4	2388767	2408341	+	38306	CG45186	Dmel_CG45186	NP_647719.2	1933	uncharacterized protein Dmel_CG45186, isoform AF
3L	NT_037436.4	2388767	2498645	+	38306	CG45186	Dmel_CG45186	NP_001286919.1	4526	uncharacterized protein Dmel_CG45186, isoform AE
3L	NT_037436.4	2389336	2389584	+	10178948	CG42787	Dmel_CG42787	NP_001189028.1	82	uncharacterized protein Dmel_CG42787
3L	NT_037436.4	2389721	2390185	-	317963	CG32298	Dmel_CG32298	NP_001137874.1	134	uncharacterized protein Dmel_CG32299, isoform B
3L	NT_037436.4	2389721	2390185	-	317963	CG32298	Dmel_CG32298	NP_728741.1	134	uncharacterized protein Dmel_CG32299, isoform A
3L	NT_037436.4	2390274	2390935	-	317963	CG32298	Dmel_CG32298	NP_728742.1	200	uncharacterized protein Dmel_CG32298
3L	NT_037436.4	2402723	2464303	+	38306	CG45186	Dmel_CG45186	NP_001286918.1	3473	uncharacterized protein Dmel_CG45186, isoform AD
3L	NT_037436.4	2402723	2464303	+	38306	CG45186	Dmel_CG45186	NP_001286917.1	3115	uncharacterized protein Dmel_CG45186, isoform AC
3L	NT_037436.4	2402723	2408341	+	38306	CG45186	Dmel_CG45186	NP_001189027.1	1872	uncharacterized protein Dmel_CG45186, isoform AG
3L	NT_037436.4	2402723	2408341	+	38306	CG45186	Dmel_CG45186	NP_001189026.1	1872	uncharacterized protein Dmel_CG45186, isoform AH
3L	NT_037436.4	2429303	2464303	+	38306	CG45186	Dmel_CG45186	NP_647721.3	2223	uncharacterized protein Dmel_CG45186, isoform K
3L	NT_037436.4	2429303	2466159	+	38306	CG45186	Dmel_CG45186	NP_001189032.1	2028	uncharacterized protein Dmel_CG45186, isoform H
3L	NT_037436.4	2429303	2465581	+	38306	CG45186	Dmel_CG45186	NP_001189031.1	1967	uncharacterized protein Dmel_CG45186, isoform G
3L	NT_037436.4	2429303	2498645	+	38306	CG45186	Dmel_CG45186	NP_001286915.1	3040	uncharacterized protein Dmel_CG45186, isoform W
3L	NT_037436.4	2435537	2465581	+	38306	CG45186	Dmel_CG45186	NP_001246568.1	1621	uncharacterized protein Dmel_CG45186, isoform S
3L	NT_037436.4	2435537	2465581	+	38306	CG45186	Dmel_CG45186	NP_001189029.1	1446	uncharacterized protein Dmel_CG45186, isoform N
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001246567.1	1702	uncharacterized protein Dmel_CG45186, isoform R
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001261328.1	1519	uncharacterized protein Dmel_CG45186, isoform U
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001246566.1	1877	uncharacterized protein Dmel_CG45186, isoform Q
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_995964.2	1877	uncharacterized protein Dmel_CG45186, isoform L
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001261327.1	1877	uncharacterized protein Dmel_CG45186, isoform T
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001163329.1	1702	uncharacterized protein Dmel_CG45186, isoform E
3L	NT_037436.4	2435537	2464303	+	38306	CG45186	Dmel_CG45186	NP_001189030.1	1877	uncharacterized protein Dmel_CG45186, isoform M
3L	NT_037436.4	2439713	2464303	+	38306	CG45186	Dmel_CG45186	NP_001163330.1	1400	uncharacterized protein Dmel_CG45186, isoform F
3L	NT_037436.4	2439713	2464303	+	38306	CG45186	Dmel_CG45186	NP_001286914.1	1574	uncharacterized protein Dmel_CG45186, isoform V
3L	NT_037436.4	2456858	2464303	+	38306	CG45186	Dmel_CG45186	NP_001189033.2	663	uncharacterized protein Dmel_CG45186, isoform P
3L	NT_037436.4	2456858	2465581	+	38306	CG45186	Dmel_CG45186	NP_001246565.1	407	uncharacterized protein Dmel_CG45186, isoform O
3L	NT_037436.4	2459955	2465581	+	38306	CG45186	Dmel_CG45186	NP_001189034.1	266	uncharacterized protein Dmel_CG45186, isoform J
3L	NT_037436.4	2459955	2498645	+	38306	CG45186	Dmel_CG45186	NP_995968.2	1514	uncharacterized protein Dmel_CG45186, isoform X
3L	NT_037436.4	2461088	2464303	+	38306	CG45186	Dmel_CG45186	NP_728744.1	475	uncharacterized protein Dmel_CG45186, isoform A
3L	NT_037436.4	2462981	2464303	+	38306	CG45186	Dmel_CG45186	NP_728745.1	416	uncharacterized protein Dmel_CG45186, isoform C
3L	NT_037436.4	2474767	2475594	-	38310	CG16762	Dmel_CG16762	NP_647722.1	254	uncharacterized protein Dmel_CG16762
3L	NT_037436.4	2476403	2478308	-	38311	Cyp4d20	Dmel_CG16761	NP_647723.2	510	Cyp4d20
3L	NT_037436.4	2485076	2498645	+	38306	CG45186	Dmel_CG45186	NP_001027104.1	1156	uncharacterized protein Dmel_CG45186, isoform Y
3L	NT_037436.4	2485076	2498645	+	38306	CG45186	Dmel_CG45186	NP_995966.1	1156	uncharacterized protein Dmel_CG45186, isoform Z
3L	NT_037436.4	2491123	2492070	+	38313	CG1146	Dmel_CG1146	NP_647725.1	315	CG1146, isoform A
3L	NT_037436.4	2491123	2492070	+	38313	CG1146	Dmel_CG1146	NP_728749.1	315	CG1146, isoform B
3L	NT_037436.4	2491123	2492070	+	38313	CG1146	Dmel_CG1146	NP_001286920.1	315	CG1146, isoform D
3L	NT_037436.4	2491123	2492070	+	38313	CG1146	Dmel_CG1146	NP_728750.1	315	CG1146, isoform C
3L	NT_037436.4	2494748	2498645	+	38306	CG45186	Dmel_CG45186	NP_001261329.1	1111	uncharacterized protein Dmel_CG45186, isoform AA
3L	NT_037436.4	2499537	2503273	-	38315	CG16758	Dmel_CG16758	NP_647727.2	353	uncharacterized protein Dmel_CG16758, isoform B
3L	NT_037436.4	2499537	2502497	-	38315	CG16758	Dmel_CG16758	NP_995970.1	321	uncharacterized protein Dmel_CG16758, isoform E
3L	NT_037436.4	2499537	2503273	-	38315	CG16758	Dmel_CG16758	NP_001246569.1	372	uncharacterized protein Dmel_CG16758, isoform G
3L	NT_037436.4	2499537	2503273	-	38315	CG16758	Dmel_CG16758	NP_001261330.1	396	uncharacterized protein Dmel_CG16758, isoform H
3L	NT_037436.4	2499537	2503273	-	38315	CG16758	Dmel_CG16758	NP_728752.1	329	uncharacterized protein Dmel_CG16758, isoform D
3L	NT_037436.4	2499537	2502722	-	38315	CG16758	Dmel_CG16758	NP_995969.1	328	uncharacterized protein Dmel_CG16758, isoform F
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246573.1	1817	spinophilin, isoform E
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001286921.1	1831	spinophilin, isoform T
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_536777.3	2119	spinophilin, isoform S
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246572.1	2137	spinophilin, isoform D
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246570.1	2134	spinophilin, isoform B
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246571.1	2134	spinophilin, isoform C
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246576.1	2134	spinophilin, isoform H
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246575.1	2121	spinophilin, isoform G
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246578.1	2148	spinophilin, isoform J
3L	NT_037436.4	2508307	2536211	-	46194	Spn	Dmel_CG16757	NP_001246577.1	2116	spinophilin, isoform I
3L	NT_037436.4	2509406	2536211	-	46194	Spn	Dmel_CG16757	NP_001246574.1	1684	spinophilin, isoform F
3L	NT_037436.4	2525851	2526927	-	317962	CG32295	Dmel_CG32295	NP_728755.1	358	uncharacterized protein Dmel_CG32295
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_001261333.1	1200	misshapen, isoform I
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_995972.1	1102	misshapen, isoform C
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_524679.3	1504	misshapen, isoform A
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_995974.1	1200	misshapen, isoform B
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_995973.1	1102	misshapen, isoform D
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_001261331.1	1404	misshapen, isoform F
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_001261332.1	1213	misshapen, isoform H
3L	NT_037436.4	2556556	2585682	-	44030	msn	Dmel_CG16973	NP_995971.2	1101	misshapen, isoform G
3L	NT_037436.4	2587753	2588716	+	44251	RpL8	Dmel_CG1263	NP_728756.1	256	ribosomal protein L8, isoform B
3L	NT_037436.4	2587753	2588716	+	44251	RpL8	Dmel_CG1263	NP_524726.1	256	ribosomal protein L8, isoform A
3L	NT_037436.4	2589487	2595046	+	38321	dos	Dmel_CG1044	NP_523890.2	878	daughter of sevenless, isoform A
3L	NT_037436.4	2592336	2595046	+	38321	dos	Dmel_CG1044	NP_728757.1	798	daughter of sevenless, isoform B
3L	NT_037436.4	2595870	2596849	+	38322	CG16984	Dmel_CG16984	NP_647729.1	307	uncharacterized protein Dmel_CG16984
3L	NT_037436.4	2596990	2599319	-	38324	CG12182	Dmel_CG12182	NP_001286922.1	694	uncharacterized protein Dmel_CG12182, isoform C
3L	NT_037436.4	2596990	2599319	-	38324	CG12182	Dmel_CG12182	NP_647731.2	694	uncharacterized protein Dmel_CG12182, isoform A
3L	NT_037436.4	2596990	2598924	-	38324	CG12182	Dmel_CG12182	NP_001261334.1	627	uncharacterized protein Dmel_CG12182, isoform B
3L	NT_037436.4	2599357	2600111	+	38323	CG16985	Dmel_CG16985	NP_647730.1	149	uncharacterized protein Dmel_CG16985
3L	NT_037436.4	2600870	2601362	+	38325	CG16986	Dmel_CG16986	NP_647732.1	143	uncharacterized protein Dmel_CG16986, isoform A
3L	NT_037436.4	2600870	2601362	+	38325	CG16986	Dmel_CG16986	NP_001189035.1	143	uncharacterized protein Dmel_CG16986, isoform B
3L	NT_037436.4	2601630	2629310	-	38326	Pxn	Dmel_CG12002	NP_995975.1	1527	peroxidasin, isoform E
3L	NT_037436.4	2601630	2629310	-	38326	Pxn	Dmel_CG12002	NP_523891.2	1527	peroxidasin, isoform A
3L	NT_037436.4	2601630	2629310	-	38326	Pxn	Dmel_CG12002	NP_995977.1	1527	peroxidasin, isoform C
3L	NT_037436.4	2601630	2629310	-	38326	Pxn	Dmel_CG12002	NP_995976.1	1527	peroxidasin, isoform D
3L	NT_037436.4	2610486	2629310	-	38326	Pxn	Dmel_CG12002	NP_728759.1	457	peroxidasin, isoform B
3L	NT_037436.4	2631812	2633743	+	7354428	CG42245	Dmel_CG42245	NP_001137876.1	151	uncharacterized protein Dmel_CG42245
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_728762.1	1152	MEP-1, isoform C
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_728764.1	1152	MEP-1, isoform E
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_728763.1	1152	MEP-1, isoform D
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_647733.1	1152	MEP-1, isoform A
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_728765.1	1152	MEP-1, isoform F
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_728761.1	1152	MEP-1, isoform B
3L	NT_037436.4	2637133	2641016	+	7354428	CG42245	Dmel_CG42245	NP_001137875.1	1152	MEP-1, isoform G
3L	NT_037436.4	2642413	2643346	-	38328	CG14949	Dmel_CG14949	NP_647734.1	208	uncharacterized protein Dmel_CG14949
3L	NT_037436.4	2645441	2646499	+	38329	CG1143	Dmel_CG1143	NP_647735.1	296	CG1143, isoform A
3L	NT_037436.4	2645441	2646499	+	38329	CG1143	Dmel_CG1143	NP_001261335.1	296	CG1143, isoform B
3L	NT_037436.4	2648532	2650087	+	38330	CG1246	Dmel_CG1246	NP_001286923.1	437	CG1246, isoform E
3L	NT_037436.4	2648532	2650087	+	38330	CG1246	Dmel_CG1246	NP_001261336.1	437	CG1246, isoform D
3L	NT_037436.4	2648532	2650087	+	38330	CG1246	Dmel_CG1246	NP_001189036.1	437	CG1246, isoform C
3L	NT_037436.4	2648532	2650087	+	38330	CG1246	Dmel_CG1246	NP_647736.1	437	CG1246, isoform B
3L	NT_037436.4	2650191	2651748	-	38331	ProRS-m	Dmel_CG12186	NP_647737.1	458	Prolyl-tRNA synthetase, mitochondrial, isoform A
3L	NT_037436.4	2651262	2651748	-	38331	ProRS-m	Dmel_CG12186	NP_001261337.1	123	Prolyl-tRNA synthetase, mitochondrial, isoform B
3L	NT_037436.4	2652134	2653189	+	38332	CG42304	Dmel_CG42304	NP_001137877.1	351	snurportin
3L	NT_037436.4	2653358	2655178	+	38332	CG42304	Dmel_CG42304	NP_728769.2	565	uncharacterized protein Dmel_CG42304, isoform A
3L	NT_037436.4	2653358	2655178	+	38332	CG42304	Dmel_CG42304	NP_001286924.1	565	uncharacterized protein Dmel_CG42304, isoform B
3L	NT_037436.4	2657481	2689524	-	38337	Fife	Dmel_CG43955	NP_001261340.1	1314	fife, isoform D
3L	NT_037436.4	2659709	2660222	+	2769005	CG33233	Dmel_CG33233	NP_995979.3	151	uncharacterized protein Dmel_CG33233, isoform E
3L	NT_037436.4	2659709	2661429	+	2769005	CG33233	Dmel_CG33233	NP_995978.2	489	uncharacterized protein Dmel_CG33233, isoform C
3L	NT_037436.4	2661672	2663577	+	2769006	CG33234	Dmel_CG33234	NP_995980.2	473	uncharacterized protein Dmel_CG33234, isoform E
3L	NT_037436.4	2661672	2663577	+	2769006	CG33234	Dmel_CG33234	NP_001097483.2	475	uncharacterized protein Dmel_CG33234, isoform D
3L	NT_037436.4	2665317	2689524	-	38337	Fife	Dmel_CG43955	NP_001261338.1	969	fife, isoform B
3L	NT_037436.4	2672823	2689524	-	38337	Fife	Dmel_CG43955	NP_647742.1	643	fife, isoform G
3L	NT_037436.4	2672823	2689524	-	38337	Fife	Dmel_CG43955	NP_001261339.1	643	fife, isoform F
3L	NT_037436.4	2719788	2728654	-	38338	Mrtf	Dmel_CG32296	NP_001246580.1	1495	Myocardin-related transcription factor, isoform D
3L	NT_037436.4	2719788	2728654	-	38338	Mrtf	Dmel_CG32296	NP_001137878.2	1495	Myocardin-related transcription factor, isoform G
3L	NT_037436.4	2719788	2761686	-	38338	Mrtf	Dmel_CG32296	NP_001137879.3	1788	Myocardin-related transcription factor, isoform H
3L	NT_037436.4	2739773	2740120	+	38340	Acp62F	Dmel_CG1262	NP_523892.1	115	accessory gland protein 62F
3L	NT_037436.4	2767268	2768002	+	38341	Non2	Dmel_CG1240	NP_647745.1	244	novel nucleolar protein 2
3L	NT_037436.4	2769384	2771789	-	38342	AhcyL1	Dmel_CG9977	NP_647746.1	521	adenosylhomocysteinase like 1
3L	NT_037436.4	2772608	2773902	-	38343	CG12093	Dmel_CG12093	NP_647747.1	380	uncharacterized protein Dmel_CG12093
3L	NT_037436.4	2774693	2780413	+	38344	Atg2	Dmel_CG1241	NP_647748.1	1906	Autophagy-related 2, isoform A
3L	NT_037436.4	2774693	2780413	+	38344	Atg2	Dmel_CG1241	NP_001261341.1	1906	Autophagy-related 2, isoform B
3L	NT_037436.4	2781013	2782056	+	38345	mRpS35	Dmel_CG2101	NP_523893.1	326	mitochondrial ribosomal protein S35
3L	NT_037436.4	2782901	2785658	+	38346	pgant6	Dmel_CG2103	NP_647749.2	666	polypeptide GalNAc transferase 6, isoform A
3L	NT_037436.4	2782901	2785658	+	38346	pgant6	Dmel_CG2103	NP_001261342.1	666	polypeptide GalNAc transferase 6, isoform C
3L	NT_037436.4	2782901	2785658	+	38346	pgant6	Dmel_CG2103	NP_728779.1	666	polypeptide GalNAc transferase 6, isoform B
3L	NT_037436.4	2788550	2871710	-	38347	Tet	Dmel_CG43444	NP_001261344.1	2921	Ten-Eleven translocation (TET) family protein, isoform F
3L	NT_037436.4	2788550	2796318	-	38347	Tet	Dmel_CG43444	NP_001246583.1	2056	Ten-Eleven translocation (TET) family protein, isoform D
3L	NT_037436.4	2788550	2796318	-	38347	Tet	Dmel_CG43444	NP_647750.4	2056	Ten-Eleven translocation (TET) family protein, isoform C
3L	NT_037436.4	2788550	2871710	-	38347	Tet	Dmel_CG43444	NP_001246582.1	2915	Ten-Eleven translocation (TET) family protein, isoform B
3L	NT_037436.4	2788550	2871710	-	38347	Tet	Dmel_CG43444	NP_001261343.1	2866	Ten-Eleven translocation (TET) family protein, isoform E
3L	NT_037436.4	2788550	2871710	-	38347	Tet	Dmel_CG43444	NP_001246581.1	2860	Ten-Eleven translocation (TET) family protein, isoform A
3L	NT_037436.4	2884091	2889163	-	38350	spz5	Dmel_CG9972	NP_647753.1	387	spatzle 5
3L	NT_037436.4	2915134	2916588	-	38351	CG9970	Dmel_CG9970	NP_647754.1	484	CG9970
3L	NT_037436.4	2924082	2953065	+	38352	Shab	Dmel_CG43128	NP_728783.1	985	shaker cognate b, isoform A
3L	NT_037436.4	2924082	2957533	+	38352	Shab	Dmel_CG43128	NP_001189039.1	1602	shaker cognate b, isoform I
3L	NT_037436.4	2924082	2953065	+	38352	Shab	Dmel_CG43128	NP_523894.2	1015	shaker cognate b, isoform B
3L	NT_037436.4	2924082	2957360	+	38352	Shab	Dmel_CG43128	NP_001189038.1	1537	shaker cognate b, isoform H
3L	NT_037436.4	2924082	2957533	+	38352	Shab	Dmel_CG43128	NP_001189037.1	1607	shaker cognate b, isoform M
3L	NT_037436.4	2924082	2957533	+	38352	Shab	Dmel_CG43128	NP_001261345.1	1602	shaker cognate b, isoform N
3L	NT_037436.4	2924082	2953065	+	38352	Shab	Dmel_CG43128	NP_001246584.1	972	shaker cognate b, isoform J
3L	NT_037436.4	2924082	2952784	+	38352	Shab	Dmel_CG43128	NP_001036580.1	1011	shaker cognate b, isoform C
3L	NT_037436.4	2924082	2944183	+	38352	Shab	Dmel_CG43128	NP_001097485.3	799	shaker cognate b, isoform K
3L	NT_037436.4	2924082	2953065	+	38352	Shab	Dmel_CG43128	NP_001246585.1	1010	shaker cognate b, isoform L
3L	NT_037436.4	2950335	2951387	-	318244	CG32846	Dmel_CG32846	NP_728784.1	329	uncharacterized protein Dmel_CG32846, isoform A
3L	NT_037436.4	2950335	2951523	-	318244	CG32846	Dmel_CG32846	NP_001189040.1	356	uncharacterized protein Dmel_CG32846, isoform B
3L	NT_037436.4	2959900	2961003	-	3885633	CG34025	Dmel_CG34025	NP_001033987.2	325	uncharacterized protein Dmel_CG34025
3L	NT_037436.4	2961744	2963616	+	38354	Or63a	Dmel_CG9969	NP_523895.2	420	odorant receptor 63a, isoform A
3L	NT_037436.4	2961744	2962491	+	38354	Or63a	Dmel_CG9969	NP_001163331.1	191	odorant receptor 63a, isoform B
3L	NT_037436.4	2981123	2983304	+	38355	CPT2	Dmel_CG2107	NP_647756.1	667	carnitine palmitoyltransferase 2
3L	NT_037436.4	2995250	2995859	+	38356	CG2113	Dmel_CG2113	NP_001261346.1	179	CG2113, isoform B
3L	NT_037436.4	2995250	2995859	+	38356	CG2113	Dmel_CG2113	NP_647757.2	183	CG2113, isoform A
3L	NT_037436.4	3008746	3010395	+	38357	FMRFaR	Dmel_CG2114	NP_001286925.1	549	FMRFamide receptor, isoform C
3L	NT_037436.4	3008746	3010395	+	38357	FMRFaR	Dmel_CG2114	NP_647758.1	549	FMRFamide receptor, isoform A
3L	NT_037436.4	3008746	3010395	+	38357	FMRFaR	Dmel_CG2114	NP_001261347.1	549	FMRFamide receptor, isoform B
3L	NT_037436.4	3015061	3016048	-	326220	CG32488	Dmel_CG32488	NP_728790.1	307	uncharacterized protein Dmel_CG32488, isoform A
3L	NT_037436.4	3015061	3016048	-	326220	CG32488	Dmel_CG32488	NP_001286926.1	307	uncharacterized protein Dmel_CG32488, isoform B
3L	NT_037436.4	3016186	3017215	-	38358	CG32487	Dmel_CG32487	NP_728791.1	320	uncharacterized protein Dmel_CG32487
3L	NT_037436.4	3024592	3026424	-	45960	aly	Dmel_CG2075	NP_001261348.1	568	always early, isoform B
3L	NT_037436.4	3024592	3026424	-	45960	aly	Dmel_CG2075	NP_524857.3	568	always early, isoform A
3L	NT_037436.4	3035294	3039976	+	38360	CG2162	Dmel_CG2162	NP_001163332.2	662	CG2162, isoform E
3L	NT_037436.4	3036868	3039976	+	38360	CG2162	Dmel_CG2162	NP_647760.1	535	CG2162, isoform A
3L	NT_037436.4	3038732	3039976	+	38360	CG2162	Dmel_CG2162	NP_001261349.2	315	CG2162, isoform F
3L	NT_037436.4	3043052	3043955	+	53577	Jafrac2	Dmel_CG1274	NP_001261350.1	242	thioredoxin peroxidase 2, isoform C
3L	NT_037436.4	3043052	3043955	+	53577	Jafrac2	Dmel_CG1274	NP_728793.1	242	thioredoxin peroxidase 2, isoform B
3L	NT_037436.4	3043052	3043955	+	53577	Jafrac2	Dmel_CG1274	NP_525002.1	242	thioredoxin peroxidase 2, isoform A
3L	NT_037436.4	3044846	3046751	-	38362	scramb2	Dmel_CG1893	NP_647761.1	263	scramblase 2
3L	NT_037436.4	3047190	3049654	+	326219	Sk2	Dmel_CG32484	NP_647762.3	661	sphingosine kinase 2
3L	NT_037436.4	3050539	3051514	+	38363	CG32485	Dmel_CG32485	NP_728794.1	222	uncharacterized protein Dmel_CG32485
3L	NT_037436.4	3052674	3054816	+	38364	CG1271	Dmel_CG1271	NP_647763.1	556	CG1271, isoform A
3L	NT_037436.4	3052674	3054816	+	38364	CG1271	Dmel_CG1271	NP_728795.1	539	CG1271, isoform D
3L	NT_037436.4	3053414	3054691	+	38364	CG1271	Dmel_CG1271	NP_995981.1	384	CG1271, isoform C
3L	NT_037436.4	3053414	3054816	+	38364	CG1271	Dmel_CG1271	NP_728796.1	406	CG1271, isoform B
3L	NT_037436.4	3055156	3055689	+	38365	CG16753	Dmel_CG16753	NP_647764.1	177	uncharacterized protein Dmel_CG16753
3L	NT_037436.4	3056725	3070539	-	38367	CG32486	Dmel_CG32486	NP_647765.1	412	uncharacterized protein Dmel_CG32486
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_995982.1	788	uncharacterized protein Dmel_CG11486, isoform H
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728801.1	757	uncharacterized protein Dmel_CG11486, isoform L
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728800.1	788	uncharacterized protein Dmel_CG11486, isoform N
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728797.1	788	uncharacterized protein Dmel_CG11486, isoform J
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728803.2	757	uncharacterized protein Dmel_CG11486, isoform R
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_001097487.1	757	uncharacterized protein Dmel_CG11486, isoform P
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_995983.1	788	uncharacterized protein Dmel_CG11486, isoform F
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728799.1	788	uncharacterized protein Dmel_CG11486, isoform M
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_728798.1	788	uncharacterized protein Dmel_CG11486, isoform K
3L	NT_037436.4	3073445	3088302	+	38369	CG11486	Dmel_CG11486	NP_001097488.1	788	uncharacterized protein Dmel_CG11486, isoform Q
3L	NT_037436.4	3078035	3088302	+	38369	CG11486	Dmel_CG11486	NP_728802.2	780	uncharacterized protein Dmel_CG11486, isoform C
3L	NT_037436.4	3078035	3088302	+	38369	CG11486	Dmel_CG11486	NP_001097486.1	749	uncharacterized protein Dmel_CG11486, isoform O
3L	NT_037436.4	3079989	3088302	+	38369	CG11486	Dmel_CG11486	NP_647767.1	790	uncharacterized protein Dmel_CG11486, isoform G
3L	NT_037436.4	3083744	3088302	+	38369	CG11486	Dmel_CG11486	NP_728805.1	742	uncharacterized protein Dmel_CG11486, isoform B
3L	NT_037436.4	3083744	3088302	+	38369	CG11486	Dmel_CG11486	NP_728806.1	742	uncharacterized protein Dmel_CG11486, isoform D
3L	NT_037436.4	3083744	3088302	+	38369	CG11486	Dmel_CG11486	NP_728804.1	742	uncharacterized protein Dmel_CG11486, isoform A
3L	NT_037436.4	3091614	3106676	-	38370	Cht7	Dmel_CG1869	NP_647768.3	1013	chitinase 7
3L	NT_037436.4	3110266	3111119	-	19835136	CG45066	Dmel_CG45066	NP_001246586.1	267	uncharacterized protein Dmel_CG45066
3L	NT_037436.4	3111299	3114443	-	38371	CG45067	Dmel_CG45067	NP_001334707.1	881	uncharacterized protein Dmel_CG45067
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_001261351.1	1013	prominin-like, isoform E
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_001246587.1	993	prominin-like, isoform D
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_001261353.1	993	prominin-like, isoform G
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_728809.1	1013	prominin-like, isoform A
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_647770.1	1013	prominin-like, isoform C
3L	NT_037436.4	3115920	3121070	-	38372	prominin-like	Dmel_CG7740	NP_728810.1	1013	prominin-like, isoform B
3L	NT_037436.4	3117830	3121070	-	38372	prominin-like	Dmel_CG7740	NP_001261352.1	899	prominin-like, isoform F
3L	NT_037436.4	3129326	3142908	-	38373	CG11537	Dmel_CG11537	NP_647771.1	488	uncharacterized protein Dmel_CG11537, isoform C
3L	NT_037436.4	3129326	3133040	-	38373	CG11537	Dmel_CG11537	NP_001261354.1	705	uncharacterized protein Dmel_CG11537, isoform G
3L	NT_037436.4	3129326	3133040	-	38373	CG11537	Dmel_CG11537	NP_001097489.1	705	uncharacterized protein Dmel_CG11537, isoform D
3L	NT_037436.4	3129326	3133040	-	38373	CG11537	Dmel_CG11537	NP_728811.1	680	uncharacterized protein Dmel_CG11537, isoform A
3L	NT_037436.4	3129326	3133040	-	38373	CG11537	Dmel_CG11537	NP_001097490.1	705	uncharacterized protein Dmel_CG11537, isoform E
3L	NT_037436.4	3129326	3133040	-	38373	CG11537	Dmel_CG11537	NP_728812.1	680	uncharacterized protein Dmel_CG11537, isoform B
3L	NT_037436.4	3129489	3133040	-	38373	CG11537	Dmel_CG11537	NP_001246588.1	680	uncharacterized protein Dmel_CG11537, isoform F
3L	NT_037436.4	3143992	3145266	+	38374	CG1291	Dmel_CG1291	NP_647772.1	424	CG1291
3L	NT_037436.4	3145501	3148045	-	38375	Usp5	Dmel_CG12082	NP_647773.1	827	ubiquitin specific protease 5, isoform A
3L	NT_037436.4	3145501	3148045	-	38375	Usp5	Dmel_CG12082	NP_001246589.1	827	ubiquitin specific protease 5, isoform B
3L	NT_037436.4	3145501	3148045	-	38375	Usp5	Dmel_CG12082	NP_001334708.1	827	ubiquitin specific protease 5, isoform C
3L	NT_037436.4	3149983	3157586	+	38376	BtbVII	Dmel_CG43365	NP_647774.2	907	BTB-protein-VII, isoform F
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_001246591.1	743	BTB-protein-VII, isoform D
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_001246590.1	743	BTB-protein-VII, isoform A
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_523896.2	743	BTB-protein-VII, isoform B
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_001261356.1	747	BTB-protein-VII, isoform I
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_728814.1	743	BTB-protein-VII, isoform E
3L	NT_037436.4	3149983	3153533	+	38376	BtbVII	Dmel_CG43365	NP_001261355.1	748	BTB-protein-VII, isoform H
3L	NT_037436.4	3149983	3153752	+	38376	BtbVII	Dmel_CG43365	NP_001137880.2	816	BTB-protein-VII, isoform G
3L	NT_037436.4	3158557	3159472	-	38378	ND-30	Dmel_CG12079	NP_647775.1	265	NADH dehydrogenase (ubiquinone) 30 kDa subunit
3L	NT_037436.4	3160097	3161724	+	38379	CG15812	Dmel_CG15812	NP_523897.2	518	uncharacterized protein Dmel_CG15812, isoform A
3L	NT_037436.4	3160186	3161724	+	38379	CG15812	Dmel_CG15812	NP_728817.1	512	uncharacterized protein Dmel_CG15812, isoform B
3L	NT_037436.4	3162199	3163701	+	44098	rasp	Dmel_CG11495	NP_523898.1	500	rasp
3L	NT_037436.4	3163909	3165075	-	38381	Asciz	Dmel_CG14962	NP_001261357.1	388	ASCIZ zinc finger protein, isoform B
3L	NT_037436.4	3163909	3165075	-	38381	Asciz	Dmel_CG14962	NP_647776.1	388	ASCIZ zinc finger protein, isoform A
3L	NT_037436.4	3167979	3168440	+	317952	CG32280	Dmel_CG32280	NP_728820.1	130	uncharacterized protein Dmel_CG32280, isoform C
3L	NT_037436.4	3167979	3168440	+	317952	CG32280	Dmel_CG32280	NP_728819.1	130	uncharacterized protein Dmel_CG32280, isoform B
3L	NT_037436.4	3167979	3168440	+	317952	CG32280	Dmel_CG32280	NP_728818.1	130	uncharacterized protein Dmel_CG32280, isoform A
3L	NT_037436.4	3167979	3168440	+	317952	CG32280	Dmel_CG32280	NP_001286927.1	130	uncharacterized protein Dmel_CG32280, isoform D
3L	NT_037436.4	3169502	3170875	+	317953	CG32281	Dmel_CG32281	NP_728821.2	457	uncharacterized protein Dmel_CG32281
3L	NT_037436.4	3170945	3171337	+	38382	CG32278	Dmel_CG32278	NP_728822.1	111	uncharacterized protein Dmel_CG32278
3L	NT_037436.4	3171756	3172541	-	38383	CG14963	Dmel_CG14963	NP_647778.1	261	uncharacterized protein Dmel_CG14963
3L	NT_037436.4	3173263	3178279	-	38384	CG14964	Dmel_CG14964	NP_647779.2	1443	uncharacterized protein Dmel_CG14964
3L	NT_037436.4	3179353	3184271	+	38385	Girdin	Dmel_CG12734	NP_001261359.1	1236	girdin, isoform D
3L	NT_037436.4	3179353	3184666	+	38385	Girdin	Dmel_CG12734	NP_001261358.1	1380	girdin, isoform C
3L	NT_037436.4	3179353	3184666	+	38385	Girdin	Dmel_CG12734	NP_647780.1	1381	girdin, isoform A
3L	NT_037436.4	3179353	3184666	+	38385	Girdin	Dmel_CG12734	NP_001261360.1	1346	girdin, isoform E
3L	NT_037436.4	3179353	3184271	+	38385	Girdin	Dmel_CG12734	NP_995984.1	1235	girdin, isoform B
3L	NT_037436.4	3185396	3186472	+	8674087	CG42494	Dmel_CG42494	NP_001163334.1	283	uncharacterized protein Dmel_CG42494, isoform B
3L	NT_037436.4	3185396	3186472	+	8674087	CG42494	Dmel_CG42494	NP_001163333.1	283	uncharacterized protein Dmel_CG42494, isoform A
3L	NT_037436.4	3185396	3186472	+	8674087	CG42494	Dmel_CG42494	NP_001286928.1	283	uncharacterized protein Dmel_CG42494, isoform C
3L	NT_037436.4	3186671	3187104	+	317956	CG32284	Dmel_CG32284	NP_728826.1	102	uncharacterized protein Dmel_CG32284
3L	NT_037436.4	3187579	3187990	+	38386	CG14957	Dmel_CG14957	NP_647781.1	96	uncharacterized protein Dmel_CG14957
3L	NT_037436.4	3188211	3189732	-	8674097	CG42525	Dmel_CG42525	NP_001261361.1	377	uncharacterized protein Dmel_CG42525, isoform B
3L	NT_037436.4	3188211	3189732	-	8674097	CG42525	Dmel_CG42525	NP_001163335.1	419	uncharacterized protein Dmel_CG42525, isoform A
3L	NT_037436.4	3189994	3190536	+	38387	CG14958	Dmel_CG14958	NP_647782.1	145	uncharacterized protein Dmel_CG14958
3L	NT_037436.4	3190757	3192430	-	38388	CG14965	Dmel_CG14965	NP_647783.3	557	uncharacterized protein Dmel_CG14965
3L	NT_037436.4	3194499	3196652	+	38389	Hsp83	Dmel_CG1242	NP_001261362.1	717	heat shock protein 83, isoform B
3L	NT_037436.4	3194499	3196652	+	38389	Hsp83	Dmel_CG1242	NP_523899.1	717	heat shock protein 83, isoform A
3L	NT_037436.4	3197098	3197520	-	38390	CG14966	Dmel_CG14966	NP_647784.1	140	uncharacterized protein Dmel_CG14966
3L	NT_037436.4	3198321	3198835	-	251645	CG32276	Dmel_CG32276	NP_728831.1	64	uncharacterized protein Dmel_CG32276, isoform B
3L	NT_037436.4	3198321	3198835	-	251645	CG32276	Dmel_CG32276	NP_728830.1	64	uncharacterized protein Dmel_CG32276, isoform A
3L	NT_037436.4	3199434	3210993	+	38391	gry	Dmel_CG17569	NP_647785.3	1320	gryzun
3L	NT_037436.4	3202314	3203060	-	38392	CG32271	Dmel_CG32271	NP_728833.1	248	uncharacterized protein Dmel_CG32271
3L	NT_037436.4	3203675	3204448	-	318901	CG33159	Dmel_CG33159	NP_788455.1	257	uncharacterized protein Dmel_CG33159
3L	NT_037436.4	3204664	3205449	-	38393	CG32277	Dmel_CG32277	NP_728835.1	261	uncharacterized protein Dmel_CG32277
3L	NT_037436.4	3205587	3206363	-	326265	CG33160	Dmel_CG33160	NP_788456.1	258	uncharacterized protein Dmel_CG33160
3L	NT_037436.4	3207023	3208021	-	3772569	CG32269	Dmel_CG32269	NP_001261363.1	332	uncharacterized protein Dmel_CG32269, isoform B
3L	NT_037436.4	3207023	3208021	-	3772569	CG32269	Dmel_CG32269	NP_647788.1	332	uncharacterized protein Dmel_CG32269, isoform A
3L	NT_037436.4	3208160	3208939	-	3772569	CG32269	Dmel_CG32269	NP_728837.1	259	uncharacterized protein Dmel_CG32270
3L	NT_037436.4	3211361	3218804	-	38395	CG14967	Dmel_CG14967	NP_001303402.1	2300	uncharacterized protein Dmel_CG14967, isoform C
3L	NT_037436.4	3211361	3218804	-	38395	CG14967	Dmel_CG14967	NP_647789.2	2300	uncharacterized protein Dmel_CG14967, isoform B
3L	NT_037436.4	3219304	3220718	+	38396	CG12034	Dmel_CG12034	NP_647790.1	442	uncharacterized protein Dmel_CG12034
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_001163337.1	144	ribosomal protein L28, isoform F
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_728840.1	144	ribosomal protein L28, isoform D
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_728839.1	144	ribosomal protein L28, isoform B
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_647791.2	144	ribosomal protein L28, isoform A
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_728841.2	144	ribosomal protein L28, isoform G
3L	NT_037436.4	3221185	3221974	-	38397	RpL28	Dmel_CG12740	NP_001163336.1	144	ribosomal protein L28, isoform E
3L	NT_037436.4	3223499	3224460	+	38398	CG17737	Dmel_CG17737	NP_647792.1	110	uncharacterized protein Dmel_CG17737
3L	NT_037436.4	3226524	3232051	+	38399	CG11505	Dmel_CG11505	NP_647793.1	1531	uncharacterized protein Dmel_CG11505, isoform B
3L	NT_037436.4	3226891	3232051	+	38399	CG11505	Dmel_CG11505	NP_995985.2	1521	uncharacterized protein Dmel_CG11505, isoform D
3L	NT_037436.4	3226891	3232051	+	38399	CG11505	Dmel_CG11505	NP_728843.1	1521	uncharacterized protein Dmel_CG11505, isoform A
3L	NT_037436.4	3237162	3238893	-	38400	CG17746	Dmel_CG17746	NP_728844.1	371	uncharacterized protein Dmel_CG17746, isoform B
3L	NT_037436.4	3237162	3238893	-	38400	CG17746	Dmel_CG17746	NP_647794.1	371	uncharacterized protein Dmel_CG17746, isoform A
3L	NT_037436.4	3243350	3244178	-	38401	CG12078	Dmel_CG12078	NP_647795.2	253	uncharacterized protein Dmel_CG12078, isoform A
3L	NT_037436.4	3243350	3244060	-	38401	CG12078	Dmel_CG12078	NP_001246593.1	236	uncharacterized protein Dmel_CG12078, isoform B
3L	NT_037436.4	3248664	3248810	+	12798574	CG43389	Dmel_CG43389	NP_001246594.1	48	uncharacterized protein Dmel_CG43389
3L	NT_037436.4	3266651	3267677	+	38402	ckd	Dmel_CG14959	NP_647796.2	140	cracked, isoform E
3L	NT_037436.4	3266651	3267677	+	38402	ckd	Dmel_CG14959	NP_728847.2	140	cracked, isoform D
3L	NT_037436.4	3266651	3267677	+	38402	ckd	Dmel_CG14959	NP_995986.1	140	cracked, isoform C
3L	NT_037436.4	3268495	3268900	+	5740186	CG34265	Dmel_CG34265	NP_001097491.1	112	uncharacterized protein Dmel_CG34265
3L	NT_037436.4	3271277	3276048	+	38403	CG14960	Dmel_CG14960	NP_647797.1	331	uncharacterized protein Dmel_CG14960
3L	NT_037436.4	3280562	3290527	+	38404	CG12017	Dmel_CG12017	NP_647798.1	594	uncharacterized protein Dmel_CG12017, isoform A
3L	NT_037436.4	3280562	3290527	+	38404	CG12017	Dmel_CG12017	NP_001246597.1	584	uncharacterized protein Dmel_CG12017, isoform D
3L	NT_037436.4	3280562	3289893	+	38404	CG12017	Dmel_CG12017	NP_001246595.1	522	uncharacterized protein Dmel_CG12017, isoform B
3L	NT_037436.4	3280562	3290527	+	38404	CG12017	Dmel_CG12017	NP_001246596.1	589	uncharacterized protein Dmel_CG12017, isoform C
3L	NT_037436.4	3295006	3298702	+	38405	CG12009	Dmel_CG12009	NP_647799.1	905	uncharacterized protein Dmel_CG12009, isoform A
3L	NT_037436.4	3296049	3298702	+	38405	CG12009	Dmel_CG12009	NP_001246598.1	864	uncharacterized protein Dmel_CG12009, isoform B
3L	NT_037436.4	3299523	3300797	-	38406	CG14968	Dmel_CG14968	NP_728855.1	199	uncharacterized protein Dmel_CG14968, isoform E
3L	NT_037436.4	3299523	3300797	-	38406	CG14968	Dmel_CG14968	NP_647800.1	199	uncharacterized protein Dmel_CG14968, isoform B
3L	NT_037436.4	3299523	3300797	-	38406	CG14968	Dmel_CG14968	NP_728854.1	199	uncharacterized protein Dmel_CG14968, isoform D
3L	NT_037436.4	3299523	3300797	-	38406	CG14968	Dmel_CG14968	NP_728852.1	199	uncharacterized protein Dmel_CG14968, isoform A
3L	NT_037436.4	3299523	3300797	-	38406	CG14968	Dmel_CG14968	NP_728853.1	199	uncharacterized protein Dmel_CG14968, isoform C
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_647801.1	449	zinc transporter 63C, isoform A
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_728859.1	449	zinc transporter 63C, isoform E
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_728856.1	449	zinc transporter 63C, isoform B
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_728858.1	449	zinc transporter 63C, isoform D
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_001261365.1	449	zinc transporter 63C, isoform G
3L	NT_037436.4	3310530	3313300	+	38407	ZnT63C	Dmel_CG17723	NP_001261364.1	545	zinc transporter 63C, isoform F
3L	NT_037436.4	3310530	3313012	+	38407	ZnT63C	Dmel_CG17723	NP_728857.1	449	zinc transporter 63C, isoform C
3L	NT_037436.4	3314375	3314587	+	38408	Drsl2	Dmel_CG32279	NP_728860.2	70	Drosomycin-like 2
3L	NT_037436.4	3315034	3315249	+	317955	Drsl3	Dmel_CG32283	NP_728861.1	71	Drosomycin-like 3
3L	NT_037436.4	3315637	3315852	+	317954	Drsl4	Dmel_CG32282	NP_728862.1	71	Drosomycin-like 4
3L	NT_037436.4	3316835	3317044	+	38409	Drsl5	Dmel_CG10812	NP_647803.1	69	Drosomycin-like 5
3L	NT_037436.4	3318230	3319192	-	38410	PIG-C	Dmel_CG12077	NP_647804.2	286	phosphatidylinositol glycan anchor biosynthesis, class C
3L	NT_037436.4	3319797	3320651	+	38411	CG12016	Dmel_CG12016	NP_001163338.1	81	uncharacterized protein Dmel_CG42456
3L	NT_037436.4	3320745	3321716	+	38411	CG12016	Dmel_CG12016	NP_647805.1	323	uncharacterized protein Dmel_CG12016, isoform A
3L	NT_037436.4	3320745	3321716	+	38411	CG12016	Dmel_CG12016	NP_728865.1	323	uncharacterized protein Dmel_CG12016, isoform B
3L	NT_037436.4	3322926	3325637	-	38412	Strip	Dmel_CG11526	NP_001261366.1	882	striatin interacting protein, isoform C
3L	NT_037436.4	3322926	3325637	-	38412	Strip	Dmel_CG11526	NP_728867.1	882	striatin interacting protein, isoform A
3L	NT_037436.4	3322926	3328869	-	38412	Strip	Dmel_CG11526	NP_647806.2	927	striatin interacting protein, isoform B
3L	NT_037436.4	3326632	3328442	+	38413	PHGPx	Dmel_CG12013	NP_728868.1	198	PHGPx, isoform C
3L	NT_037436.4	3327353	3328442	+	38413	PHGPx	Dmel_CG12013	NP_728869.1	238	PHGPx, isoform D
3L	NT_037436.4	3327866	3328442	+	38413	PHGPx	Dmel_CG12013	NP_728870.1	169	PHGPx, isoform A
3L	NT_037436.4	3330142	3332942	+	38414	CG14961	Dmel_CG14961	NP_647808.1	914	uncharacterized protein Dmel_CG14961
3L	NT_037436.4	3333445	3334557	-	38415	CG14969	Dmel_CG14969	NP_647809.3	315	uncharacterized protein Dmel_CG14969
3L	NT_037436.4	3335579	3335788	-	326207	Drsl1	Dmel_CG32274	NP_728872.1	69	Drosomycin-like 1
3L	NT_037436.4	3336144	3336362	-	38416	Drsl6	Dmel_CG32268	NP_728873.1	72	Drosomycin-like 6
3L	NT_037436.4	3350255	3367771	+	38418	kst	Dmel_CG12008	NP_001261367.1	4321	karst, isoform G
3L	NT_037436.4	3350255	3367771	+	38418	kst	Dmel_CG12008	NP_001097492.2	4337	karst, isoform E
3L	NT_037436.4	3351567	3367771	+	38418	kst	Dmel_CG12008	NP_001189041.1	4097	karst, isoform F
3L	NT_037436.4	3351567	3367771	+	38418	kst	Dmel_CG12008	NP_995988.1	4118	karst, isoform B
3L	NT_037436.4	3351567	3367771	+	38418	kst	Dmel_CG12008	NP_995987.1	4207	karst, isoform C
3L	NT_037436.4	3351567	3367771	+	38418	kst	Dmel_CG12008	NP_523900.1	4097	karst, isoform A
3L	NT_037436.4	3351567	3367771	+	38418	kst	Dmel_CG12008	NP_001261368.1	4207	karst, isoform H
3L	NT_037436.4	3369619	3369831	+	38419	Drs	Dmel_CG10810	NP_523901.1	70	drosomycin
3L	NT_037436.4	3371601	3374034	-	38420	YT521-B	Dmel_CG12076	NP_647811.2	721	YT521-B, isoform A
3L	NT_037436.4	3371601	3373852	-	38420	YT521-B	Dmel_CG12076	NP_728876.1	710	YT521-B, isoform B
3L	NT_037436.4	3374321	3376587	+	38421	CG12010	Dmel_CG12010	NP_728878.1	717	uncharacterized protein Dmel_CG12010
3L	NT_037436.4	3376881	3377300	+	38422	CG12012	Dmel_CG12012	NP_647813.1	122	uncharacterized protein Dmel_CG12012, isoform A
3L	NT_037436.4	3376881	3377300	+	38422	CG12012	Dmel_CG12012	NP_001286929.1	122	uncharacterized protein Dmel_CG12012, isoform C
3L	NT_037436.4	3377055	3377300	+	38422	CG12012	Dmel_CG12012	NP_001163339.1	81	uncharacterized protein Dmel_CG12012, isoform B
3L	NT_037436.4	3378285	3380003	+	38423	CG12014	Dmel_CG12014	NP_647814.1	512	uncharacterized protein Dmel_CG12014
3L	NT_037436.4	3402956	3404725	-	38424	sty	Dmel_CG1921	NP_728881.1	589	sprouty, isoform C
3L	NT_037436.4	3402956	3404725	-	38424	sty	Dmel_CG1921	NP_523902.2	589	sprouty, isoform B
3L	NT_037436.4	3428976	3460242	-	44261	eIF5B	Dmel_CG10840	NP_001246599.1	1144	eIF5B, isoform C
3L	NT_037436.4	3428976	3460242	-	44261	eIF5B	Dmel_CG10840	NP_001246600.1	1090	eIF5B, isoform D
3L	NT_037436.4	3428976	3460242	-	44261	eIF5B	Dmel_CG10840	NP_001246602.1	1144	eIF5B, isoform F
3L	NT_037436.4	3428976	3460242	-	44261	eIF5B	Dmel_CG10840	NP_001246601.1	1108	eIF5B, isoform E
3L	NT_037436.4	3428976	3460242	-	44261	eIF5B	Dmel_CG10840	NP_651974.1	1144	eIF5B, isoform B
3L	NT_037436.4	3462341	3466232	+	38427	armi	Dmel_CG11513	NP_647816.2	1188	armitage, isoform D
3L	NT_037436.4	3462341	3466232	+	38427	armi	Dmel_CG11513	NP_001014556.1	1188	armitage, isoform B
3L	NT_037436.4	3462443	3466232	+	38427	armi	Dmel_CG11513	NP_001246603.1	1154	armitage, isoform C
3L	NT_037436.4	3466539	3467892	+	38428	CycJ	Dmel_CG10308	NP_523903.1	386	cyclin J, isoform A
3L	NT_037436.4	3466539	3467524	+	38428	CycJ	Dmel_CG10308	NP_995989.1	261	cyclin J, isoform B
3L	NT_037436.4	3468781	3471002	-	38429	CG14971	Dmel_CG14971	NP_647817.2	469	uncharacterized protein Dmel_CG14971
3L	NT_037436.4	3471822	3472041	-	317946	CG32267	Dmel_CG32267	NP_728885.1	49	uncharacterized protein Dmel_CG32267
3L	NT_037436.4	3472687	3508533	+	38430	CG42324	Dmel_CG42324	NP_647819.3	1037	uncharacterized protein Dmel_CG42324, isoform K
3L	NT_037436.4	3472687	3505097	+	38430	CG42324	Dmel_CG42324	NP_647818.3	249	uncharacterized protein Dmel_CG42324, isoform F
3L	NT_037436.4	3472687	3508533	+	38430	CG42324	Dmel_CG42324	NP_001261372.1	1035	uncharacterized protein Dmel_CG42324, isoform J
3L	NT_037436.4	3483927	3484620	-	12798579	CG43074	Dmel_CG43074	NP_001246604.1	182	uncharacterized protein Dmel_CG43074
3L	NT_037436.4	3486159	3505097	+	38430	CG42324	Dmel_CG42324	NP_001261370.1	137	uncharacterized protein Dmel_CG42324, isoform H
3L	NT_037436.4	3486159	3508533	+	38430	CG42324	Dmel_CG42324	NP_001261369.1	925	uncharacterized protein Dmel_CG42324, isoform G
3L	NT_037436.4	3486159	3508533	+	38430	CG42324	Dmel_CG42324	NP_001261371.1	923	uncharacterized protein Dmel_CG42324, isoform I
3L	NT_037436.4	3511202	3512602	-	38432	ImpE2	Dmel_CG1934	NP_476580.1	466	Ecdysone-inducible gene E2
3L	NT_037436.4	3516774	3607566	+	38433	Eip63E	Dmel_CG10579	NP_523904.1	522	Ecdysone-induced protein 63E, isoform D
3L	NT_037436.4	3516774	3607566	+	38433	Eip63E	Dmel_CG10579	NP_728888.1	522	Ecdysone-induced protein 63E, isoform E
3L	NT_037436.4	3516774	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036581.1	509	Ecdysone-induced protein 63E, isoform F
3L	NT_037436.4	3516774	3607614	+	38433	Eip63E	Dmel_CG10579	NP_001261373.1	538	Ecdysone-induced protein 63E, isoform N
3L	NT_037436.4	3516774	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001189042.1	509	Ecdysone-induced protein 63E, isoform M
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036584.1	522	Ecdysone-induced protein 63E, isoform I
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_728889.1	509	Ecdysone-induced protein 63E, isoform A
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036585.1	522	Ecdysone-induced protein 63E, isoform G
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036586.1	509	Ecdysone-induced protein 63E, isoform J
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_728890.1	509	Ecdysone-induced protein 63E, isoform B
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036583.1	522	Ecdysone-induced protein 63E, isoform K
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001163340.1	522	Ecdysone-induced protein 63E, isoform L
3L	NT_037436.4	3546077	3607566	+	38433	Eip63E	Dmel_CG10579	NP_728891.1	509	Ecdysone-induced protein 63E, isoform C
3L	NT_037436.4	3552795	3607566	+	38433	Eip63E	Dmel_CG10579	NP_001036582.1	501	Ecdysone-induced protein 63E, isoform H
3L	NT_037436.4	3612325	3615073	+	38434	CG10359	Dmel_CG10359	NP_001137882.1	485	uncharacterized protein Dmel_CG10359, isoform E
3L	NT_037436.4	3612325	3615073	+	38434	CG10359	Dmel_CG10359	NP_001137881.1	459	uncharacterized protein Dmel_CG10359, isoform G
3L	NT_037436.4	3615394	3616549	+	38435	CG10357	Dmel_CG10357	NP_647821.2	321	uncharacterized protein Dmel_CG10357
3L	NT_037436.4	3620476	3620965	-	50167	CG14974	Dmel_CG14974	NP_001303361.1	125	uncharacterized protein Dmel_CG14974, isoform C
3L	NT_037436.4	3620476	3620965	-	50167	CG14974	Dmel_CG14974	NP_652332.1	126	uncharacterized protein Dmel_CG14974, isoform A
3L	NT_037436.4	3627082	3652902	+	38436	dar1	Dmel_CG12029	NP_001097493.1	751	dendritic arbor reduction 1
3L	NT_037436.4	3653465	3654636	-	38437	CG10862	Dmel_CG10862	NP_647823.1	354	uncharacterized protein Dmel_CG10862
3L	NT_037436.4	3659132	3659614	+	12798585	CG43098	Dmel_CG43098	NP_001246605.1	160	uncharacterized protein Dmel_CG43098
3L	NT_037436.4	3714133	3714567	+	12798588	CG43089	Dmel_CG43089	NP_001286930.1	144	uncharacterized protein Dmel_CG43089, isoform C
3L	NT_037436.4	3714133	3714567	+	12798588	CG43089	Dmel_CG43089	NP_001246606.1	144	uncharacterized protein Dmel_CG43089, isoform B
3L	NT_037436.4	3717392	3805959	-	38438	CG32264	Dmel_CG32264	NP_995990.3	822	uncharacterized protein Dmel_CG32264, isoform K
3L	NT_037436.4	3717392	3723774	-	38438	CG32264	Dmel_CG32264	NP_001189043.1	464	uncharacterized protein Dmel_CG32264, isoform G
3L	NT_037436.4	3717392	3781230	-	38438	CG32264	Dmel_CG32264	NP_001097494.1	998	uncharacterized protein Dmel_CG32264, isoform E
3L	NT_037436.4	3717392	3742875	-	38438	CG32264	Dmel_CG32264	NP_728898.1	790	uncharacterized protein Dmel_CG32264, isoform B
3L	NT_037436.4	3717392	3758443	-	38438	CG32264	Dmel_CG32264	NP_001246607.1	509	uncharacterized protein Dmel_CG32264, isoform J
3L	NT_037436.4	3717392	3800480	-	38438	CG32264	Dmel_CG32264	NP_001097495.2	927	uncharacterized protein Dmel_CG32264, isoform M
3L	NT_037436.4	3717392	3794607	-	38438	CG32264	Dmel_CG32264	NP_001261375.1	759	uncharacterized protein Dmel_CG32264, isoform L
3L	NT_037436.4	3717392	3781230	-	38438	CG32264	Dmel_CG32264	NP_728897.1	1008	uncharacterized protein Dmel_CG32264, isoform D
3L	NT_037436.4	3717392	3800480	-	38438	CG32264	Dmel_CG32264	NP_728896.1	937	uncharacterized protein Dmel_CG32264, isoform I
3L	NT_037436.4	3753693	3755089	-	38440	ppk27	Dmel_CG10858	NP_647826.2	422	pickpocket 27
3L	NT_037436.4	3790844	3791308	+	317945	CG32266	Dmel_CG32266	NP_728900.1	77	uncharacterized protein Dmel_CG32266
3L	NT_037436.4	3803959	3805959	-	38443	ntc	Dmel_CG10855	NP_647829.1	314	nutcracker
3L	NT_037436.4	3806812	3808816	+	38444	IntS10	Dmel_CG1120	NP_647830.1	631	integrator 10
3L	NT_037436.4	3809276	3810097	-	38445	CG32262	Dmel_CG32262	NP_647831.1	273	uncharacterized protein Dmel_CG32262
3L	NT_037436.4	3810350	3810970	-	317944	CG32263	Dmel_CG32263	NP_728903.1	206	uncharacterized protein Dmel_CG32263
3L	NT_037436.4	3811545	3813624	+	38446	CG12006	Dmel_CG12006	NP_647832.1	561	uncharacterized protein Dmel_CG12006, isoform A
3L	NT_037436.4	3811545	3813624	+	38446	CG12006	Dmel_CG12006	NP_995991.1	531	uncharacterized protein Dmel_CG12006, isoform B
3L	NT_037436.4	3814319	3817999	+	38447	Scsalpha	Dmel_CG1065	NP_523905.2	328	succinyl coenzyme A synthetase alpha subunit, isoform A
3L	NT_037436.4	3814319	3817999	+	38447	Scsalpha	Dmel_CG1065	NP_001189044.1	328	succinyl coenzyme A synthetase alpha subunit, isoform B
3L	NT_037436.4	3815985	3816345	-	38448	Acp63F	Dmel_CG10852	NP_523906.2	81	accessory gland protein 63F, isoform A
3L	NT_037436.4	3815985	3816345	-	38448	Acp63F	Dmel_CG10852	NP_001303386.1	81	accessory gland protein 63F, isoform B
3L	NT_037436.4	3818918	3839688	+	44543	enc	Dmel_CG10847	NP_001261377.1	1798	encore, isoform G
3L	NT_037436.4	3825524	3825667	+	2769007	Rdh	Dmel_CG14975	NP_995993.1	47	Rdh
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_001097496.1	1818	encore, isoform D
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_001097497.1	1937	encore, isoform E
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_001261376.1	1942	encore, isoform F
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_001261378.1	1827	encore, isoform H
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_524765.2	1818	encore, isoform B
3L	NT_037436.4	3829442	3839688	+	44543	enc	Dmel_CG10847	NP_995992.1	1823	encore, isoform A
3L	NT_037436.4	3846742	3860705	+	38451	Awh	Dmel_CG1072	NP_523907.2	214	arrowhead, isoform A
3L	NT_037436.4	3846742	3860988	+	38451	Awh	Dmel_CG1072	NP_001261379.1	287	arrowhead, isoform C
3L	NT_037436.4	3846742	3860952	+	38451	Awh	Dmel_CG1072	NP_728906.1	275	arrowhead, isoform B
3L	NT_037436.4	3846742	3860952	+	38451	Awh	Dmel_CG1072	NP_001261380.1	271	arrowhead, isoform D
3L	NT_037436.4	3892846	3894258	+	38452	Fie	Dmel_CG1079	NP_001261381.1	250	fire exit, isoform B
3L	NT_037436.4	3892846	3894258	+	38452	Fie	Dmel_CG1079	NP_573393.1	250	fire exit, isoform A
3L	NT_037436.4	3894999	3896603	-	38453	Gr63a	Dmel_CG14979	NP_001137883.1	489	gustatory receptor 63a
3L	NT_037436.4	3896937	3897487	+	38454	CG14977	Dmel_CG14977	NP_001261382.1	164	uncharacterized protein Dmel_CG14977, isoform B
3L	NT_037436.4	3896937	3897355	+	38454	CG14977	Dmel_CG14977	NP_647834.3	120	uncharacterized protein Dmel_CG14977, isoform A
3L	NT_037436.4	3897459	3899098	-	38455	Ccz1	Dmel_CG14980	NP_647835.1	485	Caffeine, calcium, zinc sensitivity 1
3L	NT_037436.4	3899468	3901759	-	38456	Ubi-p63E	Dmel_CG11624	NP_728908.1	763	Ubiquitin-63E, isoform A
3L	NT_037436.4	3899468	3901759	-	38456	Ubi-p63E	Dmel_CG11624	NP_523909.2	763	Ubiquitin-63E, isoform B
3L	NT_037436.4	3899468	3901759	-	38456	Ubi-p63E	Dmel_CG11624	NP_001261383.1	763	Ubiquitin-63E, isoform D
3L	NT_037436.4	3899468	3901759	-	38456	Ubi-p63E	Dmel_CG11624	NP_995994.1	763	Ubiquitin-63E, isoform C
3L	NT_037436.4	3903541	3904888	+	38457	Sc2	Dmel_CG10849	NP_647836.2	302	Sc2
3L	NT_037436.4	3905357	3907752	+	45574	ida	Dmel_CG10850	NP_647837.2	777	imaginal discs arrested
3L	NT_037436.4	3908223	3909780	-	38459	mge	Dmel_CG14981	NP_728910.1	122	maggie, isoform B
3L	NT_037436.4	3908223	3909322	-	38459	mge	Dmel_CG14981	NP_523910.1	148	maggie, isoform A
3L	NT_037436.4	3908983	3909322	-	38459	mge	Dmel_CG14981	NP_001261384.1	52	maggie, isoform C
3L	NT_037436.4	3911892	3933282	-	47878	Eip63F-1	Dmel_CG15855	NP_524902.2	193	Ecdysone-induced protein 63F 1, isoform A
3L	NT_037436.4	3911892	3924257	-	47878	Eip63F-1	Dmel_CG15855	NP_001189047.1	166	Ecdysone-induced protein 63F 1, isoform D
3L	NT_037436.4	3911892	3930996	-	47878	Eip63F-1	Dmel_CG15855	NP_001189046.1	181	Ecdysone-induced protein 63F 1, isoform C
3L	NT_037436.4	3911892	3929016	-	47878	Eip63F-1	Dmel_CG15855	NP_001189045.1	161	Ecdysone-induced protein 63F 1, isoform B
3L	NT_037436.4	3937013	3937746	-	38461	CG10866	Dmel_CG10866	NP_001286931.1	224	uncharacterized protein Dmel_CG10866, isoform B
3L	NT_037436.4	3937013	3937746	-	38461	CG10866	Dmel_CG10866	NP_647838.1	224	uncharacterized protein Dmel_CG10866, isoform A
3L	NT_037436.4	3938695	3940084	-	38462	CG12766	Dmel_CG12766	NP_647839.1	320	uncharacterized protein Dmel_CG12766
3L	NT_037436.4	3941113	3942432	-	38463	CG10863	Dmel_CG10863	NP_647840.1	316	uncharacterized protein Dmel_CG10863
3L	NT_037436.4	3943595	3946151	+	38464	CG14982	Dmel_CG14982	NP_647841.1	773	uncharacterized protein Dmel_CG14982, isoform B
3L	NT_037436.4	3943595	3946151	+	38464	CG14982	Dmel_CG14982	NP_001261385.1	773	uncharacterized protein Dmel_CG14982, isoform C
3L	NT_037436.4	3947934	3948610	+	38465	CG10853	Dmel_CG10853	NP_647842.1	155	uncharacterized protein Dmel_CG10853
3L	NT_037436.4	3948801	3949292	-	38466	CG14983	Dmel_CG14983	NP_647843.1	163	uncharacterized protein Dmel_CG14983
3L	NT_037436.4	3951352	3952348	-	38467	CG14984	Dmel_CG14984	NP_001261386.1	115	uncharacterized protein Dmel_CG14984, isoform C
3L	NT_037436.4	3951352	3952348	-	38467	CG14984	Dmel_CG14984	NP_647844.2	115	uncharacterized protein Dmel_CG14984, isoform B
3L	NT_037436.4	3958527	3962061	-	38468	CG12605	Dmel_CG12605	NP_995997.1	619	uncharacterized protein Dmel_CG12605, isoform A
3L	NT_037436.4	3958527	3962061	-	38468	CG12605	Dmel_CG12605	NP_001261388.1	619	uncharacterized protein Dmel_CG12605, isoform E
3L	NT_037436.4	3958527	3960019	-	38468	CG12605	Dmel_CG12605	NP_995996.1	474	uncharacterized protein Dmel_CG12605, isoform C
3L	NT_037436.4	3958527	3962061	-	38468	CG12605	Dmel_CG12605	NP_647845.2	619	uncharacterized protein Dmel_CG12605, isoform B
3L	NT_037436.4	3958527	3962061	-	38468	CG12605	Dmel_CG12605	NP_001261387.1	619	uncharacterized protein Dmel_CG12605, isoform D
3L	NT_037436.4	3973051	3973368	+	14462830	CG43915	Dmel_CG43915	NP_001261389.1	105	uncharacterized protein Dmel_CG43915
3L	NT_037436.4	3985064	3988058	+	38469	scrt	Dmel_CG1130	NP_001261390.1	653	scratch, isoform B
3L	NT_037436.4	3985064	3988058	+	38469	scrt	Dmel_CG1130	NP_523911.2	653	scratch, isoform A
3L	NT_037436.4	4003599	4004416	+	38470	CG14985	Dmel_CG14985	NP_001246608.1	190	uncharacterized protein Dmel_CG14985, isoform C
3L	NT_037436.4	4003599	4004669	+	38470	CG14985	Dmel_CG14985	NP_647846.2	241	uncharacterized protein Dmel_CG14985, isoform B
3L	NT_037436.4	4019094	4021179	+	38471	fd64A	Dmel_CG1132	NP_001246609.1	365	forkhead domain 64A, isoform B
3L	NT_037436.4	4019094	4021179	+	38471	fd64A	Dmel_CG1132	NP_523912.1	365	forkhead domain 64A, isoform A
3L	NT_037436.4	4021535	4022940	+	38472	Mul1	Dmel_CG1134	NP_001303365.1	338	mitochondrial E3 ubiquitin protein ligase 1, isoform B
3L	NT_037436.4	4021535	4022940	+	38472	Mul1	Dmel_CG1134	NP_647847.1	338	mitochondrial E3 ubiquitin protein ligase 1, isoform A
3L	NT_037436.4	4023067	4025130	-	38473	CG11594	Dmel_CG11594	NP_728918.1	548	uncharacterized protein Dmel_CG11594, isoform A
3L	NT_037436.4	4023067	4025130	-	38473	CG11594	Dmel_CG11594	NP_001261391.1	548	uncharacterized protein Dmel_CG11594, isoform E
3L	NT_037436.4	4023067	4025130	-	38473	CG11594	Dmel_CG11594	NP_647848.2	548	uncharacterized protein Dmel_CG11594, isoform D
3L	NT_037436.4	4023067	4025130	-	38473	CG11594	Dmel_CG11594	NP_728919.1	548	uncharacterized protein Dmel_CG11594, isoform C
3L	NT_037436.4	4026769	4028483	+	117481	Gr64a	Dmel_CG32261	NP_728920.1	456	gustatory receptor 64a
3L	NT_037436.4	4028684	4030247	+	117480	Gr64b	Dmel_CG32257	NP_728921.1	406	gustatory receptor 64b
3L	NT_037436.4	4030439	4031925	+	117480	Gr64b	Dmel_CG32257	NP_001246610.1	419	gustatory receptor 64c, isoform B
3L	NT_037436.4	4030439	4031925	+	117480	Gr64b	Dmel_CG32257	NP_523913.2	419	gustatory receptor 64c, isoform A
3L	NT_037436.4	4032098	4033583	+	3772638	Gr64d	Dmel_CG14987	NP_001027105.2	417	gustatory receptor 64d, isoform C
3L	NT_037436.4	4032337	4033583	+	3771916	Gr64e	Dmel_CG32258	NP_728922.2	353	gustatory receptor 64d, isoform A
3L	NT_037436.4	4033767	4035618	+	3771916	Gr64e	Dmel_CG32258	NP_728923.2	451	gustatory receptor 64e, isoform A
3L	NT_037436.4	4033767	4035618	+	3771916	Gr64e	Dmel_CG32258	NP_001027106.1	460	gustatory receptor 64e, isoform B
3L	NT_037436.4	4035799	4037539	+	117477	Gr64f	Dmel_CG32255	NP_728924.2	469	gustatory receptor 64f
3L	NT_037436.4	4038459	4040100	-	38477	CG11593	Dmel_CG11593	NP_647851.3	484	uncharacterized protein Dmel_CG11593, isoform B
3L	NT_037436.4	4038459	4040100	-	38477	CG11593	Dmel_CG11593	NP_001261392.1	484	uncharacterized protein Dmel_CG11593, isoform C
3L	NT_037436.4	4040629	4042487	+	38478	Rcd5	Dmel_CG1135	NP_647852.1	578	reduction in Cnn dots 5
3L	NT_037436.4	4046992	4058729	+	38479	CG1136	Dmel_CG1136	NP_647853.1	458	CG1136
3L	NT_037436.4	4047153	4047449	-	38480	Dpy-30L2	Dmel_CG11591	NP_001261393.1	98	Dpy-30-like 2, isoform B
3L	NT_037436.4	4047153	4047449	-	38480	Dpy-30L2	Dmel_CG11591	NP_647854.1	98	Dpy-30-like 2, isoform A
3L	NT_037436.4	4059922	4061851	+	59217	CG18869	Dmel_CG18869	NP_652703.1	583	uncharacterized protein Dmel_CG18869, isoform A
3L	NT_037436.4	4059922	4061851	+	59217	CG18869	Dmel_CG18869	NP_001261394.1	583	uncharacterized protein Dmel_CG18869, isoform B
3L	NT_037436.4	4062340	4064094	+	45282	dib	Dmel_CG12028	NP_524810.2	489	disembodied
3L	NT_037436.4	4065214	4068210	-	44096	wit	Dmel_CG10776	NP_001261395.1	913	wishful thinking, isoform B
3L	NT_037436.4	4065244	4068210	-	44096	wit	Dmel_CG10776	NP_524692.3	903	wishful thinking, isoform A
3L	NT_037436.4	4069629	4070182	+	317942	CG32259	Dmel_CG32259	NP_728929.2	163	uncharacterized protein Dmel_CG32259, isoform D
3L	NT_037436.4	4069629	4070182	+	317942	CG32259	Dmel_CG32259	NP_001163341.1	163	uncharacterized protein Dmel_CG32259, isoform C
3L	NT_037436.4	4072085	4073840	-	45577	Faa	Dmel_CG14993	NP_524830.2	417	fumarylacetoacetase
3L	NT_037436.4	4075365	4084790	-	38484	Gad1	Dmel_CG14994	NP_728931.1	510	glutamic acid decarboxylase 1, isoform C
3L	NT_037436.4	4075365	4084790	-	38484	Gad1	Dmel_CG14994	NP_523914.2	510	glutamic acid decarboxylase 1, isoform A
3L	NT_037436.4	4075365	4084790	-	38484	Gad1	Dmel_CG14994	NP_728930.1	510	glutamic acid decarboxylase 1, isoform B
3L	NT_037436.4	4075365	4084790	-	38484	Gad1	Dmel_CG14994	NP_001261396.1	510	glutamic acid decarboxylase 1, isoform D
3L	NT_037436.4	4088967	4090661	+	38485	CG14989	Dmel_CG14989	NP_001246612.1	246	uncharacterized protein Dmel_CG14989, isoform E
3L	NT_037436.4	4088967	4090661	+	38485	CG14989	Dmel_CG14989	NP_647855.3	246	uncharacterized protein Dmel_CG14989, isoform D
3L	NT_037436.4	4088967	4090661	+	38485	CG14989	Dmel_CG14989	NP_001246611.1	246	uncharacterized protein Dmel_CG14989, isoform C
3L	NT_037436.4	4089192	4090661	+	38485	CG14989	Dmel_CG14989	NP_001286932.1	171	uncharacterized protein Dmel_CG14989, isoform F
3L	NT_037436.4	4093239	4094273	+	38486	CG14990	Dmel_CG14990	NP_647856.2	322	uncharacterized protein Dmel_CG14990
3L	NT_037436.4	4095009	4101556	-	38487	CG14995	Dmel_CG14995	NP_001261397.1	419	uncharacterized protein Dmel_CG14995, isoform I
3L	NT_037436.4	4095009	4101556	-	38487	CG14995	Dmel_CG14995	NP_001163343.1	362	uncharacterized protein Dmel_CG14995, isoform G
3L	NT_037436.4	4095009	4101556	-	38487	CG14995	Dmel_CG14995	NP_728935.1	454	uncharacterized protein Dmel_CG14995, isoform A
3L	NT_037436.4	4095009	4101556	-	38487	CG14995	Dmel_CG14995	NP_728934.1	411	uncharacterized protein Dmel_CG14995, isoform C
3L	NT_037436.4	4095009	4101180	-	38487	CG14995	Dmel_CG14995	NP_647857.3	389	uncharacterized protein Dmel_CG14995, isoform H
3L	NT_037436.4	4095009	4101556	-	38487	CG14995	Dmel_CG14995	NP_728933.1	354	uncharacterized protein Dmel_CG14995, isoform D
3L	NT_037436.4	4097426	4101556	-	38487	CG14995	Dmel_CG14995	NP_001163342.1	232	uncharacterized protein Dmel_CG14995, isoform F
3L	NT_037436.4	4104260	4106386	+	38488	Fit1	Dmel_CG14991	NP_647858.2	708	fermitin 1, isoform B
3L	NT_037436.4	4104260	4106386	+	38488	Fit1	Dmel_CG14991	NP_728936.1	708	fermitin 1, isoform A
3L	NT_037436.4	4110501	4113787	+	38489	Ack	Dmel_CG14992	NP_647859.1	1073	activated Cdc42 kinase
3L	NT_037436.4	4114972	4122209	-	38490	Chd64	Dmel_CG14996	NP_647860.1	188	Chd64, isoform B
3L	NT_037436.4	4114972	4115737	-	38490	Chd64	Dmel_CG14996	NP_001261398.1	175	Chd64, isoform C
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001097498.1	1241	ensconsin, isoform F
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_728941.2	887	ensconsin, isoform A
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001261403.1	848	ensconsin, isoform H
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_728940.2	983	ensconsin, isoform D
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_728939.2	898	ensconsin, isoform E
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001261402.1	968	ensconsin, isoform J
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_728938.2	851	ensconsin, isoform B
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001261401.1	1100	ensconsin, isoform G
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001286933.1	898	ensconsin, isoform L
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_647861.2	833	ensconsin, isoform C
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001261400.1	1015	ensconsin, isoform K
3L	NT_037436.4	4124836	4134502	-	38491	ens	Dmel_CG14998	NP_001261399.1	933	ensconsin, isoform I
3L	NT_037436.4	4134936	4135983	-	38492	RfC4	Dmel_CG14999	NP_523915.1	331	replication factor C subunit 4
3L	NT_037436.4	4137021	4138814	-	38493	Rop	Dmel_CG15811	NP_523916.2	597	Ras opposite, isoform A
3L	NT_037436.4	4137021	4138814	-	38493	Rop	Dmel_CG15811	NP_001261404.1	597	Ras opposite, isoform B
3L	NT_037436.4	4139179	4140460	+	38494	Ras64B	Dmel_CG1167	NP_523917.2	192	Ras oncogene at 64B
3L	NT_037436.4	4141586	4141893	+	38495	Akh	Dmel_CG1171	NP_523918.1	79	adipokinetic hormone
3L	NT_037436.4	4142364	4145852	+	317943	CG32260	Dmel_CG32260	NP_001261405.1	395	uncharacterized protein Dmel_CG32260, isoform C
3L	NT_037436.4	4143186	4145852	+	317943	CG32260	Dmel_CG32260	NP_728942.1	575	uncharacterized protein Dmel_CG32260, isoform A
3L	NT_037436.4	4148929	4152286	+	38496	CG1299	Dmel_CG1299	NP_647862.1	511	CG1299, isoform A
3L	NT_037436.4	4148929	4152286	+	38496	CG1299	Dmel_CG1299	NP_001261406.1	442	CG1299, isoform B
3L	NT_037436.4	4153842	4160649	-	3346237	nab	Dmel_CG33545	NP_001014557.3	625	nab, isoform C
3L	NT_037436.4	4154059	4160649	-	3346237	nab	Dmel_CG33545	NP_001261407.1	554	nab, isoform D
3L	NT_037436.4	4154110	4160649	-	3346237	nab	Dmel_CG33545	NP_001163344.1	564	nab, isoform B
3L	NT_037436.4	4161995	4165588	-	38499	mas	Dmel_CG15002	NP_001261408.1	1046	masquerade, isoform C
3L	NT_037436.4	4161995	4165588	-	38499	mas	Dmel_CG15002	NP_523919.1	1047	masquerade, isoform B
3L	NT_037436.4	4170652	4173389	+	38500	Ero1L	Dmel_CG1333	NP_647865.2	483	endoplasmic reticulum oxidoreductin-1-like
3L	NT_037436.4	4173953	4192305	+	50169	CG18675	Dmel_CG18675	NP_652334.2	291	uncharacterized protein Dmel_CG18675
3L	NT_037436.4	4175389	4177643	-	38501	Teh4	Dmel_CG15003	NP_647866.2	524	tipE homolog 4
3L	NT_037436.4	4179542	4181801	-	38502	Teh2	Dmel_CG15004	NP_647867.1	309	tipE homolog 2, isoform A
3L	NT_037436.4	4180298	4181801	-	38502	Teh2	Dmel_CG15004	NP_001163345.1	313	tipE homolog 2, isoform B
3L	NT_037436.4	4183317	4184663	-	50170	Teh3	Dmel_CG18676	NP_652335.1	448	tipE homolog 3
3L	NT_037436.4	4186514	4186768	-	38503	VhaM9.7-c	Dmel_CG11589	NP_647868.1	84	vacuolar 
3L	NT_037436.4	4190592	4192255	+	38504	tipE	Dmel_CG1232	NP_728952.1	452	temperature-induced paralytic E, isoform B
3L	NT_037436.4	4190592	4192255	+	38504	tipE	Dmel_CG1232	NP_523920.1	452	temperature-induced paralytic E, isoform A
3L	NT_037436.4	4194285	4222592	+	38505	CG43367	Dmel_CG43367	NP_647869.3	2712	uncharacterized protein Dmel_CG43367, isoform D
3L	NT_037436.4	4194285	4222592	+	38505	CG43367	Dmel_CG43367	NP_001189048.2	2754	uncharacterized protein Dmel_CG43367, isoform C
3L	NT_037436.4	4195506	4222592	+	38505	CG43367	Dmel_CG43367	NP_001246614.1	2554	uncharacterized protein Dmel_CG43367, isoform F
3L	NT_037436.4	4195506	4222592	+	38505	CG43367	Dmel_CG43367	NP_001246613.1	2554	uncharacterized protein Dmel_CG43367, isoform E
3L	NT_037436.4	4200998	4204117	-	38506	CG15005	Dmel_CG15005	NP_647870.1	750	uncharacterized protein Dmel_CG15005
3L	NT_037436.4	4208187	4209092	-	38508	Cpr64Aa	Dmel_CG15006	NP_647872.1	192	cuticular protein 64Aa
3L	NT_037436.4	4211001	4211472	-	38509	Cpr64Ab	Dmel_CG15007	NP_647873.2	120	cuticular protein 64Ab
3L	NT_037436.4	4212245	4212873	-	38510	Cpr64Ac	Dmel_CG15008	NP_647874.1	188	cuticular protein 64Ac
3L	NT_037436.4	4215450	4216268	+	38511	Cpr64Ad	Dmel_CG1259	NP_647875.1	247	cuticular protein 64Ad
3L	NT_037436.4	4224837	4225703	-	38513	ImpL2	Dmel_CG15009	NP_728960.1	263	Ecdysone-inducible gene L2, isoform B
3L	NT_037436.4	4224837	4225703	-	38513	ImpL2	Dmel_CG15009	NP_001261409.1	263	Ecdysone-inducible gene L2, isoform D
3L	NT_037436.4	4224837	4225892	-	38513	ImpL2	Dmel_CG15009	NP_728961.2	267	Ecdysone-inducible gene L2, isoform C
3L	NT_037436.4	4224837	4235908	-	38513	ImpL2	Dmel_CG15009	NP_523921.3	266	Ecdysone-inducible gene L2, isoform A
3L	NT_037436.4	4240396	4242460	+	38514	CG14997	Dmel_CG14997	NP_728963.1	457	uncharacterized protein Dmel_CG14997, isoform B
3L	NT_037436.4	4240396	4242460	+	38514	CG14997	Dmel_CG14997	NP_647877.1	457	uncharacterized protein Dmel_CG14997, isoform A
3L	NT_037436.4	4242878	4245834	+	38515	pav	Dmel_CG1258	NP_477025.1	887	pavarotti
3L	NT_037436.4	4247476	4251801	-	38516	ago	Dmel_CG15010	NP_728964.1	1326	archipelago, isoform A
3L	NT_037436.4	4247476	4251801	-	38516	ago	Dmel_CG15010	NP_523922.1	1326	archipelago, isoform C
3L	NT_037436.4	4247476	4251801	-	38516	ago	Dmel_CG15010	NP_728965.1	1326	archipelago, isoform B
3L	NT_037436.4	4254815	4255930	+	38517	CG1265	Dmel_CG1265	NP_647878.1	221	CG1265
3L	NT_037436.4	4256074	4259127	-	38518	CG15011	Dmel_CG15011	NP_647879.1	840	uncharacterized protein Dmel_CG15011
3L	NT_037436.4	4259543	4261472	+	38519	CG1309	Dmel_CG1309	NP_647880.1	524	CG1309
3L	NT_037436.4	4261723	4262366	-	38520	CG11586	Dmel_CG11586	NP_001261410.1	194	uncharacterized protein Dmel_CG11586, isoform B
3L	NT_037436.4	4261723	4262366	-	38520	CG11586	Dmel_CG11586	NP_647881.1	194	uncharacterized protein Dmel_CG11586, isoform A
3L	NT_037436.4	4262814	4263071	+	38521	VhaM9.7-a	Dmel_CG1268	NP_001097500.1	85	vacuolar 
3L	NT_037436.4	4262814	4263071	+	38521	VhaM9.7-a	Dmel_CG1268	NP_001097499.1	85	vacuolar 
3L	NT_037436.4	4266789	4267503	-	3772289	CG33764	Dmel_CG33764	NP_001027107.1	180	uncharacterized protein Dmel_CG33764
3L	NT_037436.4	4272111	4277379	+	38522	CG1273	Dmel_CG1273	NP_647883.1	1168	CG1273
3L	NT_037436.4	4278134	4281346	+	38523	CG1311	Dmel_CG1311	NP_001261411.1	686	CG1311, isoform B
3L	NT_037436.4	4278134	4281346	+	38523	CG1311	Dmel_CG1311	NP_647884.1	691	CG1311, isoform A
3L	NT_037436.4	4281598	4282729	-	326206	CG11583	Dmel_CG11583	NP_001033989.1	356	uncharacterized protein Dmel_CG11583
3L	NT_037436.4	4283068	4283478	-	38525	srw	Dmel_CG11582	NP_647886.2	136	shrew
3L	NT_037436.4	4283964	4285918	+	38526	CG1316	Dmel_CG1316	NP_647887.1	470	CG1316
3L	NT_037436.4	4287150	4288291	+	38527	TfIIEbeta	Dmel_CG1276	NP_523923.1	292	transcription factor IIEbeta, isoform A
3L	NT_037436.4	4287351	4288291	+	38527	TfIIEbeta	Dmel_CG1276	NP_001163346.1	249	transcription factor IIEbeta, isoform B
3L	NT_037436.4	4289095	4291179	+	38528	Hexo1	Dmel_CG1318	NP_523924.1	622	hexosaminidase 1, isoform A
3L	NT_037436.4	4289095	4291069	+	38528	Hexo1	Dmel_CG1318	NP_728974.2	606	hexosaminidase 1, isoform F
3L	NT_037436.4	4289095	4291069	+	38528	Hexo1	Dmel_CG1318	NP_728975.1	606	hexosaminidase 1, isoform D
3L	NT_037436.4	4289095	4291069	+	38528	Hexo1	Dmel_CG1318	NP_728976.2	606	hexosaminidase 1, isoform E
3L	NT_037436.4	4291514	4292153	-	38529	CG15012	Dmel_CG15012	NP_001163347.1	152	uncharacterized protein Dmel_CG15012
3L	NT_037436.4	4292624	4293170	+	38530	Fdx2	Dmel_CG1319	NP_647889.2	152	ferredoxin 2
3L	NT_037436.4	4294522	4298595	-	38531	dyl	Dmel_CG15013	NP_647890.2	611	dusky-like, isoform A
3L	NT_037436.4	4294522	4298595	-	38531	dyl	Dmel_CG15013	NP_728980.1	611	dusky-like, isoform C
3L	NT_037436.4	4294522	4298595	-	38531	dyl	Dmel_CG15013	NP_728979.1	611	dusky-like, isoform B
3L	NT_037436.4	4313635	4318379	+	326205	Claspin	Dmel_CG32251	NP_001286934.1	1465	claspin, isoform B
3L	NT_037436.4	4313635	4318379	+	326205	Claspin	Dmel_CG32251	NP_728981.1	1465	claspin, isoform A
3L	NT_037436.4	4319051	4320949	+	38532	PMP34	Dmel_CG32250	NP_001246615.1	314	peroxisomal membrane protein 34, isoform B
3L	NT_037436.4	4319051	4320949	+	38532	PMP34	Dmel_CG32250	NP_728982.1	314	peroxisomal membrane protein 34, isoform A
3L	NT_037436.4	4321223	4322197	-	38533	CG15014	Dmel_CG15014	NP_647892.1	324	uncharacterized protein Dmel_CG15014
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001246620.1	612	Cdc42-interacting protein 4, isoform C
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001261412.1	602	Cdc42-interacting protein 4, isoform J
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001246622.1	624	Cdc42-interacting protein 4, isoform E
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001261413.1	611	Cdc42-interacting protein 4, isoform K
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_647893.2	631	Cdc42-interacting protein 4, isoform A
3L	NT_037436.4	4324057	4363862	-	38534	Cip4	Dmel_CG15015	NP_001246621.1	646	Cdc42-interacting protein 4, isoform D
3L	NT_037436.4	4324057	4363862	-	38534	Cip4	Dmel_CG15015	NP_001097501.1	665	Cdc42-interacting protein 4, isoform B
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001246616.1	644	Cdc42-interacting protein 4, isoform H
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001246619.1	612	Cdc42-interacting protein 4, isoform G
3L	NT_037436.4	4324057	4345497	-	38534	Cip4	Dmel_CG15015	NP_001246618.1	628	Cdc42-interacting protein 4, isoform F
3L	NT_037436.4	4324057	4364000	-	38534	Cip4	Dmel_CG15015	NP_001246617.1	623	Cdc42-interacting protein 4, isoform I
3L	NT_037436.4	4364701	4365210	+	38535	mRpS6	Dmel_CG15016	NP_001246623.1	147	mitochondrial ribosomal protein S6, isoform B
3L	NT_037436.4	4364701	4365210	+	38535	mRpS6	Dmel_CG15016	NP_523925.1	147	mitochondrial ribosomal protein S6, isoform A
3L	NT_037436.4	4365496	4366490	+	3346239	CG33514	Dmel_CG33514	NP_001014558.1	311	uncharacterized protein Dmel_CG33514
3L	NT_037436.4	4366698	4367414	-	38538	CG11342	Dmel_CG11342	NP_647896.1	238	uncharacterized protein Dmel_CG11342
3L	NT_037436.4	4369161	4370730	-	38539	DopEcR	Dmel_CG18314	NP_647897.2	322	Dopamine/Ecdysteroid receptor, isoform A
3L	NT_037436.4	4369161	4370730	-	38539	DopEcR	Dmel_CG18314	NP_001014560.1	322	Dopamine/Ecdysteroid receptor, isoform B
3L	NT_037436.4	4369161	4370730	-	38539	DopEcR	Dmel_CG18314	NP_001014559.1	322	Dopamine/Ecdysteroid receptor, isoform C
3L	NT_037436.4	4380928	4381486	-	317933	CG32240	Dmel_CG32240	NP_728987.1	145	uncharacterized protein Dmel_CG32240
3L	NT_037436.4	4390491	4402843	+	38540	slow	Dmel_CG7447	NP_647898.3	512	slowdown, isoform A
3L	NT_037436.4	4390491	4402843	+	38540	slow	Dmel_CG7447	NP_788461.1	512	slowdown, isoform B
3L	NT_037436.4	4403827	4404848	+	38541	Syx17	Dmel_CG7452	NP_523926.1	301	syntaxin 17, isoform A
3L	NT_037436.4	4403827	4404983	+	38541	Syx17	Dmel_CG7452	NP_001261414.1	346	syntaxin 17, isoform B
3L	NT_037436.4	4405361	4405970	-	38542	CG15019	Dmel_CG15019	NP_647899.1	146	uncharacterized protein Dmel_CG15019, isoform A
3L	NT_037436.4	4405361	4405970	-	38542	CG15019	Dmel_CG15019	NP_001097502.1	146	uncharacterized protein Dmel_CG15019, isoform B
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_728991.1	387	diabetes and obesity regulated, isoform D
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_728990.1	387	diabetes and obesity regulated, isoform B
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_001246625.1	417	diabetes and obesity regulated, isoform H
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_001246624.1	417	diabetes and obesity regulated, isoform G
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_001097503.1	387	diabetes and obesity regulated, isoform E
3L	NT_037436.4	4418122	4419904	+	38543	DOR	Dmel_CG11347	NP_647900.1	387	diabetes and obesity regulated, isoform A
3L	NT_037436.4	4418686	4419904	+	38543	DOR	Dmel_CG11347	NP_728992.1	273	diabetes and obesity regulated, isoform C
3L	NT_037436.4	4418883	4419904	+	38543	DOR	Dmel_CG11347	NP_001097504.1	229	diabetes and obesity regulated, isoform F
3L	NT_037436.4	4423789	4426364	+	38544	CG15020	Dmel_CG15020	NP_647901.1	604	uncharacterized protein Dmel_CG15020
3L	NT_037436.4	4429652	4429846	+	38545	nAChRbeta1	Dmel_CG11348	NP_728994.1	64	nicotinic acetylcholine receptor beta1, isoform B
3L	NT_037436.4	4429652	4435339	+	38545	nAChRbeta1	Dmel_CG11348	NP_523927.2	521	nicotinic acetylcholine receptor beta1, isoform A
3L	NT_037436.4	4436889	4438206	+	38546	CG15021	Dmel_CG15021	NP_647902.1	420	uncharacterized protein Dmel_CG15021
3L	NT_037436.4	4446675	4447620	+	38547	CG12607	Dmel_CG12607	NP_001137884.1	148	uncharacterized protein Dmel_CG12607, isoform C
3L	NT_037436.4	4446675	4447800	+	38547	CG12607	Dmel_CG12607	NP_001261415.1	139	uncharacterized protein Dmel_CG12607, isoform D
3L	NT_037436.4	4446675	4447951	+	38547	CG12607	Dmel_CG12607	NP_647903.1	155	uncharacterized protein Dmel_CG12607, isoform B
3L	NT_037436.4	4457320	4458112	-	38548	CG11345	Dmel_CG11345	NP_647904.2	242	uncharacterized protein Dmel_CG11345
3L	NT_037436.4	4459298	4460247	-	38549	CG15022	Dmel_CG15022	NP_647905.1	295	uncharacterized protein Dmel_CG15022
3L	NT_037436.4	4460746	4461319	-	38550	CG15023	Dmel_CG15023	NP_001261416.1	168	uncharacterized protein Dmel_CG15023, isoform C
3L	NT_037436.4	4460746	4461319	-	38550	CG15023	Dmel_CG15023	NP_001286935.1	169	uncharacterized protein Dmel_CG15023, isoform D
3L	NT_037436.4	4460746	4461319	-	38550	CG15023	Dmel_CG15023	NP_647906.2	169	uncharacterized protein Dmel_CG15023, isoform B
3L	NT_037436.4	4463048	4463723	-	50172	CG15024	Dmel_CG15024	NP_652336.2	106	uncharacterized protein Dmel_CG15024
3L	NT_037436.4	4465226	4466624	-	317934	CG32241	Dmel_CG32241	NP_729000.2	415	uncharacterized protein Dmel_CG32241
3L	NT_037436.4	4470007	4470796	+	317939	CG32249	Dmel_CG32249	NP_729001.2	242	uncharacterized protein Dmel_CG32249
3L	NT_037436.4	4471765	4472384	+	317938	CG32248	Dmel_CG32248	NP_729002.2	182	uncharacterized protein Dmel_CG32248
3L	NT_037436.4	4473077	4475024	+	38552	CG11349	Dmel_CG11349	NP_647908.2	629	uncharacterized protein Dmel_CG11349
3L	NT_037436.4	4480331	4481375	+	38553	CG7465	Dmel_CG7465	NP_647909.1	321	CG7465
3L	NT_037436.4	4482844	4484279	+	38554	CG11350	Dmel_CG11350	NP_647910.1	456	uncharacterized protein Dmel_CG11350
3L	NT_037436.4	4485409	4490652	-	38555	CG13722	Dmel_CG13722	NP_647911.2	708	uncharacterized protein Dmel_CG13722
3L	NT_037436.4	4497208	4497658	-	38556	CG13721	Dmel_CG13721	NP_647912.1	106	uncharacterized protein Dmel_CG13721
3L	NT_037436.4	4498975	4500438	-	38557	CG13720	Dmel_CG13720	NP_647913.3	487	uncharacterized protein Dmel_CG13720
3L	NT_037436.4	4501976	4505855	-	38558	NT1	Dmel_CG42576	NP_001261418.1	1042	neurotrophin 1, isoform H
3L	NT_037436.4	4501976	4505855	-	38558	NT1	Dmel_CG42576	NP_001261417.1	1042	neurotrophin 1, isoform G
3L	NT_037436.4	4501976	4505855	-	38558	NT1	Dmel_CG42576	NP_729009.2	1042	neurotrophin 1, isoform F
3L	NT_037436.4	4502353	4505855	-	38558	NT1	Dmel_CG42576	NP_001163348.1	886	neurotrophin 1, isoform D
3L	NT_037436.4	4504400	4505855	-	38558	NT1	Dmel_CG42576	NP_001163349.1	454	neurotrophin 1, isoform E
3L	NT_037436.4	4504400	4505855	-	38558	NT1	Dmel_CG42576	NP_729011.1	454	neurotrophin 1, isoform C
3L	NT_037436.4	4504400	4505855	-	38558	NT1	Dmel_CG42576	NP_729010.1	454	neurotrophin 1, isoform B
3L	NT_037436.4	4511236	4524510	-	38559	Tie	Dmel_CG7525	NP_523928.1	1233	Tie-like receptor tyrosine kinase
3L	NT_037436.4	4535994	4538998	+	38560	CG11353	Dmel_CG11353	NP_729013.1	754	uncharacterized protein Dmel_CG11353, isoform A
3L	NT_037436.4	4535994	4538998	+	38560	CG11353	Dmel_CG11353	NP_647915.1	754	uncharacterized protein Dmel_CG11353, isoform B
3L	NT_037436.4	4539407	4541168	-	317935	CG32243	Dmel_CG32243	NP_729014.1	485	uncharacterized protein Dmel_CG32243
3L	NT_037436.4	4551098	4552566	+	38561	CG11357	Dmel_CG11357	NP_647916.1	434	uncharacterized protein Dmel_CG11357, isoform A
3L	NT_037436.4	4551098	4552566	+	38561	CG11357	Dmel_CG11357	NP_001246626.1	434	uncharacterized protein Dmel_CG11357, isoform D
3L	NT_037436.4	4551098	4552566	+	38561	CG11357	Dmel_CG11357	NP_001097506.1	434	uncharacterized protein Dmel_CG11357, isoform C
3L	NT_037436.4	4551098	4552566	+	38561	CG11357	Dmel_CG11357	NP_001097505.1	434	uncharacterized protein Dmel_CG11357, isoform B
3L	NT_037436.4	4554537	4555236	-	3772311	CG33777	Dmel_CG33777	NP_001027108.1	172	uncharacterized protein Dmel_CG33777
3L	NT_037436.4	4556169	4590355	+	38562	CG42540	Dmel_CG42540	NP_729016.2	398	uncharacterized protein Dmel_CG42540, isoform B
3L	NT_037436.4	4556169	4590355	+	38562	CG42540	Dmel_CG42540	NP_652337.2	506	uncharacterized protein Dmel_CG42540, isoform F
3L	NT_037436.4	4558002	4590355	+	38562	CG42540	Dmel_CG42540	NP_001261421.1	501	uncharacterized protein Dmel_CG42540, isoform J
3L	NT_037436.4	4558002	4590355	+	38562	CG42540	Dmel_CG42540	NP_001286936.1	405	uncharacterized protein Dmel_CG42540, isoform K
3L	NT_037436.4	4558002	4590355	+	38562	CG42540	Dmel_CG42540	NP_001261420.1	409	uncharacterized protein Dmel_CG42540, isoform I
3L	NT_037436.4	4558002	4590355	+	38562	CG42540	Dmel_CG42540	NP_001261419.1	393	uncharacterized protein Dmel_CG42540, isoform H
3L	NT_037436.4	4558002	4590355	+	38562	CG42540	Dmel_CG42540	NP_647917.3	397	uncharacterized protein Dmel_CG42540, isoform C
3L	NT_037436.4	4575272	4590355	+	38562	CG42540	Dmel_CG42540	NP_001246627.1	517	uncharacterized protein Dmel_CG42540, isoform G
3L	NT_037436.4	4575272	4590355	+	38562	CG42540	Dmel_CG42540	NP_729018.1	505	uncharacterized protein Dmel_CG42540, isoform D
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001246628.1	552	Src oncogene at 64B, isoform J
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001014564.1	552	Src oncogene at 64B, isoform E
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001014561.1	552	Src oncogene at 64B, isoform D
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001189051.1	552	Src oncogene at 64B, isoform H
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001014563.1	552	Src oncogene at 64B, isoform F
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001014562.1	552	Src oncogene at 64B, isoform C
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_524934.2	552	Src oncogene at 64B, isoform B
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001286937.1	553	Src oncogene at 64B, isoform K
3L	NT_037436.4	4594641	4598418	-	48973	Src64B	Dmel_CG7524	NP_001246629.1	552	Src oncogene at 64B, isoform I
3L	NT_037436.4	4621265	4622962	+	317936	CG32246	Dmel_CG32246	NP_729020.2	565	uncharacterized protein Dmel_CG32246
3L	NT_037436.4	4626940	4629115	+	38565	HDAC1	Dmel_CG7471	NP_647918.2	521	histone deacetylase 1
3L	NT_037436.4	4629816	4675904	-	43923	axo	Dmel_CG43225	NP_001261423.1	2179	axotactin, isoform G
3L	NT_037436.4	4629816	4675904	-	43923	axo	Dmel_CG43225	NP_001246631.1	2179	axotactin, isoform C
3L	NT_037436.4	4630323	4675904	-	43923	axo	Dmel_CG43225	NP_524656.5	2047	axotactin, isoform I
3L	NT_037436.4	4634436	4634789	-	38567	CG13716	Dmel_CG13716	NP_647920.1	117	uncharacterized protein Dmel_CG13716
3L	NT_037436.4	4637434	4675904	-	43923	axo	Dmel_CG43225	NP_001261422.1	2147	axotactin, isoform F
3L	NT_037436.4	4637434	4675904	-	43923	axo	Dmel_CG43225	NP_001246630.1	2148	axotactin, isoform B
3L	NT_037436.4	4642587	4675904	-	43923	axo	Dmel_CG43225	NP_001261424.1	2070	axotactin, isoform H
3L	NT_037436.4	4642587	4675904	-	43923	axo	Dmel_CG43225	NP_001246632.1	2070	axotactin, isoform D
3L	NT_037436.4	4648672	4650135	+	326203	CG32238	Dmel_CG32238	NP_729025.1	487	uncharacterized protein Dmel_CG32238
3L	NT_037436.4	4666083	4667240	-	249170	CG32236	Dmel_CG32236	NP_729026.1	385	uncharacterized protein Dmel_CG32236
3L	NT_037436.4	4677851	4678117	+	5740465	CG34266	Dmel_CG34266	NP_001097507.1	88	uncharacterized protein Dmel_CG34266
3L	NT_037436.4	4687796	4688701	-	38571	CG7514	Dmel_CG7514	NP_647923.1	301	CG7514
3L	NT_037436.4	4689054	4689989	-	38572	CG18418	Dmel_CG18418	NP_647924.2	311	uncharacterized protein Dmel_CG18418
3L	NT_037436.4	4694323	4694739	-	38573	CG15876	Dmel_CG15876	NP_647925.1	138	uncharacterized protein Dmel_CG15876
3L	NT_037436.4	4697679	4697978	+	59233	CG13713	Dmel_CG13713	NP_652709.1	99	uncharacterized protein Dmel_CG13713
3L	NT_037436.4	4709503	4709856	-	38574	CG13712	Dmel_CG13712	NP_647926.1	117	uncharacterized protein Dmel_CG13712
3L	NT_037436.4	4752550	4753613	-	38575	CG12493	Dmel_CG12493	NP_647927.3	296	uncharacterized protein Dmel_CG12493, isoform A
3L	NT_037436.4	4752550	4753613	-	38575	CG12493	Dmel_CG12493	NP_001261426.1	293	uncharacterized protein Dmel_CG12493, isoform B
3L	NT_037436.4	4758029	4758412	+	38576	CG13711	Dmel_CG13711	NP_647928.1	127	uncharacterized protein Dmel_CG13711
3L	NT_037436.4	4764890	4795932	+	38578	RhoGEF64C	Dmel_CG32239	NP_001261425.1	1984	Rho guanine nucleotide exchange factor at 64C, isoform B
3L	NT_037436.4	4764890	4795932	+	38578	RhoGEF64C	Dmel_CG32239	NP_729032.1	1984	Rho guanine nucleotide exchange factor at 64C, isoform A
3L	NT_037436.4	4803170	4805257	-	38579	CG7509	Dmel_CG7509	NP_647931.1	615	CG7509
3L	NT_037436.4	4806171	4807328	-	59169	CG18808	Dmel_CG18808	NP_652668.1	385	uncharacterized protein Dmel_CG18808
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261429.1	4652	dynein heavy chain 64C, isoform F
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261428.1	4647	dynein heavy chain 64C, isoform E
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_523929.2	4639	dynein heavy chain 64C, isoform A
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261427.1	4651	dynein heavy chain 64C, isoform D
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261430.1	4648	dynein heavy chain 64C, isoform G
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_729034.2	4638	dynein heavy chain 64C, isoform C
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261432.1	4661	dynein heavy chain 64C, isoform I
3L	NT_037436.4	4807667	4825571	-	38580	Dhc64C	Dmel_CG7507	NP_001261431.1	4660	dynein heavy chain 64C, isoform H
3L	NT_037436.4	4825953	4828728	+	38581	LeuRS-m	Dmel_CG7479	NP_647932.1	869	Leucyl-tRNA synthetase, mitochondrial
3L	NT_037436.4	4829092	4833074	-	38582	CG13708	Dmel_CG13708	NP_001261433.1	1301	uncharacterized protein Dmel_CG13708, isoform B
3L	NT_037436.4	4829092	4833074	-	38582	CG13708	Dmel_CG13708	NP_647933.1	1301	uncharacterized protein Dmel_CG13708, isoform A
3L	NT_037436.4	4838079	4838381	-	38583	CG13707	Dmel_CG13707	NP_647934.2	100	uncharacterized protein Dmel_CG13707, isoform C
3L	NT_037436.4	4838079	4839900	-	38583	CG13707	Dmel_CG13707	NP_001246634.1	163	uncharacterized protein Dmel_CG13707, isoform B
3L	NT_037436.4	4838079	4838381	-	38583	CG13707	Dmel_CG13707	NP_001246633.1	100	uncharacterized protein Dmel_CG13707, isoform D
3L	NT_037436.4	4849590	4852401	-	38584	CG32237	Dmel_CG32237	NP_729037.1	911	uncharacterized protein Dmel_CG32237
3L	NT_037436.4	4859847	4860098	-	251916	CG32235	Dmel_CG32235	NP_729038.1	83	uncharacterized protein Dmel_CG32235
3L	NT_037436.4	4861460	4864288	+	38586	Dnah3	Dmel_CG17150	NP_001137885.1	390	dynein, axonemal, heavy chain 3, isoform E
3L	NT_037436.4	4861460	4895291	+	38586	Dnah3	Dmel_CG17150	NP_647937.2	4385	dynein, axonemal, heavy chain 3, isoform D
3L	NT_037436.4	4896916	4898285	+	38587	CG13705	Dmel_CG13705	NP_647938.1	432	uncharacterized protein Dmel_CG13705
3L	NT_037436.4	4898997	4900695	+	38588	CG13704	Dmel_CG13704	NP_647939.1	136	uncharacterized protein Dmel_CG13704
3L	NT_037436.4	4910694	4919134	+	38589	Rh50	Dmel_CG7499	NP_001261434.1	460	Rh50, isoform B
3L	NT_037436.4	4910694	4919134	+	38589	Rh50	Dmel_CG7499	NP_001286938.1	460	Rh50, isoform C
3L	NT_037436.4	4910694	4918862	+	38589	Rh50	Dmel_CG7499	NP_647940.1	449	Rh50, isoform A
3L	NT_037436.4	4939268	4956845	-	38590	Con	Dmel_CG7503	NP_523930.3	691	connectin, isoform A
3L	NT_037436.4	4939268	4956845	-	38590	Con	Dmel_CG7503	NP_001246635.1	691	connectin, isoform B
3L	NT_037436.4	4980095	4980637	-	38591	CG17030	Dmel_CG17030	NP_647941.1	180	uncharacterized protein Dmel_CG17030
3L	NT_037436.4	4993950	4996877	-	317930	CG32232	Dmel_CG32232	NP_729045.1	975	uncharacterized protein Dmel_CG32232
3L	NT_037436.4	5011597	5012095	-	38592	ATPsynCF6L	Dmel_CG12027	NP_647942.1	147	ATP synthase, coupling factor 6-like
3L	NT_037436.4	5129674	5130240	+	38604	CG4597	Dmel_CG4597	NP_647952.1	188	CG4597
3L	NT_037436.4	5131604	5131933	+	50315	CG15212	Dmel_CG15212	NP_652458.1	63	uncharacterized protein Dmel_CG15212
3L	NT_037436.4	5132898	5133145	-	50316	CG15213	Dmel_CG15213	NP_652459.1	62	uncharacterized protein Dmel_CG15213
3L	NT_037436.4	5134391	5135434	+	38603	CG4603	Dmel_CG4603	NP_647951.2	347	CG4603, isoform A
3L	NT_037436.4	5134391	5135434	+	38603	CG4603	Dmel_CG4603	NP_001261436.1	347	CG4603, isoform C
3L	NT_037436.4	5134391	5135506	+	38603	CG4603	Dmel_CG4603	NP_001261435.1	371	CG4603, isoform B
3L	NT_037436.4	5135840	5136233	-	38602	CG10674	Dmel_CG10674	NP_647950.1	108	uncharacterized protein Dmel_CG10674
3L	NT_037436.4	5136472	5138639	+	38601	CG4611	Dmel_CG4611	NP_647949.1	703	CG4611
3L	NT_037436.4	5138680	5139354	-	38600	Prpk	Dmel_CG10673	NP_647948.1	224	p53-related protein kinase
3L	NT_037436.4	5139745	5140383	+	38599	CHMP2B	Dmel_CG4618	NP_647947.1	212	charged multivesicular body protein 2b
3L	NT_037436.4	5140472	5141550	-	38598	CG10672	Dmel_CG10672	NP_647946.1	317	uncharacterized protein Dmel_CG10672
3L	NT_037436.4	5142305	5144056	+	38597	Gdap1	Dmel_CG4623	NP_001261437.1	326	Gdap1, isoform B
3L	NT_037436.4	5142305	5144056	+	38597	Gdap1	Dmel_CG4623	NP_647945.1	327	Gdap1, isoform A
3L	NT_037436.4	5142305	5144121	+	38597	Gdap1	Dmel_CG4623	NP_001286939.1	320	Gdap1, isoform C
3L	NT_037436.4	5144396	5145726	-	38596	CG10671	Dmel_CG10671	NP_647944.2	423	uncharacterized protein Dmel_CG10671, isoform A
3L	NT_037436.4	5144396	5145897	-	38596	CG10671	Dmel_CG10671	NP_729053.2	480	uncharacterized protein Dmel_CG10671, isoform B
3L	NT_037436.4	5146195	5149755	+	38595	AlaRS-m	Dmel_CG4633	NP_523932.2	1012	Alanyl-tRNA synthetase, mitochondrial
3L	NT_037436.4	5149866	5152301	-	38594	Gen	Dmel_CG10670	NP_647943.2	726	XPG-like endonuclease
3L	NT_037436.4	5152846	5154457	+	38593	Srp54k	Dmel_CG4659	NP_523931.1	508	signal recognition particle protein 54k
3L	NT_037436.4	5162467	5276322	-	38605	shep	Dmel_CG32423	NP_001246636.1	590	alan shepard, isoform F
3L	NT_037436.4	5162467	5170314	-	38605	shep	Dmel_CG32423	NP_001261439.1	371	alan shepard, isoform H
3L	NT_037436.4	5162467	5276322	-	38605	shep	Dmel_CG32423	NP_729054.3	578	alan shepard, isoform A
3L	NT_037436.4	5162467	5170314	-	38605	shep	Dmel_CG32423	NP_001163350.1	379	alan shepard, isoform E
3L	NT_037436.4	5162467	5170314	-	38605	shep	Dmel_CG32423	NP_001261438.1	379	alan shepard, isoform G
3L	NT_037436.4	5162467	5219168	-	38605	shep	Dmel_CG32423	NP_729056.1	499	alan shepard, isoform D
3L	NT_037436.4	5162467	5170314	-	38605	shep	Dmel_CG32423	NP_729057.3	377	alan shepard, isoform I
3L	NT_037436.4	5162467	5219168	-	38605	shep	Dmel_CG32423	NP_729055.1	499	alan shepard, isoform B
3L	NT_037436.4	5234627	5236510	+	38608	CG4669	Dmel_CG4669	NP_647956.2	611	CG4669
3L	NT_037436.4	5343996	5346096	-	38610	lama	Dmel_CG10645	NP_523933.3	658	lamina ancestor, isoform B
3L	NT_037436.4	5343996	5346096	-	38610	lama	Dmel_CG10645	NP_001261440.1	658	lamina ancestor, isoform D
3L	NT_037436.4	5343996	5346096	-	38610	lama	Dmel_CG10645	NP_729060.2	658	lamina ancestor, isoform C
3L	NT_037436.4	5343996	5346096	-	38610	lama	Dmel_CG10645	NP_729059.2	658	lamina ancestor, isoform A
3L	NT_037436.4	5357221	5359254	-	38611	Klp64D	Dmel_CG10642	NP_523934.1	677	Kinesin-like protein at 64D
3L	NT_037436.4	5360340	5362330	+	38612	Cyt-c1	Dmel_CG4769	NP_001246637.1	307	cytochrome c1, isoform B
3L	NT_037436.4	5360340	5362330	+	38612	Cyt-c1	Dmel_CG4769	NP_647958.1	307	cytochrome c1, isoform A
3L	NT_037436.4	5363875	5366156	-	38613	Uev1A	Dmel_CG10640	NP_647959.1	145	Ubiquitin-conjugating enzyme variant 1A, isoform A
3L	NT_037436.4	5363875	5364987	-	38613	Uev1A	Dmel_CG10640	NP_729062.1	103	Ubiquitin-conjugating enzyme variant 1A, isoform B
3L	NT_037436.4	5363875	5366156	-	38613	Uev1A	Dmel_CG10640	NP_001286940.1	145	Ubiquitin-conjugating enzyme variant 1A, isoform C
3L	NT_037436.4	5366599	5367318	+	38614	Membrin	Dmel_CG4780	NP_647960.1	216	membrin
3L	NT_037436.4	5367403	5367944	-	38615	Pfdn4	Dmel_CG10635	NP_647961.1	138	prefoldin 4
3L	NT_037436.4	5378786	5382821	-	38616	Ir64a	Dmel_CG10633	NP_647962.1	859	ionotropic receptor 64a
3L	NT_037436.4	5429514	5439592	+	5740816	DIP-delta	Dmel_CG34391	NP_001097508.2	469	Dpr-interacting protein delta, isoform D
3L	NT_037436.4	5429514	5439592	+	5740816	DIP-delta	Dmel_CG34391	NP_001261441.1	469	Dpr-interacting protein delta, isoform E
3L	NT_037436.4	5436260	5439592	+	5740816	DIP-delta	Dmel_CG34391	NP_001137886.1	189	Dpr-interacting protein delta, isoform B
3L	NT_037436.4	5479850	5483663	+	38619	CG4835	Dmel_CG4835	NP_647965.3	1224	CG4835
3L	NT_037436.4	5497706	5498848	-	38620	blanks	Dmel_CG10630	NP_647966.1	324	blanks
3L	NT_037436.4	5503582	5510820	-	5740152	CG34342	Dmel_CG34342	NP_001097509.3	572	uncharacterized protein Dmel_CG34342, isoform D
3L	NT_037436.4	5505596	5510820	-	5740152	CG34342	Dmel_CG34342	NP_001163351.2	322	uncharacterized protein Dmel_CG34342, isoform E
3L	NT_037436.4	5513189	5518577	-	38622	Lkr	Dmel_CG10626	NP_647968.3	542	leucokinin receptor
3L	NT_037436.4	5534382	5535657	-	38623	CG13285	Dmel_CG13285	NP_001246638.1	154	uncharacterized protein Dmel_CG13285, isoform B
3L	NT_037436.4	5534825	5535657	-	38623	CG13285	Dmel_CG13285	NP_647969.1	198	uncharacterized protein Dmel_CG13285, isoform A
3L	NT_037436.4	5538971	5550807	-	38624	frm	Dmel_CG10625	NP_001137887.1	1180	farmer, isoform H
3L	NT_037436.4	5538971	5550807	-	38624	frm	Dmel_CG10625	NP_001137889.1	752	farmer, isoform J
3L	NT_037436.4	5538971	5550807	-	38624	frm	Dmel_CG10625	NP_001137888.1	766	farmer, isoform I
3L	NT_037436.4	5540223	5550807	-	38624	frm	Dmel_CG10625	NP_647970.1	268	farmer, isoform A
3L	NT_037436.4	5540223	5550807	-	38624	frm	Dmel_CG10625	NP_729075.1	682	farmer, isoform C
3L	NT_037436.4	5540223	5550807	-	38624	frm	Dmel_CG10625	NP_001097510.1	652	farmer, isoform E
3L	NT_037436.4	5540223	5550807	-	38624	frm	Dmel_CG10625	NP_729073.1	268	farmer, isoform D
3L	NT_037436.4	5540223	5550807	-	38624	frm	Dmel_CG10625	NP_729074.1	682	farmer, isoform B
3L	NT_037436.4	5544964	5550807	-	38624	frm	Dmel_CG10625	NP_001137890.1	53	farmer, isoform K
3L	NT_037436.4	5544964	5550807	-	38624	frm	Dmel_CG10625	NP_001097512.1	53	farmer, isoform G
3L	NT_037436.4	5560752	5561495	-	46187	sinu	Dmel_CG10624	NP_647971.3	247	sinuous
3L	NT_037436.4	5561902	5563543	-	44001	Sucb	Dmel_CG10622	NP_001286941.1	416	sucb, isoform C
3L	NT_037436.4	5561902	5563543	-	44001	Sucb	Dmel_CG10622	NP_651963.1	416	sucb, isoform A
3L	NT_037436.4	5563861	5564828	+	44002	Sras	Dmel_CG4852	NP_524673.3	302	severas
3L	NT_037436.4	5565625	5565864	+	38628	bc10	Dmel_CG4867	NP_647972.1	79	bc10
3L	NT_037436.4	5567581	5576933	-	38629	Msr-110	Dmel_CG10596	NP_001286942.1	605	Msr-110, isoform D
3L	NT_037436.4	5567581	5576933	-	38629	Msr-110	Dmel_CG10596	NP_729077.1	617	Msr-110, isoform A
3L	NT_037436.4	5567581	5575086	-	38629	Msr-110	Dmel_CG10596	NP_729078.1	625	Msr-110, isoform C
3L	NT_037436.4	5567581	5576933	-	38629	Msr-110	Dmel_CG10596	NP_647973.1	608	Msr-110, isoform B
3L	NT_037436.4	5584007	5589916	+	38630	l(3)psg2	Dmel_CG5146	NP_647974.1	1929	lethal (3) persistent salivary gland 2
3L	NT_037436.4	5590587	5592218	-	38631	spo	Dmel_CG10594	NP_001286943.1	543	spook, isoform C
3L	NT_037436.4	5590587	5592218	-	38631	spo	Dmel_CG10594	NP_647975.2	543	spook, isoform A
3L	NT_037436.4	5592853	5595210	-	38632	CG10592	Dmel_CG10592	NP_647976.1	524	uncharacterized protein Dmel_CG10592
3L	NT_037436.4	5595586	5597139	+	38633	CG5150	Dmel_CG5150	NP_001286944.1	517	CG5150, isoform B
3L	NT_037436.4	5595586	5597139	+	38633	CG5150	Dmel_CG5150	NP_647977.1	517	CG5150, isoform A
3L	NT_037436.4	5598658	5599657	-	38634	CG10591	Dmel_CG10591	NP_647978.1	312	uncharacterized protein Dmel_CG10591
3L	NT_037436.4	5601789	5603798	-	38635	TM9SF3	Dmel_CG10590	NP_647979.1	592	transmembrane 9 superfamily protein member 3
3L	NT_037436.4	5604894	5606816	+	38636	mthl2	Dmel_CG17795	NP_788462.2	518	methuselah-like 2
3L	NT_037436.4	5607281	5608233	-	38637	Eaf6	Dmel_CG12756	NP_647981.1	225	Esa1-associated factor 6
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_001286945.1	1203	Blimp-1, isoform F
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_647982.1	1203	Blimp-1, isoform A
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_001261445.1	1203	Blimp-1, isoform E
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_001261444.1	1203	Blimp-1, isoform D
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_001261442.1	1216	Blimp-1, isoform B
3L	NT_037436.4	5644213	5648814	+	38638	Blimp-1	Dmel_CG5249	NP_001261443.1	1216	Blimp-1, isoform C
3L	NT_037436.4	5654980	5657119	+	38639	lin-28	Dmel_CG17334	NP_647983.1	195	lin-28
3L	NT_037436.4	5659879	5662154	-	38640	Sse	Dmel_CG10583	NP_523935.1	634	separase
3L	NT_037436.4	5665971	5667920	+	30522409	CG46320	Dmel_CG46320	NP_001334710.1	54	uncharacterized protein Dmel_CG46320, isoform B
3L	NT_037436.4	5665971	5667920	+	30522409	CG46320	Dmel_CG46320	NP_001334709.1	54	uncharacterized protein Dmel_CG46320, isoform A
3L	NT_037436.4	5668035	5742048	+	30522409	CG46320	Dmel_CG46320	NP_001334675.1	2676	still life, isoform Q
3L	NT_037436.4	5668035	5742222	+	30522409	CG46320	Dmel_CG46320	NP_001261446.1	2734	still life, isoform J
3L	NT_037436.4	5668035	5746553	+	30522409	CG46320	Dmel_CG46320	NP_001334674.1	2088	still life, isoform O
3L	NT_037436.4	5668035	5746553	+	30522409	CG46320	Dmel_CG46320	NP_729084.1	2072	still life, isoform B
3L	NT_037436.4	5668035	5746553	+	30522409	CG46320	Dmel_CG46320	NP_001097518.2	2081	still life, isoform N
3L	NT_037436.4	5668035	5742048	+	30522409	CG46320	Dmel_CG46320	NP_001097517.1	2657	still life, isoform F
3L	NT_037436.4	5668035	5746553	+	30522409	CG46320	Dmel_CG46320	NP_001097519.2	2072	still life, isoform I
3L	NT_037436.4	5668035	5746553	+	30522409	CG46320	Dmel_CG46320	NP_001261448.1	2091	still life, isoform M
3L	NT_037436.4	5673217	5742048	+	30522409	CG46320	Dmel_CG46320	NP_001286947.1	2476	still life, isoform P
3L	NT_037436.4	5696691	5742048	+	30522409	CG46320	Dmel_CG46320	NP_001097516.3	2646	still life, isoform K
3L	NT_037436.4	5696691	5746553	+	30522409	CG46320	Dmel_CG46320	NP_996000.1	2061	still life, isoform C
3L	NT_037436.4	5696691	5746553	+	30522409	CG46320	Dmel_CG46320	NP_524647.2	2052	still life, isoform A
3L	NT_037436.4	5703943	5746553	+	30522409	CG46320	Dmel_CG46320	NP_001261447.1	1270	still life, isoform L
3L	NT_037436.4	5713432	5713710	+	19835398	CG44521	Dmel_CG44521	NP_001286948.1	92	uncharacterized protein Dmel_CG44521
3L	NT_037436.4	5750589	5751593	-	38643	DnaJ-1	Dmel_CG10578	NP_729086.1	334	DnaJ-like-1, isoform B
3L	NT_037436.4	5750589	5751593	-	38643	DnaJ-1	Dmel_CG10578	NP_523936.2	334	DnaJ-like-1, isoform A
3L	NT_037436.4	5756245	5761384	+	38644	Usp47	Dmel_CG5486	NP_523937.2	1556	ubiquitin specific protease 47, isoform B
3L	NT_037436.4	5756245	5761384	+	38644	Usp47	Dmel_CG5486	NP_996001.2	1538	ubiquitin specific protease 47, isoform D
3L	NT_037436.4	5756245	5761384	+	38644	Usp47	Dmel_CG5486	NP_729087.1	1556	ubiquitin specific protease 47, isoform A
3L	NT_037436.4	5762411	5765428	-	38645	CG10576	Dmel_CG10576	NP_001286949.1	391	uncharacterized protein Dmel_CG10576, isoform D
3L	NT_037436.4	5762411	5765428	-	38645	CG10576	Dmel_CG10576	NP_647984.1	391	uncharacterized protein Dmel_CG10576, isoform A
3L	NT_037436.4	5762411	5765428	-	38645	CG10576	Dmel_CG10576	NP_729089.2	391	uncharacterized protein Dmel_CG10576, isoform C
3L	NT_037436.4	5766010	5766989	+	38646	Txl	Dmel_CG5495	NP_523938.2	287	Thioredoxin-like
3L	NT_037436.4	5767136	5768759	-	38647	Ppat-Dpck	Dmel_CG10575	NP_647985.1	518	bifunctional phosphopantetheine adenylyltransferase - Dephospho-CoA kinase
3L	NT_037436.4	5769603	5774611	+	38648	scny	Dmel_CG5505	NP_001246640.1	976	scrawny, isoform H
3L	NT_037436.4	5769603	5775572	+	38648	scny	Dmel_CG5505	NP_729092.1	1038	scrawny, isoform D
3L	NT_037436.4	5769603	5774611	+	38648	scny	Dmel_CG5505	NP_001246639.1	976	scrawny, isoform G
3L	NT_037436.4	5771311	5775572	+	38648	scny	Dmel_CG5505	NP_729094.1	948	scrawny, isoform C
3L	NT_037436.4	5771311	5774611	+	38648	scny	Dmel_CG5505	NP_729093.2	886	scrawny, isoform I
3L	NT_037436.4	5771497	5775572	+	38648	scny	Dmel_CG5505	NP_729095.1	968	scrawny, isoform B
3L	NT_037436.4	5771497	5774611	+	38648	scny	Dmel_CG5505	NP_647986.3	906	scrawny, isoform J
3L	NT_037436.4	5776412	5777265	-	326214	vito	Dmel_CG32418	NP_729096.1	264	viriato
3L	NT_037436.4	5777764	5779541	-	38649	Myt1	Dmel_CG32417	NP_647987.2	533	Myt1
3L	NT_037436.4	5780111	5781001	+	3771920	PGRP-LD	Dmel_CG33717	NP_001334670.1	173	Pmi, isoform C
3L	NT_037436.4	5780111	5781001	+	3771920	PGRP-LD	Dmel_CG33717	NP_001303405.1	173	Pmi, isoform E
3L	NT_037436.4	5780111	5781001	+	3771920	PGRP-LD	Dmel_CG33717	NP_001027110.2	173	Pmi, isoform F
3L	NT_037436.4	5780111	5781581	+	3771920	PGRP-LD	Dmel_CG33717	NP_001027109.2	182	Pmi, isoform D
3L	NT_037436.4	5781692	5783243	+	3771920	PGRP-LD	Dmel_CG33717	NP_001027112.1	282	peptidoglycan recognition protein LD, isoform B
3L	NT_037436.4	5781692	5783243	+	3771920	PGRP-LD	Dmel_CG33717	NP_001027111.1	282	peptidoglycan recognition protein LD, isoform C
3L	NT_037436.4	5781692	5783243	+	3771920	PGRP-LD	Dmel_CG33717	NP_001027113.1	282	peptidoglycan recognition protein LD, isoform A
3L	NT_037436.4	5781831	5783243	+	3771920	PGRP-LD	Dmel_CG33717	NP_001137893.1	327	peptidoglycan recognition protein LD, isoform D
3L	NT_037436.4	5783481	5784455	-	38651	Cralbp	Dmel_CG10546	NP_523939.1	324	cellular retinaldehyde binding protein
3L	NT_037436.4	5790545	5793845	-	38652	Bre1	Dmel_CG10542	NP_647989.2	1044	Bre1, isoform A
3L	NT_037436.4	5790545	5793845	-	38652	Bre1	Dmel_CG10542	NP_001286950.1	1044	Bre1, isoform B
3L	NT_037436.4	5794564	5796302	-	38653	Tektin-C	Dmel_CG10541	NP_001261449.1	421	tektin C, isoform D
3L	NT_037436.4	5794564	5796302	-	38653	Tektin-C	Dmel_CG10541	NP_523940.2	421	tektin C, isoform A
3L	NT_037436.4	5794564	5796302	-	38653	Tektin-C	Dmel_CG10541	NP_001097520.2	421	tektin C, isoform C
3L	NT_037436.4	5800430	5810400	-	38654	S6k	Dmel_CG10539	NP_001261450.1	490	ribosomal protein S6 kinase, isoform B
3L	NT_037436.4	5800430	5810400	-	38654	S6k	Dmel_CG10539	NP_523941.2	490	ribosomal protein S6 kinase, isoform A
3L	NT_037436.4	5803033	5805642	+	318020	CG42272	Dmel_CG42272	NP_729101.2	584	uncharacterized protein Dmel_CG42272, isoform C
3L	NT_037436.4	5804279	5805642	+	318020	CG42272	Dmel_CG42272	NP_729102.2	434	uncharacterized protein Dmel_CG42272, isoform E
3L	NT_037436.4	5811079	5812075	+	38655	kri	Dmel_CG5537	NP_001261451.1	261	krishah, isoform B
3L	NT_037436.4	5811079	5811929	+	38655	kri	Dmel_CG5537	NP_001261452.1	261	krishah, isoform C
3L	NT_037436.4	5811079	5811929	+	38655	kri	Dmel_CG5537	NP_647990.1	261	krishah, isoform A
3L	NT_037436.4	5812250	5813014	-	38656	mad2	Dmel_CG17498	NP_647991.1	207	mad2
3L	NT_037436.4	5813434	5843558	-	38657	vn	Dmel_CG10491	NP_001014565.2	618	vein, isoform C
3L	NT_037436.4	5814815	5843558	-	38657	vn	Dmel_CG10491	NP_523942.2	623	vein, isoform A
3L	NT_037436.4	5871598	5873342	+	38658	CG5568	Dmel_CG5568	NP_647992.1	545	CG5568
3L	NT_037436.4	5873633	5875379	+	38659	CG18586	Dmel_CG18586	NP_647993.2	545	uncharacterized protein Dmel_CG18586, isoform B
3L	NT_037436.4	5873633	5875379	+	38659	CG18586	Dmel_CG18586	NP_001261453.1	536	uncharacterized protein Dmel_CG18586, isoform C
3L	NT_037436.4	5882407	5883792	+	38660	CG13287	Dmel_CG13287	NP_647994.1	461	uncharacterized protein Dmel_CG13287, isoform A
3L	NT_037436.4	5882407	5883819	+	38660	CG13287	Dmel_CG13287	NP_001261454.1	470	uncharacterized protein Dmel_CG13287, isoform B
3L	NT_037436.4	5895745	5897379	-	38661	DNApol-epsilon58	Dmel_CG10489	NP_647995.1	525	DNA polymerase epsilon 58kD subunit
3L	NT_037436.4	5897648	5899395	+	38662	CG5592	Dmel_CG5592	NP_647996.1	540	CG5592
3L	NT_037436.4	5899599	5900826	+	318016	CG32409	Dmel_CG32409	NP_729108.2	349	uncharacterized protein Dmel_CG32409
3L	NT_037436.4	5900918	5902421	-	38663	QC	Dmel_CG32412	NP_729109.1	340	glutaminyl cyclase
3L	NT_037436.4	5902887	5904001	-	318018	CG32413	Dmel_CG32413	NP_001097521.2	314	uncharacterized protein Dmel_CG32413
3L	NT_037436.4	5904378	5906699	-	38664	CG10486	Dmel_CG10486	NP_647998.2	706	uncharacterized protein Dmel_CG10486, isoform B
3L	NT_037436.4	5905664	5906699	-	38664	CG10486	Dmel_CG10486	NP_001246641.1	327	uncharacterized protein Dmel_CG10486, isoform C
3L	NT_037436.4	5907805	5909749	+	38665	CG13288	Dmel_CG13288	NP_001261455.1	273	uncharacterized protein Dmel_CG13288, isoform C
3L	NT_037436.4	5907805	5916933	+	38665	CG13288	Dmel_CG13288	NP_001097522.1	250	uncharacterized protein Dmel_CG13288, isoform B
3L	NT_037436.4	5918016	5921205	-	38666	CG10483	Dmel_CG10483	NP_648000.1	671	uncharacterized protein Dmel_CG10483
3L	NT_037436.4	5922646	5923507	+	38667	CG32407	Dmel_CG32407	NP_001261456.1	241	uncharacterized protein Dmel_CG32407, isoform B
3L	NT_037436.4	5922646	5923507	+	38667	CG32407	Dmel_CG32407	NP_729113.1	241	uncharacterized protein Dmel_CG32407, isoform A
3L	NT_037436.4	5924105	5929286	+	38668	CG33523	Dmel_CG33523	NP_001014569.1	498	uncharacterized protein Dmel_CG33523, isoform D
3L	NT_037436.4	5924105	5926793	+	38668	CG33523	Dmel_CG33523	NP_001246642.1	285	uncharacterized protein Dmel_CG33523, isoform E
3L	NT_037436.4	5924105	5929754	+	38668	CG33523	Dmel_CG33523	NP_001261457.1	654	uncharacterized protein Dmel_CG33523, isoform F
3L	NT_037436.4	5927058	5929286	+	38668	CG33523	Dmel_CG33523	NP_001014566.1	234	uncharacterized protein Dmel_CG33523, isoform A
3L	NT_037436.4	5927881	5929286	+	38668	CG33523	Dmel_CG33523	NP_001014567.1	240	uncharacterized protein Dmel_CG33523, isoform C
3L	NT_037436.4	5928539	5929286	+	38668	CG33523	Dmel_CG33523	NP_001014568.1	206	uncharacterized protein Dmel_CG33523, isoform B
3L	NT_037436.4	5930579	5932281	-	38669	Rcc1	Dmel_CG10480	NP_523943.1	547	regulator of chromosome condensation 1, isoform A
3L	NT_037436.4	5930579	5932281	-	38669	Rcc1	Dmel_CG10480	NP_729119.1	547	regulator of chromosome condensation 1, isoform C
3L	NT_037436.4	5930579	5932281	-	38669	Rcc1	Dmel_CG10480	NP_729118.1	547	regulator of chromosome condensation 1, isoform B
3L	NT_037436.4	5933770	5934678	-	3885637	CG33993	Dmel_CG33993	NP_001163352.1	258	uncharacterized protein Dmel_CG33993, isoform B
3L	NT_037436.4	5933770	5937968	-	3885637	CG33993	Dmel_CG33993	NP_001033991.1	421	uncharacterized protein Dmel_CG33993, isoform A
3L	NT_037436.4	5967811	5975737	-	38674	CG10479	Dmel_CG10479	NP_648006.1	378	uncharacterized protein Dmel_CG10479, isoform A
3L	NT_037436.4	5967811	5975737	-	38674	CG10479	Dmel_CG10479	NP_001261458.1	379	uncharacterized protein Dmel_CG10479, isoform B
3L	NT_037436.4	6009556	6010951	-	38675	alphaKap4	Dmel_CG10478	NP_648007.1	442	alpha Karyopherin-4
3L	NT_037436.4	6019337	6025627	+	38677	PVRAP	Dmel_CG32406	NP_729124.1	474	PVR adaptor protein
3L	NT_037436.4	6033735	6034605	-	38679	CG10477	Dmel_CG10477	NP_648010.1	272	uncharacterized protein Dmel_CG10477, isoform A
3L	NT_037436.4	6033735	6034605	-	38679	CG10477	Dmel_CG10477	NP_001303385.1	272	uncharacterized protein Dmel_CG10477, isoform B
3L	NT_037436.4	6035243	6036111	+	38680	yip7	Dmel_CG6457	NP_523944.1	270	yippee interacting protein 7
3L	NT_037436.4	6037111	6038070	+	38681	CG6462	Dmel_CG6462	NP_648011.1	319	CG6462
3L	NT_037436.4	6039196	6040088	+	38682	Jon65Aiv	Dmel_CG6467	NP_648012.1	271	jonah 65Aiv
3L	NT_037436.4	6050777	6051660	+	38683	Jon65Aiii	Dmel_CG6483	NP_648013.1	274	jonah 65Aiii
3L	NT_037436.4	6052350	6053191	+	38684	Jon65Aii	Dmel_CG6580	NP_648014.1	259	jonah 65Aii
3L	NT_037436.4	6053628	6054416	-	38685	Jon65Ai	Dmel_CG10475	NP_648015.1	262	jonah 65Ai, isoform A
3L	NT_037436.4	6053628	6054416	-	38685	Jon65Ai	Dmel_CG10475	NP_001286951.1	262	jonah 65Ai, isoform B
3L	NT_037436.4	6055608	6056560	+	44785	tant	Dmel_CG6586	NP_524782.2	299	tantalus, isoform A
3L	NT_037436.4	6055608	6056560	+	44785	tant	Dmel_CG6586	NP_001261460.1	299	tantalus, isoform B
3L	NT_037436.4	6059946	6061378	+	38687	CG6592	Dmel_CG6592	NP_648016.1	438	CG6592
3L	NT_037436.4	6061418	6062893	-	38688	CG10472	Dmel_CG10472	NP_648017.1	290	uncharacterized protein Dmel_CG10472
3L	NT_037436.4	6066495	6071371	+	38689	CG42269	Dmel_CG42269	NP_648019.2	662	uncharacterized protein Dmel_CG42269
3L	NT_037436.4	6072144	6073454	+	38691	CG6602	Dmel_CG6602	NP_648020.1	436	CG6602
3L	NT_037436.4	6073542	6075117	-	38692	CG13295	Dmel_CG13295	NP_648021.1	485	uncharacterized protein Dmel_CG13295
3L	NT_037436.4	6075640	6076052	+	38693	CG6610	Dmel_CG6610	NP_001261461.1	91	CG6610, isoform B
3L	NT_037436.4	6075640	6076052	+	38693	CG6610	Dmel_CG6610	NP_001261462.1	91	CG6610, isoform C
3L	NT_037436.4	6075640	6076052	+	38693	CG6610	Dmel_CG6610	NP_648022.1	91	CG6610, isoform A
3L	NT_037436.4	6077040	6081273	+	38694	ssp6	Dmel_CG6619	NP_648023.2	866	short spindle 6, isoform A
3L	NT_037436.4	6077040	6081273	+	38694	ssp6	Dmel_CG6619	NP_001286952.1	866	short spindle 6, isoform B
3L	NT_037436.4	6087269	6090034	+	38695	CG13293	Dmel_CG13293	NP_001261464.1	599	uncharacterized protein Dmel_CG13293, isoform D
3L	NT_037436.4	6087269	6090034	+	38695	CG13293	Dmel_CG13293	NP_648024.2	599	uncharacterized protein Dmel_CG13293, isoform B
3L	NT_037436.4	6087269	6090034	+	38695	CG13293	Dmel_CG13293	NP_001261463.1	594	uncharacterized protein Dmel_CG13293, isoform C
3L	NT_037436.4	6087269	6090034	+	38695	CG13293	Dmel_CG13293	NP_001261465.1	599	uncharacterized protein Dmel_CG13293, isoform E
3L	NT_037436.4	6092223	6093085	-	38696	CG10469	Dmel_CG10469	NP_648025.1	267	uncharacterized protein Dmel_CG10469
3L	NT_037436.4	6093301	6094395	-	38697	CG10467	Dmel_CG10467	NP_648026.1	364	uncharacterized protein Dmel_CG10467
3L	NT_037436.4	6095197	6096262	+	38698	loj	Dmel_CG10733	NP_729140.2	237	logjam, isoform D
3L	NT_037436.4	6095197	6096262	+	38698	loj	Dmel_CG10733	NP_729141.2	237	logjam, isoform F
3L	NT_037436.4	6095197	6096262	+	38698	loj	Dmel_CG10733	NP_648027.3	237	logjam, isoform E
3L	NT_037436.4	6100530	6122613	+	38700	Ets65A	Dmel_CG7018	NP_001303374.1	657	Ets at 65A, isoform D
3L	NT_037436.4	6100530	6122112	+	38700	Ets65A	Dmel_CG7018	NP_729142.1	490	Ets at 65A, isoform A
3L	NT_037436.4	6100530	6122139	+	38700	Ets65A	Dmel_CG7018	NP_001137894.2	499	Ets at 65A, isoform C
3L	NT_037436.4	6100530	6122826	+	38700	Ets65A	Dmel_CG7018	NP_001303373.1	728	Ets at 65A, isoform E
3L	NT_037436.4	6112120	6122112	+	38700	Ets65A	Dmel_CG7018	NP_523945.2	257	Ets at 65A, isoform B
3L	NT_037436.4	6124047	6128561	-	38701	l(3)mbn	Dmel_CG12755	NP_729143.2	653	lethal (3) malignant blood neoplasm, isoform B
3L	NT_037436.4	6124047	6128561	-	38701	l(3)mbn	Dmel_CG12755	NP_001303396.1	596	lethal (3) malignant blood neoplasm, isoform E
3L	NT_037436.4	6124047	6128561	-	38701	l(3)mbn	Dmel_CG12755	NP_001303395.1	402	lethal (3) malignant blood neoplasm, isoform D
3L	NT_037436.4	6130551	6130929	-	59159	Lcp65Ag3	Dmel_CG18779	NP_652662.1	105	larval cuticle protein
3L	NT_037436.4	6131419	6132081	-	59158	Cpr65Au	Dmel_CG18778	NP_652661.1	106	cuticular protein 65Au, isoform A
3L	NT_037436.4	6131419	6132081	-	59158	Cpr65Au	Dmel_CG18778	NP_001286953.1	106	cuticular protein 65Au, isoform B
3L	NT_037436.4	6133154	6133532	-	38702	Lcp65Ag2	Dmel_CG10534	NP_477272.1	105	Lcp65Ag2
3L	NT_037436.4	6134835	6135213	-	38703	Lcp65Ag1	Dmel_CG10530	NP_477273.1	105	Lcp65Ag1
3L	NT_037436.4	6136380	6136740	-	45017	Lcp65Af	Dmel_CG10533	NP_477274.1	100	Lcp65Af
3L	NT_037436.4	6137719	6138078	-	45018	Lcp65Ae	Dmel_CG10529	NP_788468.1	99	Lcp65Ae
3L	NT_037436.4	6139416	6139861	-	318014	Cpr65Av	Dmel_CG32405	NP_729146.1	111	cuticular protein 65Av
3L	NT_037436.4	6141965	6142383	-	38706	Cpr65Aw	Dmel_CG32404	NP_729147.1	117	cuticular protein 65Aw, isoform A
3L	NT_037436.4	6141965	6142286	-	38706	Cpr65Aw	Dmel_CG32404	NP_001246643.1	86	cuticular protein 65Aw, isoform B
3L	NT_037436.4	6143469	6143886	+	38707	Lcp65Ad	Dmel_CG6955	NP_477278.1	108	Lcp65Ad, isoform A
3L	NT_037436.4	6143469	6143886	+	38707	Lcp65Ad	Dmel_CG6955	NP_001261466.1	108	Lcp65Ad, isoform B
3L	NT_037436.4	6144911	6145310	+	38708	Lcp65Ac	Dmel_CG6956	NP_477279.1	109	Lcp65Ac
3L	NT_037436.4	6146722	6147036	+	48381	Lcp65Ab2	Dmel_CG18773	NP_788469.1	104	Lcp65Ab2
3L	NT_037436.4	6147563	6147939	-	5740751	Cpr65Ax1	Dmel_CG34270	NP_001097523.1	102	cuticular protein 65Ax1
3L	NT_037436.4	6149593	6149907	+	48382	Lcp65Ab1	Dmel_CG32400	NP_524814.2	104	Lcp65Ab1
3L	NT_037436.4	6150434	6150810	-	59157	Cpr65Ax2	Dmel_CG18777	NP_001261467.1	102	cuticular protein 65Ax2, isoform B
3L	NT_037436.4	6150434	6150810	-	59157	Cpr65Ax2	Dmel_CG18777	NP_652660.1	102	cuticular protein 65Ax2, isoform A
3L	NT_037436.4	6151333	6151641	+	38709	Lcp65Aa	Dmel_CG7287	NP_477280.1	102	Lcp65Aa
3L	NT_037436.4	6152281	6152679	-	38710	Acp65Aa	Dmel_CG10297	NP_477282.2	105	adult cuticle protein 65Aa
3L	NT_037436.4	6156719	6157347	-	38711	CG13297	Dmel_CG13297	NP_648030.2	145	uncharacterized protein Dmel_CG13297
3L	NT_037436.4	6158120	6158564	-	5740348	Cpr65Ay	Dmel_CG34271	NP_001097524.1	109	cuticular protein 65Ay
3L	NT_037436.4	6160814	6161589	+	38712	Cpr65Az	Dmel_CG12330	NP_648031.1	239	cuticular protein 65Az
3L	NT_037436.4	6163157	6164682	+	38713	CG13296	Dmel_CG13296	NP_648032.1	465	uncharacterized protein Dmel_CG13296
3L	NT_037436.4	6169801	6173436	-	38714	CG10289	Dmel_CG10289	NP_001261469.1	991	uncharacterized protein Dmel_CG10289, isoform C
3L	NT_037436.4	6169801	6173436	-	38714	CG10289	Dmel_CG10289	NP_001261468.1	967	uncharacterized protein Dmel_CG10289, isoform B
3L	NT_037436.4	6169801	6173436	-	38714	CG10289	Dmel_CG10289	NP_001261470.1	996	uncharacterized protein Dmel_CG10289, isoform D
3L	NT_037436.4	6169801	6173436	-	38714	CG10289	Dmel_CG10289	NP_648033.2	991	uncharacterized protein Dmel_CG10289, isoform A
3L	NT_037436.4	6174295	6178644	+	38715	CG7376	Dmel_CG7376	NP_648034.1	1270	CG7376, isoform A
3L	NT_037436.4	6174295	6178644	+	38715	CG7376	Dmel_CG7376	NP_001261471.1	1270	CG7376, isoform B
3L	NT_037436.4	6179057	6181767	-	38716	CG10274	Dmel_CG10274	NP_001097525.1	863	uncharacterized protein Dmel_CG10274
3L	NT_037436.4	6182417	6184801	-	38717	D19B	Dmel_CG10270	NP_477297.1	774	D19B
3L	NT_037436.4	6185396	6185714	+	12798363	CG43293	Dmel_CG43293	NP_001246645.1	81	uncharacterized protein Dmel_CG43293, isoform B
3L	NT_037436.4	6185396	6185766	+	12798363	CG43293	Dmel_CG43293	NP_001246644.1	103	uncharacterized protein Dmel_CG43293, isoform A
3L	NT_037436.4	6186381	6188979	-	38718	D19A	Dmel_CG10269	NP_477304.1	845	D19A
3L	NT_037436.4	6189814	6191860	+	38719	CG7386	Dmel_CG7386	NP_648036.1	662	CG7386
3L	NT_037436.4	6192481	6192982	-	38720	CG13298	Dmel_CG13298	NP_648037.1	121	uncharacterized protein Dmel_CG13298
3L	NT_037436.4	6194052	6197721	+	38721	Trn	Dmel_CG7398	NP_477368.1	893	transportin, isoform A
3L	NT_037436.4	6194052	6197721	+	38721	Trn	Dmel_CG7398	NP_001261472.1	893	transportin, isoform D
3L	NT_037436.4	6194052	6197721	+	38721	Trn	Dmel_CG7398	NP_729154.1	893	transportin, isoform B
3L	NT_037436.4	6194052	6197721	+	38721	Trn	Dmel_CG7398	NP_729155.1	893	transportin, isoform C
3L	NT_037436.4	6200540	6203600	+	38722	CG8219	Dmel_CG8219	NP_648038.1	853	CG8219
3L	NT_037436.4	6204175	6217815	-	38723	LanA	Dmel_CG10236	NP_476617.1	3712	laminin A
3L	NT_037436.4	6220644	6220828	+	26067038	CG33946	Dmel_CG33946	NP_001303406.1	40	uncharacterized protein Dmel_CG33946
3L	NT_037436.4	6231923	6232324	-	38724	CG13299	Dmel_CG13299	NP_648039.1	112	uncharacterized protein Dmel_CG13299
3L	NT_037436.4	6232624	6232921	-	4379909	BG642312	Dmel_CG33943	NP_001036587.1	77	BG642312, isoform A
3L	NT_037436.4	6232624	6232921	-	4379909	BG642312	Dmel_CG33943	NP_001189052.1	77	BG642312, isoform B
3L	NT_037436.4	6233618	6234038	-	10178862	CG42714	Dmel_CG42714	NP_001189053.1	101	uncharacterized protein Dmel_CG42714
3L	NT_037436.4	6234501	6238756	-	38725	CG10226	Dmel_CG10226	NP_001261473.1	1206	uncharacterized protein Dmel_CG10226, isoform B
3L	NT_037436.4	6234501	6239589	-	38725	CG10226	Dmel_CG10226	NP_648040.1	1320	uncharacterized protein Dmel_CG10226, isoform A
3L	NT_037436.4	6240591	6245302	-	38726	Mdr65	Dmel_CG10181	NP_476831.1	1302	multi drug resistance 65
3L	NT_037436.4	6246638	6253570	-	38727	Best2	Dmel_CG10173	NP_729159.2	809	bestrophin 2
3L	NT_037436.4	6257506	6258760	-	38728	CG10163	Dmel_CG10163	NP_648042.1	378	uncharacterized protein Dmel_CG10163
3L	NT_037436.4	6259746	6260882	-	45880	ImpL3	Dmel_CG10160	NP_001261476.1	332	Ecdysone-inducible gene L3, isoform D
3L	NT_037436.4	6259746	6260882	-	45880	ImpL3	Dmel_CG10160	NP_001261475.1	332	Ecdysone-inducible gene L3, isoform C
3L	NT_037436.4	6259746	6260882	-	45880	ImpL3	Dmel_CG10160	NP_001261474.1	332	Ecdysone-inducible gene L3, isoform B
3L	NT_037436.4	6259746	6260882	-	45880	ImpL3	Dmel_CG10160	NP_476581.1	332	Ecdysone-inducible gene L3, isoform A
3L	NT_037436.4	6275827	6276081	+	12798364	CG43168	Dmel_CG43168	NP_001246646.1	84	uncharacterized protein Dmel_CG43168
3L	NT_037436.4	6320611	6322098	+	318011	Or65a	Dmel_CG32401	NP_729161.1	417	odorant receptor 65a
3L	NT_037436.4	6325612	6327049	+	318012	Or65b	Dmel_CG32402	NP_729162.3	406	odorant receptor 65b
3L	NT_037436.4	6327608	6329069	+	318013	Or65c	Dmel_CG32403	NP_729163.2	410	odorant receptor 65c
3L	NT_037436.4	6331030	6332896	-	38730	CG13300	Dmel_CG13300	NP_648043.1	388	uncharacterized protein Dmel_CG13300
3L	NT_037436.4	6350310	6350735	+	8674009	Sfp65A	Dmel_CG42479	NP_001163353.1	141	seminal fluid protein 65A
3L	NT_037436.4	6461666	6485056	+	38732	CG42747	Dmel_CG42747	NP_648045.2	404	uncharacterized protein Dmel_CG42747
3L	NT_037436.4	6486935	6488341	-	38733	CG10147	Dmel_CG10147	NP_001261477.1	448	uncharacterized protein Dmel_CG10147, isoform B
3L	NT_037436.4	6486935	6488341	-	38733	CG10147	Dmel_CG10147	NP_648046.1	448	uncharacterized protein Dmel_CG10147, isoform A
3L	NT_037436.4	6488761	6491049	+	38734	CG8270	Dmel_CG8270	NP_648047.2	642	CG8270
3L	NT_037436.4	6491318	6495190	-	38735	Vps8	Dmel_CG10144	NP_648048.1	1229	vacuolar protein sorting 8
3L	NT_037436.4	6523501	6548789	+	38736	sfl	Dmel_CG8339	NP_523946.1	1048	sulfateless, isoform A
3L	NT_037436.4	6523501	6548789	+	38736	sfl	Dmel_CG8339	NP_001163354.1	1048	sulfateless, isoform B
3L	NT_037436.4	6530863	6532303	+	117406	CG32396	Dmel_CG32396	NP_729172.1	462	uncharacterized protein Dmel_CG32396
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_996004.1	366	uncharacterized protein Dmel_CG18769, isoform D
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_729174.2	366	uncharacterized protein Dmel_CG18769, isoform C
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_729173.1	366	uncharacterized protein Dmel_CG18769, isoform B
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_996002.2	443	uncharacterized protein Dmel_CG18769, isoform G
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_001286954.1	365	uncharacterized protein Dmel_CG18769, isoform I
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_001246647.1	457	uncharacterized protein Dmel_CG18769, isoform H
3L	NT_037436.4	6551833	6591721	+	59223	CG18769	Dmel_CG18769	NP_652706.3	366	uncharacterized protein Dmel_CG18769, isoform A
3L	NT_037436.4	6563443	6584189	-	318008	jv	Dmel_CG32397	NP_729175.3	1892	javelin, isoform B
3L	NT_037436.4	6563443	6584189	-	318008	jv	Dmel_CG32397	NP_001246649.1	1912	javelin, isoform D
3L	NT_037436.4	6563443	6584189	-	318008	jv	Dmel_CG32397	NP_001246648.1	1892	javelin, isoform C
3L	NT_037436.4	6590633	6591721	+	59223	CG18769	Dmel_CG18769	NP_996003.1	285	uncharacterized protein Dmel_CG18769, isoform E
3L	NT_037436.4	6594049	6603098	-	38738	ndl	Dmel_CG10129	NP_523947.2	2616	nudel
3L	NT_037436.4	6604678	6605909	-	251414	zpg	Dmel_CG10125	NP_001261478.1	367	zero population growth, isoform B
3L	NT_037436.4	6604678	6605909	-	251414	zpg	Dmel_CG10125	NP_648049.1	367	zero population growth, isoform A
3L	NT_037436.4	6606317	6608418	+	38740	CG8368	Dmel_CG8368	NP_648050.1	681	CG8368, isoform A
3L	NT_037436.4	6606317	6608418	+	38740	CG8368	Dmel_CG8368	NP_729177.1	681	CG8368, isoform B
3L	NT_037436.4	6609470	6617994	+	38741	CG8398	Dmel_CG8398	NP_648051.1	537	CG8398, isoform A
3L	NT_037436.4	6616165	6617994	+	38741	CG8398	Dmel_CG8398	NP_996005.1	435	CG8398, isoform D
3L	NT_037436.4	6616165	6617994	+	38741	CG8398	Dmel_CG8398	NP_729179.1	435	CG8398, isoform E
3L	NT_037436.4	6616165	6617994	+	38741	CG8398	Dmel_CG8398	NP_729180.1	435	CG8398, isoform C
3L	NT_037436.4	6624570	6634763	+	38742	GluRIA	Dmel_CG8442	NP_476855.1	991	glutamate receptor IA
3L	NT_037436.4	6664431	6665507	-	38743	eIF4E-4	Dmel_CG10124	NP_648052.1	229	eIF4E-4
3L	NT_037436.4	6666638	6667816	-	117342	CG32395	Dmel_CG32395	NP_729182.3	371	uncharacterized protein Dmel_CG32395
3L	NT_037436.4	6689966	6692453	-	38744	SP1173	Dmel_CG10121	NP_729184.1	741	SP1173, isoform C
3L	NT_037436.4	6689966	6692453	-	38744	SP1173	Dmel_CG10121	NP_729183.1	741	SP1173, isoform A
3L	NT_037436.4	6689966	6692453	-	38744	SP1173	Dmel_CG10121	NP_648053.1	741	SP1173, isoform B
3L	NT_037436.4	6689966	6692453	-	38744	SP1173	Dmel_CG10121	NP_729185.1	741	SP1173, isoform D
3L	NT_037436.4	6705483	6708944	+	38745	CG8519	Dmel_CG8519	NP_648054.2	207	CG8519, isoform A
3L	NT_037436.4	6708429	6708944	+	38745	CG8519	Dmel_CG8519	NP_001261479.1	151	CG8519, isoform B
3L	NT_037436.4	6714970	6719073	-	38746	ple	Dmel_CG10118	NP_476897.1	508	pale, isoform A
3L	NT_037436.4	6714970	6719073	-	38746	ple	Dmel_CG10118	NP_476898.1	579	pale, isoform B
3L	NT_037436.4	6714970	6719073	-	38746	ple	Dmel_CG10118	NP_001286955.1	579	pale, isoform C
3L	NT_037436.4	6730354	6741942	-	38747	dikar	Dmel_CG42799	NP_001261480.1	3261	dikar, isoform F
3L	NT_037436.4	6730471	6741942	-	38747	dikar	Dmel_CG42799	NP_729188.2	3080	dikar, isoform C
3L	NT_037436.4	6730471	6741942	-	38747	dikar	Dmel_CG42799	NP_001189054.1	3222	dikar, isoform D
3L	NT_037436.4	6730471	6741942	-	38747	dikar	Dmel_CG42799	NP_001261481.1	3080	dikar, isoform G
3L	NT_037436.4	6740645	6741942	-	38747	dikar	Dmel_CG42799	NP_996007.1	342	dikar, isoform B
3L	NT_037436.4	6740645	6741942	-	38747	dikar	Dmel_CG42799	NP_648055.1	342	dikar, isoform E
3L	NT_037436.4	6744639	6751433	-	38748	velo	Dmel_CG10107	NP_648056.1	1833	veloren, isoform A
3L	NT_037436.4	6744639	6747114	-	38748	velo	Dmel_CG10107	NP_788470.1	711	veloren, isoform B
3L	NT_037436.4	6744639	6751433	-	38748	velo	Dmel_CG10107	NP_996008.1	1833	veloren, isoform C
3L	NT_037436.4	6744639	6747114	-	38748	velo	Dmel_CG10107	NP_001286956.1	711	veloren, isoform D
3L	NT_037436.4	6753107	6753945	+	38749	CG8549	Dmel_CG8549	NP_648057.2	252	CG8549, isoform A
3L	NT_037436.4	6753107	6753945	+	38749	CG8549	Dmel_CG8549	NP_001261482.1	252	CG8549, isoform B
3L	NT_037436.4	6754275	6756404	-	38750	CG10103	Dmel_CG10103	NP_001261486.1	384	uncharacterized protein Dmel_CG10103, isoform E
3L	NT_037436.4	6754275	6756404	-	38750	CG10103	Dmel_CG10103	NP_001261483.1	400	uncharacterized protein Dmel_CG10103, isoform B
3L	NT_037436.4	6754275	6756404	-	38750	CG10103	Dmel_CG10103	NP_001261485.1	379	uncharacterized protein Dmel_CG10103, isoform D
3L	NT_037436.4	6754275	6756404	-	38750	CG10103	Dmel_CG10103	NP_648058.1	417	uncharacterized protein Dmel_CG10103, isoform A
3L	NT_037436.4	6754275	6756404	-	38750	CG10103	Dmel_CG10103	NP_001261484.1	396	uncharacterized protein Dmel_CG10103, isoform C
3L	NT_037436.4	6754925	6756404	-	38750	CG10103	Dmel_CG10103	NP_001261487.1	327	uncharacterized protein Dmel_CG10103, isoform F
3L	NT_037436.4	6756932	6760890	-	38751	CG32392	Dmel_CG32392	NP_648059.1	659	uncharacterized protein Dmel_CG32392, isoform B
3L	NT_037436.4	6756932	6763128	-	38751	CG32392	Dmel_CG32392	NP_729190.1	411	uncharacterized protein Dmel_CG32392, isoform A
3L	NT_037436.4	6790826	6793006	+	38752	vvl	Dmel_CG10037	NP_001303383.1	726	ventral veins lacking, isoform E
3L	NT_037436.4	6790826	6793054	+	38752	vvl	Dmel_CG10037	NP_001303384.1	742	ventral veins lacking, isoform F
3L	NT_037436.4	6790826	6792109	+	38752	vvl	Dmel_CG10037	NP_001286957.1	427	ventral veins lacking, isoform D
3L	NT_037436.4	6790826	6792109	+	38752	vvl	Dmel_CG10037	NP_523948.1	427	ventral veins lacking, isoform A
3L	NT_037436.4	6790826	6792967	+	38752	vvl	Dmel_CG10037	NP_001163355.2	713	ventral veins lacking, isoform C
3L	NT_037436.4	6912100	6913512	-	38753	Prat2	Dmel_CG10078	NP_729191.1	470	phosphoribosylamidotransferase 2, isoform A
3L	NT_037436.4	6912100	6914689	-	38753	Prat2	Dmel_CG10078	NP_523949.2	547	phosphoribosylamidotransferase 2, isoform B
3L	NT_037436.4	6931448	6931894	-	19836228	CG45413	Dmel_CG45413	NP_001286958.1	148	uncharacterized protein Dmel_CG45413, isoform A
3L	NT_037436.4	6931448	6931894	-	19836228	CG45413	Dmel_CG45413	NP_001286959.1	148	uncharacterized protein Dmel_CG45413, isoform B
3L	NT_037436.4	6932960	6934679	+	38754	CG14820	Dmel_CG14820	NP_648060.1	416	uncharacterized protein Dmel_CG14820
3L	NT_037436.4	6944691	6948505	+	38755	tow	Dmel_CG14821	NP_648061.2	441	target of wingless, isoform F
3L	NT_037436.4	6944691	6948505	+	38755	tow	Dmel_CG14821	NP_001261489.1	451	target of wingless, isoform E
3L	NT_037436.4	6944691	6948505	+	38755	tow	Dmel_CG14821	NP_001261490.1	446	target of wingless, isoform G
3L	NT_037436.4	6944691	6948505	+	38755	tow	Dmel_CG14821	NP_001097526.1	446	target of wingless, isoform C
3L	NT_037436.4	6944691	6948505	+	38755	tow	Dmel_CG14821	NP_001261488.1	446	target of wingless, isoform D
3L	NT_037436.4	6950330	6955388	-	38756	CG10077	Dmel_CG10077	NP_001261491.1	818	uncharacterized protein Dmel_CG10077, isoform D
3L	NT_037436.4	6950330	6955388	-	38756	CG10077	Dmel_CG10077	NP_648062.2	818	uncharacterized protein Dmel_CG10077, isoform A
3L	NT_037436.4	6953759	6955388	-	38756	CG10077	Dmel_CG10077	NP_729194.2	472	uncharacterized protein Dmel_CG10077, isoform C
3L	NT_037436.4	6956235	6956947	+	38757	CG9948	Dmel_CG9948	NP_648063.1	218	CG9948, isoform A
3L	NT_037436.4	6956235	6956947	+	38757	CG9948	Dmel_CG9948	NP_001261493.1	218	CG9948, isoform C
3L	NT_037436.4	6956235	6956947	+	38757	CG9948	Dmel_CG9948	NP_001261492.1	218	CG9948, isoform B
3L	NT_037436.4	6957003	6958021	-	38758	CG10075	Dmel_CG10075	NP_648064.1	259	uncharacterized protein Dmel_CG10075
3L	NT_037436.4	6958433	6959521	+	44498	Surf1	Dmel_CG9943	NP_524758.1	300	surfeit 1
3L	NT_037436.4	6960186	6964546	-	38760	sgl	Dmel_CG10072	NP_476980.1	476	sugarless
3L	NT_037436.4	6965320	6967807	-	38761	CG10064	Dmel_CG10064	NP_648065.1	742	uncharacterized protein Dmel_CG10064
3L	NT_037436.4	6968214	6968934	-	38762	Mis12	Dmel_CG18156	NP_648066.1	181	Mis12
3L	NT_037436.4	6969832	6971553	+	38763	CG9953	Dmel_CG9953	NP_648067.2	508	CG9953
3L	NT_037436.4	6971658	6972358	-	38764	CG10063	Dmel_CG10063	NP_648068.1	212	uncharacterized protein Dmel_CG10063
3L	NT_037436.4	6973343	6979638	-	38765	Galphai	Dmel_CG10060	NP_477502.1	355	G protein alpha i subunit
3L	NT_037436.4	6983915	6984085	-	192611	CG32388	Dmel_CG32388	NP_001246650.1	56	uncharacterized protein Dmel_CG43439
3L	NT_037436.4	6984200	6984502	-	192611	CG32388	Dmel_CG32388	NP_729198.1	79	uncharacterized protein Dmel_CG32388
3L	NT_037436.4	6990831	6994275	+	38766	bin	Dmel_CG18647	NP_523950.2	676	biniou
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001163363.1	971	multiplexin, isoform L
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001163362.2	1013	multiplexin, isoform O
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001246651.1	1039	multiplexin, isoform R
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001286961.1	1022	multiplexin, isoform T
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001163358.1	1023	multiplexin, isoform G
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001163364.1	1017	multiplexin, isoform M
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001163356.1	1008	multiplexin, isoform B
3L	NT_037436.4	7012190	7052052	+	38769	Mp	Dmel_CG42543	NP_001286962.1	973	multiplexin, isoform U
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_788472.2	792	multiplexin, isoform N
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_001163360.1	257	multiplexin, isoform I
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_788471.1	778	multiplexin, isoform E
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_001163359.1	813	multiplexin, isoform H
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_001286960.1	804	multiplexin, isoform S
3L	NT_037436.4	7019749	7052052	+	38769	Mp	Dmel_CG42543	NP_001163357.1	787	multiplexin, isoform F
3L	NT_037436.4	7025964	7026748	-	38768	CG17744	Dmel_CG17744	NP_648070.1	238	uncharacterized protein Dmel_CG17744
3L	NT_037436.4	7038101	7052052	+	38769	Mp	Dmel_CG42543	NP_001163361.1	579	multiplexin, isoform J
3L	NT_037436.4	7048899	7052052	+	38769	Mp	Dmel_CG42543	NP_001246652.1	229	multiplexin, isoform P
3L	NT_037436.4	7060332	7062874	-	38771	CG8641	Dmel_CG8641	NP_001261494.1	434	CG8641, isoform B
3L	NT_037436.4	7060332	7062874	-	38771	CG8641	Dmel_CG8641	NP_648073.1	434	CG8641, isoform A
3L	NT_037436.4	7066384	7066868	+	38772	CG14823	Dmel_CG14823	NP_729206.1	116	uncharacterized protein Dmel_CG14823, isoform B
3L	NT_037436.4	7066384	7066773	+	38772	CG14823	Dmel_CG14823	NP_648074.1	129	uncharacterized protein Dmel_CG14823, isoform D
3L	NT_037436.4	7066384	7068227	+	38772	CG14823	Dmel_CG14823	NP_729205.1	263	uncharacterized protein Dmel_CG14823, isoform A
3L	NT_037436.4	7068242	7069199	-	318007	CG32391	Dmel_CG32391	NP_001163365.2	244	uncharacterized protein Dmel_CG32391
3L	NT_037436.4	7073476	7075247	-	3885636	CG34030	Dmel_CG34030	NP_001033993.1	273	uncharacterized protein Dmel_CG34030
3L	NT_037436.4	7086119	7086568	-	38773	Cpr65Ea	Dmel_CG8640	NP_648075.1	127	cuticular protein 65Ea
3L	NT_037436.4	7088099	7088709	-	38774	Cpr65Eb	Dmel_CG8638	NP_648076.3	179	cuticular protein 65Eb
3L	NT_037436.4	7093284	7093739	+	38775	Cpr65Ec	Dmel_CG8634	NP_648077.1	127	cuticular protein 65Ec
3L	NT_037436.4	7111285	7122957	+	3346238	form3	Dmel_CG33556	NP_001014571.1	1644	formin 3, isoform A
3L	NT_037436.4	7111285	7122957	+	3346238	form3	Dmel_CG33556	NP_001097527.1	1717	formin 3, isoform B
3L	NT_037436.4	7123533	7125422	-	38779	msl-3	Dmel_CG8631	NP_523951.1	512	male-specific lethal 3
3L	NT_037436.4	7125926	7127888	+	38780	BBS1	Dmel_CG14825	NP_648080.1	605	Bardet-Biedl syndrome 1
3L	NT_037436.4	7127975	7128229	-	38781	CG8629	Dmel_CG8629	NP_648081.1	84	CG8629
3L	NT_037436.4	7128952	7129274	+	38782	CG15829	Dmel_CG15829	NP_648082.1	82	uncharacterized protein Dmel_CG15829, isoform A
3L	NT_037436.4	7128952	7129274	+	38782	CG15829	Dmel_CG15829	NP_001286963.1	82	uncharacterized protein Dmel_CG15829, isoform B
3L	NT_037436.4	7131002	7131389	+	38783	CG8628	Dmel_CG8628	NP_648083.1	84	CG8628, isoform A
3L	NT_037436.4	7131002	7131389	+	38783	CG8628	Dmel_CG8628	NP_001163366.1	84	CG8628, isoform B
3L	NT_037436.4	7132666	7133367	+	38784	Dbi	Dmel_CG8627	NP_729218.1	86	Diazepam-binding inhibitor, isoform A
3L	NT_037436.4	7132666	7133367	+	38784	Dbi	Dmel_CG8627	NP_523952.2	86	Diazepam-binding inhibitor, isoform B
3L	NT_037436.4	7139223	7142735	+	38785	melt	Dmel_CG8624	NP_001014572.1	988	melted, isoform B
3L	NT_037436.4	7139223	7142735	+	38785	melt	Dmel_CG8624	NP_001261495.1	992	melted, isoform D
3L	NT_037436.4	7139223	7142735	+	38785	melt	Dmel_CG8624	NP_523953.2	994	melted, isoform C
3L	NT_037436.4	7143776	7147847	-	38786	corn	Dmel_CG42278	NP_729220.2	1107	cornetto, isoform C
3L	NT_037436.4	7143776	7147847	-	38786	corn	Dmel_CG42278	NP_001261496.1	1101	cornetto, isoform D
3L	NT_037436.4	7144359	7147847	-	38786	corn	Dmel_CG42278	NP_001261497.1	970	cornetto, isoform E
3L	NT_037436.4	7144725	7147847	-	38786	corn	Dmel_CG42278	NP_523954.2	960	cornetto, isoform B
3L	NT_037436.4	7158247	7158610	+	50310	CG8620	Dmel_CG8620	NP_652453.1	99	CG8620, isoform A
3L	NT_037436.4	7158247	7158810	+	50310	CG8620	Dmel_CG8620	NP_001137895.1	187	CG8620, isoform B
3L	NT_037436.4	7161357	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001286965.1	1967	down syndrome cell adhesion molecule 2, isoform R
3L	NT_037436.4	7161357	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001286964.1	1968	down syndrome cell adhesion molecule 2, isoform Q
3L	NT_037436.4	7162263	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001261500.1	2101	down syndrome cell adhesion molecule 2, isoform P
3L	NT_037436.4	7162311	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001261498.1	2085	down syndrome cell adhesion molecule 2, isoform N
3L	NT_037436.4	7162428	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001261499.1	2036	down syndrome cell adhesion molecule 2, isoform O
3L	NT_037436.4	7162428	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001303407.1	2046	down syndrome cell adhesion molecule 2, isoform S
3L	NT_037436.4	7162428	7189315	-	38788	Dscam2	Dmel_CG42256	NP_729223.2	2040	down syndrome cell adhesion molecule 2, isoform H
3L	NT_037436.4	7162428	7189315	-	38788	Dscam2	Dmel_CG42256	NP_729225.2	2074	down syndrome cell adhesion molecule 2, isoform J
3L	NT_037436.4	7163451	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001137896.1	1833	down syndrome cell adhesion molecule 2, isoform K
3L	NT_037436.4	7163451	7189315	-	38788	Dscam2	Dmel_CG42256	NP_729224.2	1808	down syndrome cell adhesion molecule 2, isoform G
3L	NT_037436.4	7163451	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001036588.2	1809	down syndrome cell adhesion molecule 2, isoform I
3L	NT_037436.4	7163451	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001163368.1	1813	down syndrome cell adhesion molecule 2, isoform M
3L	NT_037436.4	7163451	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001163367.1	1814	down syndrome cell adhesion molecule 2, isoform L
3L	NT_037436.4	7171527	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001137898.1	752	down syndrome cell adhesion molecule 2, isoform F
3L	NT_037436.4	7175348	7189315	-	38788	Dscam2	Dmel_CG42256	NP_001137897.1	543	down syndrome cell adhesion molecule 2, isoform E
3L	NT_037436.4	7234784	7235572	+	38791	CG14826	Dmel_CG14826	NP_648088.1	219	uncharacterized protein Dmel_CG14826, isoform A
3L	NT_037436.4	7234784	7235572	+	38791	CG14826	Dmel_CG14826	NP_001097528.2	219	uncharacterized protein Dmel_CG14826, isoform C
3L	NT_037436.4	7237374	7238099	-	38792	CG14829	Dmel_CG14829	NP_648089.2	219	uncharacterized protein Dmel_CG14829
3L	NT_037436.4	7238635	7240164	+	38793	BHD	Dmel_CG8616	NP_648090.1	460	Birt-Hogg-Dube homolog
3L	NT_037436.4	7240301	7241228	-	38794	RpL18	Dmel_CG8615	NP_001261501.1	188	ribosomal protein L18, isoform B
3L	NT_037436.4	7240301	7241228	-	38794	RpL18	Dmel_CG8615	NP_648091.1	188	ribosomal protein L18, isoform A
3L	NT_037436.4	7240301	7241228	-	38794	RpL18	Dmel_CG8615	NP_001286966.1	188	ribosomal protein L18, isoform C
3L	NT_037436.4	7241875	7243053	+	38795	Neos	Dmel_CG8614	NP_001261502.1	371	neosin, isoform B
3L	NT_037436.4	7241875	7243053	+	38795	Neos	Dmel_CG8614	NP_523955.1	371	neosin, isoform A
3L	NT_037436.4	7243205	7243889	-	38796	mRpL50	Dmel_CG8612	NP_648092.1	189	mitochondrial ribosomal protein L50
3L	NT_037436.4	7244388	7245383	+	38797	mei-P22	Dmel_CG14827	NP_523956.1	331	meiotic P22
3L	NT_037436.4	7245832	7248681	-	38798	Cdc27	Dmel_CG8610	NP_648093.2	900	cell division cycle 27, isoform A
3L	NT_037436.4	7245832	7248681	-	38798	Cdc27	Dmel_CG8610	NP_001261503.1	900	cell division cycle 27, isoform B
3L	NT_037436.4	7249610	7250444	-	38799	MED4	Dmel_CG8609	NP_648094.1	258	mediator complex subunit 4
3L	NT_037436.4	7251099	7252198	-	38800	CG14830	Dmel_CG14830	NP_648095.2	323	uncharacterized protein Dmel_CG14830, isoform A
3L	NT_037436.4	7251099	7252198	-	38800	CG14830	Dmel_CG14830	NP_001246654.1	323	uncharacterized protein Dmel_CG14830, isoform C
3L	NT_037436.4	7251099	7252198	-	38800	CG14830	Dmel_CG14830	NP_001246653.1	323	uncharacterized protein Dmel_CG14830, isoform B
3L	NT_037436.4	7269146	7285037	-	38801	unc-13-4A	Dmel_CG32381	NP_648096.4	1371	unc-13-4A, isoform B
3L	NT_037436.4	7269146	7285037	-	38801	unc-13-4A	Dmel_CG32381	NP_001261504.1	1371	unc-13-4A, isoform C
3L	NT_037436.4	7320133	7321096	+	38805	CG8607	Dmel_CG8607	NP_648100.2	275	CG8607
3L	NT_037436.4	7321186	7323310	-	38806	RhoGEF4	Dmel_CG8606	NP_648101.1	647	Rho guanine nucleotide exchange factor 4, isoform A
3L	NT_037436.4	7321186	7323104	-	38806	RhoGEF4	Dmel_CG8606	NP_729232.1	600	Rho guanine nucleotide exchange factor 4, isoform B
3L	NT_037436.4	7323728	7326145	+	38807	Rint1	Dmel_CG8605	NP_648102.2	724	RAD50 interactor 1
3L	NT_037436.4	7326892	7328328	-	38808	CG8602	Dmel_CG8602	NP_648103.1	478	CG8602, isoform A
3L	NT_037436.4	7326892	7328328	-	38808	CG8602	Dmel_CG8602	NP_001261505.1	478	CG8602, isoform B
3L	NT_037436.4	7329239	7329591	+	7354423	CG42307	Dmel_CG42307	NP_001137901.1	95	uncharacterized protein Dmel_CG42307, isoform C
3L	NT_037436.4	7329239	7329591	+	7354423	CG42307	Dmel_CG42307	NP_001286967.1	95	uncharacterized protein Dmel_CG42307, isoform D
3L	NT_037436.4	7329239	7329591	+	7354423	CG42307	Dmel_CG42307	NP_001137900.1	95	uncharacterized protein Dmel_CG42307, isoform B
3L	NT_037436.4	7329239	7329591	+	7354423	CG42307	Dmel_CG42307	NP_001137899.1	95	uncharacterized protein Dmel_CG42307, isoform A
3L	NT_037436.4	7329591	7331334	+	7354423	CG42307	Dmel_CG42307	NP_001137902.1	513	mutagen-sensitive 312, isoform D
3L	NT_037436.4	7329591	7333293	+	7354423	CG42307	Dmel_CG42307	NP_729234.2	1149	mutagen-sensitive 312, isoform E
3L	NT_037436.4	7329591	7333293	+	7354423	CG42307	Dmel_CG42307	NP_648104.2	1145	mutagen-sensitive 312, isoform A
3L	NT_037436.4	7334095	7334268	-	38810	CG43780	Dmel_CG43780	NP_001261507.1	57	uncharacterized protein Dmel_CG43781, isoform B
3L	NT_037436.4	7334095	7334268	-	38810	CG43780	Dmel_CG43780	NP_001261506.1	57	uncharacterized protein Dmel_CG43781, isoform A
3L	NT_037436.4	7334275	7334835	-	38810	CG43780	Dmel_CG43780	NP_001163369.2	157	uncharacterized protein Dmel_CG43780, isoform B
3L	NT_037436.4	7334275	7334835	-	38810	CG43780	Dmel_CG43780	NP_648105.1	162	uncharacterized protein Dmel_CG43780, isoform A
3L	NT_037436.4	7335671	7338891	-	38812	eco	Dmel_CG8598	NP_648106.1	1052	establishment of cohesion, isoform A
3L	NT_037436.4	7335671	7338891	-	38812	eco	Dmel_CG8598	NP_729236.2	1052	establishment of cohesion, isoform B
3L	NT_037436.4	7340069	7341470	+	38811	lark	Dmel_CG8597	NP_729240.1	352	lark, isoform E
3L	NT_037436.4	7340069	7341470	+	38811	lark	Dmel_CG8597	NP_729238.1	352	lark, isoform C
3L	NT_037436.4	7340069	7341470	+	38811	lark	Dmel_CG8597	NP_729239.1	352	lark, isoform D
3L	NT_037436.4	7340069	7341470	+	38811	lark	Dmel_CG8597	NP_523957.1	352	lark, isoform A
3L	NT_037436.4	7340069	7341470	+	38811	lark	Dmel_CG8597	NP_729237.1	352	lark, isoform B
3L	NT_037436.4	7341978	7343859	-	38813	CG8596	Dmel_CG8596	NP_648107.3	546	CG8596, isoform A
3L	NT_037436.4	7341978	7343859	-	38813	CG8596	Dmel_CG8596	NP_001261508.1	546	CG8596, isoform B
3L	NT_037436.4	7341978	7343859	-	38813	CG8596	Dmel_CG8596	NP_001261509.1	546	CG8596, isoform C
3L	NT_037436.4	7345822	7347045	-	38814	CG14834	Dmel_CG14834	NP_648108.1	407	uncharacterized protein Dmel_CG14834
3L	NT_037436.4	7347367	7347921	-	38815	Srp19	Dmel_CG4457	NP_477135.2	160	signal recognition particle protein 19
3L	NT_037436.4	7348610	7352393	+	38816	qm	Dmel_CG8593	NP_001163370.1	338	quemao, isoform B
3L	NT_037436.4	7348610	7352393	+	38816	qm	Dmel_CG8593	NP_523958.2	338	quemao, isoform A
3L	NT_037436.4	7348610	7352393	+	38816	qm	Dmel_CG8593	NP_001261510.1	326	quemao, isoform C
3L	NT_037436.4	7353878	7356457	-	38817	CTCF	Dmel_CG8591	NP_648109.1	818	CTCF
3L	NT_037436.4	7357538	7360024	-	38818	pst	Dmel_CG8588	NP_648110.2	682	pastrel, isoform G
3L	NT_037436.4	7357538	7360024	-	38818	pst	Dmel_CG8588	NP_729246.2	707	pastrel, isoform F
3L	NT_037436.4	7357538	7360024	-	38818	pst	Dmel_CG8588	NP_729244.2	682	pastrel, isoform E
3L	NT_037436.4	7360908	7364031	+	38819	Sec63	Dmel_CG8583	NP_648111.1	753	secretory 63
3L	NT_037436.4	7364860	7368934	-	38820	Sh3beta	Dmel_CG8582	NP_001189056.1	216	Sh3beta, isoform D
3L	NT_037436.4	7365246	7368934	-	38820	Sh3beta	Dmel_CG8582	NP_001189057.1	485	Sh3beta, isoform E
3L	NT_037436.4	7367553	7368934	-	38820	Sh3beta	Dmel_CG8582	NP_729248.1	158	Sh3beta, isoform A
3L	NT_037436.4	7367553	7368071	-	38820	Sh3beta	Dmel_CG8582	NP_001189055.1	146	Sh3beta, isoform C
3L	NT_037436.4	7367553	7368934	-	38820	Sh3beta	Dmel_CG8582	NP_648112.2	158	Sh3beta, isoform B
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_729249.1	201	akirin, isoform B
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_001189058.1	201	akirin, isoform C
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_001261511.1	201	akirin, isoform F
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_001189060.1	201	akirin, isoform E
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_001189059.1	201	akirin, isoform D
3L	NT_037436.4	7371835	7372591	+	38821	akirin	Dmel_CG8580	NP_648113.1	201	akirin, isoform A
3L	NT_037436.4	7374594	7381230	-	38823	SMSr	Dmel_CG32380	NP_648114.1	600	SMSr
3L	NT_037436.4	7381955	7385408	+	38824	smid	Dmel_CG8571	NP_001261513.1	927	smallminded, isoform H
3L	NT_037436.4	7381955	7385408	+	38824	smid	Dmel_CG8571	NP_001163371.1	943	smallminded, isoform C
3L	NT_037436.4	7381955	7385408	+	38824	smid	Dmel_CG8571	NP_523959.2	944	smallminded, isoform A
3L	NT_037436.4	7382256	7385408	+	38824	smid	Dmel_CG8571	NP_001261512.1	910	smallminded, isoform G
3L	NT_037436.4	7382256	7385408	+	38824	smid	Dmel_CG8571	NP_996009.2	910	smallminded, isoform I
3L	NT_037436.4	7385708	7387536	-	38825	CG8564	Dmel_CG8564	NP_001261514.1	520	CG8564, isoform C
3L	NT_037436.4	7385708	7387286	-	38825	CG8564	Dmel_CG8564	NP_648115.1	504	CG8564, isoform A
3L	NT_037436.4	7391431	7395904	+	38826	CG8563	Dmel_CG8563	NP_648116.2	440	CG8563, isoform A
3L	NT_037436.4	7391431	7395904	+	38826	CG8563	Dmel_CG8563	NP_001261515.1	440	CG8563, isoform B
3L	NT_037436.4	7396466	7398116	+	326211	CG32379	Dmel_CG32379	NP_729252.2	344	uncharacterized protein Dmel_CG32379
3L	NT_037436.4	7398305	7399724	+	38828	CG8562	Dmel_CG8562	NP_648118.1	424	CG8562
3L	NT_037436.4	7400095	7401500	+	38829	CG18417	Dmel_CG18417	NP_648119.1	427	uncharacterized protein Dmel_CG18417
3L	NT_037436.4	7402363	7403903	-	38830	CG8560	Dmel_CG8560	NP_001261516.1	418	CG8560, isoform B
3L	NT_037436.4	7402363	7403903	-	38830	CG8560	Dmel_CG8560	NP_648120.3	418	CG8560, isoform A
3L	NT_037436.4	7433932	7434510	-	38831	Rac2	Dmel_CG8556	NP_648121.1	192	Rac2, isoform A
3L	NT_037436.4	7433932	7434510	-	38831	Rac2	Dmel_CG8556	NP_001261517.1	192	Rac2, isoform B
3L	NT_037436.4	7436874	7437332	-	38832	CG14835	Dmel_CG14835	NP_648122.1	152	uncharacterized protein Dmel_CG14835
3L	NT_037436.4	7438574	7439405	-	318005	sphinx1	Dmel_CG32383	NP_729255.2	253	sphinx1
3L	NT_037436.4	7439912	7440733	-	38833	sphinx2	Dmel_CG32382	NP_729256.2	253	sphinx2, isoform B
3L	NT_037436.4	7439912	7440733	-	38833	sphinx2	Dmel_CG32382	NP_001303408.1	253	sphinx2, isoform C
3L	NT_037436.4	7445461	7453746	+	2768945	CG42458	Dmel_CG42458	NP_996010.2	711	uncharacterized protein Dmel_CG42458
3L	NT_037436.4	7450909	7452105	+	2768946	CG33278	Dmel_CG33278	NP_996011.1	398	uncharacterized protein Dmel_CG33278
3L	NT_037436.4	7456189	7458353	+	38835	ppk26	Dmel_CG8546	NP_648125.3	597	pickpocket 26
3L	NT_037436.4	7465552	7466155	+	10178939	CG42660	Dmel_CG42660	NP_001286968.1	142	uncharacterized protein Dmel_CG42660, isoform B
3L	NT_037436.4	7465552	7466155	+	10178939	CG42660	Dmel_CG42660	NP_001189062.1	142	uncharacterized protein Dmel_CG42660, isoform A
3L	NT_037436.4	7466286	7466887	+	10178939	CG42660	Dmel_CG42660	NP_001286969.1	141	uncharacterized protein Dmel_CG42661, isoform B
3L	NT_037436.4	7466286	7466887	+	10178939	CG42660	Dmel_CG42660	NP_001189061.1	141	uncharacterized protein Dmel_CG42661, isoform A
3L	NT_037436.4	7467319	7468262	+	10178939	CG42660	Dmel_CG42660	NP_001189063.1	236	tetraspanin 66A, isoform D
3L	NT_037436.4	7467319	7468262	+	10178939	CG42660	Dmel_CG42660	NP_729259.2	236	tetraspanin 66A, isoform C
3L	NT_037436.4	7467319	7468262	+	10178939	CG42660	Dmel_CG42660	NP_001261519.1	234	tetraspanin 66A, isoform F
3L	NT_037436.4	7467319	7468262	+	10178939	CG42660	Dmel_CG42660	NP_001261518.1	238	tetraspanin 66A, isoform E
3L	NT_037436.4	7469576	7470235	-	38837	CG8543	Dmel_CG8543	NP_648126.1	219	CG8543
3L	NT_037436.4	7471610	7472437	+	38838	CG8541	Dmel_CG8541	NP_648127.1	275	CG8541
3L	NT_037436.4	7475630	7476231	+	12798367	CG43292	Dmel_CG43292	NP_001246658.1	142	uncharacterized protein Dmel_CG43292
3L	NT_037436.4	7486070	7487843	+	38839	mthl6	Dmel_CG16992	NP_788473.1	480	methuselah-like 6
3L	NT_037436.4	7491864	7493484	+	38840	Cyp316a1	Dmel_CG8540	NP_648129.2	484	Cyp316a1
3L	NT_037436.4	7493618	7496059	-	38841	Cyp4d8	Dmel_CG4321	NP_523961.1	463	cytochrome P450-4d8
3L	NT_037436.4	7497393	7498633	-	38842	CG8539	Dmel_CG8539	NP_648130.2	385	CG8539, isoform A
3L	NT_037436.4	7497393	7498633	-	38842	CG8539	Dmel_CG8539	NP_001261520.1	385	CG8539, isoform B
3L	NT_037436.4	7505608	7506201	-	38843	CG7548	Dmel_CG7548	NP_648131.1	197	CG7548
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001246659.1	1298	CG7546, isoform E
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001137904.1	1346	CG7546, isoform D
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_729264.2	1166	CG7546, isoform B
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_648132.2	1332	CG7546, isoform A
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001137903.1	1199	CG7546, isoform C
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001261521.1	1167	CG7546, isoform F
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001261523.1	1332	CG7546, isoform H
3L	NT_037436.4	7511377	7516466	+	38844	CG7546	Dmel_CG7546	NP_001261522.1	1179	CG7546, isoform G
3L	NT_037436.4	7519685	7527047	+	38845	ltl	Dmel_CG32372	NP_001261524.1	817	larval translucida, isoform B
3L	NT_037436.4	7519685	7527047	+	38845	ltl	Dmel_CG32372	NP_729265.1	817	larval translucida, isoform A
3L	NT_037436.4	7532828	7537035	+	38846	lqf	Dmel_CG8532	NP_996013.1	831	liquid facets, isoform E
3L	NT_037436.4	7532828	7536740	+	38846	lqf	Dmel_CG8532	NP_001261527.1	637	liquid facets, isoform I
3L	NT_037436.4	7532828	7537035	+	38846	lqf	Dmel_CG8532	NP_729266.2	831	liquid facets, isoform A
3L	NT_037436.4	7532828	7537035	+	38846	lqf	Dmel_CG8532	NP_001261528.1	791	liquid facets, isoform J
3L	NT_037436.4	7533375	7536740	+	38846	lqf	Dmel_CG8532	NP_001261530.1	630	liquid facets, isoform L
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_001261529.1	784	liquid facets, isoform K
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_729268.2	784	liquid facets, isoform C
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_001097529.1	640	liquid facets, isoform F
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_001261526.1	784	liquid facets, isoform H
3L	NT_037436.4	7533375	7536740	+	38846	lqf	Dmel_CG8532	NP_001261525.1	630	liquid facets, isoform G
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_523962.2	824	liquid facets, isoform B
3L	NT_037436.4	7533375	7537035	+	38846	lqf	Dmel_CG8532	NP_729267.1	824	liquid facets, isoform D
3L	NT_037436.4	7539060	7539836	-	38847	CG16998	Dmel_CG16998	NP_648134.1	258	uncharacterized protein Dmel_CG16998
3L	NT_037436.4	7540269	7541168	-	38848	CG32374	Dmel_CG32374	NP_729270.1	299	uncharacterized protein Dmel_CG32374
3L	NT_037436.4	7541582	7542457	-	318002	CG32376	Dmel_CG32376	NP_729271.1	291	uncharacterized protein Dmel_CG32376
3L	NT_037436.4	7555868	7559822	-	38849	CG14837	Dmel_CG14837	NP_648136.2	760	uncharacterized protein Dmel_CG14837
3L	NT_037436.4	7563079	7569387	+	38850	frac	Dmel_CG7526	NP_001261532.1	1427	faulty attraction, isoform G
3L	NT_037436.4	7563079	7569387	+	38850	frac	Dmel_CG7526	NP_648137.3	1618	faulty attraction, isoform E
3L	NT_037436.4	7563079	7569387	+	38850	frac	Dmel_CG7526	NP_001261531.1	1427	faulty attraction, isoform F
3L	NT_037436.4	7563079	7569387	+	38850	frac	Dmel_CG7526	NP_996014.2	1618	faulty attraction, isoform D
3L	NT_037436.4	7563079	7569387	+	38850	frac	Dmel_CG7526	NP_001137905.1	1618	faulty attraction, isoform C
3L	NT_037436.4	7583507	7587188	+	38851	CG14838	Dmel_CG14838	NP_648138.1	1132	uncharacterized protein Dmel_CG14838
3L	NT_037436.4	7588732	7590918	-	38852	CG7716	Dmel_CG7716	NP_648139.1	728	CG7716
3L	NT_037436.4	7593278	7639037	+	2768948	Pura	Dmel_CG33275	NP_996016.2	1904	Puratrophin-1-like, isoform A
3L	NT_037436.4	7597254	7639037	+	2768948	Pura	Dmel_CG33275	NP_001261533.1	1898	Puratrophin-1-like, isoform D
3L	NT_037436.4	7617044	7639037	+	2768948	Pura	Dmel_CG33275	NP_996017.2	1428	Puratrophin-1-like, isoform B
3L	NT_037436.4	7633547	7639037	+	2768948	Pura	Dmel_CG33275	NP_996015.1	872	Puratrophin-1-like, isoform C
3L	NT_037436.4	7639891	7640441	-	2768949	Urm1	Dmel_CG33276	NP_996018.2	101	Ubiquitin-related modifier 1 ortholog
3L	NT_037436.4	7640815	7641583	-	38857	CG7506	Dmel_CG7506	NP_648144.3	236	CG7506
3L	NT_037436.4	7651205	7651765	+	38858	PGRP-SD	Dmel_CG7496	NP_648145.1	186	PGRP-SD
3L	NT_037436.4	7652310	7654091	-	38859	CG7492	Dmel_CG7492	NP_648146.1	573	CG7492
3L	NT_037436.4	7656187	7713161	-	38863	Ank2	Dmel_CG42734	NP_001097536.1	2532	ankyrin 2, isoform G
3L	NT_037436.4	7656187	7713161	-	38863	Ank2	Dmel_CG42734	NP_001286970.1	2566	ankyrin 2, isoform Y
3L	NT_037436.4	7656519	7716212	-	38863	Ank2	Dmel_CG42734	NP_001189069.1	4230	ankyrin 2, isoform P
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_729285.3	4083	ankyrin 2, isoform L
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_001189064.1	4329	ankyrin 2, isoform S
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_001189068.1	4223	ankyrin 2, isoform T
3L	NT_037436.4	7656519	7716212	-	38863	Ank2	Dmel_CG42734	NP_001189067.1	4352	ankyrin 2, isoform Q
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_001189070.1	13559	ankyrin 2, isoform U
3L	NT_037436.4	7656519	7717840	-	38863	Ank2	Dmel_CG42734	NP_001286971.1	4233	ankyrin 2, isoform Z
3L	NT_037436.4	7656519	7717840	-	38863	Ank2	Dmel_CG42734	NP_001097539.1	4264	ankyrin 2, isoform K
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_001097535.1	4114	ankyrin 2, isoform F
3L	NT_037436.4	7656519	7717840	-	38863	Ank2	Dmel_CG42734	NP_001189065.1	4496	ankyrin 2, isoform R
3L	NT_037436.4	7656519	7713161	-	38863	Ank2	Dmel_CG42734	NP_001097538.1	4189	ankyrin 2, isoform J
3L	NT_037436.4	7656519	7717840	-	38863	Ank2	Dmel_CG42734	NP_001261535.1	4373	ankyrin 2, isoform V
3L	NT_037436.4	7663820	7665904	-	14462837	CG44195	Dmel_CG44195	NP_001261538.1	694	uncharacterized protein Dmel_CG44195
3L	NT_037436.4	7665966	7713161	-	38863	Ank2	Dmel_CG42734	NP_001286972.1	11634	ankyrin 2, isoform AA
3L	NT_037436.4	7696627	7713161	-	38863	Ank2	Dmel_CG42734	NP_648148.2	2404	ankyrin 2, isoform M
3L	NT_037436.4	7705601	7713161	-	38863	Ank2	Dmel_CG42734	NP_001097533.1	1159	ankyrin 2, isoform N
3L	NT_037436.4	7705601	7717840	-	38863	Ank2	Dmel_CG42734	NP_001261536.1	1309	ankyrin 2, isoform W
3L	NT_037436.4	7709051	7717840	-	38863	Ank2	Dmel_CG42734	NP_001097534.1	697	ankyrin 2, isoform E
3L	NT_037436.4	7709051	7713161	-	38863	Ank2	Dmel_CG42734	NP_001261537.1	547	ankyrin 2, isoform X
3L	NT_037436.4	7719440	7721361	+	38864	CG12262	Dmel_CG12262	NP_648149.1	419	uncharacterized protein Dmel_CG12262
3L	NT_037436.4	7721898	7726355	-	38865	CG7457	Dmel_CG7457	NP_001303376.1	1405	CG7457, isoform B
3L	NT_037436.4	7721898	7726355	-	38865	CG7457	Dmel_CG7457	NP_648150.1	1405	CG7457, isoform A
3L	NT_037436.4	7727905	7731987	-	38866	CG8492	Dmel_CG8492	NP_648151.2	1360	CG8492
3L	NT_037436.4	7733453	7742078	-	38868	Snmp2	Dmel_CG7422	NP_001036593.1	510	sensory neuron membrane protein 2, isoform B
3L	NT_037436.4	7733453	7742078	-	38868	Snmp2	Dmel_CG7422	NP_001261539.1	556	sensory neuron membrane protein 2, isoform D
3L	NT_037436.4	7733453	7742078	-	38868	Snmp2	Dmel_CG7422	NP_001163372.1	556	sensory neuron membrane protein 2, isoform C
3L	NT_037436.4	7747617	7748627	+	38869	CG13685	Dmel_CG13685	NP_001303397.1	336	uncharacterized protein Dmel_CG13685, isoform D
3L	NT_037436.4	7747617	7748366	+	38869	CG13685	Dmel_CG13685	NP_001261541.1	249	uncharacterized protein Dmel_CG13685, isoform C
3L	NT_037436.4	7747617	7748504	+	38869	CG13685	Dmel_CG13685	NP_001261540.1	295	uncharacterized protein Dmel_CG13685, isoform B
3L	NT_037436.4	7747617	7748366	+	38869	CG13685	Dmel_CG13685	NP_648154.1	249	uncharacterized protein Dmel_CG13685, isoform A
3L	NT_037436.4	7754530	7754994	+	38870	CG7409	Dmel_CG7409	NP_648155.1	154	CG7409
3L	NT_037436.4	7757110	7759050	+	318000	CG32373	Dmel_CG32373	NP_001261534.1	486	uncharacterized protein Dmel_CG32373, isoform C
3L	NT_037436.4	7757110	7759050	+	318000	CG32373	Dmel_CG32373	NP_729293.1	486	uncharacterized protein Dmel_CG32373, isoform A
3L	NT_037436.4	7757110	7759050	+	318000	CG32373	Dmel_CG32373	NP_996019.1	486	uncharacterized protein Dmel_CG32373, isoform B
3L	NT_037436.4	7760627	7763074	+	38871	Hn	Dmel_CG7399	NP_523963.2	452	henna, isoform A
3L	NT_037436.4	7760627	7763074	+	38871	Hn	Dmel_CG7399	NP_001261542.1	452	henna, isoform C
3L	NT_037436.4	7761548	7763074	+	38871	Hn	Dmel_CG7399	NP_001014573.1	447	henna, isoform B
3L	NT_037436.4	7762413	7763074	+	38871	Hn	Dmel_CG7399	NP_001261543.1	178	henna, isoform D
3L	NT_037436.4	7764213	7767074	-	38872	Clk	Dmel_CG7391	NP_996021.2	895	clock, isoform H
3L	NT_037436.4	7764213	7770060	-	38872	Clk	Dmel_CG7391	NP_523964.2	1023	clock, isoform A
3L	NT_037436.4	7764213	7767074	-	38872	Clk	Dmel_CG7391	NP_729294.2	895	clock, isoform G
3L	NT_037436.4	7764213	7768712	-	38872	Clk	Dmel_CG7391	NP_001014574.1	961	clock, isoform F
3L	NT_037436.4	7764213	7770060	-	38872	Clk	Dmel_CG7391	NP_001014576.1	1027	clock, isoform D
3L	NT_037436.4	7767387	7768271	-	317999	CG32371	Dmel_CG32371	NP_729295.1	294	uncharacterized protein Dmel_CG32371
3L	NT_037436.4	7778470	7804406	-	38873	CG32369	Dmel_CG32369	NP_729296.1	1066	uncharacterized protein Dmel_CG32369, isoform A
3L	NT_037436.4	7778470	7804406	-	38873	CG32369	Dmel_CG32369	NP_001246660.1	1066	uncharacterized protein Dmel_CG32369, isoform C
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_001261546.1	281	PAR-domain protein 1, isoform N
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_001261545.1	275	PAR-domain protein 1, isoform M
3L	NT_037436.4	7816326	7831578	-	45588	Pdp1	Dmel_CG17888	NP_729302.2	633	PAR-domain protein 1, isoform J
3L	NT_037436.4	7816326	7867283	-	45588	Pdp1	Dmel_CG17888	NP_001261547.1	264	PAR-domain protein 1, isoform O
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_729299.1	270	PAR-domain protein 1, isoform B
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_729298.2	232	PAR-domain protein 1, isoform I
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_001286973.1	270	PAR-domain protein 1, isoform P
3L	NT_037436.4	7816326	7826586	-	45588	Pdp1	Dmel_CG17888	NP_729303.1	570	PAR-domain protein 1, isoform C
3L	NT_037436.4	7816326	7826586	-	45588	Pdp1	Dmel_CG17888	NP_001261544.1	581	PAR-domain protein 1, isoform L
3L	NT_037436.4	7816326	7831578	-	45588	Pdp1	Dmel_CG17888	NP_729301.1	647	PAR-domain protein 1, isoform D
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_524832.3	270	PAR-domain protein 1, isoform K
3L	NT_037436.4	7816326	7853285	-	45588	Pdp1	Dmel_CG17888	NP_729300.1	284	PAR-domain protein 1, isoform G
3L	NT_037436.4	7816326	7867283	-	45588	Pdp1	Dmel_CG17888	NP_729297.1	250	PAR-domain protein 1, isoform F
3L	NT_037436.4	7869592	7894494	+	38876	CG32365	Dmel_CG32365	NP_001286974.1	628	uncharacterized protein Dmel_CG32365, isoform B
3L	NT_037436.4	7869592	7894494	+	38876	CG32365	Dmel_CG32365	NP_729304.1	628	uncharacterized protein Dmel_CG32365, isoform A
3L	NT_037436.4	7895039	7895847	+	38878	eIF4E-5	Dmel_CG8277	NP_648160.2	232	eIF4E-5
3L	NT_037436.4	7896724	7903236	-	38879	pbl	Dmel_CG8114	NP_729307.1	782	pebble, isoform C
3L	NT_037436.4	7896724	7911458	-	38879	pbl	Dmel_CG8114	NP_729306.1	853	pebble, isoform A
3L	NT_037436.4	7896724	7909338	-	38879	pbl	Dmel_CG8114	NP_001097540.1	900	pebble, isoform E
3L	NT_037436.4	7896724	7898743	-	38879	pbl	Dmel_CG8114	NP_001246661.1	567	pebble, isoform F
3L	NT_037436.4	7896724	7911458	-	38879	pbl	Dmel_CG8114	NP_523965.2	1311	pebble, isoform B
3L	NT_037436.4	7896724	7903236	-	38879	pbl	Dmel_CG8114	NP_729308.1	1240	pebble, isoform D
3L	NT_037436.4	7912607	7913653	+	38880	CG8281	Dmel_CG8281	NP_648161.1	348	CG8281
3L	NT_037436.4	7913786	7915033	-	38881	CG8111	Dmel_CG8111	NP_648162.2	376	CG8111
3L	NT_037436.4	7915493	7915759	+	317997	CG32368	Dmel_CG32368	NP_729310.1	88	uncharacterized protein Dmel_CG32368
3L	NT_037436.4	7926734	7933987	-	43905	syd	Dmel_CG8110	NP_729311.2	1194	sunday driver, isoform B
3L	NT_037436.4	7926734	7935479	-	43905	syd	Dmel_CG8110	NP_001286975.1	1214	sunday driver, isoform K
3L	NT_037436.4	7926734	7935479	-	43905	syd	Dmel_CG8110	NP_001261552.1	1220	sunday driver, isoform I
3L	NT_037436.4	7926734	7935479	-	43905	syd	Dmel_CG8110	NP_524652.1	1227	sunday driver, isoform A
3L	NT_037436.4	7926734	7933987	-	43905	syd	Dmel_CG8110	NP_001163374.1	1188	sunday driver, isoform D
3L	NT_037436.4	7926734	7935479	-	43905	syd	Dmel_CG8110	NP_001261549.1	1214	sunday driver, isoform F
3L	NT_037436.4	7926831	7935479	-	43905	syd	Dmel_CG8110	NP_001261551.1	1208	sunday driver, isoform H
3L	NT_037436.4	7926831	7935479	-	43905	syd	Dmel_CG8110	NP_001261548.1	1202	sunday driver, isoform E
3L	NT_037436.4	7926831	7935479	-	43905	syd	Dmel_CG8110	NP_001163373.1	1215	sunday driver, isoform C
3L	NT_037436.4	7927564	7935479	-	43905	syd	Dmel_CG8110	NP_001261553.1	1211	sunday driver, isoform J
3L	NT_037436.4	7927564	7935479	-	43905	syd	Dmel_CG8110	NP_001261550.1	1205	sunday driver, isoform G
3L	NT_037436.4	7936475	7936773	+	38883	Srp9	Dmel_CG8268	NP_648163.1	77	signal recognition particle protein 9
3L	NT_037436.4	7945742	7946284	-	14462838	CG43880	Dmel_CG43880	NP_001261554.1	162	uncharacterized protein Dmel_CG43880
3L	NT_037436.4	7948366	7950943	+	38884	exex	Dmel_CG8254	NP_648164.1	525	extra-extra
3L	NT_037436.4	7970669	7971845	+	38885	RNaseX25	Dmel_CG8194	NP_523966.2	325	ribonuclease X25
3L	NT_037436.4	7972561	7974901	-	38886	CG8042	Dmel_CG8042	NP_648165.1	656	CG8042
3L	NT_037436.4	7975650	7976044	-	38887	HP4	Dmel_CG8044	NP_648166.2	106	heterochromatin protein 4, isoform A
3L	NT_037436.4	7975742	7976044	-	38887	HP4	Dmel_CG8044	NP_729314.1	100	heterochromatin protein 4, isoform B
3L	NT_037436.4	7976525	7977669	+	38888	CG8209	Dmel_CG8209	NP_648167.1	331	CG8209
3L	NT_037436.4	7977985	7978605	-	38889	CG8038	Dmel_CG8038	NP_648168.1	206	CG8038
3L	NT_037436.4	7980819	8049923	+	38890	nmo	Dmel_CG7892	NP_729317.1	430	nemo, isoform F
3L	NT_037436.4	7980819	8048076	+	38890	nmo	Dmel_CG7892	NP_729320.1	414	nemo, isoform B
3L	NT_037436.4	7980819	8049923	+	38890	nmo	Dmel_CG7892	NP_729316.1	430	nemo, isoform E
3L	NT_037436.4	7980819	8049923	+	38890	nmo	Dmel_CG7892	NP_001261555.1	430	nemo, isoform H
3L	NT_037436.4	7980819	8048076	+	38890	nmo	Dmel_CG7892	NP_729319.1	414	nemo, isoform A
3L	NT_037436.4	7980819	8048076	+	38890	nmo	Dmel_CG7892	NP_523967.2	414	nemo, isoform C
3L	NT_037436.4	7980819	8049923	+	38890	nmo	Dmel_CG7892	NP_729318.1	430	nemo, isoform G
3L	NT_037436.4	8054645	8058046	-	38891	bip1	Dmel_CG7574	NP_648169.2	419	bip1, isoform A
3L	NT_037436.4	8054645	8056064	-	38891	bip1	Dmel_CG7574	NP_001163375.1	327	bip1, isoform B
3L	NT_037436.4	8068425	8069267	-	8674107	CG42590	Dmel_CG42590	NP_001163376.1	280	uncharacterized protein Dmel_CG42590
3L	NT_037436.4	8069459	8069938	-	8674006	CG42591	Dmel_CG42591	NP_001163377.1	159	uncharacterized protein Dmel_CG42591
3L	NT_037436.4	8071800	8108723	+	38895	Ect4	Dmel_CG43119	NP_001246662.1	1730	Ectoderm-expressed 4, isoform I
3L	NT_037436.4	8071800	8108292	+	38895	Ect4	Dmel_CG43119	NP_001261556.1	1704	Ectoderm-expressed 4, isoform K
3L	NT_037436.4	8074475	8108723	+	38895	Ect4	Dmel_CG43119	NP_001097541.1	1637	Ectoderm-expressed 4, isoform D
3L	NT_037436.4	8079516	8108723	+	38895	Ect4	Dmel_CG43119	NP_001097544.1	1562	Ectoderm-expressed 4, isoform G
3L	NT_037436.4	8087998	8091637	-	38893	CG7565	Dmel_CG7565	NP_648171.1	1069	CG7565
3L	NT_037436.4	8098469	8108292	+	38895	Ect4	Dmel_CG43119	NP_001036594.1	1360	Ectoderm-expressed 4, isoform F
3L	NT_037436.4	8098469	8108723	+	38895	Ect4	Dmel_CG43119	NP_001097545.1	1386	Ectoderm-expressed 4, isoform H
3L	NT_037436.4	8098469	8108323	+	38895	Ect4	Dmel_CG43119	NP_001246663.1	1059	Ectoderm-expressed 4, isoform J
3L	NT_037436.4	8101992	8105752	+	38895	Ect4	Dmel_CG43119	NP_729327.1	1052	Ectoderm-expressed 4, isoform E
3L	NT_037436.4	8109278	8109934	+	43926	fan	Dmel_CG7919	NP_524657.2	218	farinelli
3L	NT_037436.4	8110499	8113172	+	38897	CG7927	Dmel_CG7927	NP_001261558.1	702	CG7927, isoform C
3L	NT_037436.4	8110499	8113172	+	38897	CG7927	Dmel_CG7927	NP_648174.3	702	CG7927, isoform A
3L	NT_037436.4	8110499	8112795	+	38897	CG7927	Dmel_CG7927	NP_001261557.1	653	CG7927, isoform B
3L	NT_037436.4	8113956	8115725	-	38898	Arp3	Dmel_CG7558	NP_523968.1	418	Actin-related protein 3, isoform A
3L	NT_037436.4	8113956	8115725	-	38898	Arp3	Dmel_CG7558	NP_001261559.1	418	Actin-related protein 3, isoform B
3L	NT_037436.4	8116440	8121011	+	44747	msk	Dmel_CG7935	NP_524780.1	1049	moleskin
3L	NT_037436.4	8121919	8123578	+	38900	ldbr	Dmel_CG7942	NP_996022.1	534	lariat debranching enzyme
3L	NT_037436.4	8123737	8124459	-	38901	CG7550	Dmel_CG7550	NP_648176.1	240	CG7550
3L	NT_037436.4	8124652	8125038	-	59151	mRpL36	Dmel_CG18767	NP_652658.1	128	mitochondrial ribosomal protein L36
3L	NT_037436.4	8125439	8127704	-	44496	Uba2	Dmel_CG7528	NP_524756.2	700	ubiquitin activating enzyme 2
3L	NT_037436.4	8128259	8130833	+	43950	CdsA	Dmel_CG7962	NP_001286976.1	447	CDP diglyceride synthetase, isoform B
3L	NT_037436.4	8128259	8130833	+	43950	CdsA	Dmel_CG7962	NP_524661.1	447	CDP diglyceride synthetase, isoform A
3L	NT_037436.4	8131797	8137213	-	38904	CG7504	Dmel_CG7504	NP_001137907.1	1676	CG7504, isoform B
3L	NT_037436.4	8131797	8137213	-	38904	CG7504	Dmel_CG7504	NP_648177.1	1417	CG7504, isoform C
3L	NT_037436.4	8137837	8141835	+	38905	mus301	Dmel_CG7972	NP_648178.1	1051	mutagen-sensitive 301
3L	NT_037436.4	8142631	8146415	-	38906	CG13676	Dmel_CG13676	NP_648179.3	883	uncharacterized protein Dmel_CG13676, isoform A
3L	NT_037436.4	8142696	8146415	-	38906	CG13676	Dmel_CG13676	NP_001261560.1	665	uncharacterized protein Dmel_CG13676, isoform B
3L	NT_037436.4	8154924	8155187	-	8674111	CG42445	Dmel_CG42445	NP_001261561.1	87	uncharacterized protein Dmel_CG42445, isoform B
3L	NT_037436.4	8154924	8155187	-	8674111	CG42445	Dmel_CG42445	NP_001163378.1	87	uncharacterized protein Dmel_CG42445, isoform A
3L	NT_037436.4	8159426	8159641	-	14462840	CG43886	Dmel_CG43886	NP_001261562.1	71	uncharacterized protein Dmel_CG43886
3L	NT_037436.4	8160554	8164360	-	38907	CG13675	Dmel_CG13675	NP_001261563.1	355	uncharacterized protein Dmel_CG13675, isoform D
3L	NT_037436.4	8161166	8164360	-	38907	CG13675	Dmel_CG13675	NP_001097546.2	151	uncharacterized protein Dmel_CG13675, isoform C
3L	NT_037436.4	8170819	8175856	-	53438	RecQ4	Dmel_CG7487	NP_652607.1	1579	RecQ4 helicase
3L	NT_037436.4	8176426	8178327	-	38909	Nmt	Dmel_CG7436	NP_523969.1	472	N-myristoyl transferase
3L	NT_037436.4	8178676	8180514	-	38910	mthl7	Dmel_CG7476	NP_788475.1	475	methuselah-like 7, isoform B
3L	NT_037436.4	8178676	8180514	-	38910	mthl7	Dmel_CG7476	NP_648181.2	491	methuselah-like 7, isoform A
3L	NT_037436.4	8181041	8182720	+	38911	CG7979	Dmel_CG7979	NP_648182.1	441	CG7979
3L	NT_037436.4	8183519	8185589	-	38912	ERR	Dmel_CG7404	NP_648183.3	496	estrogen-related receptor, isoform B
3L	NT_037436.4	8183519	8185029	-	38912	ERR	Dmel_CG7404	NP_729340.1	484	estrogen-related receptor, isoform A
3L	NT_037436.4	8187506	8189977	+	38913	Atg18a	Dmel_CG7986	NP_996023.1	377	Autophagy-related 18a, isoform C
3L	NT_037436.4	8187506	8189977	+	38913	Atg18a	Dmel_CG7986	NP_648184.1	377	Autophagy-related 18a, isoform A
3L	NT_037436.4	8187506	8189977	+	38913	Atg18a	Dmel_CG7986	NP_729341.1	377	Autophagy-related 18a, isoform B
3L	NT_037436.4	8187506	8189977	+	38913	Atg18a	Dmel_CG7986	NP_001286977.1	377	Autophagy-related 18a, isoform G
3L	NT_037436.4	8187506	8189977	+	38913	Atg18a	Dmel_CG7986	NP_001261566.1	372	Autophagy-related 18a, isoform F
3L	NT_037436.4	8187506	8190268	+	38913	Atg18a	Dmel_CG7986	NP_001261565.1	447	Autophagy-related 18a, isoform E
3L	NT_037436.4	8187506	8190268	+	38913	Atg18a	Dmel_CG7986	NP_001261564.1	435	Autophagy-related 18a, isoform D
3L	NT_037436.4	8191389	8196475	+	38914	MED24	Dmel_CG7999	NP_648185.1	993	mediator complex subunit 24
3L	NT_037436.4	8191572	8193008	-	38915	CG7387	Dmel_CG7387	NP_648186.3	449	CG7387
3L	NT_037436.4	8196740	8197621	-	38916	UbcE2M	Dmel_CG7375	NP_001261568.1	181	ubiquitin conjugating enzyme E2M, isoform C
3L	NT_037436.4	8196740	8197621	-	38916	UbcE2M	Dmel_CG7375	NP_001261567.1	181	ubiquitin conjugating enzyme E2M, isoform B
3L	NT_037436.4	8196740	8197621	-	38916	UbcE2M	Dmel_CG7375	NP_648187.1	181	ubiquitin conjugating enzyme E2M, isoform A
3L	NT_037436.4	8198292	8199456	+	38917	CG8005	Dmel_CG8005	NP_648188.2	368	CG8005, isoform A
3L	NT_037436.4	8198292	8198591	+	38917	CG8005	Dmel_CG8005	NP_001261569.1	76	CG8005, isoform B
3L	NT_037436.4	8201157	8202326	-	38918	CG7366	Dmel_CG7366	NP_648189.1	389	CG7366
3L	NT_037436.4	8202859	8203283	+	38919	CG13679	Dmel_CG13679	NP_729345.1	119	uncharacterized protein Dmel_CG13679
3L	NT_037436.4	8209858	8210671	-	317996	tut	Dmel_CG32364	NP_729346.1	230	tumorous testis
3L	NT_037436.4	8211965	8213476	+	38920	CG8006	Dmel_CG8006	NP_648191.1	503	CG8006
3L	NT_037436.4	8215502	8215818	+	50305	CG8012	Dmel_CG8012	NP_652448.1	82	CG8012, isoform A
3L	NT_037436.4	8215502	8215818	+	50305	CG8012	Dmel_CG8012	NP_001246664.1	82	CG8012, isoform B
3L	NT_037436.4	8218439	8218917	-	38921	CG13674	Dmel_CG13674	NP_648192.1	137	uncharacterized protein Dmel_CG13674, isoform A
3L	NT_037436.4	8218439	8218917	-	38921	CG13674	Dmel_CG13674	NP_001261570.1	137	uncharacterized protein Dmel_CG13674, isoform B
3L	NT_037436.4	8222203	8222841	+	38922	CG13678	Dmel_CG13678	NP_648193.1	128	uncharacterized protein Dmel_CG13678
3L	NT_037436.4	8229382	8230421	+	38923	eIF4E-3	Dmel_CG8023	NP_648194.1	244	eukaryotic translation initiation factor 4E-3
3L	NT_037436.4	8231964	8240477	-	38924	CG7213	Dmel_CG7213	NP_648195.1	449	CG7213
3L	NT_037436.4	8248900	8280907	+	2769008	Dscam4	Dmel_CG42330	NP_001137908.1	1918	down syndrome cell adhesion molecule 4, isoform D
3L	NT_037436.4	8248900	8280907	+	2769008	Dscam4	Dmel_CG42330	NP_001261572.1	1935	down syndrome cell adhesion molecule 4, isoform J
3L	NT_037436.4	8248900	8280907	+	2769008	Dscam4	Dmel_CG42330	NP_001261571.1	1935	down syndrome cell adhesion molecule 4, isoform I
3L	NT_037436.4	8248900	8280759	+	2769008	Dscam4	Dmel_CG42330	NP_001137909.1	1874	down syndrome cell adhesion molecule 4, isoform H
3L	NT_037436.4	8248900	8280907	+	2769008	Dscam4	Dmel_CG42330	NP_001036596.2	1918	down syndrome cell adhesion molecule 4, isoform E
3L	NT_037436.4	8283086	8286192	-	38928	cert	Dmel_CG7207	NP_001261573.1	329	ceramide transfer protein, isoform B
3L	NT_037436.4	8283086	8289448	-	38928	cert	Dmel_CG7207	NP_001286978.1	601	ceramide transfer protein, isoform C
3L	NT_037436.4	8283086	8289448	-	38928	cert	Dmel_CG7207	NP_648199.1	601	ceramide transfer protein, isoform A
3L	NT_037436.4	8290584	8291745	-	38929	CG7201	Dmel_CG7201	NP_648200.1	345	CG7201, isoform A
3L	NT_037436.4	8290584	8291745	-	38929	CG7201	Dmel_CG7201	NP_001261574.1	345	CG7201, isoform B
3L	NT_037436.4	8297260	8298224	+	38930	Rab19	Dmel_CG7062	NP_523970.1	219	Rab19, isoform A
3L	NT_037436.4	8297260	8298224	+	38930	Rab19	Dmel_CG7062	NP_001261575.1	219	Rab19, isoform B
3L	NT_037436.4	8298751	8299290	-	38931	Arl5	Dmel_CG7197	NP_648201.1	179	ADP-ribosylation factor-like 5
3L	NT_037436.4	8300116	8302212	+	38932	CG13671	Dmel_CG13671	NP_648202.1	698	uncharacterized protein Dmel_CG13671
3L	NT_037436.4	8302619	8303990	-	38933	CG7194	Dmel_CG7194	NP_648203.1	346	CG7194
3L	NT_037436.4	8304193	8305248	+	38934	Sbp2	Dmel_CG7066	NP_648204.1	313	SECIS-binding protein 2
3L	NT_037436.4	8305336	8306980	-	38935	Gr66a	Dmel_CG7189	NP_523971.3	527	gustatory receptor 66a
3L	NT_037436.4	8307336	8308763	-	38936	BI-1	Dmel_CG7188	NP_648205.1	245	Bax Inhibitor-1, isoform A
3L	NT_037436.4	8307712	8308763	-	38936	BI-1	Dmel_CG7188	NP_729358.1	237	Bax Inhibitor-1, isoform B
3L	NT_037436.4	8311031	8315137	-	38937	CG7185	Dmel_CG7185	NP_001246665.1	605	CG7185, isoform B
3L	NT_037436.4	8311031	8315137	-	38937	CG7185	Dmel_CG7185	NP_648206.1	652	CG7185, isoform A
3L	NT_037436.4	8318587	8318868	-	12798369	CG43059	Dmel_CG43059	NP_001246666.1	77	uncharacterized protein Dmel_CG43059
3L	NT_037436.4	8320836	8322194	+	38938	CG13670	Dmel_CG13670	NP_648207.1	266	uncharacterized protein Dmel_CG13670
3L	NT_037436.4	8326023	8327015	+	5740547	CG34461	Dmel_CG34461	NP_001097547.1	138	uncharacterized protein Dmel_CG34461, isoform A
3L	NT_037436.4	8326023	8327015	+	5740547	CG34461	Dmel_CG34461	NP_001261576.1	138	uncharacterized protein Dmel_CG34461, isoform B
3L	NT_037436.4	8328680	8330116	+	5740319	CG34462	Dmel_CG34462	NP_001097548.1	312	uncharacterized protein Dmel_CG34462
3L	NT_037436.4	8336737	8338148	+	38940	Cpr66Cb	Dmel_CG7076	NP_648209.1	162	cuticular protein 66Cb
3L	NT_037436.4	8339155	8340175	+	38941	Pex2	Dmel_CG7081	NP_648210.1	281	peroxin 2
3L	NT_037436.4	8341153	8342469	+	38943	CG7083	Dmel_CG7083	NP_648211.1	438	CG7083
3L	NT_037436.4	8342975	8344347	+	38942	DNApol-alpha50	Dmel_CG7108	NP_523972.2	438	DNA polymerase alpha 50kD
3L	NT_037436.4	8344528	8346069	-	38944	CG7182	Dmel_CG7182	NP_001286979.1	513	CG7182, isoform B
3L	NT_037436.4	8344528	8346069	-	38944	CG7182	Dmel_CG7182	NP_648212.1	513	CG7182, isoform A
3L	NT_037436.4	8347170	8351934	+	38945	GAPcenA	Dmel_CG7112	NP_001097549.1	1194	GTPase activating protein and centrosome-associated, isoform B
3L	NT_037436.4	8347876	8351388	+	38945	GAPcenA	Dmel_CG7112	NP_648213.1	1005	GTPase activating protein and centrosome-associated, isoform A
3L	NT_037436.4	8352529	8356208	-	38946	Culd	Dmel_CG17352	NP_729364.1	965	CUB and LDLa domain, isoform A
3L	NT_037436.4	8353218	8356208	-	38946	Culd	Dmel_CG17352	NP_729365.1	740	CUB and LDLa domain, isoform B
3L	NT_037436.4	8353438	8356208	-	38946	Culd	Dmel_CG17352	NP_648214.2	684	CUB and LDLa domain, isoform C
3L	NT_037436.4	8355601	8356208	-	38946	Culd	Dmel_CG17352	NP_001097550.1	181	CUB and LDLa domain, isoform E
3L	NT_037436.4	8356655	8357905	-	44291	Idh	Dmel_CG7176	NP_729370.1	416	isocitrate dehydrogenase, isoform F
3L	NT_037436.4	8356655	8357905	-	44291	Idh	Dmel_CG7176	NP_729368.1	416	isocitrate dehydrogenase, isoform A
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_788476.1	450	isocitrate dehydrogenase, isoform G
3L	NT_037436.4	8356655	8358048	-	44291	Idh	Dmel_CG7176	NP_729367.1	437	isocitrate dehydrogenase, isoform D
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_652044.1	469	isocitrate dehydrogenase, isoform C
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_729369.2	450	isocitrate dehydrogenase, isoform I
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_001137910.2	479	isocitrate dehydrogenase, isoform K
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_729366.1	450	isocitrate dehydrogenase, isoform B
3L	NT_037436.4	8356655	8358657	-	44291	Idh	Dmel_CG7176	NP_001137911.1	450	isocitrate dehydrogenase, isoform J
3L	NT_037436.4	8374976	8390333	+	45879	ImpE1	Dmel_CG32356	NP_524849.2	1616	Ecdysone-inducible gene E1, isoform A
3L	NT_037436.4	8374976	8380026	+	45879	ImpE1	Dmel_CG32356	NP_729371.1	146	Ecdysone-inducible gene E1, isoform B
3L	NT_037436.4	8374976	8390333	+	45879	ImpE1	Dmel_CG32356	NP_001261577.1	1616	Ecdysone-inducible gene E1, isoform C
3L	NT_037436.4	8391558	8392340	+	38952	Jon66Ci	Dmel_CG7118	NP_729372.1	260	jonah 66Ci
3L	NT_037436.4	8392858	8393646	-	38953	Jon66Cii	Dmel_CG7170	NP_648217.1	262	jonah 66Cii
3L	NT_037436.4	8399676	8401978	+	38954	CG7120	Dmel_CG7120	NP_001261578.1	701	CG7120, isoform G
3L	NT_037436.4	8399676	8401978	+	38954	CG7120	Dmel_CG7120	NP_648218.2	686	CG7120, isoform E
3L	NT_037436.4	8399676	8401978	+	38954	CG7120	Dmel_CG7120	NP_001246668.1	686	CG7120, isoform D
3L	NT_037436.4	8399676	8401978	+	38954	CG7120	Dmel_CG7120	NP_001246667.1	701	CG7120, isoform F
3L	NT_037436.4	8402477	8404508	-	318833	CG33057	Dmel_CG33057	NP_729375.1	659	monkey king protein, isoform A
3L	NT_037436.4	8402477	8404508	-	318833	CG33057	Dmel_CG33057	NP_001286981.1	659	monkey king protein, isoform D
3L	NT_037436.4	8402477	8404508	-	318833	CG33057	Dmel_CG33057	NP_648219.1	659	monkey king protein, isoform B
3L	NT_037436.4	8404559	8405197	-	318833	CG33057	Dmel_CG33057	NP_001286980.1	212	uncharacterized protein Dmel_CG33057, isoform B
3L	NT_037436.4	8404559	8405197	-	318833	CG33057	Dmel_CG33057	NP_788477.1	212	uncharacterized protein Dmel_CG33057, isoform A
3L	NT_037436.4	8405540	8407288	+	38956	CG13667	Dmel_CG13667	NP_648220.1	582	uncharacterized protein Dmel_CG13667, isoform A
3L	NT_037436.4	8405540	8407288	+	38956	CG13667	Dmel_CG13667	NP_729378.1	582	uncharacterized protein Dmel_CG13667, isoform B
3L	NT_037436.4	8407371	8411493	-	38957	Oseg1	Dmel_CG7161	NP_001286982.1	1169	outer segment 1, isoform B
3L	NT_037436.4	8407371	8411493	-	38957	Oseg1	Dmel_CG7161	NP_648221.3	1169	outer segment 1, isoform A
3L	NT_037436.4	8411961	8415818	+	38959	Exo70	Dmel_CG7127	NP_648222.3	693	exocyst 70
3L	NT_037436.4	8413075	8413728	+	38958	mtrm	Dmel_CG18543	NP_648223.1	217	matrimony
3L	NT_037436.4	8415980	8421066	-	50302	CG32354	Dmel_CG32354	NP_729380.1	662	uncharacterized protein Dmel_CG32354
3L	NT_037436.4	8425309	8427409	+	38961	Cbl	Dmel_CG7037	NP_729382.1	448	Cbl proto-oncogene, isoform A
3L	NT_037436.4	8425309	8430336	+	38961	Cbl	Dmel_CG7037	NP_648224.1	878	Cbl proto-oncogene, isoform B
3L	NT_037436.4	8434469	8438229	-	38963	Unr	Dmel_CG7015	NP_648226.2	1039	upstream of N-ras, isoform A
3L	NT_037436.4	8434469	8438229	-	38963	Unr	Dmel_CG7015	NP_001137912.1	1057	upstream of N-ras, isoform B
3L	NT_037436.4	8434469	8438229	-	38963	Unr	Dmel_CG7015	NP_001246669.1	1032	upstream of N-ras, isoform C
3L	NT_037436.4	8434469	8438229	-	38963	Unr	Dmel_CG7015	NP_001286983.1	1057	upstream of N-ras, isoform E
3L	NT_037436.4	8434469	8438229	-	38963	Unr	Dmel_CG7015	NP_001261579.1	1057	upstream of N-ras, isoform D
3L	NT_037436.4	8444047	8449185	-	38964	CG6983	Dmel_CG6983	NP_001286984.1	180	CG6983, isoform B
3L	NT_037436.4	8444047	8449185	-	38964	CG6983	Dmel_CG6983	NP_648227.1	180	CG6983, isoform A
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_996025.1	1985	grunge, isoform D
3L	NT_037436.4	8462041	8471167	+	46156	Gug	Dmel_CG6964	NP_001261581.1	2007	grunge, isoform J
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_001246670.1	1985	grunge, isoform E
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_523973.2	1985	grunge, isoform H
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_788478.1	1988	grunge, isoform C
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_659574.1	1966	grunge, isoform A
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_001246672.1	2006	grunge, isoform G
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_001261580.1	1983	grunge, isoform I
3L	NT_037436.4	8462041	8470770	+	46156	Gug	Dmel_CG6964	NP_001246671.1	1988	grunge, isoform F
3L	NT_037436.4	8473007	8494262	-	38966	CG43163	Dmel_CG43163	NP_648228.2	2523	uncharacterized protein Dmel_CG43163, isoform C
3L	NT_037436.4	8473007	8494262	-	38966	CG43163	Dmel_CG43163	NP_001246673.1	2523	uncharacterized protein Dmel_CG43163, isoform D
3L	NT_037436.4	8507598	8509644	-	38968	ZC3H3	Dmel_CG6694	NP_648230.1	597	ZC3H3
3L	NT_037436.4	8510085	8512524	+	38969	CG6745	Dmel_CG6745	NP_648231.1	734	CG6745
3L	NT_037436.4	8514196	8514847	-	38970	CG6683	Dmel_CG6683	NP_648232.1	197	CG6683
3L	NT_037436.4	8515089	8517658	+	38971	CG6765	Dmel_CG6765	NP_648233.1	681	CG6765, isoform A
3L	NT_037436.4	8515089	8517658	+	38971	CG6765	Dmel_CG6765	NP_001261582.1	681	CG6765, isoform B
3L	NT_037436.4	8515089	8517430	+	38971	CG6765	Dmel_CG6765	NP_001261583.1	623	CG6765, isoform C
3L	NT_037436.4	8518954	8520209	+	38972	GstO3	Dmel_CG6776	NP_648234.1	241	glutathione S transferase O3
3L	NT_037436.4	8520590	8521434	+	38973	se	Dmel_CG6781	NP_648235.1	243	sepia
3L	NT_037436.4	8521535	8523431	-	38974	GstO2	Dmel_CG6673	NP_729388.1	251	glutathione S transferase O2, isoform A
3L	NT_037436.4	8522500	8523431	-	38974	GstO2	Dmel_CG6673	NP_648236.1	250	glutathione S transferase O2, isoform B
3L	NT_037436.4	8523867	8524802	-	38975	GstO1	Dmel_CG6662	NP_648237.1	254	glutathione S transferase O1
3L	NT_037436.4	8530721	8533105	+	38976	foi	Dmel_CG6817	NP_001261585.1	706	fear-of-intimacy, isoform C
3L	NT_037436.4	8530721	8533105	+	38976	foi	Dmel_CG6817	NP_523974.3	706	fear-of-intimacy, isoform A
3L	NT_037436.4	8530721	8533105	+	38976	foi	Dmel_CG6817	NP_001261584.1	706	fear-of-intimacy, isoform B
3L	NT_037436.4	8530721	8533105	+	38976	foi	Dmel_CG6817	NP_001286985.1	706	fear-of-intimacy, isoform D
3L	NT_037436.4	8535006	8537118	+	44679	ergic53	Dmel_CG6822	NP_788479.1	512	ergic53, isoform B
3L	NT_037436.4	8535006	8537118	+	44679	ergic53	Dmel_CG6822	NP_524776.1	512	ergic53, isoform A
3L	NT_037436.4	8561482	8564006	+	38978	rhea	Dmel_CG6831	NP_001261589.1	513	rhea, isoform I
3L	NT_037436.4	8561482	8573789	+	38978	rhea	Dmel_CG6831	NP_001261588.1	2689	rhea, isoform H
3L	NT_037436.4	8561482	8573789	+	38978	rhea	Dmel_CG6831	NP_001261586.1	2836	rhea, isoform E
3L	NT_037436.4	8561482	8570434	+	38978	rhea	Dmel_CG6831	NP_001246675.1	2169	rhea, isoform C
3L	NT_037436.4	8561482	8573789	+	38978	rhea	Dmel_CG6831	NP_001246674.1	2836	rhea, isoform B
3L	NT_037436.4	8561482	8573789	+	38978	rhea	Dmel_CG6831	NP_648238.1	2836	rhea, isoform F
3L	NT_037436.4	8561482	8573789	+	38978	rhea	Dmel_CG6831	NP_001261587.1	2815	rhea, isoform G
3L	NT_037436.4	8561482	8570434	+	38978	rhea	Dmel_CG6831	NP_001246676.1	2169	rhea, isoform D
3L	NT_037436.4	8574575	8575995	-	38979	CG6638	Dmel_CG6638	NP_648239.1	420	CG6638
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001261591.1	2514	uncharacterized protein Dmel_CG43078, isoform L
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001286986.1	2509	uncharacterized protein Dmel_CG43078, isoform N
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001261590.1	2464	uncharacterized protein Dmel_CG43078, isoform K
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001246680.1	2509	uncharacterized protein Dmel_CG43078, isoform J
3L	NT_037436.4	8579513	8596107	+	38981	CG43078	Dmel_CG43078	NP_001163380.1	1678	uncharacterized protein Dmel_CG43078, isoform E
3L	NT_037436.4	8579513	8589218	+	38981	CG43078	Dmel_CG43078	NP_001163379.1	984	uncharacterized protein Dmel_CG43078, isoform D
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001246678.1	2540	uncharacterized protein Dmel_CG43078, isoform H
3L	NT_037436.4	8579513	8596107	+	38981	CG43078	Dmel_CG43078	NP_729389.1	1709	uncharacterized protein Dmel_CG43078, isoform B
3L	NT_037436.4	8579513	8598908	+	38981	CG43078	Dmel_CG43078	NP_001261592.1	2428	uncharacterized protein Dmel_CG43078, isoform M
3L	NT_037436.4	8583730	8596107	+	38981	CG43078	Dmel_CG43078	NP_729390.1	1653	uncharacterized protein Dmel_CG43078, isoform A
3L	NT_037436.4	8587902	8598908	+	38981	CG43078	Dmel_CG43078	NP_001246679.1	1957	uncharacterized protein Dmel_CG43078, isoform I
3L	NT_037436.4	8587902	8596107	+	38981	CG43078	Dmel_CG43078	NP_729391.1	1126	uncharacterized protein Dmel_CG43078, isoform C
3L	NT_037436.4	8590611	8598908	+	38981	CG43078	Dmel_CG43078	NP_001246677.1	2455	uncharacterized protein Dmel_CG43078, isoform G
3L	NT_037436.4	8599690	8600743	-	38982	Nelf-E	Dmel_CG5994	NP_648241.1	280	negative elongation factor E
3L	NT_037436.4	8601035	8602303	+	38983	RpL14	Dmel_CG6253	NP_523975.1	166	ribosomal protein L14
3L	NT_037436.4	8602515	8603997	-	38984	CG5989	Dmel_CG5989	NP_648242.1	436	CG5989, isoform A
3L	NT_037436.4	8602515	8603997	-	38984	CG5989	Dmel_CG5989	NP_001261594.1	425	CG5989, isoform C
3L	NT_037436.4	8602515	8603997	-	38984	CG5989	Dmel_CG5989	NP_001261593.1	434	CG5989, isoform B
3L	NT_037436.4	8610165	8615411	+	38985	CG6282	Dmel_CG6282	NP_001163381.1	316	CG6282, isoform C
3L	NT_037436.4	8610165	8615900	+	38985	CG6282	Dmel_CG6282	NP_001261595.1	479	CG6282, isoform D
3L	NT_037436.4	8610165	8615411	+	38985	CG6282	Dmel_CG6282	NP_648243.1	316	CG6282, isoform A
3L	NT_037436.4	8610165	8615411	+	38985	CG6282	Dmel_CG6282	NP_788480.1	316	CG6282, isoform B
3L	NT_037436.4	8617437	8619223	+	38986	S-Lap1	Dmel_CG6372	NP_648244.1	555	Sperm-Leucylaminopeptidase 1
3L	NT_037436.4	8620144	8621913	+	326209	S-Lap2	Dmel_CG32351	NP_729394.1	552	Sperm-Leucylaminopeptidase 2
3L	NT_037436.4	8622244	8623774	-	38987	GAPsec	Dmel_CG5978	NP_648245.2	403	GTPase activating protein, SECIS-dependent read-through
3L	NT_037436.4	8624483	8638353	+	38988	Zasp66	Dmel_CG6416	NP_001163385.1	406	Z band alternatively spliced PDZ-motif protein 66, isoform N
3L	NT_037436.4	8624483	8638273	+	38988	Zasp66	Dmel_CG6416	NP_001163386.1	326	Z band alternatively spliced PDZ-motif protein 66, isoform O
3L	NT_037436.4	8624483	8638353	+	38988	Zasp66	Dmel_CG6416	NP_729395.2	430	Z band alternatively spliced PDZ-motif protein 66, isoform E
3L	NT_037436.4	8626394	8638353	+	38988	Zasp66	Dmel_CG6416	NP_001163382.1	378	Z band alternatively spliced PDZ-motif protein 66, isoform K
3L	NT_037436.4	8626394	8638273	+	38988	Zasp66	Dmel_CG6416	NP_001163384.1	322	Z band alternatively spliced PDZ-motif protein 66, isoform M
3L	NT_037436.4	8626394	8638353	+	38988	Zasp66	Dmel_CG6416	NP_729396.2	402	Z band alternatively spliced PDZ-motif protein 66, isoform F
3L	NT_037436.4	8626394	8638273	+	38988	Zasp66	Dmel_CG6416	NP_648246.3	298	Z band alternatively spliced PDZ-motif protein 66, isoform B
3L	NT_037436.4	8630555	8638353	+	38988	Zasp66	Dmel_CG6416	NP_788481.1	215	Z band alternatively spliced PDZ-motif protein 66, isoform I
3L	NT_037436.4	8630555	8636604	+	38988	Zasp66	Dmel_CG6416	NP_788483.1	165	Z band alternatively spliced PDZ-motif protein 66, isoform G
3L	NT_037436.4	8630555	8638353	+	38988	Zasp66	Dmel_CG6416	NP_729398.1	239	Z band alternatively spliced PDZ-motif protein 66, isoform A
3L	NT_037436.4	8630555	8638273	+	38988	Zasp66	Dmel_CG6416	NP_788482.1	135	Z band alternatively spliced PDZ-motif protein 66, isoform H
3L	NT_037436.4	8630555	8638353	+	38988	Zasp66	Dmel_CG6416	NP_788484.2	239	Z band alternatively spliced PDZ-motif protein 66, isoform J
3L	NT_037436.4	8631883	8633949	-	38989	Cdc6	Dmel_CG5971	NP_648247.1	662	Cdc6
3L	NT_037436.4	8640554	8643408	+	38990	Cpr66D	Dmel_CG32029	NP_729400.1	270	cuticular protein 66D
3L	NT_037436.4	8645016	8646530	-	38992	CG13305	Dmel_CG13305	NP_001137913.1	323	uncharacterized protein Dmel_CG13305, isoform B
3L	NT_037436.4	8645233	8646530	-	38992	CG13305	Dmel_CG13305	NP_648250.1	203	uncharacterized protein Dmel_CG13305, isoform C
3L	NT_037436.4	8647491	8648825	-	38993	Arr2	Dmel_CG5962	NP_523976.1	401	arrestin 2
3L	NT_037436.4	8649547	8650716	+	38994	Pex7	Dmel_CG6486	NP_001137914.1	339	peroxin 7, isoform B
3L	NT_037436.4	8649547	8650716	+	38994	Pex7	Dmel_CG6486	NP_648251.1	339	peroxin 7, isoform A
3L	NT_037436.4	8676250	8678423	+	38995	h	Dmel_CG6494	NP_523977.2	337	hairy, isoform A
3L	NT_037436.4	8676250	8678423	+	38995	h	Dmel_CG6494	NP_001014577.1	337	hairy, isoform B
3L	NT_037436.4	8719267	8720143	-	47283	SrpRbeta	Dmel_CG33162	NP_001261596.1	244	signal recognition particle receptor beta, isoform B
3L	NT_037436.4	8719267	8720143	-	47283	SrpRbeta	Dmel_CG33162	NP_788485.1	244	signal recognition particle receptor beta, isoform A
3L	NT_037436.4	8720441	8721032	-	317826	CG32022	Dmel_CG32022	NP_001286987.1	178	uncharacterized protein Dmel_CG32022, isoform B
3L	NT_037436.4	8720441	8721032	-	317826	CG32022	Dmel_CG32022	NP_729403.1	178	uncharacterized protein Dmel_CG32022, isoform A
3L	NT_037436.4	8721589	8725511	+	38997	CG6511	Dmel_CG6511	NP_001261597.1	1211	CG6511, isoform B
3L	NT_037436.4	8721589	8725511	+	38997	CG6511	Dmel_CG6511	NP_648252.1	1211	CG6511, isoform A
3L	NT_037436.4	8725585	8725763	-	14462843	CG43965	Dmel_CG43965	NP_001261598.1	38	uncharacterized protein Dmel_CG43965
3L	NT_037436.4	8726835	8727527	+	38998	Cp18	Dmel_CG6517	NP_523978.1	172	chorion protein 18
3L	NT_037436.4	8728527	8728945	+	38999	Cp15	Dmel_CG6519	NP_523979.1	115	chorion protein 15
3L	NT_037436.4	8729908	8730518	+	39000	Cp19	Dmel_CG6524	NP_523980.1	173	chorion protein 19
3L	NT_037436.4	8731991	8732541	+	39001	Cp16	Dmel_CG6533	NP_523981.1	138	chorion protein 16
3L	NT_037436.4	8733654	8737850	-	39002	Prm	Dmel_CG5939	NP_729406.1	640	paramyosin, isoform C
3L	NT_037436.4	8733654	8745085	-	39002	Prm	Dmel_CG5939	NP_523982.2	879	paramyosin, isoform A
3L	NT_037436.4	8733654	8737850	-	39002	Prm	Dmel_CG5939	NP_729407.1	640	paramyosin, isoform D
3L	NT_037436.4	8733654	8745085	-	39002	Prm	Dmel_CG5939	NP_729405.1	879	paramyosin, isoform B
3L	NT_037436.4	8736927	8737850	-	39002	Prm	Dmel_CG5939	NP_001246681.1	307	paramyosin, isoform E
3L	NT_037436.4	8749275	8749559	-	50301	CG13306	Dmel_CG13306	NP_652444.1	94	uncharacterized protein Dmel_CG13306
3L	NT_037436.4	8754475	8798194	+	39004	Fhos	Dmel_CG42610	NP_001163387.2	2528	formin homology 2 domain containing, isoform J
3L	NT_037436.4	8754475	8798194	+	39004	Fhos	Dmel_CG42610	NP_001261599.1	2528	formin homology 2 domain containing, isoform I
3L	NT_037436.4	8756183	8756986	+	39003	CG6576	Dmel_CG6576	NP_648253.1	267	CG6576
3L	NT_037436.4	8761720	8798194	+	39004	Fhos	Dmel_CG42610	NP_001246684.1	1744	formin homology 2 domain containing, isoform H
3L	NT_037436.4	8777129	8798194	+	39004	Fhos	Dmel_CG42610	NP_729410.1	1393	formin homology 2 domain containing, isoform A
3L	NT_037436.4	8777129	8797745	+	39004	Fhos	Dmel_CG42610	NP_001189071.1	1387	formin homology 2 domain containing, isoform E
3L	NT_037436.4	8777129	8791304	+	39004	Fhos	Dmel_CG42610	NP_729411.1	1294	formin homology 2 domain containing, isoform B
3L	NT_037436.4	8777129	8798194	+	39004	Fhos	Dmel_CG42610	NP_001246683.1	1152	formin homology 2 domain containing, isoform G
3L	NT_037436.4	8777129	8797648	+	39004	Fhos	Dmel_CG42610	NP_001189072.1	1509	formin homology 2 domain containing, isoform D
3L	NT_037436.4	8785379	8797745	+	39004	Fhos	Dmel_CG42610	NP_001246682.1	1205	formin homology 2 domain containing, isoform F
3L	NT_037436.4	8788201	8788514	-	39005	CG5804	Dmel_CG5804	NP_648255.1	82	CG5804
3L	NT_037436.4	8798844	8800472	-	39007	CG13310	Dmel_CG13310	NP_648257.1	401	uncharacterized protein Dmel_CG13310
3L	NT_037436.4	8801610	8802128	-	39008	CG13311	Dmel_CG13311	NP_648258.1	153	uncharacterized protein Dmel_CG13311
3L	NT_037436.4	8802472	8803477	+	5740622	CG34426	Dmel_CG34426	NP_001097552.1	296	uncharacterized protein Dmel_CG34426
3L	NT_037436.4	8803640	8804178	-	317827	CG32023	Dmel_CG32023	NP_729415.2	160	uncharacterized protein Dmel_CG32023
3L	NT_037436.4	8804779	8805772	+	5740165	CG34427	Dmel_CG34427	NP_001097553.2	269	uncharacterized protein Dmel_CG34427
3L	NT_037436.4	8805828	8807198	-	39010	CG13312	Dmel_CG13312	NP_648260.1	342	uncharacterized protein Dmel_CG13312
3L	NT_037436.4	8807625	8808318	+	317828	CG32024	Dmel_CG32024	NP_729417.2	209	uncharacterized protein Dmel_CG32024
3L	NT_037436.4	8808544	8809307	+	39011	CG13308	Dmel_CG13308	NP_648261.2	233	uncharacterized protein Dmel_CG13308
3L	NT_037436.4	8810411	8811171	+	39012	CG13309	Dmel_CG13309	NP_648262.2	229	uncharacterized protein Dmel_CG13309
3L	NT_037436.4	8828233	8889318	+	39013	dally	Dmel_CG4974	NP_001246685.1	626	division abnormally delayed, isoform B
3L	NT_037436.4	8828233	8889318	+	39013	dally	Dmel_CG4974	NP_523983.1	626	division abnormally delayed, isoform A
3L	NT_037436.4	8836506	8838665	+	317829	CG32026	Dmel_CG32026	NP_729420.1	719	uncharacterized protein Dmel_CG32026
3L	NT_037436.4	8888246	8888531	-	12798372	CG43169	Dmel_CG43169	NP_001246686.1	70	uncharacterized protein Dmel_CG43169
3L	NT_037436.4	8891749	8894175	+	39014	Mcm7	Dmel_CG4978	NP_523984.1	720	minichromosome maintenance 7
3L	NT_037436.4	8894688	8903680	-	39015	TrpA1	Dmel_CG5751	NP_001261601.1	1231	transient receptor potential cation channel A1, isoform H
3L	NT_037436.4	8894688	8903680	-	39015	TrpA1	Dmel_CG5751	NP_001261602.1	1195	transient receptor potential cation channel A1, isoform K
3L	NT_037436.4	8894688	8901642	-	39015	TrpA1	Dmel_CG5751	NP_001097554.4	1196	transient receptor potential cation channel A1, isoform J
3L	NT_037436.4	8894688	8901642	-	39015	TrpA1	Dmel_CG5751	NP_648263.5	1197	transient receptor potential cation channel A1, isoform I
3L	NT_037436.4	8894688	8903680	-	39015	TrpA1	Dmel_CG5751	NP_001261600.1	1232	transient receptor potential cation channel A1, isoform G
3L	NT_037436.4	8906017	8911087	-	39016	mfr	Dmel_CG5747	NP_001137917.1	1351	misfire, isoform D
3L	NT_037436.4	8906017	8911238	-	39016	mfr	Dmel_CG5747	NP_001137920.1	1439	misfire, isoform I
3L	NT_037436.4	8906017	8908658	-	39016	mfr	Dmel_CG5747	NP_001137921.1	648	misfire, isoform J
3L	NT_037436.4	8906017	8912057	-	39016	mfr	Dmel_CG5747	NP_001137919.1	1647	misfire, isoform F
3L	NT_037436.4	8906088	8911238	-	39016	mfr	Dmel_CG5747	NP_001137916.1	1398	misfire, isoform C
3L	NT_037436.4	8906191	8910132	-	39016	mfr	Dmel_CG5747	NP_001137915.1	1045	misfire, isoform B
3L	NT_037436.4	8908895	8910919	-	39016	mfr	Dmel_CG5747	NP_001137918.1	639	misfire, isoform E
3L	NT_037436.4	8926127	8930949	+	39017	Tsp66E	Dmel_CG4999	NP_729423.1	267	tetraspanin 66E, isoform B
3L	NT_037436.4	8926127	8930949	+	39017	Tsp66E	Dmel_CG4999	NP_729424.1	267	tetraspanin 66E, isoform C
3L	NT_037436.4	8926127	8930949	+	39017	Tsp66E	Dmel_CG4999	NP_523985.1	267	tetraspanin 66E, isoform A
3L	NT_037436.4	8933063	8936253	-	14462845	CG43783	Dmel_CG43783	NP_001261607.1	914	uncharacterized protein Dmel_CG43783, isoform E
3L	NT_037436.4	8933063	8949681	-	14462845	CG43783	Dmel_CG43783	NP_001261606.1	1248	uncharacterized protein Dmel_CG43783, isoform G
3L	NT_037436.4	8933063	8949681	-	14462845	CG43783	Dmel_CG43783	NP_001261605.1	1221	uncharacterized protein Dmel_CG43783, isoform F
3L	NT_037436.4	8933063	8936253	-	14462845	CG43783	Dmel_CG43783	NP_001261604.1	913	uncharacterized protein Dmel_CG43783, isoform B
3L	NT_037436.4	8933063	8936253	-	14462845	CG43783	Dmel_CG43783	NP_001261603.1	887	uncharacterized protein Dmel_CG43783, isoform A
3L	NT_037436.4	8942891	8949681	-	39018	orb2	Dmel_CG43782	NP_001261608.1	704	orb2, isoform D
3L	NT_037436.4	8942891	8949681	-	39018	orb2	Dmel_CG43782	NP_729428.1	704	orb2, isoform B
3L	NT_037436.4	8942891	8944843	-	39018	orb2	Dmel_CG43782	NP_729429.1	551	orb2, isoform A
3L	NT_037436.4	8942891	8949681	-	39018	orb2	Dmel_CG43782	NP_729427.1	704	orb2, isoform C
3L	NT_037436.4	8942891	8949681	-	39018	orb2	Dmel_CG43782	NP_648266.1	704	orb2, isoform H
3L	NT_037436.4	8955026	8956498	+	39020	GNBP3	Dmel_CG5008	NP_523986.2	490	Gram-negative bacteria binding protein 3
3L	NT_037436.4	8956947	8957495	+	44326	mRpL12	Dmel_CG5012	NP_524742.1	182	mitochondrial ribosomal protein L12
3L	NT_037436.4	8958977	8960895	+	39022	CG13313	Dmel_CG13313	NP_648267.1	415	uncharacterized protein Dmel_CG13313
3L	NT_037436.4	8961400	8964626	-	39023	ValRS-m	Dmel_CG5660	NP_648268.1	994	Valyl-tRNA synthetase, mitochondrial, isoform A
3L	NT_037436.4	8961400	8964626	-	39023	ValRS-m	Dmel_CG5660	NP_001286988.1	994	Valyl-tRNA synthetase, mitochondrial, isoform B
3L	NT_037436.4	8964932	8966362	-	39024	CG5653	Dmel_CG5653	NP_648269.1	476	CG5653
3L	NT_037436.4	8966969	8967895	+	39025	CG5021	Dmel_CG5021	NP_729433.1	215	CG5021, isoform B
3L	NT_037436.4	8966969	8967895	+	39025	CG5021	Dmel_CG5021	NP_648270.2	218	CG5021, isoform A
3L	NT_037436.4	8966969	8967895	+	39025	CG5021	Dmel_CG5021	NP_001163390.1	223	CG5021, isoform C
3L	NT_037436.4	8966969	8967895	+	39025	CG5021	Dmel_CG5021	NP_001163391.1	220	CG5021, isoform D
3L	NT_037436.4	8968915	8971180	+	39026	CG5026	Dmel_CG5026	NP_729434.2	620	CG5026, isoform A
3L	NT_037436.4	8968915	8971180	+	39026	CG5026	Dmel_CG5026	NP_001163392.1	620	CG5026, isoform C
3L	NT_037436.4	8968915	8971180	+	39026	CG5026	Dmel_CG5026	NP_648271.3	620	CG5026, isoform B
3L	NT_037436.4	8972333	8974346	-	39027	pix	Dmel_CG5651	NP_648272.1	611	pixie, isoform A
3L	NT_037436.4	8972333	8974346	-	39027	pix	Dmel_CG5651	NP_729435.1	611	pixie, isoform B
3L	NT_037436.4	8975124	8977162	+	39028	Srp68	Dmel_CG5064	NP_648273.1	604	signal recognition particle protein 68
3L	NT_037436.4	8977474	8979627	-	39029	CG5644	Dmel_CG5644	NP_648274.1	459	CG5644
3L	NT_037436.4	8982723	8983103	+	39030	CG13314	Dmel_CG13314	NP_001189073.1	126	uncharacterized protein Dmel_CG13314, isoform B
3L	NT_037436.4	8982723	8983103	+	39030	CG13314	Dmel_CG13314	NP_648275.1	126	uncharacterized protein Dmel_CG13314, isoform A
3L	NT_037436.4	8983287	8985225	-	39031	Galk	Dmel_CG5288	NP_729439.1	490	galactokinase, isoform C
3L	NT_037436.4	8983287	8985225	-	39031	Galk	Dmel_CG5288	NP_729438.1	490	galactokinase, isoform A
3L	NT_037436.4	8983287	8985225	-	39031	Galk	Dmel_CG5288	NP_648276.1	490	galactokinase, isoform B
3L	NT_037436.4	8983287	8985225	-	39031	Galk	Dmel_CG5288	NP_001189074.1	490	galactokinase, isoform D
3L	NT_037436.4	8986885	8988695	+	39032	CG5068	Dmel_CG5068	NP_648277.3	409	CG5068, isoform A
3L	NT_037436.4	8986885	8988695	+	39032	CG5068	Dmel_CG5068	NP_001261609.1	409	CG5068, isoform B
3L	NT_037436.4	8989207	8990133	-	39033	CG5280	Dmel_CG5280	NP_648278.1	250	CG5280
3L	NT_037436.4	8991496	8995467	-	39034	smg	Dmel_CG5263	NP_729441.1	999	smaug, isoform B
3L	NT_037436.4	8991496	8995467	-	39034	smg	Dmel_CG5263	NP_523987.1	999	smaug, isoform A
3L	NT_037436.4	8991496	8995467	-	39034	smg	Dmel_CG5263	NP_001137925.1	999	smaug, isoform E
3L	NT_037436.4	8991496	8995467	-	39034	smg	Dmel_CG5263	NP_729442.1	999	smaug, isoform C
3L	NT_037436.4	8992081	8995467	-	39034	smg	Dmel_CG5263	NP_001137924.1	1109	smaug, isoform D
3L	NT_037436.4	8998455	9002129	+	39035	CG5087	Dmel_CG5087	NP_001261610.1	1077	CG5087, isoform B
3L	NT_037436.4	8998455	9002129	+	39035	CG5087	Dmel_CG5087	NP_648279.1	1078	CG5087, isoform A
3L	NT_037436.4	9005318	9006975	+	39036	Doc3	Dmel_CG5093	NP_648280.1	424	Dorsocross3
3L	NT_037436.4	9008751	9009761	-	39037	CG5194	Dmel_CG5194	NP_001261611.1	296	CG5194, isoform B
3L	NT_037436.4	9008751	9009761	-	39037	CG5194	Dmel_CG5194	NP_648281.1	302	CG5194, isoform A
3L	NT_037436.4	9012866	9018891	-	39038	Doc2	Dmel_CG5187	NP_648282.1	469	Dorsocross2
3L	NT_037436.4	9041540	9044857	+	39039	Doc1	Dmel_CG5133	NP_648283.1	391	Dorsocross1, isoform A
3L	NT_037436.4	9042047	9044857	+	39039	Doc1	Dmel_CG5133	NP_001261612.1	356	Dorsocross1, isoform B
3L	NT_037436.4	9047496	9048662	+	39040	CG5144	Dmel_CG5144	NP_648284.1	388	CG5144
3L	NT_037436.4	9049276	9050346	-	39041	Argk	Dmel_CG32031	NP_001286989.1	356	arginine kinase, isoform H
3L	NT_037436.4	9049276	9051236	-	39041	Argk	Dmel_CG32031	NP_729448.1	396	arginine kinase, isoform C
3L	NT_037436.4	9049276	9062121	-	39041	Argk	Dmel_CG32031	NP_729447.1	432	arginine kinase, isoform B
3L	NT_037436.4	9049276	9050346	-	39041	Argk	Dmel_CG32031	NP_001097556.2	356	arginine kinase, isoform G
3L	NT_037436.4	9049276	9064507	-	39041	Argk	Dmel_CG32031	NP_729446.1	562	arginine kinase, isoform A
3L	NT_037436.4	9049276	9050346	-	39041	Argk	Dmel_CG32031	NP_523988.2	356	arginine kinase, isoform D
3L	NT_037436.4	9049276	9064507	-	39041	Argk	Dmel_CG32031	NP_001097555.1	375	arginine kinase, isoform E
3L	NT_037436.4	9070516	9072630	-	39043	CG4911	Dmel_CG4911	NP_001261613.1	449	CG4911, isoform B
3L	NT_037436.4	9070516	9072630	-	39043	CG4911	Dmel_CG4911	NP_001286990.1	450	CG4911, isoform C
3L	NT_037436.4	9070516	9072630	-	39043	CG4911	Dmel_CG4911	NP_648285.1	450	CG4911, isoform A
3L	NT_037436.4	9073207	9074319	+	39044	CG4942	Dmel_CG4942	NP_648286.1	351	CG4942
3L	NT_037436.4	9074779	9092018	+	39048	teq	Dmel_CG4821	NP_001163393.2	2379	tequila, isoform F
3L	NT_037436.4	9074779	9077021	+	39048	teq	Dmel_CG4821	NP_729452.1	563	tequila, isoform C
3L	NT_037436.4	9074779	9092018	+	39048	teq	Dmel_CG4821	NP_729451.1	1450	tequila, isoform D
3L	NT_037436.4	9074779	9092018	+	39048	teq	Dmel_CG4821	NP_648288.2	2792	tequila, isoform G
3L	NT_037436.4	9093132	9094724	+	192535	CG32032	Dmel_CG32032	NP_729454.1	286	uncharacterized protein Dmel_CG32032
3L	NT_037436.4	9097011	9097220	+	50300	CG13315	Dmel_CG13315	NP_001286991.1	69	uncharacterized protein Dmel_CG13315, isoform B
3L	NT_037436.4	9097011	9097220	+	50300	CG13315	Dmel_CG13315	NP_652443.1	69	uncharacterized protein Dmel_CG13315, isoform A
3L	NT_037436.4	9102686	9113167	-	39049	bol	Dmel_CG4760	NP_001286992.1	228	boule, isoform G
3L	NT_037436.4	9102686	9113167	-	39049	bol	Dmel_CG4760	NP_729456.1	228	boule, isoform D
3L	NT_037436.4	9102686	9113167	-	39049	bol	Dmel_CG4760	NP_001261614.1	233	boule, isoform F
3L	NT_037436.4	9102686	9113167	-	39049	bol	Dmel_CG4760	NP_523989.1	228	boule, isoform B
3L	NT_037436.4	9107151	9113167	-	39049	bol	Dmel_CG4760	NP_729457.1	189	boule, isoform A
3L	NT_037436.4	9107151	9113167	-	39049	bol	Dmel_CG4760	NP_729458.1	189	boule, isoform C
3L	NT_037436.4	9112357	9113167	-	39049	bol	Dmel_CG4760	NP_001163394.1	95	boule, isoform E
3L	NT_037436.4	9134807	9135610	+	39050	Dhpr	Dmel_CG4665	NP_001014579.1	235	dihydropteridine reductase, isoform B
3L	NT_037436.4	9134807	9135610	+	39050	Dhpr	Dmel_CG4665	NP_523990.1	235	dihydropteridine reductase, isoform A
3L	NT_037436.4	9134807	9135610	+	39050	Dhpr	Dmel_CG4665	NP_001014580.1	235	dihydropteridine reductase, isoform C
3L	NT_037436.4	9135858	9137103	-	39051	Use1	Dmel_CG14181	NP_648289.2	250	unconventional SNARE in the ER 1
3L	NT_037436.4	9138677	9144330	+	39052	nwk	Dmel_CG43479	NP_001246691.1	1068	nervous wreck, isoform D
3L	NT_037436.4	9138677	9144450	+	39052	nwk	Dmel_CG43479	NP_001286997.1	1031	nervous wreck, isoform L
3L	NT_037436.4	9138677	9144330	+	39052	nwk	Dmel_CG43479	NP_648290.3	1068	nervous wreck, isoform G
3L	NT_037436.4	9138677	9144330	+	39052	nwk	Dmel_CG43479	NP_001286996.1	1049	nervous wreck, isoform K
3L	NT_037436.4	9138677	9144450	+	39052	nwk	Dmel_CG43479	NP_001286994.1	1075	nervous wreck, isoform I
3L	NT_037436.4	9138677	9142853	+	39052	nwk	Dmel_CG43479	NP_001246692.1	885	nervous wreck, isoform F
3L	NT_037436.4	9138677	9144450	+	39052	nwk	Dmel_CG43479	NP_001286993.1	1006	nervous wreck, isoform H
3L	NT_037436.4	9138677	9144330	+	39052	nwk	Dmel_CG43479	NP_001246689.1	1000	nervous wreck, isoform B
3L	NT_037436.4	9138677	9141932	+	39052	nwk	Dmel_CG43479	NP_001246690.1	821	nervous wreck, isoform C
3L	NT_037436.4	9138677	9144450	+	39052	nwk	Dmel_CG43479	NP_001286995.1	1056	nervous wreck, isoform J
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_729461.1	606	resistant to dieldrin, isoform C
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_001261615.1	606	resistant to dieldrin, isoform E
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_729462.2	579	resistant to dieldrin, isoform D
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_001261616.1	606	resistant to dieldrin, isoform F
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_001261617.1	608	resistant to dieldrin, isoform G
3L	NT_037436.4	9150951	9177233	-	39054	Rdl	Dmel_CG10537	NP_523991.2	606	resistant to dieldrin, isoform A
3L	NT_037436.4	9203316	9205500	-	39055	Slc45-1	Dmel_CG4484	NP_648292.1	599	solute carrier family 45 member 1, isoform A
3L	NT_037436.4	9203316	9205500	-	39055	Slc45-1	Dmel_CG4484	NP_001261618.1	599	solute carrier family 45 member 1, isoform B
3L	NT_037436.4	9203316	9205500	-	39055	Slc45-1	Dmel_CG4484	NP_001261620.1	599	solute carrier family 45 member 1, isoform D
3L	NT_037436.4	9203316	9205500	-	39055	Slc45-1	Dmel_CG4484	NP_001261619.1	599	solute carrier family 45 member 1, isoform C
3L	NT_037436.4	9212668	9215092	+	39056	CG4476	Dmel_CG4476	NP_648293.1	629	CG4476
3L	NT_037436.4	9235299	9236606	-	39057	CG4483	Dmel_CG4483	NP_648294.1	435	CG4483
3L	NT_037436.4	9250256	9251334	+	39058	CG4477	Dmel_CG4477	NP_648295.1	315	CG4477
3L	NT_037436.4	9256370	9285381	+	44484	GluRIB	Dmel_CG43743	NP_001261622.1	1095	glutamate receptor IB, isoform C
3L	NT_037436.4	9256370	9285381	+	44484	GluRIB	Dmel_CG43743	NP_524755.2	1095	glutamate receptor IB, isoform A
3L	NT_037436.4	9256370	9285411	+	44484	GluRIB	Dmel_CG43743	NP_001303409.1	1105	glutamate receptor IB, isoform D
3L	NT_037436.4	9256370	9285642	+	44484	GluRIB	Dmel_CG43743	NP_001261621.2	1182	glutamate receptor IB, isoform B
3L	NT_037436.4	9334630	9337869	+	39062	PGRP-LA	Dmel_CG32042	NP_996026.1	368	peptidoglycan recognition protein LA, isoform E
3L	NT_037436.4	9334630	9336999	+	39062	PGRP-LA	Dmel_CG32042	NP_996027.1	173	peptidoglycan recognition protein LA, isoform D
3L	NT_037436.4	9336293	9337869	+	39062	PGRP-LA	Dmel_CG32042	NP_996029.1	299	peptidoglycan recognition protein LA, isoform F
3L	NT_037436.4	9337156	9337869	+	39062	PGRP-LA	Dmel_CG32042	NP_001261623.1	138	peptidoglycan recognition protein LA, isoform G
3L	NT_037436.4	9337156	9337869	+	39062	PGRP-LA	Dmel_CG32042	NP_996028.1	138	peptidoglycan recognition protein LA, isoform C
3L	NT_037436.4	9342328	9348175	+	39063	PGRP-LC	Dmel_CG4432	NP_648298.1	520	peptidoglycan recognition protein LC, isoform B
3L	NT_037436.4	9342328	9346208	+	39063	PGRP-LC	Dmel_CG4432	NP_729468.2	500	peptidoglycan recognition protein LC, isoform A
3L	NT_037436.4	9342328	9347218	+	39063	PGRP-LC	Dmel_CG4432	NP_996030.1	511	peptidoglycan recognition protein LC, isoform C
3L	NT_037436.4	9342328	9348175	+	39063	PGRP-LC	Dmel_CG4432	NP_001246693.1	520	peptidoglycan recognition protein LC, isoform H
3L	NT_037436.4	9342328	9348175	+	39063	PGRP-LC	Dmel_CG4432	NP_001303367.1	501	peptidoglycan recognition protein LC, isoform I
3L	NT_037436.4	9342328	9346208	+	39063	PGRP-LC	Dmel_CG4432	NP_001163396.1	500	peptidoglycan recognition protein LC, isoform D
3L	NT_037436.4	9342328	9346626	+	39063	PGRP-LC	Dmel_CG4432	NP_001163398.1	345	peptidoglycan recognition protein LC, isoform G
3L	NT_037436.4	9344324	9346208	+	39063	PGRP-LC	Dmel_CG4432	NP_001163397.1	329	peptidoglycan recognition protein LC, isoform E
3L	NT_037436.4	9349686	9351321	+	39064	PGRP-LF	Dmel_CG4437	NP_648299.3	369	peptidoglycan recognition protein LF
3L	NT_037436.4	9351743	9358641	-	39065	UGP	Dmel_CG4347	NP_001163399.1	511	UGP, isoform D
3L	NT_037436.4	9351743	9357630	-	39065	UGP	Dmel_CG4347	NP_648300.3	520	UGP, isoform A
3L	NT_037436.4	9351743	9357630	-	39065	UGP	Dmel_CG4347	NP_001163400.1	518	UGP, isoform E
3L	NT_037436.4	9351743	9358641	-	39065	UGP	Dmel_CG4347	NP_729469.2	513	UGP, isoform C
3L	NT_037436.4	9354336	9355338	+	317835	CG32040	Dmel_CG32040	NP_729470.1	313	uncharacterized protein Dmel_CG32040
3L	NT_037436.4	9359125	9359490	+	317834	CG32039	Dmel_CG32039	NP_729471.1	82	uncharacterized protein Dmel_CG32039, isoform A
3L	NT_037436.4	9359125	9359490	+	317834	CG32039	Dmel_CG32039	NP_001286998.1	82	uncharacterized protein Dmel_CG32039, isoform B
3L	NT_037436.4	9360670	9361721	+	39066	Pdxk	Dmel_CG34455	NP_996031.1	304	pyridoxal kinase
3L	NT_037436.4	9362166	9362669	+	5740168	CG34456	Dmel_CG34456	NP_001097559.1	167	uncharacterized protein Dmel_CG34456
3L	NT_037436.4	9362928	9366789	-	39068	Klp67A	Dmel_CG10923	NP_001286999.1	814	Kinesin-like protein at 67A, isoform C
3L	NT_037436.4	9362928	9366789	-	39068	Klp67A	Dmel_CG10923	NP_523992.2	814	Kinesin-like protein at 67A, isoform A
3L	NT_037436.4	9363302	9366789	-	39068	Klp67A	Dmel_CG10923	NP_001261624.1	740	Kinesin-like protein at 67A, isoform B
3L	NT_037436.4	9364417	9365181	+	39067	CG4447	Dmel_CG4447	NP_648302.2	254	CG4447
3L	NT_037436.4	9367525	9369105	+	39069	CG4452	Dmel_CG4452	NP_001261625.1	156	CG4452, isoform E
3L	NT_037436.4	9367525	9369944	+	39069	CG4452	Dmel_CG4452	NP_648303.1	390	CG4452, isoform A
3L	NT_037436.4	9370351	9371018	-	39070	Fdx1	Dmel_CG4205	NP_001189075.1	172	ferredoxin 1, isoform B
3L	NT_037436.4	9370351	9371018	-	39070	Fdx1	Dmel_CG4205	NP_523993.1	172	ferredoxin 1, isoform A
3L	NT_037436.4	9371718	9372317	-	39071	Hsp67Bc	Dmel_CG4190	NP_523994.1	199	heat shock gene 67Bc
3L	NT_037436.4	9372975	9373444	+	3772576	Hsp22	Dmel_CG4460	NP_001189077.1	111	CG4456, isoform D
3L	NT_037436.4	9372975	9373444	+	3772576	Hsp22	Dmel_CG4460	NP_001189076.1	111	CG4456, isoform C
3L	NT_037436.4	9372975	9373444	+	3772576	Hsp22	Dmel_CG4460	NP_001027117.1	111	CG4456, isoform A
3L	NT_037436.4	9372975	9373444	+	3772576	Hsp22	Dmel_CG4460	NP_001027116.1	111	CG4456, isoform B
3L	NT_037436.4	9374251	9374775	+	3772576	Hsp22	Dmel_CG4460	NP_001027114.1	174	heat shock protein 22, isoform B
3L	NT_037436.4	9374251	9374775	+	3772576	Hsp22	Dmel_CG4460	NP_001027115.1	174	heat shock protein 22, isoform A
3L	NT_037436.4	9375484	9376086	+	39074	CG4461	Dmel_CG4461	NP_648304.1	200	CG4461
3L	NT_037436.4	9376562	9377188	-	39075	Hsp26	Dmel_CG4183	NP_523997.1	208	heat shock protein 26, isoform A
3L	NT_037436.4	9376562	9377188	-	39075	Hsp26	Dmel_CG4183	NP_001287000.1	208	heat shock protein 26, isoform B
3L	NT_037436.4	9378102	9379439	-	39076	Hsp67Ba	Dmel_CG4167	NP_523998.1	445	heat shock gene 67Ba
3L	NT_037436.4	9381998	9382558	+	39077	Hsp23	Dmel_CG4463	NP_001246694.1	186	heat shock protein 23, isoform B
3L	NT_037436.4	9381998	9382558	+	39077	Hsp23	Dmel_CG4463	NP_523999.1	186	heat shock protein 23, isoform A
3L	NT_037436.4	9384186	9384827	+	39078	Hsp27	Dmel_CG4466	NP_524000.1	213	heat shock protein 27, isoform A
3L	NT_037436.4	9384186	9384827	+	39078	Hsp27	Dmel_CG4466	NP_001287001.1	213	heat shock protein 27, isoform B
3L	NT_037436.4	9387785	9398586	-	39079	CG4080	Dmel_CG4080	NP_001246695.1	617	CG4080, isoform B
3L	NT_037436.4	9387785	9398586	-	39079	CG4080	Dmel_CG4080	NP_648305.1	617	CG4080, isoform A
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_729484.1	259	eukaryotic initiation factor 4E, isoform F
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_524829.1	259	eukaryotic initiation factor 4E, isoform B
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_001261626.1	259	eukaryotic initiation factor 4E, isoform H
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_729482.1	259	eukaryotic initiation factor 4E, isoform D
3L	NT_037436.4	9399870	9402303	-	45525	eIF-4E	Dmel_CG4035	NP_729480.1	248	eukaryotic initiation factor 4E, isoform C
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_729483.1	259	eukaryotic initiation factor 4E, isoform E
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_729481.1	259	eukaryotic initiation factor 4E, isoform A
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_729485.1	259	eukaryotic initiation factor 4E, isoform G
3L	NT_037436.4	9399870	9401096	-	45525	eIF-4E	Dmel_CG4035	NP_001261627.1	259	eukaryotic initiation factor 4E, isoform I
3L	NT_037436.4	9404889	9406039	+	39081	Cpr67B	Dmel_CG3672	NP_648306.1	260	cuticular protein 67B
3L	NT_037436.4	9408213	9409966	-	39082	CG4022	Dmel_CG4022	NP_001246697.1	531	CG4022, isoform C
3L	NT_037436.4	9408213	9409966	-	39082	CG4022	Dmel_CG4022	NP_648307.1	531	CG4022, isoform A
3L	NT_037436.4	9408213	9409966	-	39082	CG4022	Dmel_CG4022	NP_001246696.1	531	CG4022, isoform B
3L	NT_037436.4	9411276	9412189	+	39083	CG3689	Dmel_CG3689	NP_648308.1	203	CG3689, isoform B
3L	NT_037436.4	9411276	9413412	+	39083	CG3689	Dmel_CG3689	NP_001036597.1	237	CG3689, isoform C
3L	NT_037436.4	9414246	9419201	-	39086	CG3967	Dmel_CG3967	NP_648309.1	461	CG3967, isoform A
3L	NT_037436.4	9414246	9419201	-	39086	CG3967	Dmel_CG3967	NP_648310.1	461	CG3967, isoform C
3L	NT_037436.4	9414246	9419201	-	39086	CG3967	Dmel_CG3967	NP_729488.1	461	CG3967, isoform E
3L	NT_037436.4	9414246	9419201	-	39086	CG3967	Dmel_CG3967	NP_729487.1	461	CG3967, isoform D
3L	NT_037436.4	9415287	9419201	-	39086	CG3967	Dmel_CG3967	NP_001261628.1	291	CG3967, isoform F
3L	NT_037436.4	9415287	9419201	-	39086	CG3967	Dmel_CG3967	NP_729489.1	291	CG3967, isoform B
3L	NT_037436.4	9415957	9417185	-	39084	CG3982	Dmel_CG3982	NP_729490.1	349	CG3982
3L	NT_037436.4	9423550	9424362	+	39085	aay	Dmel_CG3705	NP_524001.2	270	astray
3L	NT_037436.4	9427143	9428434	+	44052	Shc	Dmel_CG3715	NP_524683.2	409	SHC-adaptor protein
3L	NT_037436.4	9428874	9429697	-	39088	RpS17	Dmel_CG3922	NP_524002.1	131	ribosomal protein S17
3L	NT_037436.4	9430522	9437922	+	39089	MTF-1	Dmel_CG3743	NP_001097560.1	1006	metal response element-binding transcription Factor-1, isoform C
3L	NT_037436.4	9430522	9437922	+	39089	MTF-1	Dmel_CG3743	NP_648311.2	791	metal response element-binding transcription Factor-1, isoform A
3L	NT_037436.4	9430522	9438987	+	39089	MTF-1	Dmel_CG3743	NP_001287002.1	822	metal response element-binding transcription Factor-1, isoform F
3L	NT_037436.4	9434546	9435399	-	8674075	CG42526	Dmel_CG42526	NP_001163401.1	245	uncharacterized protein Dmel_CG42526
3L	NT_037436.4	9436210	9437922	+	39089	MTF-1	Dmel_CG3743	NP_001287003.1	570	metal response element-binding transcription Factor-1, isoform G
3L	NT_037436.4	9436210	9437922	+	39089	MTF-1	Dmel_CG3743	NP_001097562.1	570	metal response element-binding transcription Factor-1, isoform E
3L	NT_037436.4	9436210	9437922	+	39089	MTF-1	Dmel_CG3743	NP_001097561.1	570	metal response element-binding transcription Factor-1, isoform D
3L	NT_037436.4	9436210	9437922	+	39089	MTF-1	Dmel_CG3743	NP_729491.1	570	metal response element-binding transcription Factor-1, isoform B
3L	NT_037436.4	9438965	9442162	-	39090	Bet3	Dmel_CG3911	NP_648312.3	178	blocked early in transport 3
3L	NT_037436.4	9440693	9441892	-	39091	Nf-YA	Dmel_CG3891	NP_648313.1	399	nuclear factor Y-box A
3L	NT_037436.4	9443331	9446285	+	39092	CG33926	Dmel_CG33926	NP_001287004.1	205	uncharacterized protein Dmel_CG33926, isoform B
3L	NT_037436.4	9443331	9446285	+	39092	CG33926	Dmel_CG33926	NP_001027118.1	205	uncharacterized protein Dmel_CG33926, isoform A
3L	NT_037436.4	9446996	9450429	+	39093	CG3529	Dmel_CG3529	NP_648315.1	543	CG3529, isoform B
3L	NT_037436.4	9446996	9450429	+	39093	CG3529	Dmel_CG3529	NP_001261630.1	540	CG3529, isoform D
3L	NT_037436.4	9446996	9450429	+	39093	CG3529	Dmel_CG3529	NP_001261629.1	526	CG3529, isoform C
3L	NT_037436.4	9450824	9451531	-	39094	CG3448	Dmel_CG3448	NP_648316.1	235	CG3448
3L	NT_037436.4	9451980	9452443	+	317833	ghi	Dmel_CG32038	NP_729495.1	81	ghiberti
3L	NT_037436.4	9453530	9455539	-	39095	phol	Dmel_CG3445	NP_001287005.1	669	pleiohomeotic like, isoform B
3L	NT_037436.4	9453530	9455539	-	39095	phol	Dmel_CG3445	NP_648317.1	669	pleiohomeotic like, isoform A
3L	NT_037436.4	9456398	9457649	-	39096	CG3437	Dmel_CG3437	NP_648318.2	349	CG3437
3L	NT_037436.4	9457989	9459334	+	39097	CG3552	Dmel_CG3552	NP_001137926.1	408	CG3552, isoform D
3L	NT_037436.4	9457989	9459334	+	39097	CG3552	Dmel_CG3552	NP_648319.1	408	CG3552, isoform A
3L	NT_037436.4	9459402	9460717	-	39098	CG3434	Dmel_CG3434	NP_648320.1	418	CG3434
3L	NT_037436.4	9463444	9471979	+	39099	CG44838	Dmel_CG44838	NP_001137927.1	783	uncharacterized protein Dmel_CG44838, isoform H
3L	NT_037436.4	9463444	9474504	+	39099	CG44838	Dmel_CG44838	NP_001287006.1	828	uncharacterized protein Dmel_CG44838, isoform I
3L	NT_037436.4	9463444	9471979	+	39099	CG44838	Dmel_CG44838	NP_648321.2	783	uncharacterized protein Dmel_CG44838, isoform G
3L	NT_037436.4	9463444	9474504	+	39099	CG44838	Dmel_CG44838	NP_001287007.1	828	uncharacterized protein Dmel_CG44838, isoform E
3L	NT_037436.4	9463444	9471979	+	39099	CG44838	Dmel_CG44838	NP_001137928.2	783	uncharacterized protein Dmel_CG44838, isoform F
3L	NT_037436.4	9463444	9471979	+	39099	CG44838	Dmel_CG44838	NP_729500.1	783	uncharacterized protein Dmel_CG44838, isoform D
3L	NT_037436.4	9475794	9476847	-	39102	Uch-L5	Dmel_CG3431	NP_001261632.1	324	ubiquitin carboxy-terminal hydrolase L5, isoform B
3L	NT_037436.4	9475794	9476847	-	39102	Uch-L5	Dmel_CG3431	NP_524003.1	324	ubiquitin carboxy-terminal hydrolase L5, isoform A
3L	NT_037436.4	9477507	9485592	+	39103	Jarid2	Dmel_CG3654	NP_648324.1	2351	Jumonji, AT rich interactive domain 2
3L	NT_037436.4	9486623	9487704	-	39104	pall	Dmel_CG3428	NP_648325.2	314	pallbearer
3L	NT_037436.4	9488138	9489134	-	39105	CG32036	Dmel_CG32036	NP_729504.2	173	uncharacterized protein Dmel_CG32036
3L	NT_037436.4	9490163	9491799	-	326183	CG32037	Dmel_CG32037	NP_648326.1	252	uncharacterized protein Dmel_CG32037, isoform A
3L	NT_037436.4	9490163	9491799	-	326183	CG32037	Dmel_CG32037	NP_001261633.1	252	uncharacterized protein Dmel_CG32037, isoform B
3L	NT_037436.4	9495678	9499178	-	39106	path	Dmel_CG3424	NP_001261634.1	471	pathetic, isoform D
3L	NT_037436.4	9495678	9499178	-	39106	path	Dmel_CG3424	NP_648327.1	471	pathetic, isoform A
3L	NT_037436.4	9495678	9497334	-	39106	path	Dmel_CG3424	NP_729505.2	458	pathetic, isoform E
3L	NT_037436.4	9507579	9509452	-	39107	CG3408	Dmel_CG3408	NP_001261635.1	327	CG3408, isoform B
3L	NT_037436.4	9507579	9509452	-	39107	CG3408	Dmel_CG3408	NP_648328.1	331	CG3408, isoform A
3L	NT_037436.4	9509981	9511278	-	39108	RpS9	Dmel_CG3395	NP_524004.2	195	ribosomal protein S9, isoform A
3L	NT_037436.4	9509981	9511278	-	39108	RpS9	Dmel_CG3395	NP_729506.1	195	ribosomal protein S9, isoform D
3L	NT_037436.4	9509981	9511278	-	39108	RpS9	Dmel_CG3395	NP_001287008.1	195	ribosomal protein S9, isoform E
3L	NT_037436.4	9510461	9511278	-	39108	RpS9	Dmel_CG3395	NP_729507.1	137	ribosomal protein S9, isoform B
3L	NT_037436.4	9512008	9512660	-	3771760	CG33703	Dmel_CG33703	NP_001027119.1	181	uncharacterized protein Dmel_CG33703
3L	NT_037436.4	9512797	9513409	-	3771932	CG33702	Dmel_CG33702	NP_001027120.1	179	uncharacterized protein Dmel_CG33702
3L	NT_037436.4	9514239	9514831	-	3772390	CG33700	Dmel_CG33700	NP_001027121.3	175	uncharacterized protein Dmel_CG33700
3L	NT_037436.4	9529921	9531334	+	39109	Or67a	Dmel_CG12526	NP_524005.2	407	odorant receptor 67a
3L	NT_037436.4	9542245	9543999	-	39110	Ir67a	Dmel_CG12525	NP_648329.3	584	ionotropic receptor 67a
3L	NT_037436.4	9553435	9593779	+	39111	CG42673	Dmel_CG42673	NP_729509.1	698	uncharacterized protein Dmel_CG42673, isoform B
3L	NT_037436.4	9553435	9595239	+	39111	CG42673	Dmel_CG42673	NP_001189078.1	438	uncharacterized protein Dmel_CG42673, isoform D
3L	NT_037436.4	9586991	9593779	+	39111	CG42673	Dmel_CG42673	NP_729510.1	904	uncharacterized protein Dmel_CG42673, isoform C
3L	NT_037436.4	9597854	9613804	+	26067066	Tmc	Dmel_CG46121	NP_001303362.1	2036	transmembrane channel-like, isoform C
3L	NT_037436.4	9599073	9600212	+	39114	CG3222	Dmel_CG3222	NP_648333.1	379	CG3222
3L	NT_037436.4	9600547	9601305	-	39115	CG3088	Dmel_CG3088	NP_648334.1	252	CG3088
3L	NT_037436.4	9601596	9602462	+	39116	CG3306	Dmel_CG3306	NP_648335.1	288	CG3306
3L	NT_037436.4	9603923	9613804	+	26067066	Tmc	Dmel_CG46121	NP_001246698.1	1932	transmembrane channel-like, isoform D
3L	NT_037436.4	9617247	9623390	+	39118	LanB2	Dmel_CG3322	NP_001287009.1	1639	laminin B2, isoform B
3L	NT_037436.4	9617247	9623390	+	39118	LanB2	Dmel_CG3322	NP_524006.1	1639	laminin B2, isoform A
3L	NT_037436.4	9624337	9627252	+	39119	CG3335	Dmel_CG3335	NP_648337.1	918	CG3335
3L	NT_037436.4	9627412	9629193	-	39120	Or67b	Dmel_CG14176	NP_524007.2	421	odorant receptor 67b
3L	NT_037436.4	9630221	9631696	+	39121	CG8336	Dmel_CG8336	NP_729517.1	383	CG8336, isoform B
3L	NT_037436.4	9630221	9631696	+	39121	CG8336	Dmel_CG8336	NP_729518.1	383	CG8336, isoform C
3L	NT_037436.4	9630221	9631696	+	39121	CG8336	Dmel_CG8336	NP_001261636.1	383	CG8336, isoform D
3L	NT_037436.4	9630221	9631696	+	39121	CG8336	Dmel_CG8336	NP_648338.1	383	CG8336, isoform A
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_001261639.1	3495	furry, isoform J
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_001261638.1	3538	furry, isoform I
3L	NT_037436.4	9631989	9674840	-	39122	fry	Dmel_CG32045	NP_001261637.1	3474	furry, isoform H
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_729519.2	3527	furry, isoform C
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_001246700.1	3490	furry, isoform F
3L	NT_037436.4	9631989	9674840	-	39122	fry	Dmel_CG32045	NP_001246699.1	3533	furry, isoform E
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_729520.1	3479	furry, isoform B
3L	NT_037436.4	9631989	9678826	-	39122	fry	Dmel_CG32045	NP_001246701.1	3544	furry, isoform G
3L	NT_037436.4	9638127	9638906	+	39123	CG8329	Dmel_CG8329	NP_648339.1	259	CG8329
3L	NT_037436.4	9639289	9640095	+	39124	CG18179	Dmel_CG18179	NP_648340.1	268	uncharacterized protein Dmel_CG18179
3L	NT_037436.4	9641032	9641826	+	39125	CG18180	Dmel_CG18180	NP_648341.1	264	uncharacterized protein Dmel_CG18180
3L	NT_037436.4	9644836	9658899	+	39127	CNMaR	Dmel_CG33696	NP_001027122.2	480	CNMamide receptor
3L	NT_037436.4	9679908	9680810	+	39129	CG16717	Dmel_CG16717	NP_648343.1	300	uncharacterized protein Dmel_CG16717
3L	NT_037436.4	9681414	9683288	+	39130	alphaTub67C	Dmel_CG8308	NP_524009.2	462	alpha-Tubulin at 67C
3L	NT_037436.4	9684366	9695232	-	39132	CG6767	Dmel_CG6767	NP_001261643.1	369	CG6767, isoform F
3L	NT_037436.4	9684366	9695232	-	39132	CG6767	Dmel_CG6767	NP_729528.2	388	CG6767, isoform B
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_001287012.1	354	CG6767, isoform J
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_001261644.1	373	CG6767, isoform G
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_001287011.1	373	CG6767, isoform I
3L	NT_037436.4	9684366	9695232	-	39132	CG6767	Dmel_CG6767	NP_001261641.1	373	CG6767, isoform D
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_001261640.1	354	CG6767, isoform C
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_001287010.1	350	CG6767, isoform H
3L	NT_037436.4	9684366	9694450	-	39132	CG6767	Dmel_CG6767	NP_648345.1	350	CG6767, isoform A
3L	NT_037436.4	9685255	9686070	+	39131	CG16719	Dmel_CG16719	NP_648344.1	271	uncharacterized protein Dmel_CG16719
3L	NT_037436.4	9698693	9699729	+	39133	Ubc4	Dmel_CG8284	NP_001287013.1	199	ubiquitin conjugating enzyme 4, isoform B
3L	NT_037436.4	9698693	9699729	+	39133	Ubc4	Dmel_CG8284	NP_524010.2	199	ubiquitin conjugating enzyme 4, isoform A
3L	NT_037436.4	9698693	9699729	+	39133	Ubc4	Dmel_CG8284	NP_001287014.1	199	ubiquitin conjugating enzyme 4, isoform C
3L	NT_037436.4	9700701	9703430	-	39134	CG6761	Dmel_CG6761	NP_001261645.1	834	CG6761, isoform B
3L	NT_037436.4	9700701	9703595	-	39134	CG6761	Dmel_CG6761	NP_648346.1	889	CG6761, isoform A
3L	NT_037436.4	9704771	9709333	+	39135	CG16711	Dmel_CG16711	NP_648347.2	1497	uncharacterized protein Dmel_CG16711, isoform C
3L	NT_037436.4	9704771	9708601	+	39135	CG16711	Dmel_CG16711	NP_729532.1	1253	uncharacterized protein Dmel_CG16711, isoform B
3L	NT_037436.4	9710728	9713685	-	39136	SH3PX1	Dmel_CG6757	NP_648348.1	565	SH3 and PX domain containing 1
3L	NT_037436.4	9714551	9716222	+	39137	vsg	Dmel_CG16707	NP_729536.1	182	visgun, isoform B
3L	NT_037436.4	9714551	9716462	+	39137	vsg	Dmel_CG16707	NP_001261646.1	262	visgun, isoform E
3L	NT_037436.4	9714551	9716222	+	39137	vsg	Dmel_CG16707	NP_729535.1	182	visgun, isoform A
3L	NT_037436.4	9714551	9716222	+	39137	vsg	Dmel_CG16707	NP_648349.1	183	visgun, isoform C
3L	NT_037436.4	9714551	9716222	+	39137	vsg	Dmel_CG16707	NP_729534.1	183	visgun, isoform D
3L	NT_037436.4	9717859	9718983	-	39138	CG18178	Dmel_CG18178	NP_001261647.1	374	uncharacterized protein Dmel_CG18178, isoform B
3L	NT_037436.4	9717859	9718983	-	39138	CG18178	Dmel_CG18178	NP_648350.1	374	uncharacterized protein Dmel_CG18178, isoform A
3L	NT_037436.4	9719340	9720447	+	39139	CG14174	Dmel_CG14174	NP_648351.1	347	uncharacterized protein Dmel_CG14174
3L	NT_037436.4	9720485	9723123	-	44259	nbs	Dmel_CG6754	NP_651973.4	818	nbs, isoform E
3L	NT_037436.4	9720485	9723123	-	44259	nbs	Dmel_CG6754	NP_001246702.1	816	nbs, isoform D
3L	NT_037436.4	9723542	9726604	+	39141	defl	Dmel_CG18176	NP_648352.2	1001	deflated
3L	NT_037436.4	9727553	9728845	+	39142	Naa60	Dmel_CG18177	NP_996032.1	276	N(alpha)-acetyltransferase 60, isoform A
3L	NT_037436.4	9727553	9728699	+	39142	Naa60	Dmel_CG18177	NP_001137929.1	239	N(alpha)-acetyltransferase 60, isoform C
3L	NT_037436.4	9727553	9728845	+	39142	Naa60	Dmel_CG18177	NP_648353.3	255	N(alpha)-acetyltransferase 60, isoform B
3L	NT_037436.4	9730068	9731107	+	39143	ATPsynB	Dmel_CG8189	NP_524011.1	243	ATP synthase, subunit B
3L	NT_037436.4	9731408	9733802	-	39144	CG6749	Dmel_CG6749	NP_648354.1	552	CG6749
3L	NT_037436.4	9734746	9751122	-	39145	CG42268	Dmel_CG42268	NP_001261651.1	1398	uncharacterized protein Dmel_CG42268, isoform L
3L	NT_037436.4	9734746	9738985	-	39145	CG42268	Dmel_CG42268	NP_001261650.1	331	uncharacterized protein Dmel_CG42268, isoform K
3L	NT_037436.4	9734746	9738985	-	39145	CG42268	Dmel_CG42268	NP_001261649.1	331	uncharacterized protein Dmel_CG42268, isoform J
3L	NT_037436.4	9734746	9751122	-	39145	CG42268	Dmel_CG42268	NP_729543.1	1392	uncharacterized protein Dmel_CG42268, isoform F
3L	NT_037436.4	9734746	9753376	-	39145	CG42268	Dmel_CG42268	NP_001261648.1	1493	uncharacterized protein Dmel_CG42268, isoform I
3L	NT_037436.4	9734746	9753376	-	39145	CG42268	Dmel_CG42268	NP_729544.2	1477	uncharacterized protein Dmel_CG42268, isoform D
3L	NT_037436.4	9735284	9751122	-	39145	CG42268	Dmel_CG42268	NP_001261652.1	1200	uncharacterized protein Dmel_CG42268, isoform M
3L	NT_037436.4	9735284	9751122	-	39145	CG42268	Dmel_CG42268	NP_729542.4	1218	uncharacterized protein Dmel_CG42268, isoform H
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_648357.1	1268	CG8177, isoform A
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_001261653.1	1210	CG8177, isoform M
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_996033.1	1233	CG8177, isoform K
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_729549.1	1201	CG8177, isoform F
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_996036.1	1201	CG8177, isoform H
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_729546.1	1268	CG8177, isoform G
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_729547.1	1201	CG8177, isoform B
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_996035.1	1201	CG8177, isoform I
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_729548.1	1201	CG8177, isoform C
3L	NT_037436.4	9771842	9785316	+	39147	CG8177	Dmel_CG8177	NP_996034.1	1166	CG8177, isoform J
3L	NT_037436.4	9779488	9785316	+	39147	CG8177	Dmel_CG8177	NP_729550.1	1228	CG8177, isoform E
3L	NT_037436.4	9779488	9781296	+	39147	CG8177	Dmel_CG8177	NP_001163402.1	371	CG8177, isoform L
3L	NT_037436.4	9779488	9785316	+	39147	CG8177	Dmel_CG8177	NP_729551.1	1161	CG8177, isoform D
3L	NT_037436.4	9788576	9797526	-	39148	Zasp67	Dmel_CG14168	NP_648358.2	730	Z band alternatively spliced PDZ-motif protein 67, isoform G
3L	NT_037436.4	9788576	9797526	-	39148	Zasp67	Dmel_CG14168	NP_001261655.1	725	Z band alternatively spliced PDZ-motif protein 67, isoform E
3L	NT_037436.4	9788576	9797526	-	39148	Zasp67	Dmel_CG14168	NP_001287015.1	682	Z band alternatively spliced PDZ-motif protein 67, isoform H
3L	NT_037436.4	9790970	9797526	-	39148	Zasp67	Dmel_CG14168	NP_001261654.1	604	Z band alternatively spliced PDZ-motif protein 67, isoform D
3L	NT_037436.4	9798434	9798898	+	39149	Ilp1	Dmel_CG14173	NP_648359.1	154	Insulin-like peptide 1
3L	NT_037436.4	9799171	9807990	+	326184	CG32052	Dmel_CG32052	NP_001303411.1	509	uncharacterized protein Dmel_CG32052, isoform E
3L	NT_037436.4	9799171	9807990	+	326184	CG32052	Dmel_CG32052	NP_001303410.1	509	uncharacterized protein Dmel_CG32052, isoform D
3L	NT_037436.4	9799171	9807990	+	326184	CG32052	Dmel_CG32052	NP_729555.4	509	uncharacterized protein Dmel_CG32052, isoform C
3L	NT_037436.4	9799764	9800250	+	39150	Ilp2	Dmel_CG8167	NP_524012.1	137	Insulin-like peptide 2
3L	NT_037436.4	9801615	9802049	-	39151	Ilp3	Dmel_CG14167	NP_648360.2	120	Insulin-like peptide 3
3L	NT_037436.4	9803648	9804113	-	39152	Ilp4	Dmel_CG6736	NP_648361.1	134	Insulin-like peptide 4
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_788488.2	354	uncharacterized protein Dmel_CG43897, isoform F
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261657.1	502	uncharacterized protein Dmel_CG43897, isoform K
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261656.1	501	uncharacterized protein Dmel_CG43897, isoform J
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_788486.2	501	uncharacterized protein Dmel_CG43897, isoform B
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_001033997.1	355	uncharacterized protein Dmel_CG43897, isoform H
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261659.1	1385	uncharacterized protein Dmel_CG43897, isoform M
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_788487.2	501	uncharacterized protein Dmel_CG43897, isoform C
3L	NT_037436.4	9820441	9831926	+	39153	CG43897	Dmel_CG43897	NP_001261661.1	123	uncharacterized protein Dmel_CG43897, isoform P
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_788489.2	354	uncharacterized protein Dmel_CG43897, isoform G
3L	NT_037436.4	9820441	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261658.1	500	uncharacterized protein Dmel_CG43897, isoform L
3L	NT_037436.4	9821907	9833017	+	39153	CG43897	Dmel_CG43897	NP_788491.2	315	uncharacterized protein Dmel_CG43897, isoform E
3L	NT_037436.4	9821907	9833017	+	39153	CG43897	Dmel_CG43897	NP_729559.2	1339	uncharacterized protein Dmel_CG43897, isoform N
3L	NT_037436.4	9821907	9833017	+	39153	CG43897	Dmel_CG43897	NP_788490.2	462	uncharacterized protein Dmel_CG43897, isoform A
3L	NT_037436.4	9823476	9823870	-	2768992	Ilp5	Dmel_CG33273	NP_996037.1	107	Insulin-like peptide 5
3L	NT_037436.4	9830021	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261663.1	446	uncharacterized protein Dmel_CG43897, isoform R
3L	NT_037436.4	9830021	9833017	+	39153	CG43897	Dmel_CG43897	NP_001033998.1	206	uncharacterized protein Dmel_CG43897, isoform I
3L	NT_037436.4	9830021	9833017	+	39153	CG43897	Dmel_CG43897	NP_001261662.1	299	uncharacterized protein Dmel_CG43897, isoform Q
3L	NT_037436.4	9830021	9831926	+	39153	CG43897	Dmel_CG43897	NP_001261660.1	215	uncharacterized protein Dmel_CG43897, isoform O
3L	NT_037436.4	9835008	9836505	-	39156	I-2	Dmel_CG10574	NP_001097564.1	310	Inhibitor-2, isoform B
3L	NT_037436.4	9835008	9836128	-	39156	I-2	Dmel_CG10574	NP_524013.1	205	Inhibitor-2, isoform A
3L	NT_037436.4	9837179	9838605	-	39157	Cdk8	Dmel_CG10572	NP_536735.2	454	Cyclin-dependent kinase 8
3L	NT_037436.4	9840508	9854812	-	39158	RasGAP1	Dmel_CG6721	NP_001261664.1	1181	Ras GTPase activating protein 1, isoform C
3L	NT_037436.4	9840562	9854812	-	39158	RasGAP1	Dmel_CG6721	NP_729562.1	1163	Ras GTPase activating protein 1, isoform B
3L	NT_037436.4	9840562	9854812	-	39158	RasGAP1	Dmel_CG6721	NP_524014.2	1163	Ras GTPase activating protein 1, isoform A
3L	NT_037436.4	9858413	9859489	-	39159	CG10809	Dmel_CG10809	NP_648365.1	358	uncharacterized protein Dmel_CG10809, isoform A
3L	NT_037436.4	9858413	9859489	-	39159	CG10809	Dmel_CG10809	NP_001163403.1	358	uncharacterized protein Dmel_CG10809, isoform B
3L	NT_037436.4	9860705	9863816	-	39160	iPLA2-VIA	Dmel_CG6718	NP_729567.2	887	calcium-independent phospholipase A2 VIA, isoform D
3L	NT_037436.4	9860705	9864202	-	39160	iPLA2-VIA	Dmel_CG6718	NP_648366.2	877	calcium-independent phospholipase A2 VIA, isoform A
3L	NT_037436.4	9860705	9863816	-	39160	iPLA2-VIA	Dmel_CG6718	NP_729565.2	887	calcium-independent phospholipase A2 VIA, isoform B
3L	NT_037436.4	9860705	9863816	-	39160	iPLA2-VIA	Dmel_CG6718	NP_729566.2	887	calcium-independent phospholipase A2 VIA, isoform C
3L	NT_037436.4	9865099	9870479	+	39161	CG8108	Dmel_CG8108	NP_648367.1	919	CG8108, isoform B
3L	NT_037436.4	9865099	9870479	+	39161	CG8108	Dmel_CG8108	NP_729568.1	919	CG8108, isoform A
3L	NT_037436.4	9879540	9884375	+	5740788	CG34382	Dmel_CG34382	NP_001097565.1	805	uncharacterized protein Dmel_CG34382, isoform C
3L	NT_037436.4	9879540	9884375	+	5740788	CG34382	Dmel_CG34382	NP_001261667.1	803	uncharacterized protein Dmel_CG34382, isoform F
3L	NT_037436.4	9879540	9884375	+	5740788	CG34382	Dmel_CG34382	NP_648369.2	805	uncharacterized protein Dmel_CG34382, isoform E
3L	NT_037436.4	9879540	9884375	+	5740788	CG34382	Dmel_CG34382	NP_001261665.1	803	uncharacterized protein Dmel_CG34382, isoform D
3L	NT_037436.4	9884603	9888569	-	39164	Taf2	Dmel_CG6711	NP_001261668.1	1221	TBP-associated factor 2, isoform B
3L	NT_037436.4	9884603	9888569	-	39164	Taf2	Dmel_CG6711	NP_729571.1	1221	TBP-associated factor 2, isoform A
3L	NT_037436.4	9889284	9892345	+	39165	CalpB	Dmel_CG8107	NP_524016.4	925	Calpain-B, isoform A
3L	NT_037436.4	9889284	9892345	+	39165	CalpB	Dmel_CG8107	NP_001246706.1	925	Calpain-B, isoform B
3L	NT_037436.4	9893320	9893780	-	39167	CG14164	Dmel_CG14164	NP_648370.1	117	CG6709, isoform A
3L	NT_037436.4	9893320	9893780	-	39167	CG14164	Dmel_CG14164	NP_001097567.1	117	CG6709, isoform B
3L	NT_037436.4	9893992	9894670	-	39167	CG14164	Dmel_CG14164	NP_648371.1	186	uncharacterized protein Dmel_CG14164, isoform A
3L	NT_037436.4	9893992	9894670	-	39167	CG14164	Dmel_CG14164	NP_001097566.1	186	uncharacterized protein Dmel_CG14164, isoform B
3L	NT_037436.4	9895760	9896729	-	39168	CG6707	Dmel_CG6707	NP_729576.1	231	CG6707, isoform B
3L	NT_037436.4	9895760	9898055	-	39168	CG6707	Dmel_CG6707	NP_648372.1	266	CG6707, isoform A
3L	NT_037436.4	9895760	9898055	-	39168	CG6707	Dmel_CG6707	NP_729575.1	266	CG6707, isoform C
3L	NT_037436.4	9900005	9902279	+	39169	nudE	Dmel_CG8104	NP_001287017.1	328	nudE, isoform F
3L	NT_037436.4	9900005	9901104	+	39169	nudE	Dmel_CG8104	NP_001137930.1	283	nudE, isoform D
3L	NT_037436.4	9900005	9902279	+	39169	nudE	Dmel_CG8104	NP_001287016.1	328	nudE, isoform E
3L	NT_037436.4	9900005	9902338	+	39169	nudE	Dmel_CG8104	NP_648373.1	317	nudE, isoform A
3L	NT_037436.4	9900005	9901836	+	39169	nudE	Dmel_CG8104	NP_001097569.1	377	nudE, isoform C
3L	NT_037436.4	9900005	9902279	+	39169	nudE	Dmel_CG8104	NP_001097568.1	328	nudE, isoform B
3L	NT_037436.4	9945320	9964918	+	5740442	bma	Dmel_CG34356	NP_001261669.1	834	black match, isoform E
3L	NT_037436.4	9945320	9964918	+	5740442	bma	Dmel_CG34356	NP_001261670.1	854	black match, isoform F
3L	NT_037436.4	9945320	9964918	+	5740442	bma	Dmel_CG34356	NP_001097570.2	834	black match, isoform D
3L	NT_037436.4	9967472	9968294	-	39172	CG6685	Dmel_CG6685	NP_001261671.1	213	CG6685, isoform B
3L	NT_037436.4	9967472	9968294	-	39172	CG6685	Dmel_CG6685	NP_648376.1	213	CG6685, isoform A
3L	NT_037436.4	9968888	9970749	+	39173	Dronc	Dmel_CG8091	NP_524017.1	450	death regulator Nedd2-like caspase
3L	NT_037436.4	9971210	9971972	-	39174	CG6674	Dmel_CG6674	NP_648377.1	233	CG6674, isoform A
3L	NT_037436.4	9971210	9971972	-	39174	CG6674	Dmel_CG6674	NP_001261672.1	214	CG6674, isoform B
3L	NT_037436.4	9972923	9973251	+	8673988	CG42455	Dmel_CG42455	NP_001163406.1	78	uncharacterized protein Dmel_CG42455, isoform C
3L	NT_037436.4	9972923	9973251	+	8673988	CG42455	Dmel_CG42455	NP_001163405.1	78	uncharacterized protein Dmel_CG42455, isoform B
3L	NT_037436.4	9972923	9973251	+	8673988	CG42455	Dmel_CG42455	NP_001163404.1	78	uncharacterized protein Dmel_CG42455, isoform A
3L	NT_037436.4	9973276	9973866	+	8673988	CG42455	Dmel_CG42455	NP_729583.1	196	variable nurse cells, isoform D
3L	NT_037436.4	9973276	9973866	+	8673988	CG42455	Dmel_CG42455	NP_729582.1	196	variable nurse cells, isoform C
3L	NT_037436.4	9973276	9973866	+	8673988	CG42455	Dmel_CG42455	NP_729581.1	196	variable nurse cells, isoform B
3L	NT_037436.4	9973276	9973866	+	8673988	CG42455	Dmel_CG42455	NP_729584.1	196	variable nurse cells, isoform E
3L	NT_037436.4	9973276	9973866	+	8673988	CG42455	Dmel_CG42455	NP_648378.1	196	variable nurse cells, isoform A
3L	NT_037436.4	10004032	10072014	+	50296	dpr6	Dmel_CG14162	NP_001261673.1	390	defective proboscis extension response 6, isoform C
3L	NT_037436.4	10004032	10072014	+	50296	dpr6	Dmel_CG14162	NP_001287018.1	396	defective proboscis extension response 6, isoform F
3L	NT_037436.4	10004032	10113228	+	50296	dpr6	Dmel_CG14162	NP_001261674.1	286	defective proboscis extension response 6, isoform D
3L	NT_037436.4	10004032	10138887	+	50296	dpr6	Dmel_CG14162	NP_001261675.1	283	defective proboscis extension response 6, isoform E
3L	NT_037436.4	10004032	10041056	+	50296	dpr6	Dmel_CG14162	NP_652439.1	283	defective proboscis extension response 6, isoform A
3L	NT_037436.4	10087142	10089135	-	39177	CG14160	Dmel_CG14160	NP_648380.2	483	uncharacterized protein Dmel_CG14160
3L	NT_037436.4	10090256	10092305	-	39178	CG32053	Dmel_CG32053	NP_729587.1	496	uncharacterized protein Dmel_CG32053
3L	NT_037436.4	10092832	10094719	-	326185	CG32054	Dmel_CG32054	NP_729588.1	563	uncharacterized protein Dmel_CG32054
3L	NT_037436.4	10095835	10098001	-	39179	CG42825	Dmel_CG42825	NP_729590.1	518	uncharacterized protein Dmel_CG42825
3L	NT_037436.4	10099357	10100881	-	10178905	CG42826	Dmel_CG42826	NP_001189079.1	473	uncharacterized protein Dmel_CG42826
3L	NT_037436.4	10149341	10182282	-	39180	dpr10	Dmel_CG32057	NP_729591.1	408	defective proboscis extension response 10, isoform A
3L	NT_037436.4	10149341	10182282	-	39180	dpr10	Dmel_CG32057	NP_001261676.1	362	defective proboscis extension response 10, isoform D
3L	NT_037436.4	10149341	10182282	-	39180	dpr10	Dmel_CG32057	NP_729592.1	408	defective proboscis extension response 10, isoform B
3L	NT_037436.4	10149341	10182282	-	39180	dpr10	Dmel_CG32057	NP_729593.1	408	defective proboscis extension response 10, isoform C
3L	NT_037436.4	10151964	10152756	+	39181	CG8072	Dmel_CG8072	NP_648384.1	247	CG8072
3L	NT_037436.4	10166068	10167020	-	39183	CG6628	Dmel_CG6628	NP_648386.1	277	CG6628
3L	NT_037436.4	10190443	10196433	-	44135	ect	Dmel_CG6611	NP_524706.2	581	ectodermal, isoform A
3L	NT_037436.4	10190443	10196433	-	44135	ect	Dmel_CG6611	NP_001261677.1	548	ectodermal, isoform E
3L	NT_037436.4	10190443	10196433	-	44135	ect	Dmel_CG6611	NP_001287019.1	589	ectodermal, isoform F
3L	NT_037436.4	10190443	10196433	-	44135	ect	Dmel_CG6611	NP_729596.1	581	ectodermal, isoform B
3L	NT_037436.4	10194799	10196433	-	44135	ect	Dmel_CG6611	NP_729597.2	280	ectodermal, isoform D
3L	NT_037436.4	10215712	10216674	+	39186	CG8065	Dmel_CG8065	NP_648387.2	300	CG8065, isoform B
3L	NT_037436.4	10215712	10216674	+	39186	CG8065	Dmel_CG8065	NP_001287020.1	300	CG8065, isoform C
3L	NT_037436.4	10218504	10220164	-	39188	CG32055	Dmel_CG32055	NP_729599.1	534	uncharacterized protein Dmel_CG32055
3L	NT_037436.4	10221073	10225030	-	326186	scramb1	Dmel_CG32056	NP_648389.3	416	scramblase 1, isoform A
3L	NT_037436.4	10221073	10222093	-	326186	scramb1	Dmel_CG32056	NP_729601.1	233	scramblase 1, isoform B
3L	NT_037436.4	10221073	10223207	-	326186	scramb1	Dmel_CG32056	NP_729600.1	332	scramblase 1, isoform C
3L	NT_037436.4	10243320	10244706	-	39189	Or67c	Dmel_CG14156	NP_524018.2	404	odorant receptor 67c
3L	NT_037436.4	10263987	10267065	-	45432	can	Dmel_CG6577	NP_524827.1	942	cannonball
3L	NT_037436.4	10273204	10274624	+	39191	Or67d	Dmel_CG14157	NP_648390.2	391	odorant receptor 67d
3L	NT_037436.4	10413037	10414572	+	39193	CG12362	Dmel_CG12362	NP_729606.1	511	uncharacterized protein Dmel_CG12362, isoform B
3L	NT_037436.4	10413037	10414572	+	39193	CG12362	Dmel_CG12362	NP_648392.1	511	uncharacterized protein Dmel_CG12362, isoform A
3L	NT_037436.4	10430259	10431983	-	39194	Ir67b	Dmel_CG12303	NP_648393.1	574	ionotropic receptor 67b
3L	NT_037436.4	10432384	10434105	-	317838	Ir67c	Dmel_CG32058	NP_729609.1	573	ionotropic receptor 67c
3L	NT_037436.4	10459882	10463026	-	39195	Gem3	Dmel_CG6539	NP_001261678.1	1028	Gemin3, isoform B
3L	NT_037436.4	10459882	10463026	-	39195	Gem3	Dmel_CG6539	NP_524019.1	1028	Gemin3, isoform A
3L	NT_037436.4	10463901	10464545	+	39196	CG32061	Dmel_CG32061	NP_729611.1	214	uncharacterized protein Dmel_CG32061
3L	NT_037436.4	10466512	10468119	+	326187	S-Lap3	Dmel_CG32063	NP_001261679.1	535	Sperm-Leucylaminopeptidase 3, isoform D
3L	NT_037436.4	10466512	10468119	+	326187	S-Lap3	Dmel_CG32063	NP_729612.1	535	Sperm-Leucylaminopeptidase 3, isoform B
3L	NT_037436.4	10466512	10468119	+	326187	S-Lap3	Dmel_CG32063	NP_648394.1	535	Sperm-Leucylaminopeptidase 3, isoform C
3L	NT_037436.4	10491174	10492748	+	326188	S-Lap4	Dmel_CG32064	NP_729613.1	524	Sperm-Leucylaminopeptidase 4
3L	NT_037436.4	10506501	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_001246707.1	962	RNA-binding Fox protein 1, isoform H
3L	NT_037436.4	10506501	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_001246708.1	858	RNA-binding Fox protein 1, isoform L
3L	NT_037436.4	10518295	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_729615.2	921	RNA-binding Fox protein 1, isoform K
3L	NT_037436.4	10518295	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_001261680.1	547	RNA-binding Fox protein 1, isoform M
3L	NT_037436.4	10518295	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_729614.2	889	RNA-binding Fox protein 1, isoform J
3L	NT_037436.4	10518295	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_001097574.2	796	RNA-binding Fox protein 1, isoform I
3L	NT_037436.4	10518295	10590209	+	39198	Rbfox1	Dmel_CG32062	NP_001097573.1	763	RNA-binding Fox protein 1, isoform F
3L	NT_037436.4	10518295	10590565	+	39198	Rbfox1	Dmel_CG32062	NP_001097572.1	865	RNA-binding Fox protein 1, isoform E
3L	NT_037436.4	10558363	10558925	-	39197	CG6527	Dmel_CG6527	NP_788493.1	166	CG6527, isoform A
3L	NT_037436.4	10558363	10558925	-	39197	CG6527	Dmel_CG6527	NP_001287021.1	166	CG6527, isoform B
3L	NT_037436.4	10623138	10623563	-	8674012	CG42521	Dmel_CG42521	NP_001163407.1	123	uncharacterized protein Dmel_CG42521
3L	NT_037436.4	10624806	10625563	-	8673982	CG43127	Dmel_CG43127	NP_001097575.2	190	uncharacterized protein Dmel_CG43127, isoform D
3L	NT_037436.4	10625133	10625563	-	8673982	CG43127	Dmel_CG43127	NP_001163410.1	105	uncharacterized protein Dmel_CG43127, isoform C
3L	NT_037436.4	10626568	10627375	+	5740238	CG34238	Dmel_CG34238	NP_001097576.1	206	uncharacterized protein Dmel_CG34238
3L	NT_037436.4	10627741	10628453	-	39201	CG14151	Dmel_CG14151	NP_648399.2	196	uncharacterized protein Dmel_CG14151
3L	NT_037436.4	10629218	10629996	-	8673967	CG42536	Dmel_CG42536	NP_001163411.1	184	uncharacterized protein Dmel_CG42536
3L	NT_037436.4	10630100	10630891	-	8674023	CG42535	Dmel_CG42535	NP_001163412.1	187	uncharacterized protein Dmel_CG42535
3L	NT_037436.4	10631176	10634572	+	3885640	CG34001	Dmel_CG34001	NP_001033999.2	149	uncharacterized protein Dmel_CG34001, isoform B
3L	NT_037436.4	10631176	10634572	+	3885640	CG34001	Dmel_CG34001	NP_001261681.1	139	uncharacterized protein Dmel_CG34001, isoform C
3L	NT_037436.4	10631408	10633921	+	39202	hay	Dmel_CG8019	NP_001137931.1	798	haywire, isoform B
3L	NT_037436.4	10631408	10633921	+	39202	hay	Dmel_CG8019	NP_524020.2	798	haywire, isoform A
3L	NT_037436.4	10634638	10637761	-	39203	E(z)	Dmel_CG6502	NP_524021.2	760	enhancer of zeste, isoform A
3L	NT_037436.4	10634638	10637761	-	39203	E(z)	Dmel_CG6502	NP_001261682.1	765	enhancer of zeste, isoform C
3L	NT_037436.4	10634638	10637761	-	39203	E(z)	Dmel_CG6502	NP_001137932.1	760	enhancer of zeste, isoform B
3L	NT_037436.4	10638304	10639369	+	39204	CG8009	Dmel_CG8009	NP_648400.1	131	CG8009, isoform B
3L	NT_037436.4	10638304	10639369	+	39204	CG8009	Dmel_CG8009	NP_729617.1	127	CG8009, isoform A
3L	NT_037436.4	10639799	10640053	+	39205	CG18628	Dmel_CG18628	NP_648401.1	63	uncharacterized protein Dmel_CG18628
3L	NT_037436.4	10641201	10659547	-	39206	CG32066	Dmel_CG32066	NP_729619.1	324	uncharacterized protein Dmel_CG32066, isoform B
3L	NT_037436.4	10641201	10659547	-	39206	CG32066	Dmel_CG32066	NP_729620.1	324	uncharacterized protein Dmel_CG32066, isoform C
3L	NT_037436.4	10641974	10642877	+	39207	CG14154	Dmel_CG14154	NP_648403.1	244	uncharacterized protein Dmel_CG14154, isoform B
3L	NT_037436.4	10642026	10642877	+	39207	CG14154	Dmel_CG14154	NP_729622.1	249	uncharacterized protein Dmel_CG14154, isoform A
3L	NT_037436.4	10643543	10644322	+	39208	CG14153	Dmel_CG14153	NP_648404.1	237	uncharacterized protein Dmel_CG14153
3L	NT_037436.4	10661575	10662926	+	39210	CG8003	Dmel_CG8003	NP_001261683.1	407	CG8003, isoform B
3L	NT_037436.4	10661575	10662926	+	39210	CG8003	Dmel_CG8003	NP_648406.1	407	CG8003, isoform A
3L	NT_037436.4	10663446	10664365	+	326189	Adi1	Dmel_CG32068	NP_001097577.1	186	acireductone dioxygenase 1
3L	NT_037436.4	10685050	10689110	+	39212	simj	Dmel_CG32067	NP_729624.1	916	simjang, isoform A
3L	NT_037436.4	10685050	10689110	+	39212	simj	Dmel_CG32067	NP_001261685.1	937	simjang, isoform E
3L	NT_037436.4	10685050	10689110	+	39212	simj	Dmel_CG32067	NP_729625.1	916	simjang, isoform B
3L	NT_037436.4	10685050	10689110	+	39212	simj	Dmel_CG32067	NP_648407.1	912	simjang, isoform C
3L	NT_037436.4	10685050	10689110	+	39212	simj	Dmel_CG32067	NP_001261684.1	924	simjang, isoform D
3L	NT_037436.4	10691176	10691877	+	39213	CG11811	Dmel_CG11811	NP_648408.1	233	uncharacterized protein Dmel_CG11811
3L	NT_037436.4	10692759	10693123	-	2768994	CG33493	Dmel_CG33493	NP_001261686.1	94	uncharacterized protein Dmel_CG33493, isoform B
3L	NT_037436.4	10692815	10693123	-	2768994	CG33493	Dmel_CG33493	NP_996038.1	102	uncharacterized protein Dmel_CG33493, isoform A
3L	NT_037436.4	10693315	10694017	-	39214	ND-13B	Dmel_CG6463	NP_648409.1	124	NADH dehydrogenase (ubiquinone) 13 kDa B subunit
3L	NT_037436.4	10694535	10696644	-	39215	NijA	Dmel_CG6449	NP_996039.1	229	ninjurin A, isoform C
3L	NT_037436.4	10694535	10696644	-	39215	NijA	Dmel_CG6449	NP_996040.1	245	ninjurin A, isoform B
3L	NT_037436.4	10694535	10696644	-	39215	NijA	Dmel_CG6449	NP_648410.1	241	ninjurin A, isoform A
3L	NT_037436.4	10694535	10696644	-	39215	NijA	Dmel_CG6449	NP_001261687.1	225	ninjurin A, isoform D
3L	NT_037436.4	10772356	10772867	+	12798172	CG43245	Dmel_CG43245	NP_001261688.1	66	uncharacterized protein Dmel_CG43245, isoform B
3L	NT_037436.4	10772356	10772867	+	12798172	CG43245	Dmel_CG43245	NP_001246709.1	66	uncharacterized protein Dmel_CG43245, isoform A
3L	NT_037436.4	10801230	10801982	+	39216	CG12523	Dmel_CG12523	NP_001287022.1	250	uncharacterized protein Dmel_CG12523, isoform B
3L	NT_037436.4	10801230	10801982	+	39216	CG12523	Dmel_CG12523	NP_648411.1	250	uncharacterized protein Dmel_CG12523, isoform A
3L	NT_037436.4	10815069	10815443	+	10178844	CG42831	Dmel_CG42831	NP_001189080.1	124	uncharacterized protein Dmel_CG42831
3L	NT_037436.4	10858622	10874467	+	39217	tna	Dmel_CG7958	NP_648412.2	1135	tonalli, isoform A
3L	NT_037436.4	10869934	10874467	+	39217	tna	Dmel_CG7958	NP_729629.2	1149	tonalli, isoform B
3L	NT_037436.4	10870054	10874467	+	39217	tna	Dmel_CG7958	NP_001163413.1	1109	tonalli, isoform D
3L	NT_037436.4	10876570	10878945	-	39218	CG6418	Dmel_CG6418	NP_648413.1	791	CG6418
3L	NT_037436.4	10879170	10879733	+	39219	Blos4	Dmel_CG14149	NP_001261689.1	169	biogenesis of lysosome-related organelles complex 1, subunit 4, isoform B
3L	NT_037436.4	10879170	10879733	+	39219	Blos4	Dmel_CG14149	NP_648414.1	169	biogenesis of lysosome-related organelles complex 1, subunit 4, isoform A
3L	NT_037436.4	10880792	10882018	-	39220	CG6409	Dmel_CG6409	NP_648415.1	360	CG6409, isoform A
3L	NT_037436.4	10880792	10882018	-	39220	CG6409	Dmel_CG6409	NP_001287023.1	360	CG6409, isoform B
3L	NT_037436.4	10882963	10883488	+	39221	galla-2	Dmel_CG7949	NP_648416.1	156	galla-2
3L	NT_037436.4	10884475	10885985	-	39222	CG6404	Dmel_CG6404	NP_729634.1	441	CG6404, isoform A
3L	NT_037436.4	10884475	10885985	-	39222	CG6404	Dmel_CG6404	NP_648417.1	441	CG6404, isoform B
3L	NT_037436.4	10890049	10890610	+	39223	Cpr67Fa1	Dmel_CG7941	NP_648418.1	134	cuticular protein 67Fa1
3L	NT_037436.4	10891768	10892410	+	39224	Cpr67Fa2	Dmel_CG18349	NP_648419.1	134	cuticular protein 67Fa2
3L	NT_037436.4	10894191	10894623	+	39225	Cpr67Fb	Dmel_CG18348	NP_648420.1	122	cuticular protein 67Fb
3L	NT_037436.4	10896131	10896877	-	39226	Aps	Dmel_CG6391	NP_729639.1	177	Aps, isoform B
3L	NT_037436.4	10896131	10896877	-	39226	Aps	Dmel_CG6391	NP_648421.1	177	Aps, isoform A
3L	NT_037436.4	10896131	10896877	-	39226	Aps	Dmel_CG6391	NP_729640.1	177	Aps, isoform C
3L	NT_037436.4	10972738	10973267	+	39227	CG14147	Dmel_CG14147	NP_648422.1	153	uncharacterized protein Dmel_CG14147
3L	NT_037436.4	10982445	10984901	-	39228	klu	Dmel_CG12296	NP_001261690.1	818	klumpfuss, isoform B
3L	NT_037436.4	10982490	10984901	-	39228	klu	Dmel_CG12296	NP_001261691.1	803	klumpfuss, isoform C
3L	NT_037436.4	10982490	10984901	-	39228	klu	Dmel_CG12296	NP_477062.1	803	klumpfuss, isoform A
3L	NT_037436.4	10982490	10984901	-	39228	klu	Dmel_CG12296	NP_001287024.1	803	klumpfuss, isoform D
3L	NT_037436.4	11023539	11024606	+	44006	Fad2	Dmel_CG7923	NP_651966.2	355	Fad2
3L	NT_037436.4	11025561	11027332	+	39230	CG32079	Dmel_CG32079	NP_729645.3	457	uncharacterized protein Dmel_CG32079
3L	NT_037436.4	11027605	11029320	+	326194	CG32081	Dmel_CG32081	NP_729646.1	471	uncharacterized protein Dmel_CG32081
3L	NT_037436.4	11036981	11046231	-	39231	CG43693	Dmel_CG43693	NP_729648.1	502	uncharacterized protein Dmel_CG43693, isoform B
3L	NT_037436.4	11036981	11039748	-	39231	CG43693	Dmel_CG43693	NP_001261692.1	455	uncharacterized protein Dmel_CG43693, isoform F
3L	NT_037436.4	11036981	11051279	-	39231	CG43693	Dmel_CG43693	NP_996041.1	490	uncharacterized protein Dmel_CG43693, isoform D
3L	NT_037436.4	11036981	11050336	-	39231	CG43693	Dmel_CG43693	NP_001261693.1	499	uncharacterized protein Dmel_CG43693, isoform E
3L	NT_037436.4	11036981	11051279	-	39231	CG43693	Dmel_CG43693	NP_001261694.1	572	uncharacterized protein Dmel_CG43693, isoform G
3L	NT_037436.4	11036981	11046231	-	39231	CG43693	Dmel_CG43693	NP_648424.1	502	uncharacterized protein Dmel_CG43693, isoform A
3L	NT_037436.4	11036981	11039829	-	39231	CG43693	Dmel_CG43693	NP_729649.2	482	uncharacterized protein Dmel_CG43693, isoform C
3L	NT_037436.4	11057179	11059250	+	39232	CG7888	Dmel_CG7888	NP_648425.1	465	CG7888, isoform B
3L	NT_037436.4	11057556	11059250	+	39232	CG7888	Dmel_CG7888	NP_729651.1	462	CG7888, isoform A
3L	NT_037436.4	11057556	11059250	+	39232	CG7888	Dmel_CG7888	NP_729652.1	462	CG7888, isoform C
3L	NT_037436.4	11059679	11061129	-	39233	CG6321	Dmel_CG6321	NP_648426.1	418	CG6321
3L	NT_037436.4	11061639	11062118	+	39234	Blos2	Dmel_CG14145	NP_648427.1	159	biogenesis of lysosome-related organelles complex 1, subunit 2
3L	NT_037436.4	11062173	11062543	-	39235	CG32069	Dmel_CG32069	NP_729654.1	80	uncharacterized protein Dmel_CG32069
3L	NT_037436.4	11062774	11064660	-	326192	CG32075	Dmel_CG32075	NP_001246712.1	541	uncharacterized protein Dmel_CG32075, isoform B
3L	NT_037436.4	11062774	11064660	-	326192	CG32075	Dmel_CG32075	NP_648428.1	541	uncharacterized protein Dmel_CG32075, isoform A
3L	NT_037436.4	11065168	11065374	+	19834824	CG45101	Dmel_CG45101	NP_001287025.1	68	uncharacterized protein Dmel_CG45101
3L	NT_037436.4	11065395	11068542	+	19834824	CG45101	Dmel_CG45101	NP_524835.1	962	suppressor of Under-Replication
3L	NT_037436.4	11069131	11069844	-	39237	CG6310	Dmel_CG6310	NP_648429.2	193	CG6310
3L	NT_037436.4	11070815	11073157	+	39238	Mocs1	Dmel_CG33048	NP_788494.1	565	molybdenum cofactor synthesis 1, isoform C
3L	NT_037436.4	11070815	11072525	+	39238	Mocs1	Dmel_CG33048	NP_788495.1	385	molybdenum cofactor synthesis 1, isoform A
3L	NT_037436.4	11073711	11074246	-	46121	Pfdn2	Dmel_CG6302	NP_729659.1	143	prefoldin 2, isoform A
3L	NT_037436.4	11073711	11074246	-	46121	Pfdn2	Dmel_CG6302	NP_001261696.1	143	prefoldin 2, isoform B
3L	NT_037436.4	11074861	11078639	+	39240	CG7839	Dmel_CG7839	NP_648431.3	1174	CG7839
3L	NT_037436.4	11080623	11091639	-	39241	JIL-1	Dmel_CG6297	NP_648432.1	1207	JIL-1 kinase, isoform B
3L	NT_037436.4	11080623	11091639	-	39241	JIL-1	Dmel_CG6297	NP_001261697.1	1207	JIL-1 kinase, isoform C
3L	NT_037436.4	11080623	11091639	-	39241	JIL-1	Dmel_CG6297	NP_729661.1	1207	JIL-1 kinase, isoform A
3L	NT_037436.4	11093433	11094351	-	39242	CG6279	Dmel_CG6279	NP_001163414.1	287	CG6279, isoform B
3L	NT_037436.4	11093433	11096049	-	39242	CG6279	Dmel_CG6279	NP_648433.1	757	CG6279, isoform A
3L	NT_037436.4	11097013	11098141	+	26067039	CG33947	Dmel_CG33947	NP_001303412.1	32	uncharacterized protein Dmel_CG33947
3L	NT_037436.4	11097642	11098110	-	39243	CG6272	Dmel_CG6272	NP_001261698.1	113	CG6272, isoform B
3L	NT_037436.4	11097642	11098110	-	39243	CG6272	Dmel_CG6272	NP_648434.1	113	CG6272, isoform A
3L	NT_037436.4	11098685	11100559	+	39244	APP-BP1	Dmel_CG7828	NP_648435.1	524	beta-Amyloid precursor protein binding protein 1, isoform A
3L	NT_037436.4	11098685	11100559	+	39244	APP-BP1	Dmel_CG7828	NP_001261699.1	524	beta-Amyloid precursor protein binding protein 1, isoform B
3L	NT_037436.4	11100682	11101675	-	39245	Elo68beta	Dmel_CG11801	NP_001097580.1	269	elongase 68beta
3L	NT_037436.4	11101999	11103006	-	317841	Elo68alpha	Dmel_CG32072	NP_729666.2	262	elongase 68alpha
3L	NT_037436.4	11103421	11103873	-	39246	CG32071	Dmel_CG32071	NP_729667.1	150	uncharacterized protein Dmel_CG32071
3L	NT_037436.4	11107028	11107357	-	326191	CG32073	Dmel_CG32073	NP_729668.1	109	uncharacterized protein Dmel_CG32073, isoform A
3L	NT_037436.4	11107028	11107357	-	326191	CG32073	Dmel_CG32073	NP_001287026.1	109	uncharacterized protein Dmel_CG32073, isoform B
3L	NT_037436.4	11108263	11108676	+	39248	CG12522	Dmel_CG12522	NP_648438.1	137	uncharacterized protein Dmel_CG12522
3L	NT_037436.4	11108864	11109475	-	3885632	CG34012	Dmel_CG34012	NP_001034001.1	158	uncharacterized protein Dmel_CG34012
3L	NT_037436.4	11109837	11111864	+	39250	CG7638	Dmel_CG7638	NP_648439.1	496	CG7638
3L	NT_037436.4	11112453	11113639	-	39251	Sod1	Dmel_CG11793	NP_001261700.1	167	superoxide dismutase 1, isoform D
3L	NT_037436.4	11112453	11113639	-	39251	Sod1	Dmel_CG11793	NP_476735.1	153	superoxide dismutase 1, isoform A
3L	NT_037436.4	11115043	11118014	-	39252	FoxK	Dmel_CG11799	NP_001261701.1	760	forkhead box K, isoform N
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_648440.2	746	forkhead box K, isoform G
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_729673.2	746	forkhead box K, isoform H
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_001261703.1	745	forkhead box K, isoform P
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_729675.2	746	forkhead box K, isoform J
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_001261702.1	745	forkhead box K, isoform O
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_729672.1	740	forkhead box K, isoform K
3L	NT_037436.4	11115085	11118014	-	39252	FoxK	Dmel_CG11799	NP_729674.2	746	forkhead box K, isoform I
3L	NT_037436.4	11120941	11121981	+	39253	mRpL2	Dmel_CG7636	NP_524022.1	294	mitochondrial ribosomal protein L2
3L	NT_037436.4	11122041	11123048	-	39254	Ufd1-like	Dmel_CG6233	NP_524023.1	316	ubiquitin fusion-degradation 1-like
3L	NT_037436.4	11129688	11134000	+	39255	NaPi-III	Dmel_CG42575	NP_648441.1	667	N
3L	NT_037436.4	11129688	11134000	+	39255	NaPi-III	Dmel_CG42575	NP_001261704.1	667	N
3L	NT_037436.4	11130870	11131262	+	64867	nol	Dmel_CG32077	NP_525014.2	130	no optic lobe
3L	NT_037436.4	11131988	11132320	-	317842	CG32074	Dmel_CG32074	NP_729676.1	110	uncharacterized protein Dmel_CG32074
3L	NT_037436.4	11134997	11135341	+	39256	CG14143	Dmel_CG14143	NP_648442.1	114	uncharacterized protein Dmel_CG14143
3L	NT_037436.4	11149907	11150670	-	39257	CG6216	Dmel_CG6216	NP_996042.1	235	CG6216
3L	NT_037436.4	11151513	11163423	+	39258	IRSp53	Dmel_CG32082	NP_001097583.2	629	IRSp53, isoform D
3L	NT_037436.4	11151513	11163642	+	39258	IRSp53	Dmel_CG32082	NP_001287027.1	646	IRSp53, isoform E
3L	NT_037436.4	11151513	11162849	+	39258	IRSp53	Dmel_CG32082	NP_729679.2	1076	IRSp53, isoform A
3L	NT_037436.4	11151513	11163423	+	39258	IRSp53	Dmel_CG32082	NP_001097582.1	630	IRSp53, isoform B
3L	NT_037436.4	11165076	11166546	+	326193	Alg10	Dmel_CG32076	NP_729680.1	449	alpha 3 glucosyltransferase
3L	NT_037436.4	11167229	11169445	-	39259	wls	Dmel_CG6210	NP_648445.1	594	wntless, isoform A
3L	NT_037436.4	11167229	11169445	-	39259	wls	Dmel_CG6210	NP_729681.1	562	wntless, isoform B
3L	NT_037436.4	11170135	11172083	+	39260	CG7616	Dmel_CG7616	NP_648446.1	557	CG7616, isoform A
3L	NT_037436.4	11170135	11172083	+	39260	CG7616	Dmel_CG7616	NP_001261705.1	557	CG7616, isoform B
3L	NT_037436.4	11173575	11174830	+	39261	CG14142	Dmel_CG14142	NP_001163415.1	241	uncharacterized protein Dmel_CG14142, isoform C
3L	NT_037436.4	11173575	11175835	+	39261	CG14142	Dmel_CG14142	NP_648447.2	447	uncharacterized protein Dmel_CG14142, isoform B
3L	NT_037436.4	11173575	11174760	+	39261	CG14142	Dmel_CG14142	NP_001163416.1	193	uncharacterized protein Dmel_CG14142, isoform D
3L	NT_037436.4	11178418	11183834	-	39262	GlcAT-P	Dmel_CG6207	NP_001014581.1	316	GlcAT-P, isoform C
3L	NT_037436.4	11178418	11183834	-	39262	GlcAT-P	Dmel_CG6207	NP_001246714.1	316	GlcAT-P, isoform E
3L	NT_037436.4	11178418	11183834	-	39262	GlcAT-P	Dmel_CG6207	NP_648448.1	479	GlcAT-P, isoform A
3L	NT_037436.4	11178418	11183834	-	39262	GlcAT-P	Dmel_CG6207	NP_001246713.1	479	GlcAT-P, isoform D
3L	NT_037436.4	11178418	11183834	-	39262	GlcAT-P	Dmel_CG6207	NP_729685.2	316	GlcAT-P, isoform B
3L	NT_037436.4	11198426	11205812	-	39265	Plod	Dmel_CG6199	NP_729687.1	721	procollagen lysyl hydroxylase, isoform B
3L	NT_037436.4	11198426	11205812	-	39265	Plod	Dmel_CG6199	NP_648451.1	721	procollagen lysyl hydroxylase, isoform A
3L	NT_037436.4	11199677	11200480	+	39263	CG7607	Dmel_CG7607	NP_648449.1	167	CG7607
3L	NT_037436.4	11201463	11202004	+	39264	CG14141	Dmel_CG14141	NP_648450.3	162	uncharacterized protein Dmel_CG14141
3L	NT_037436.4	11206797	11210206	-	39266	Ube3a	Dmel_CG6190	NP_648452.1	973	ubiquitin protein ligase E3A
3L	NT_037436.4	11210937	11213780	+	39267	CG7600	Dmel_CG7600	NP_648453.1	928	CG7600
3L	NT_037436.4	11216829	11229353	+	39268	CG42671	Dmel_CG42671	NP_001189082.1	1301	uncharacterized protein Dmel_CG42671, isoform F
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_001246715.1	1233	uncharacterized protein Dmel_CG42671, isoform G
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_729690.1	1233	uncharacterized protein Dmel_CG42671, isoform E
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_001246716.1	1233	uncharacterized protein Dmel_CG42671, isoform H
3L	NT_037436.4	11216829	11227742	+	39268	CG42671	Dmel_CG42671	NP_001261706.1	1244	uncharacterized protein Dmel_CG42671, isoform I
3L	NT_037436.4	11216829	11229353	+	39268	CG42671	Dmel_CG42671	NP_001287029.1	1302	uncharacterized protein Dmel_CG42671, isoform K
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_001287028.1	1234	uncharacterized protein Dmel_CG42671, isoform J
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_648454.1	1233	uncharacterized protein Dmel_CG42671, isoform C
3L	NT_037436.4	11216829	11229353	+	39268	CG42671	Dmel_CG42671	NP_001287030.1	1302	uncharacterized protein Dmel_CG42671, isoform L
3L	NT_037436.4	11216829	11227709	+	39268	CG42671	Dmel_CG42671	NP_001189083.1	1233	uncharacterized protein Dmel_CG42671, isoform B
3L	NT_037436.4	11216829	11229353	+	39268	CG42671	Dmel_CG42671	NP_001189084.1	1301	uncharacterized protein Dmel_CG42671, isoform D
3L	NT_037436.4	11233020	11235938	-	39269	Ir68a	Dmel_CG6185	NP_648455.2	704	ionotropic receptor 68a, isoform A
3L	NT_037436.4	11233020	11235938	-	39269	Ir68a	Dmel_CG6185	NP_001287031.1	703	ionotropic receptor 68a, isoform B
3L	NT_037436.4	11252891	11254475	+	39270	scyl	Dmel_CG7590	NP_648456.2	280	scylla, isoform A
3L	NT_037436.4	11252891	11254475	+	39270	scyl	Dmel_CG7590	NP_996043.2	280	scylla, isoform C
3L	NT_037436.4	11288851	11294588	-	39271	CG6175	Dmel_CG6175	NP_001261707.1	558	CG6175, isoform C
3L	NT_037436.4	11288851	11294588	-	39271	CG6175	Dmel_CG6175	NP_001261708.1	569	CG6175, isoform D
3L	NT_037436.4	11288851	11294588	-	39271	CG6175	Dmel_CG6175	NP_648457.1	558	CG6175, isoform B
3L	NT_037436.4	11311797	11313358	+	39272	CG7573	Dmel_CG7573	NP_729695.2	477	CG7573
3L	NT_037436.4	11320691	11321719	-	39273	CG6168	Dmel_CG6168	NP_648459.1	342	CG6168, isoform B
3L	NT_037436.4	11320691	11321719	-	39273	CG6168	Dmel_CG6168	NP_001287032.1	342	CG6168, isoform C
3L	NT_037436.4	11362605	11364771	-	39274	CG6163	Dmel_CG6163	NP_648460.1	428	CG6163, isoform A
3L	NT_037436.4	11362605	11364771	-	39274	CG6163	Dmel_CG6163	NP_001261709.1	428	CG6163, isoform B
3L	NT_037436.4	11394771	11395646	+	39275	CG11726	Dmel_CG11726	NP_648461.1	291	uncharacterized protein Dmel_CG11726
3L	NT_037436.4	11397542	11397865	+	19835887	CG44362	Dmel_CG44362	NP_001287033.1	107	uncharacterized protein Dmel_CG44362
3L	NT_037436.4	11425182	11426362	+	39276	CG7560	Dmel_CG7560	NP_648462.1	349	CG7560
3L	NT_037436.4	11434757	11435461	-	39277	CG6149	Dmel_CG6149	NP_648463.2	234	CG6149
3L	NT_037436.4	11445299	11446429	+	39278	CG7557	Dmel_CG7557	NP_648464.1	355	CG7557, isoform A
3L	NT_037436.4	11445299	11446429	+	39278	CG7557	Dmel_CG7557	NP_729701.1	336	CG7557, isoform B
3L	NT_037436.4	11457156	11458292	-	39279	CG12289	Dmel_CG12289	NP_648465.2	378	uncharacterized protein Dmel_CG12289
3L	NT_037436.4	11458560	11459528	+	39280	CG7551	Dmel_CG7551	NP_648466.1	322	CG7551
3L	NT_037436.4	11463768	11465307	-	39281	CG6140	Dmel_CG6140	NP_001261710.1	470	CG6140, isoform B
3L	NT_037436.4	11463768	11465307	-	39281	CG6140	Dmel_CG6140	NP_648467.1	470	CG6140, isoform A
3L	NT_037436.4	11473408	11473884	+	317846	Vha16-3	Dmel_CG32090	NP_001189086.1	158	vacuolar 
3L	NT_037436.4	11473408	11473884	+	317846	Vha16-3	Dmel_CG32090	NP_729706.1	158	vacuolar 
3L	NT_037436.4	11474998	11475474	+	39282	Vha16-2	Dmel_CG32089	NP_729707.1	158	vacuolar 
3L	NT_037436.4	11488535	11495095	+	39284	chrb	Dmel_CG7533	NP_648470.2	299	charybde, isoform C
3L	NT_037436.4	11494221	11495095	+	39284	chrb	Dmel_CG7533	NP_001287034.1	233	charybde, isoform E
3L	NT_037436.4	11508637	11508903	+	2768957	CG33500	Dmel_CG33500	NP_996044.1	88	uncharacterized protein Dmel_CG33500
3L	NT_037436.4	11509059	11509355	-	39285	Sgs8	Dmel_CG6132	NP_476719.2	75	salivary gland secretion 8
3L	NT_037436.4	11509896	11510186	+	47198	Sgs7	Dmel_CG18087	NP_476718.1	74	salivary gland secretion 7
3L	NT_037436.4	11510323	11510589	-	2768958	CG33272	Dmel_CG33272	NP_996045.1	88	uncharacterized protein Dmel_CG33272
3L	NT_037436.4	11512235	11513231	+	39288	Sgs3	Dmel_CG11720	NP_524024.1	307	salivary gland secretion 3
3L	NT_037436.4	11514864	11518763	+	39289	CG7512	Dmel_CG7512	NP_001097585.3	540	CG7512
3L	NT_037436.4	11518910	11520746	-	3772566	CG11714	Dmel_CG11714	NP_001303363.1	494	alpha-L-fucosidase, isoform C
3L	NT_037436.4	11518910	11520746	-	3772566	CG11714	Dmel_CG11714	NP_648472.1	494	alpha-L-fucosidase, isoform B
3L	NT_037436.4	11521366	11522568	-	3772566	CG11714	Dmel_CG11714	NP_001027123.1	383	uncharacterized protein Dmel_CG11714, isoform A
3L	NT_037436.4	11521366	11522568	-	3772566	CG11714	Dmel_CG11714	NP_001261712.1	371	uncharacterized protein Dmel_CG11714, isoform C
3L	NT_037436.4	11521366	11522568	-	3772566	CG11714	Dmel_CG11714	NP_001303393.1	383	uncharacterized protein Dmel_CG11714, isoform D
3L	NT_037436.4	11524481	11558681	-	39293	Mob2	Dmel_CG11711	NP_729714.1	566	Mob2, isoform D
3L	NT_037436.4	11524481	11527777	-	39293	Mob2	Dmel_CG11711	NP_001261713.1	537	Mob2, isoform E
3L	NT_037436.4	11524481	11561898	-	39293	Mob2	Dmel_CG11711	NP_648474.1	431	Mob2, isoform C
3L	NT_037436.4	11524481	11542673	-	39293	Mob2	Dmel_CG11711	NP_729715.2	728	Mob2, isoform A
3L	NT_037436.4	11524481	11527777	-	39293	Mob2	Dmel_CG11711	NP_729716.1	537	Mob2, isoform B
3L	NT_037436.4	11562735	11563416	+	39294	CG7394	Dmel_CG7394	NP_648475.1	118	CG7394, isoform A
3L	NT_037436.4	11562735	11563416	+	39294	CG7394	Dmel_CG7394	NP_001261714.1	118	CG7394, isoform D
3L	NT_037436.4	11562735	11563416	+	39294	CG7394	Dmel_CG7394	NP_001246717.1	118	CG7394, isoform C
3L	NT_037436.4	11562828	11563416	+	39294	CG7394	Dmel_CG7394	NP_001137933.1	128	CG7394, isoform B
3L	NT_037436.4	11564742	11572598	+	2768969	CG33267	Dmel_CG33267	NP_996046.2	94	uncharacterized protein Dmel_CG33267
3L	NT_037436.4	11572887	11574601	-	2768970	CG33490	Dmel_CG33490	NP_996047.1	530	uncharacterized protein Dmel_CG33490
3L	NT_037436.4	11574826	11576849	-	2768971	CG33489	Dmel_CG33489	NP_996048.1	497	uncharacterized protein Dmel_CG33489, isoform A
3L	NT_037436.4	11574826	11576849	-	2768971	CG33489	Dmel_CG33489	NP_001261715.1	497	uncharacterized protein Dmel_CG33489, isoform B
3L	NT_037436.4	11577169	11577435	-	2768972	CG33271	Dmel_CG33271	NP_996049.1	88	uncharacterized protein Dmel_CG33271
3L	NT_037436.4	11578287	11578553	-	2768982	CG33270	Dmel_CG33270	NP_996050.1	88	uncharacterized protein Dmel_CG33270
3L	NT_037436.4	11579777	11579899	-	12798201	CG43390	Dmel_CG43390	NP_001246718.1	40	uncharacterized protein Dmel_CG43390
3L	NT_037436.4	11580864	11580986	-	12798202	CG43391	Dmel_CG43391	NP_001246719.1	40	uncharacterized protein Dmel_CG43391
3L	NT_037436.4	11581850	11582116	-	2768983	CG33269	Dmel_CG33269	NP_001246720.1	88	uncharacterized protein Dmel_CG33269, isoform B
3L	NT_037436.4	11581850	11582116	-	2768983	CG33269	Dmel_CG33269	NP_996051.1	88	uncharacterized protein Dmel_CG33269, isoform A
3L	NT_037436.4	11582442	11584033	-	326195	CG32086	Dmel_CG32086	NP_001246721.1	475	uncharacterized protein Dmel_CG32086, isoform B
3L	NT_037436.4	11582442	11584033	-	326195	CG32086	Dmel_CG32086	NP_729720.1	491	uncharacterized protein Dmel_CG32086, isoform A
3L	NT_037436.4	11584291	11587332	-	39297	rt	Dmel_CG6097	NP_524025.2	886	rotated abdomen
3L	NT_037436.4	11589695	11589979	+	2768978	CG7377	Dmel_CG7377	NP_996052.1	94	CG7377
3L	NT_037436.4	11590938	11591222	-	2768979	CG33268	Dmel_CG33268	NP_996053.1	94	uncharacterized protein Dmel_CG33268
3L	NT_037436.4	11599636	11599947	-	39300	CG14137	Dmel_CG14137	NP_648480.1	103	uncharacterized protein Dmel_CG14137
3L	NT_037436.4	11602723	11604469	+	39301	CG7368	Dmel_CG7368	NP_001246722.1	530	CG7368, isoform C
3L	NT_037436.4	11602723	11604469	+	39301	CG7368	Dmel_CG7368	NP_001036599.1	530	CG7368, isoform B
3L	NT_037436.4	11606104	11608837	-	39302	CG6091	Dmel_CG6091	NP_648482.3	659	CG6091, isoform E
3L	NT_037436.4	11606104	11607933	-	39302	CG6091	Dmel_CG6091	NP_729724.2	499	CG6091, isoform D
3L	NT_037436.4	11606104	11608837	-	39302	CG6091	Dmel_CG6091	NP_729723.2	659	CG6091, isoform F
3L	NT_037436.4	11606499	11608837	-	39302	CG6091	Dmel_CG6091	NP_001163417.1	568	CG6091, isoform G
3L	NT_037436.4	11610135	11610332	+	10178785	CG42832	Dmel_CG42832	NP_001189087.1	65	uncharacterized protein Dmel_CG42832
3L	NT_037436.4	11610665	11620072	-	2768980	Muc68Ca	Dmel_CG18331	NP_996054.1	3135	mucin 68Ca
3L	NT_037436.4	11620620	11624347	-	39304	CG6084	Dmel_CG6084	NP_001261716.1	350	CG6084, isoform C
3L	NT_037436.4	11620620	11623616	-	39304	CG6084	Dmel_CG6084	NP_648484.1	316	CG6084, isoform A
3L	NT_037436.4	11621058	11624347	-	39304	CG6084	Dmel_CG6084	NP_729726.1	350	CG6084, isoform B
3L	NT_037436.4	11621058	11623616	-	39304	CG6084	Dmel_CG6084	NP_001261717.1	316	CG6084, isoform D
3L	NT_037436.4	11624726	11625984	-	39305	CG6083	Dmel_CG6083	NP_648485.1	322	CG6083
3L	NT_037436.4	11626480	11627667	+	39306	PCID2	Dmel_CG7351	NP_648486.1	395	PCI domain-containing protein 2
3L	NT_037436.4	11628454	11629607	+	59176	CG18815	Dmel_CG18815	NP_996056.1	216	uncharacterized protein Dmel_CG18815, isoform B
3L	NT_037436.4	11628454	11629607	+	59176	CG18815	Dmel_CG18815	NP_996055.1	216	uncharacterized protein Dmel_CG18815, isoform C
3L	NT_037436.4	11628454	11630253	+	59176	CG18815	Dmel_CG18815	NP_001261718.1	221	uncharacterized protein Dmel_CG18815, isoform D
3L	NT_037436.4	11628454	11630523	+	59176	CG18815	Dmel_CG18815	NP_001261719.1	232	uncharacterized protein Dmel_CG18815, isoform E
3L	NT_037436.4	11628454	11629607	+	59176	CG18815	Dmel_CG18815	NP_652674.1	216	uncharacterized protein Dmel_CG18815, isoform A
3L	NT_037436.4	11635101	11642493	+	39307	CG32091	Dmel_CG32091	NP_729728.1	623	uncharacterized protein Dmel_CG32091
3L	NT_037436.4	11642943	11646033	-	39308	CG6071	Dmel_CG6071	NP_648488.1	962	CG6071
3L	NT_037436.4	11646422	11648299	-	39309	RIOK1	Dmel_CG11660	NP_729730.1	585	RIO kinase 1, isoform B
3L	NT_037436.4	11646422	11648299	-	39309	RIOK1	Dmel_CG11660	NP_648489.1	585	RIO kinase 1, isoform A
3L	NT_037436.4	11648841	11649679	+	39310	CG7339	Dmel_CG7339	NP_648490.1	240	CG7339, isoform A
3L	NT_037436.4	11648841	11649679	+	39310	CG7339	Dmel_CG7339	NP_001261720.1	240	CG7339, isoform B
3L	NT_037436.4	11650970	11675482	-	39311	CG32085	Dmel_CG32085	NP_729732.1	666	uncharacterized protein Dmel_CG32085
3L	NT_037436.4	11682312	11683669	+	39313	TfIIEalpha	Dmel_CG10415	NP_524026.1	429	transcription factor IIEalpha
3L	NT_037436.4	11684582	11689181	+	39314	Sugb	Dmel_CG7334	NP_996057.3	590	sugar baby, isoform F
3L	NT_037436.4	11684582	11688460	+	39314	Sugb	Dmel_CG7334	NP_648493.3	604	sugar baby, isoform C
3L	NT_037436.4	11684582	11689181	+	39314	Sugb	Dmel_CG7334	NP_001137934.1	588	sugar baby, isoform E
3L	NT_037436.4	11690013	11691333	-	39315	Pallidin	Dmel_CG14133	NP_648494.2	167	pallidin
3L	NT_037436.4	11691694	11692635	+	39316	CG14135	Dmel_CG14135	NP_648495.2	255	uncharacterized protein Dmel_CG14135, isoform B
3L	NT_037436.4	11691694	11692596	+	39316	CG14135	Dmel_CG14135	NP_001261721.1	259	uncharacterized protein Dmel_CG14135, isoform C
3L	NT_037436.4	11694146	11695574	-	39317	CG11652	Dmel_CG11652	NP_648496.1	454	uncharacterized protein Dmel_CG11652, isoform A
3L	NT_037436.4	11694146	11695574	-	39317	CG11652	Dmel_CG11652	NP_729735.1	454	uncharacterized protein Dmel_CG11652, isoform B
3L	NT_037436.4	11694146	11695574	-	39317	CG11652	Dmel_CG11652	NP_001261722.1	454	uncharacterized protein Dmel_CG11652, isoform C
3L	NT_037436.4	11697212	11699226	-	39318	Dnai2	Dmel_CG6053	NP_001261723.1	585	dynein, axonemal, intermediate chain 2, isoform C
3L	NT_037436.4	11697243	11699226	-	39318	Dnai2	Dmel_CG6053	NP_648497.2	576	dynein, axonemal, intermediate chain 2, isoform B
3L	NT_037436.4	11700697	11707411	-	39319	CG11658	Dmel_CG11658	NP_648498.1	351	uncharacterized protein Dmel_CG11658, isoform A
3L	NT_037436.4	11700697	11707411	-	39319	CG11658	Dmel_CG11658	NP_996058.1	351	uncharacterized protein Dmel_CG11658, isoform E
3L	NT_037436.4	11700697	11707411	-	39319	CG11658	Dmel_CG11658	NP_996059.1	351	uncharacterized protein Dmel_CG11658, isoform D
3L	NT_037436.4	11700697	11707411	-	39319	CG11658	Dmel_CG11658	NP_996061.1	351	uncharacterized protein Dmel_CG11658, isoform B
3L	NT_037436.4	11700697	11707411	-	39319	CG11658	Dmel_CG11658	NP_996060.1	351	uncharacterized protein Dmel_CG11658, isoform C
3L	NT_037436.4	11709084	11709347	+	39320	Ccdc56	Dmel_CG42630	NP_996062.3	87	Coiled-coil domain containing 56
3L	NT_037436.4	11709499	11710491	+	39320	Ccdc56	Dmel_CG42630	NP_648499.1	330	mitochondrial transcription factor B1
3L	NT_037436.4	11710674	11711278	-	39321	crim	Dmel_CG6038	NP_648500.1	158	crimpled
3L	NT_037436.4	11712603	11715122	-	50290	CG14132	Dmel_CG14132	NP_001097586.1	118	uncharacterized protein Dmel_CG14132
3L	NT_037436.4	11721125	11722810	+	39322	Bmcp	Dmel_CG7314	NP_729738.1	303	bmcp, isoform A
3L	NT_037436.4	11721125	11722810	+	39322	Bmcp	Dmel_CG7314	NP_648501.1	303	bmcp, isoform B
3L	NT_037436.4	11728417	11731941	+	326196	sunn	Dmel_CG32088	NP_729739.3	952	sisters unbound
3L	NT_037436.4	11732224	11733447	+	39323	CG32087	Dmel_CG32087	NP_729740.2	407	uncharacterized protein Dmel_CG32087
3L	NT_037436.4	11737066	11759896	-	39325	CG6024	Dmel_CG6024	NP_001097587.1	379	CG6024, isoform C
3L	NT_037436.4	11737066	11759896	-	39325	CG6024	Dmel_CG6024	NP_001097589.2	379	CG6024, isoform F
3L	NT_037436.4	11751305	11752474	+	39324	Gr68a	Dmel_CG7303	NP_524027.2	389	gustatory receptor 68a
3L	NT_037436.4	11767540	11772141	-	39326	Muc68D	Dmel_CG6004	NP_648504.2	1514	mucin 68D
3L	NT_037436.4	11774134	11774412	-	39327	Tim13	Dmel_CG11611	NP_648505.1	92	Tim13
3L	NT_037436.4	11775724	11788212	-	39329	Pi3K68D	Dmel_CG11621	NP_729743.1	1876	phosphotidylinositol 3 kinase 68D, isoform C
3L	NT_037436.4	11775724	11788212	-	39329	Pi3K68D	Dmel_CG11621	NP_524028.2	1876	phosphotidylinositol 3 kinase 68D, isoform A
3L	NT_037436.4	11775724	11788212	-	39329	Pi3K68D	Dmel_CG11621	NP_001163420.1	1876	phosphotidylinositol 3 kinase 68D, isoform D
3L	NT_037436.4	11777222	11780310	+	39328	CG14131	Dmel_CG14131	NP_001261725.1	734	uncharacterized protein Dmel_CG14131, isoform B
3L	NT_037436.4	11777222	11780310	+	39328	CG14131	Dmel_CG14131	NP_648506.1	735	uncharacterized protein Dmel_CG14131, isoform A
3L	NT_037436.4	11786626	11788212	-	39329	Pi3K68D	Dmel_CG11621	NP_001261724.1	366	phosphotidylinositol 3 kinase 68D, isoform E
3L	NT_037436.4	11786626	11788212	-	39329	Pi3K68D	Dmel_CG11621	NP_729745.1	366	phosphotidylinositol 3 kinase 68D, isoform B
3L	NT_037436.4	11790278	11793129	-	39330	CG5964	Dmel_CG5964	NP_648507.1	928	CG5964
3L	NT_037436.4	11793587	11795390	+	39331	CG10907	Dmel_CG10907	NP_648508.1	502	uncharacterized protein Dmel_CG10907
3L	NT_037436.4	11795957	11798416	+	39332	Klp68D	Dmel_CG7293	NP_001261726.1	784	Kinesin-like protein at 68D, isoform B
3L	NT_037436.4	11795957	11798416	+	39332	Klp68D	Dmel_CG7293	NP_524029.2	784	Kinesin-like protein at 68D, isoform A
3L	NT_037436.4	11799019	11800755	-	39333	CG10361	Dmel_CG10361	NP_648509.1	417	uncharacterized protein Dmel_CG10361
3L	NT_037436.4	11802085	11814533	-	39334	CG42255	Dmel_CG42255	NP_729748.3	3613	uncharacterized protein Dmel_CG42255
3L	NT_037436.4	11815500	11816467	+	39335	CG14130	Dmel_CG14130	NP_648511.2	255	uncharacterized protein Dmel_CG14130
3L	NT_037436.4	11817144	11821857	-	39336	CG5946	Dmel_CG5946	NP_001163422.1	316	CG5946, isoform F
3L	NT_037436.4	11817144	11821857	-	39336	CG5946	Dmel_CG5946	NP_648512.2	316	CG5946, isoform B
3L	NT_037436.4	11817144	11819835	-	39336	CG5946	Dmel_CG5946	NP_729751.1	313	CG5946, isoform A
3L	NT_037436.4	11817480	11819835	-	39336	CG5946	Dmel_CG5946	NP_001036601.1	313	CG5946, isoform C
3L	NT_037436.4	11817480	11821857	-	39336	CG5946	Dmel_CG5946	NP_001036600.1	316	CG5946, isoform D
3L	NT_037436.4	11817480	11821857	-	39336	CG5946	Dmel_CG5946	NP_001287035.1	330	CG5946, isoform G
3L	NT_037436.4	11818074	11821857	-	39336	CG5946	Dmel_CG5946	NP_001163421.1	263	CG5946, isoform E
3L	NT_037436.4	11820479	11821432	-	39337	CG11597	Dmel_CG11597	NP_001163423.1	317	uncharacterized protein Dmel_CG11597, isoform C
3L	NT_037436.4	11820479	11821432	-	39337	CG11597	Dmel_CG11597	NP_001036602.1	317	uncharacterized protein Dmel_CG11597, isoform B
3L	NT_037436.4	11820479	11821432	-	39337	CG11597	Dmel_CG11597	NP_648513.3	317	uncharacterized protein Dmel_CG11597, isoform A
3L	NT_037436.4	11822886	11823368	+	39338	RpL10Ab	Dmel_CG7283	NP_729753.1	57	ribosomal protein L10Ab, isoform F
3L	NT_037436.4	11822886	11824150	+	39338	RpL10Ab	Dmel_CG7283	NP_648514.1	217	ribosomal protein L10Ab, isoform A
3L	NT_037436.4	11824297	11825586	-	317849	CG32095	Dmel_CG32095	NP_729755.1	429	uncharacterized protein Dmel_CG32095
3L	NT_037436.4	11827652	11833068	-	39340	CycA	Dmel_CG5940	NP_524030.2	491	cyclin A, isoform A
3L	NT_037436.4	11827652	11833068	-	39340	CycA	Dmel_CG5940	NP_001246724.1	490	cyclin A, isoform C
3L	NT_037436.4	11829435	11830636	+	39339	CG7264	Dmel_CG7264	NP_001261727.1	381	CG7264, isoform B
3L	NT_037436.4	11829435	11830636	+	39339	CG7264	Dmel_CG7264	NP_648515.1	381	CG7264, isoform A
3L	NT_037436.4	11835247	11836692	-	12798207	CG43064	Dmel_CG43064	NP_001287036.1	481	uncharacterized protein Dmel_CG43064, isoform B
3L	NT_037436.4	11835247	11836692	-	12798207	CG43064	Dmel_CG43064	NP_001246726.1	481	uncharacterized protein Dmel_CG43064, isoform A
3L	NT_037436.4	11847514	11847714	-	50289	CG12521	Dmel_CG12521	NP_652433.1	66	uncharacterized protein Dmel_CG12521
3L	NT_037436.4	11851511	11863162	-	5740513	CG44837	Dmel_CG44837	NP_648516.2	866	uncharacterized protein Dmel_CG44837, isoform D
3L	NT_037436.4	11851706	11863162	-	5740513	CG44837	Dmel_CG44837	NP_001097590.1	801	uncharacterized protein Dmel_CG44837, isoform C
3L	NT_037436.4	11851706	11938340	-	5740513	CG44837	Dmel_CG44837	NP_001287037.1	964	uncharacterized protein Dmel_CG44837, isoform B
3L	NT_037436.4	11870647	11871237	-	39343	CG5906	Dmel_CG5906	NP_648518.1	196	CG5906
3L	NT_037436.4	11879221	11881017	+	39344	Sprn	Dmel_CG14128	NP_001163426.1	561	spermitin, isoform E
3L	NT_037436.4	11879221	11881017	+	39344	Sprn	Dmel_CG14128	NP_648519.2	562	spermitin, isoform B
3L	NT_037436.4	11879221	11881017	+	39344	Sprn	Dmel_CG14128	NP_001163425.2	579	spermitin, isoform F
3L	NT_037436.4	11879221	11881017	+	39344	Sprn	Dmel_CG14128	NP_001163424.1	544	spermitin, isoform C
3L	NT_037436.4	11881384	11883546	+	39345	CCDC151	Dmel_CG14127	NP_648520.1	614	Coiled-coil domain containing protein 151
3L	NT_037436.4	11887885	11888844	-	39346	CG5897	Dmel_CG5897	NP_001163427.1	319	CG5897
3L	NT_037436.4	11921616	11922428	+	39347	CG11588	Dmel_CG11588	NP_648522.1	270	uncharacterized protein Dmel_CG11588, isoform A
3L	NT_037436.4	11921616	11922428	+	39347	CG11588	Dmel_CG11588	NP_001261729.1	270	uncharacterized protein Dmel_CG11588, isoform B
3L	NT_037436.4	11922736	11924691	-	39348	SdhAL	Dmel_CG5718	NP_648523.1	651	succinate dehydrogenase, subunit A (flavoprotein)-like
3L	NT_037436.4	11932006	11935405	+	39349	byn	Dmel_CG7260	NP_001261730.1	599	brachyenteron, isoform C
3L	NT_037436.4	11932006	11935731	+	39349	byn	Dmel_CG7260	NP_524031.2	697	brachyenteron, isoform B
3L	NT_037436.4	11942104	11943372	+	39351	Rpt4R	Dmel_CG7257	NP_648525.1	398	regulatory particle triple-A ATPase 4-related, isoform A
3L	NT_037436.4	11942104	11943372	+	39351	Rpt4R	Dmel_CG7257	NP_001287039.1	398	regulatory particle triple-A ATPase 4-related, isoform B
3L	NT_037436.4	11943716	11944802	-	39352	CG5883	Dmel_CG5883	NP_648526.2	339	CG5883
3L	NT_037436.4	11947722	11949206	+	39353	CG7252	Dmel_CG7252	NP_648527.1	474	CG7252
3L	NT_037436.4	11949873	11952186	+	39354	CG17826	Dmel_CG17826	NP_648528.1	751	uncharacterized protein Dmel_CG17826
3L	NT_037436.4	11952399	11953293	-	39355	obst-G	Dmel_CG9781	NP_648529.1	279	obstructor-G
3L	NT_037436.4	11954245	11956722	+	39356	CG7248	Dmel_CG7248	NP_648530.1	796	CG7248
3L	NT_037436.4	11956814	11957458	-	39357	CG11570	Dmel_CG11570	NP_001246727.1	214	uncharacterized protein Dmel_CG11570, isoform B
3L	NT_037436.4	11956814	11957458	-	39357	CG11570	Dmel_CG11570	NP_648531.1	214	uncharacterized protein Dmel_CG11570, isoform A
3L	NT_037436.4	11958429	11958803	+	12798218	CG43294	Dmel_CG43294	NP_001246729.1	124	uncharacterized protein Dmel_CG43294, isoform B
3L	NT_037436.4	11958429	11958803	+	12798218	CG43294	Dmel_CG43294	NP_001246728.1	124	uncharacterized protein Dmel_CG43294, isoform A
3L	NT_037436.4	11959122	11965177	-	43930	prc	Dmel_CG5700	NP_524658.2	1713	pericardin
3L	NT_037436.4	11967580	11972979	-	2768990	Muc68E	Dmel_CG33265	NP_996064.1	1799	mucin 68E
3L	NT_037436.4	11973163	11973754	-	8673976	CG42397	Dmel_CG42397	NP_001163428.1	178	uncharacterized protein Dmel_CG42397
3L	NT_037436.4	11974922	11975759	+	39359	CG14125	Dmel_CG14125	NP_648532.1	256	uncharacterized protein Dmel_CG14125, isoform A
3L	NT_037436.4	11974922	11975759	+	39359	CG14125	Dmel_CG14125	NP_001261731.1	263	uncharacterized protein Dmel_CG14125, isoform B
3L	NT_037436.4	11976164	11980747	+	39360	CG43896	Dmel_CG43896	NP_648533.3	1324	uncharacterized protein Dmel_CG43896, isoform B
3L	NT_037436.4	11976164	11983542	+	39360	CG43896	Dmel_CG43896	NP_001261732.1	2113	uncharacterized protein Dmel_CG43896, isoform C
3L	NT_037436.4	11976164	11983542	+	39360	CG43896	Dmel_CG43896	NP_001287040.1	2113	uncharacterized protein Dmel_CG43896, isoform D
3L	NT_037436.4	11985974	11990392	+	39362	CG6938	Dmel_CG6938	NP_001261733.1	1245	CG6938, isoform C
3L	NT_037436.4	11985974	11990344	+	39362	CG6938	Dmel_CG6938	NP_648535.2	1229	CG6938, isoform B
3L	NT_037436.4	11990783	11991845	+	39363	CG6931	Dmel_CG6931	NP_648536.1	290	CG6931
3L	NT_037436.4	11992153	11993044	-	39364	viaf	Dmel_CG18593	NP_524032.2	240	viral IAP-associated factor
3L	NT_037436.4	11993753	11998050	-	39365	Grip163	Dmel_CG5688	NP_648537.2	1351	Grip163
3L	NT_037436.4	11998871	12002594	-	39366	Pop2	Dmel_CG5684	NP_648538.1	297	Pop2, isoform A
3L	NT_037436.4	11998871	12001087	-	39366	Pop2	Dmel_CG5684	NP_729776.1	293	Pop2, isoform C
3L	NT_037436.4	11998871	12001087	-	39366	Pop2	Dmel_CG5684	NP_729775.1	293	Pop2, isoform B
3L	NT_037436.4	11999955	12001087	-	39366	Pop2	Dmel_CG5684	NP_001163429.1	357	Pop2, isoform D
3L	NT_037436.4	11999955	12002594	-	39366	Pop2	Dmel_CG5684	NP_001287041.1	361	Pop2, isoform E
3L	NT_037436.4	12005265	12007510	+	39367	CG6928	Dmel_CG6928	NP_001261734.1	579	CG6928, isoform C
3L	NT_037436.4	12005265	12007731	+	39367	CG6928	Dmel_CG6928	NP_729777.1	612	CG6928, isoform A
3L	NT_037436.4	12005265	12007510	+	39367	CG6928	Dmel_CG6928	NP_001261735.1	579	CG6928, isoform D
3L	NT_037436.4	12005265	12007731	+	39367	CG6928	Dmel_CG6928	NP_648539.1	612	CG6928, isoform B
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_729779.1	1569	rolling pebbles, isoform A
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_001261736.1	1669	rolling pebbles, isoform F
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_001261738.1	1568	rolling pebbles, isoform H
3L	NT_037436.4	12008498	12061908	-	39368	rols	Dmel_CG32096	NP_001261737.1	1799	rolling pebbles, isoform G
3L	NT_037436.4	12008498	12061908	-	39368	rols	Dmel_CG32096	NP_729778.1	1900	rolling pebbles, isoform B
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_648542.1	1569	rolling pebbles, isoform D
3L	NT_037436.4	12008498	12061908	-	39368	rols	Dmel_CG32096	NP_001261739.1	1798	rolling pebbles, isoform I
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_729780.1	1670	rolling pebbles, isoform C
3L	NT_037436.4	12008498	12055431	-	39368	rols	Dmel_CG32096	NP_729781.1	1670	rolling pebbles, isoform E
3L	NT_037436.4	12032570	12032868	+	14462850	CG43993	Dmel_CG43993	NP_001261740.1	81	uncharacterized protein Dmel_CG43993
3L	NT_037436.4	12042410	12044165	+	39369	CG6793	Dmel_CG6793	NP_648541.1	564	CG6793
3L	NT_037436.4	12044713	12045081	+	14462851	CG43638	Dmel_CG43638	NP_001261741.1	122	uncharacterized protein Dmel_CG43638
3L	NT_037436.4	12068135	12081351	-	37066	Sema5c	Dmel_CG5661	NP_611293.3	1093	semaphorin 5c, isoform A
3L	NT_037436.4	12068135	12080957	-	37066	Sema5c	Dmel_CG5661	NP_001163430.1	1091	semaphorin 5c, isoform B
3L	NT_037436.4	12088704	12089072	+	39373	CG17154	Dmel_CG17154	NP_648544.2	122	uncharacterized protein Dmel_CG17154
3L	NT_037436.4	12116232	12117849	+	39374	l(3)j2D3	Dmel_CG6801	NP_648545.1	391	lethal (3) j2D3
3L	NT_037436.4	12118315	12119542	+	39375	ssp	Dmel_CG17153	NP_648546.1	368	sunspot
3L	NT_037436.4	12120082	12121059	+	39376	CG11560	Dmel_CG11560	NP_648547.3	303	uncharacterized protein Dmel_CG11560, isoform A
3L	NT_037436.4	12120082	12121059	+	39376	CG11560	Dmel_CG11560	NP_001303392.1	307	uncharacterized protein Dmel_CG11560, isoform B
3L	NT_037436.4	12122107	12124886	-	39377	yps	Dmel_CG5654	NP_524033.2	352	ypsilon schachtel, isoform A
3L	NT_037436.4	12122664	12124886	-	39377	yps	Dmel_CG5654	NP_001246730.1	340	ypsilon schachtel, isoform B
3L	NT_037436.4	12125487	12127394	-	39378	Ir68b	Dmel_CG17152	NP_648548.1	635	ionotropic receptor 68b
3L	NT_037436.4	12128099	12128403	+	5740575	CG34241	Dmel_CG34241	NP_001097591.1	82	uncharacterized protein Dmel_CG34241
3L	NT_037436.4	12129410	12131515	+	45326	Lsp2	Dmel_CG6806	NP_524816.1	701	larval serum protein 2, isoform A
3L	NT_037436.4	12129410	12131515	+	45326	Lsp2	Dmel_CG6806	NP_001287042.1	701	larval serum protein 2, isoform B
3L	NT_037436.4	12132223	12133753	+	39381	CG11534	Dmel_CG11534	NP_648549.1	492	uncharacterized protein Dmel_CG11534
3L	NT_037436.4	12133876	12136634	-	39382	CG5645	Dmel_CG5645	NP_648550.1	855	CG5645
3L	NT_037436.4	12137016	12137475	+	39383	Atg12	Dmel_CG10861	NP_648551.3	111	Autophagy-related 12
3L	NT_037436.4	12137640	12138401	-	46260	ND-SGDH	Dmel_CG9762	NP_001261742.1	186	NADH dehydrogenase (ubiquinone) SGDH subunit, isoform B
3L	NT_037436.4	12137640	12138401	-	46260	ND-SGDH	Dmel_CG9762	NP_652042.1	186	NADH dehydrogenase (ubiquinone) SGDH subunit, isoform A
3L	NT_037436.4	12140092	12142828	+	39385	RhoGAP68F	Dmel_CG6811	NP_001261745.1	475	Rho GTPase activating protein at 68F, isoform E
3L	NT_037436.4	12140092	12142828	+	39385	RhoGAP68F	Dmel_CG6811	NP_001261744.1	476	Rho GTPase activating protein at 68F, isoform D
3L	NT_037436.4	12140092	12142828	+	39385	RhoGAP68F	Dmel_CG6811	NP_648552.1	476	Rho GTPase activating protein at 68F, isoform A
3L	NT_037436.4	12141449	12142828	+	39385	RhoGAP68F	Dmel_CG6811	NP_001261743.1	419	Rho GTPase activating protein at 68F, isoform C
3L	NT_037436.4	12143551	12145988	-	39386	CG5642	Dmel_CG5642	NP_648553.1	539	CG5642
3L	NT_037436.4	12146855	12156241	+	39387	Nrx-IV	Dmel_CG6827	NP_729787.2	1284	neurexin IV, isoform B
3L	NT_037436.4	12146855	12156241	+	39387	Nrx-IV	Dmel_CG6827	NP_524034.2	1284	neurexin IV, isoform A
3L	NT_037436.4	12149367	12150239	+	317852	CG32099	Dmel_CG32099	NP_729788.1	290	uncharacterized protein Dmel_CG32099
3L	NT_037436.4	12157839	12159582	-	39388	CG9760	Dmel_CG9760	NP_001261746.1	304	CG9760, isoform D
3L	NT_037436.4	12157959	12159582	-	39388	CG9760	Dmel_CG9760	NP_648554.3	264	CG9760, isoform C
3L	NT_037436.4	12165982	12168374	-	39389	Rh7	Dmel_CG5638	NP_524035.2	483	rhodopsin 7
3L	NT_037436.4	12180098	12182747	+	39390	CAH2	Dmel_CG6906	NP_648555.1	335	carbonic anhydrase 2, isoform A
3L	NT_037436.4	12181864	12182747	+	39390	CAH2	Dmel_CG6906	NP_001261747.1	253	carbonic anhydrase 2, isoform B
3L	NT_037436.4	12186040	12187281	+	39391	CG6910	Dmel_CG6910	NP_648556.3	292	CG6910, isoform B
3L	NT_037436.4	12186156	12187281	+	39391	CG6910	Dmel_CG6910	NP_001261748.1	275	CG6910, isoform C
3L	NT_037436.4	12188859	12190544	+	39392	Est-6	Dmel_CG6917	NP_788500.1	544	esterase 6, isoform A
3L	NT_037436.4	12188859	12190544	+	39392	Est-6	Dmel_CG6917	NP_001261749.1	544	esterase 6, isoform B
3L	NT_037436.4	12190738	12192428	+	39393	Est-P	Dmel_CG17148	NP_788501.1	544	esterase P
3L	NT_037436.4	12192496	12193603	-	39394	thoc6	Dmel_CG5632	NP_648557.1	350	thoc6, isoform A
3L	NT_037436.4	12192496	12193603	-	39394	thoc6	Dmel_CG5632	NP_001261750.1	350	thoc6, isoform B
3L	NT_037436.4	12192496	12193603	-	39394	thoc6	Dmel_CG5632	NP_001303370.1	350	thoc6, isoform C
3L	NT_037436.4	12197907	12198770	+	39395	CG11529	Dmel_CG11529	NP_648558.1	287	uncharacterized protein Dmel_CG11529
3L	NT_037436.4	12200537	12203721	-	39396	Adk1	Dmel_CG17146	NP_729792.1	229	adenylate kinase 1, isoform B
3L	NT_037436.4	12200537	12203721	-	39396	Adk1	Dmel_CG17146	NP_524038.1	201	adenylate kinase 1, isoform A
3L	NT_037436.4	12204681	12206005	-	39397	CG5626	Dmel_CG5626	NP_648559.1	383	CG5626
3L	NT_037436.4	12207102	12220168	-	39399	app	Dmel_CG42318	NP_001137936.1	693	approximated, isoform L
3L	NT_037436.4	12207102	12213871	-	39399	app	Dmel_CG42318	NP_001246733.2	476	approximated, isoform S
3L	NT_037436.4	12207102	12220168	-	39399	app	Dmel_CG42318	NP_001246731.2	693	approximated, isoform R
3L	NT_037436.4	12207102	12220168	-	39399	app	Dmel_CG42318	NP_001137937.1	693	approximated, isoform M
3L	NT_037436.4	12207102	12220168	-	39399	app	Dmel_CG42318	NP_001287043.1	693	approximated, isoform T
3L	NT_037436.4	12207920	12220168	-	39399	app	Dmel_CG42318	NP_001246732.1	382	approximated, isoform O
3L	NT_037436.4	12211631	12220168	-	39399	app	Dmel_CG42318	NP_996065.2	755	approximated, isoform J
3L	NT_037436.4	12211631	12220168	-	39399	app	Dmel_CG42318	NP_648561.2	755	approximated, isoform K
3L	NT_037436.4	12213027	12220168	-	39399	app	Dmel_CG42318	NP_001137939.2	398	approximated, isoform I
3L	NT_037436.4	12213027	12220168	-	39399	app	Dmel_CG42318	NP_001137938.2	398	approximated, isoform H
3L	NT_037436.4	12267630	12269200	+	39400	CG32100	Dmel_CG32100	NP_729797.1	487	uncharacterized protein Dmel_CG32100
3L	NT_037436.4	12270292	12271275	-	39402	Pbgs	Dmel_CG10335	NP_648564.1	327	porphobilinogen synthase, isoform A
3L	NT_037436.4	12270292	12271275	-	39402	Pbgs	Dmel_CG10335	NP_001261752.1	327	porphobilinogen synthase, isoform B
3L	NT_037436.4	12272185	12277174	-	39403	CG4300	Dmel_CG4300	NP_001287045.1	458	CG4300, isoform D
3L	NT_037436.4	12272185	12277174	-	39403	CG4300	Dmel_CG4300	NP_001287044.1	457	CG4300, isoform C
3L	NT_037436.4	12272458	12277174	-	39403	CG4300	Dmel_CG4300	NP_648565.1	366	CG4300, isoform B
3L	NT_037436.4	12272458	12277174	-	39403	CG4300	Dmel_CG4300	NP_729798.1	367	CG4300, isoform A
3L	NT_037436.4	12278660	12281033	+	39404	INPP5E	Dmel_CG10426	NP_001261753.1	747	inositol polyphosphate 5-phosphatase E, isoform B
3L	NT_037436.4	12278660	12281033	+	39404	INPP5E	Dmel_CG10426	NP_648566.1	747	inositol polyphosphate 5-phosphatase E, isoform A
3L	NT_037436.4	12291036	12295870	-	39405	CG4328	Dmel_CG4328	NP_648567.2	544	CG4328
3L	NT_037436.4	12311047	12311217	+	19835366	CG44355	Dmel_CG44355	NP_001287046.1	56	uncharacterized protein Dmel_CG44355
3L	NT_037436.4	12329470	12335419	+	39406	Lmx1a	Dmel_CG32105	NP_729801.1	640	LIM homeobox transcription factor 1 alpha, isoform B
3L	NT_037436.4	12329470	12335419	+	39406	Lmx1a	Dmel_CG32105	NP_001261754.1	639	LIM homeobox transcription factor 1 alpha, isoform C
3L	NT_037436.4	12336715	12337126	+	39408	CG10418	Dmel_CG10418	NP_648570.1	95	uncharacterized protein Dmel_CG10418
3L	NT_037436.4	12339884	12347967	-	39409	CrzR	Dmel_CG10698	NP_001261755.1	644	corazonin receptor, isoform B
3L	NT_037436.4	12340079	12347967	-	39409	CrzR	Dmel_CG10698	NP_648571.1	579	corazonin receptor, isoform A
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_648572.1	1171	sodium chloride cotransporter 69, isoform A
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_996066.1	1171	sodium chloride cotransporter 69, isoform G
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_001261758.1	1207	sodium chloride cotransporter 69, isoform E
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_001261757.1	1191	sodium chloride cotransporter 69, isoform D
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_001261756.1	1191	sodium chloride cotransporter 69, isoform C
3L	NT_037436.4	12368713	12379413	-	39410	Ncc69	Dmel_CG4357	NP_001261759.1	1191	sodium chloride cotransporter 69, isoform F
3L	NT_037436.4	12393869	12399267	-	39413	CG32104	Dmel_CG32104	NP_648573.2	1215	uncharacterized protein Dmel_CG32104
3L	NT_037436.4	12396206	12396893	+	39411	Obp69a	Dmel_CG10436	NP_524039.2	148	Odorant-binding protein 69a
3L	NT_037436.4	12399597	12401820	-	39414	Smyd4-2	Dmel_CG14122	NP_648574.1	663	SET and MYND domain containing, class 4, member 2
3L	NT_037436.4	12404055	12405417	-	39415	CG32103	Dmel_CG32103	NP_001261760.1	350	uncharacterized protein Dmel_CG32103, isoform D
3L	NT_037436.4	12404055	12408232	-	39415	CG32103	Dmel_CG32103	NP_729803.1	363	uncharacterized protein Dmel_CG32103, isoform C
3L	NT_037436.4	12404055	12413903	-	39415	CG32103	Dmel_CG32103	NP_996067.1	583	uncharacterized protein Dmel_CG32103, isoform E
3L	NT_037436.4	12404055	12413903	-	39415	CG32103	Dmel_CG32103	NP_729802.1	583	uncharacterized protein Dmel_CG32103, isoform B
3L	NT_037436.4	12415336	12417212	-	39417	ArfGAP1	Dmel_CG4237	NP_001261761.1	448	ADP-ribosylation factor GTPase activating protein 1, isoform B
3L	NT_037436.4	12415336	12417212	-	39417	ArfGAP1	Dmel_CG4237	NP_524040.2	468	ADP-ribosylation factor GTPase activating protein 1, isoform A
3L	NT_037436.4	12422632	12432313	-	39418	toe	Dmel_CG10704	NP_524041.2	640	twin of eyg, isoform A
3L	NT_037436.4	12422885	12432313	-	39418	toe	Dmel_CG10704	NP_001261762.1	550	twin of eyg, isoform B
3L	NT_037436.4	12463269	12467618	-	39419	eyg	Dmel_CG10488	NP_001014582.1	670	eyegone, isoform B
3L	NT_037436.4	12463269	12467618	-	39419	eyg	Dmel_CG10488	NP_001287047.1	670	eyegone, isoform C
3L	NT_037436.4	12463269	12467618	-	39419	eyg	Dmel_CG10488	NP_524042.2	670	eyegone, isoform A
3L	NT_037436.4	12469157	12469423	-	317854	CG32102	Dmel_CG32102	NP_729804.1	88	uncharacterized protein Dmel_CG32102
3L	NT_037436.4	12471837	12474178	+	39420	CG10616	Dmel_CG10616	NP_001246734.1	508	uncharacterized protein Dmel_CG10616, isoform B
3L	NT_037436.4	12471837	12474178	+	39420	CG10616	Dmel_CG10616	NP_648576.1	492	uncharacterized protein Dmel_CG10616, isoform A
3L	NT_037436.4	12471837	12474178	+	39420	CG10616	Dmel_CG10616	NP_001287048.1	492	uncharacterized protein Dmel_CG10616, isoform C
3L	NT_037436.4	12475007	12479774	-	39421	CG10663	Dmel_CG10663	NP_001097592.1	748	uncharacterized protein Dmel_CG10663, isoform B
3L	NT_037436.4	12475007	12479774	-	39421	CG10663	Dmel_CG10663	NP_001097593.2	748	uncharacterized protein Dmel_CG10663, isoform D
3L	NT_037436.4	12482609	12486356	+	3772600	CG33725	Dmel_CG33725	NP_001287049.1	175	uncharacterized protein Dmel_CG33725, isoform C
3L	NT_037436.4	12485690	12486356	+	3772600	CG33725	Dmel_CG33725	NP_001027125.1	181	uncharacterized protein Dmel_CG33725, isoform A
3L	NT_037436.4	12486812	12489974	-	39422	CG10660	Dmel_CG10660	NP_001261764.1	487	uncharacterized protein Dmel_CG10660, isoform C
3L	NT_037436.4	12486812	12489974	-	39422	CG10660	Dmel_CG10660	NP_001261763.1	480	uncharacterized protein Dmel_CG10660, isoform B
3L	NT_037436.4	12486812	12489974	-	39422	CG10660	Dmel_CG10660	NP_648578.1	487	uncharacterized protein Dmel_CG10660, isoform A
3L	NT_037436.4	12486812	12489974	-	39422	CG10660	Dmel_CG10660	NP_001261765.1	480	uncharacterized protein Dmel_CG10660, isoform D
3L	NT_037436.4	12492143	12497010	-	39423	CG10657	Dmel_CG10657	NP_648579.3	334	uncharacterized protein Dmel_CG10657
3L	NT_037436.4	12498490	12501236	-	39424	CG10638	Dmel_CG10638	NP_001287050.1	317	uncharacterized protein Dmel_CG10638, isoform D
3L	NT_037436.4	12498490	12501236	-	39424	CG10638	Dmel_CG10638	NP_729808.1	317	uncharacterized protein Dmel_CG10638, isoform A
3L	NT_037436.4	12499973	12501236	-	39424	CG10638	Dmel_CG10638	NP_996068.1	310	uncharacterized protein Dmel_CG10638, isoform B
3L	NT_037436.4	12501781	12502475	+	39425	CG10681	Dmel_CG10681	NP_648580.1	212	uncharacterized protein Dmel_CG10681, isoform A
3L	NT_037436.4	12501781	12502475	+	39425	CG10681	Dmel_CG10681	NP_001261766.1	212	uncharacterized protein Dmel_CG10681, isoform B
3L	NT_037436.4	12502625	12503827	-	39426	CG10646	Dmel_CG10646	NP_648581.1	383	uncharacterized protein Dmel_CG10646
3L	NT_037436.4	12504546	12505148	+	44118	vih	Dmel_CG10682	NP_648582.1	178	vihar
3L	NT_037436.4	12505810	12507710	-	39428	CG10654	Dmel_CG10654	NP_001261767.1	412	uncharacterized protein Dmel_CG10654, isoform B
3L	NT_037436.4	12505810	12507710	-	39428	CG10654	Dmel_CG10654	NP_648583.2	386	uncharacterized protein Dmel_CG10654, isoform A
3L	NT_037436.4	12508357	12514667	-	39429	sti	Dmel_CG10522	NP_001261768.1	1858	sticky, isoform B
3L	NT_037436.4	12508357	12514667	-	39429	sti	Dmel_CG10522	NP_648584.1	1854	sticky, isoform A
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261773.1	653	trailer hitch, isoform F
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261776.1	647	trailer hitch, isoform I
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_648585.3	652	trailer hitch, isoform A
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261772.1	642	trailer hitch, isoform E
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261775.1	657	trailer hitch, isoform H
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261774.1	643	trailer hitch, isoform G
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261769.1	652	trailer hitch, isoform B
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261771.1	646	trailer hitch, isoform D
3L	NT_037436.4	12515452	12519151	+	39430	tral	Dmel_CG10686	NP_001261770.1	656	trailer hitch, isoform C
3L	NT_037436.4	12521346	12523903	-	39431	Gcn5	Dmel_CG4107	NP_648586.2	813	Gcn5 acetyltransferase
3L	NT_037436.4	12524441	12525085	+	39432	ver	Dmel_CG14121	NP_001261777.1	214	verrocchio, isoform B
3L	NT_037436.4	12524441	12525085	+	39432	ver	Dmel_CG14121	NP_648587.1	214	verrocchio, isoform A
3L	NT_037436.4	12525154	12526603	-	39433	eIF-2beta	Dmel_CG4153	NP_524043.1	312	eukaryotic initiation factor 2beta
3L	NT_037436.4	12527631	12530035	-	39434	nst	Dmel_CG10627	NP_648588.1	549	nesthocker
3L	NT_037436.4	12530748	12533612	-	39435	Tsf2	Dmel_CG10620	NP_524044.1	819	transferrin 2
3L	NT_037436.4	12534067	12534243	+	5740417	CG34242	Dmel_CG34242	NP_001097595.1	58	uncharacterized protein Dmel_CG34242, isoform A
3L	NT_037436.4	12534067	12534243	+	5740417	CG34242	Dmel_CG34242	NP_001137940.1	58	uncharacterized protein Dmel_CG34242, isoform B
3L	NT_037436.4	12534655	12535419	+	39436	Pmm2	Dmel_CG10688	NP_648589.1	254	phosphomannomutase type 2
3L	NT_037436.4	12535512	12537222	-	39437	CG4069	Dmel_CG4069	NP_648590.1	509	CG4069
3L	NT_037436.4	12537815	12572438	-	39438	sowah	Dmel_CG10632	NP_729816.4	635	sosondowah, isoform I
3L	NT_037436.4	12537815	12572438	-	39438	sowah	Dmel_CG10632	NP_001137943.2	780	sosondowah, isoform G
3L	NT_037436.4	12538185	12572438	-	39438	sowah	Dmel_CG10632	NP_001137941.2	527	sosondowah, isoform H
3L	NT_037436.4	12539617	12572438	-	39438	sowah	Dmel_CG10632	NP_001137942.2	548	sosondowah, isoform J
3L	NT_037436.4	12581103	12595661	+	39439	ara	Dmel_CG10571	NP_001163432.1	709	araucan, isoform B
3L	NT_037436.4	12581103	12595661	+	39439	ara	Dmel_CG10571	NP_524045.2	717	araucan, isoform A
3L	NT_037436.4	12610769	12620701	+	39440	caup	Dmel_CG10605	NP_524046.2	693	caupolican
3L	NT_037436.4	12694312	12708956	+	39441	mirr	Dmel_CG10601	NP_729818.1	641	mirror, isoform B
3L	NT_037436.4	12694312	12709079	+	39441	mirr	Dmel_CG10601	NP_001261778.1	682	mirror, isoform C
3L	NT_037436.4	12694312	12708956	+	39441	mirr	Dmel_CG10601	NP_524047.2	641	mirror, isoform A
3L	NT_037436.4	12733623	12734516	-	44668	SmD1	Dmel_CG10753	NP_524774.1	124	small ribonucleoprotein particle protein SmD1
3L	NT_037436.4	12735153	12740997	+	39443	Ptp69D	Dmel_CG10975	NP_524048.2	1462	protein tyrosine phosphatase 69D, isoform A
3L	NT_037436.4	12735153	12740997	+	39443	Ptp69D	Dmel_CG10975	NP_788502.1	1461	protein tyrosine phosphatase 69D, isoform B
3L	NT_037436.4	12741861	12744932	+	317860	CG32112	Dmel_CG32112	NP_001261779.1	510	uncharacterized protein Dmel_CG32112, isoform E
3L	NT_037436.4	12741861	12744932	+	317860	CG32112	Dmel_CG32112	NP_729820.2	510	uncharacterized protein Dmel_CG32112, isoform B
3L	NT_037436.4	12743041	12744932	+	317860	CG32112	Dmel_CG32112	NP_729819.3	435	uncharacterized protein Dmel_CG32112, isoform D
3L	NT_037436.4	12743041	12744932	+	317860	CG32112	Dmel_CG32112	NP_729821.1	435	uncharacterized protein Dmel_CG32112, isoform C
3L	NT_037436.4	12745408	12746478	+	39444	CG32109	Dmel_CG32109	NP_729822.1	231	uncharacterized protein Dmel_CG32109
3L	NT_037436.4	12746813	12748657	-	39445	Klc	Dmel_CG5433	NP_001261780.1	508	kinesin light chain, isoform B
3L	NT_037436.4	12746813	12748657	-	39445	Klc	Dmel_CG5433	NP_001261781.1	507	kinesin light chain, isoform C
3L	NT_037436.4	12746813	12748657	-	39445	Klc	Dmel_CG5433	NP_524049.1	508	kinesin light chain, isoform A
3L	NT_037436.4	12750607	12753157	+	39446	CG10984	Dmel_CG10984	NP_001261782.1	640	uncharacterized protein Dmel_CG10984, isoform D
3L	NT_037436.4	12750607	12753157	+	39446	CG10984	Dmel_CG10984	NP_648593.3	640	uncharacterized protein Dmel_CG10984, isoform A
3L	NT_037436.4	12750607	12753157	+	39446	CG10984	Dmel_CG10984	NP_729824.2	640	uncharacterized protein Dmel_CG10984, isoform C
3L	NT_037436.4	12750607	12753157	+	39446	CG10984	Dmel_CG10984	NP_729823.2	658	uncharacterized protein Dmel_CG10984, isoform B
3L	NT_037436.4	12753294	12754718	-	39447	CG10973	Dmel_CG10973	NP_001034002.1	306	uncharacterized protein Dmel_CG10973
3L	NT_037436.4	12755146	12768561	+	39448	CG32113	Dmel_CG32113	NP_729825.2	3919	uncharacterized protein Dmel_CG32113
3L	NT_037436.4	12768887	12772508	-	39450	Hip1	Dmel_CG10971	NP_729827.1	1087	huntingtin interacting protein 1, isoform B
3L	NT_037436.4	12768887	12773310	-	39450	Hip1	Dmel_CG10971	NP_648597.2	1124	huntingtin interacting protein 1, isoform A
3L	NT_037436.4	12773997	12778459	-	317855	CG32106	Dmel_CG32106	NP_001246736.1	1397	uncharacterized protein Dmel_CG32106, isoform D
3L	NT_037436.4	12773997	12778459	-	317855	CG32106	Dmel_CG32106	NP_729828.2	1413	uncharacterized protein Dmel_CG32106, isoform E
3L	NT_037436.4	12778928	12781021	-	39451	CG10969	Dmel_CG10969	NP_648598.1	697	uncharacterized protein Dmel_CG10969
3L	NT_037436.4	12781462	12784309	+	39452	CG17666	Dmel_CG17666	NP_648599.1	872	uncharacterized protein Dmel_CG17666, isoform A
3L	NT_037436.4	12783440	12784309	+	39452	CG17666	Dmel_CG17666	NP_729831.1	271	uncharacterized protein Dmel_CG17666, isoform B
3L	NT_037436.4	12785337	12804444	-	39454	Atg1	Dmel_CG10967	NP_001163433.1	855	Autophagy-related 1, isoform B
3L	NT_037436.4	12785337	12804444	-	39454	Atg1	Dmel_CG10967	NP_648601.1	835	Autophagy-related 1, isoform A
3L	NT_037436.4	12791581	12795612	+	39453	CG42709	Dmel_CG42709	NP_001287051.1	457	uncharacterized protein Dmel_CG42709, isoform D
3L	NT_037436.4	12791581	12795612	+	39453	CG42709	Dmel_CG42709	NP_648600.1	458	uncharacterized protein Dmel_CG42709, isoform A
3L	NT_037436.4	12791581	12795612	+	39453	CG42709	Dmel_CG42709	NP_729833.1	458	uncharacterized protein Dmel_CG42709, isoform B
3L	NT_037436.4	12791581	12795612	+	39453	CG42709	Dmel_CG42709	NP_001163434.1	458	uncharacterized protein Dmel_CG42709, isoform C
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_648602.1	1219	Sin3A-associated protein 130, isoform A
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_001261784.1	1210	Sin3A-associated protein 130, isoform G
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_729834.1	1294	Sin3A-associated protein 130, isoform C
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_001261783.1	1209	Sin3A-associated protein 130, isoform F
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_729836.3	1257	Sin3A-associated protein 130, isoform E
3L	NT_037436.4	12806265	12812829	+	39455	Sap130	Dmel_CG11006	NP_729835.1	1257	Sin3A-associated protein 130, isoform B
3L	NT_037436.4	12808769	12810004	+	317858	CG32110	Dmel_CG32110	NP_729837.1	411	uncharacterized protein Dmel_CG32110
3L	NT_037436.4	12813113	12813907	-	39456	CG10754	Dmel_CG10754	NP_648603.1	264	uncharacterized protein Dmel_CG10754
3L	NT_037436.4	12814532	12824518	+	39457	CG42588	Dmel_CG42588	NP_001189088.1	2705	uncharacterized protein Dmel_CG42588, isoform B
3L	NT_037436.4	12814532	12824518	+	39457	CG42588	Dmel_CG42588	NP_648604.2	2730	uncharacterized protein Dmel_CG42588, isoform A
3L	NT_037436.4	12825739	12832062	-	39458	CG10960	Dmel_CG10960	NP_648605.1	539	uncharacterized protein Dmel_CG10960, isoform B
3L	NT_037436.4	12825739	12827558	-	39458	CG10960	Dmel_CG10960	NP_729843.1	471	uncharacterized protein Dmel_CG10960, isoform C
3L	NT_037436.4	12825739	12827558	-	39458	CG10960	Dmel_CG10960	NP_729842.1	471	uncharacterized protein Dmel_CG10960, isoform A
3L	NT_037436.4	12844661	12850035	-	39459	CG10948	Dmel_CG10948	NP_729844.1	804	uncharacterized protein Dmel_CG10948, isoform C
3L	NT_037436.4	12844661	12849722	-	39459	CG10948	Dmel_CG10948	NP_729845.2	797	uncharacterized protein Dmel_CG10948, isoform D
3L	NT_037436.4	12845852	12850035	-	39459	CG10948	Dmel_CG10948	NP_648606.2	437	uncharacterized protein Dmel_CG10948, isoform B
3L	NT_037436.4	12850276	12852825	+	39460	Wbp2	Dmel_CG11009	NP_648607.3	384	WW domain binding protein 2, isoform E
3L	NT_037436.4	12850276	12851825	+	39460	Wbp2	Dmel_CG11009	NP_001261787.1	342	WW domain binding protein 2, isoform G
3L	NT_037436.4	12850276	12852512	+	39460	Wbp2	Dmel_CG11009	NP_001261785.1	226	WW domain binding protein 2, isoform D
3L	NT_037436.4	12850276	12852236	+	39460	Wbp2	Dmel_CG11009	NP_001261786.1	199	WW domain binding protein 2, isoform F
3L	NT_037436.4	12850276	12852236	+	39460	Wbp2	Dmel_CG11009	NP_001137945.1	337	WW domain binding protein 2, isoform C
3L	NT_037436.4	12850276	12852236	+	39460	Wbp2	Dmel_CG11009	NP_001137944.1	337	WW domain binding protein 2, isoform B
3L	NT_037436.4	12854049	12856475	+	39461	Ent3	Dmel_CG11010	NP_001261788.1	667	equilibrative nucleoside transporter 3, isoform B
3L	NT_037436.4	12854049	12856475	+	39461	Ent3	Dmel_CG11010	NP_001287052.1	668	equilibrative nucleoside transporter 3, isoform C
3L	NT_037436.4	12854049	12856475	+	39461	Ent3	Dmel_CG11010	NP_648608.2	668	equilibrative nucleoside transporter 3, isoform A
3L	NT_037436.4	12858210	12861284	-	317856	CG32107	Dmel_CG32107	NP_001261789.2	980	uncharacterized protein Dmel_CG32107, isoform D
3L	NT_037436.4	12858346	12861284	-	317856	CG32107	Dmel_CG32107	NP_729846.3	956	uncharacterized protein Dmel_CG32107, isoform E
3L	NT_037436.4	12861792	12862718	-	39462	CG10943	Dmel_CG10943	NP_648609.1	308	uncharacterized protein Dmel_CG10943
3L	NT_037436.4	12885052	12889167	+	39463	CG14120	Dmel_CG14120	NP_648610.1	1371	uncharacterized protein Dmel_CG14120
3L	NT_037436.4	12890224	12892162	+	39464	CG43894	Dmel_CG43894	NP_648611.2	232	uncharacterized protein Dmel_CG43894, isoform E
3L	NT_037436.4	12890224	12891527	+	39464	CG43894	Dmel_CG43894	NP_001261791.1	191	uncharacterized protein Dmel_CG43894, isoform D
3L	NT_037436.4	12890224	12891057	+	39464	CG43894	Dmel_CG43894	NP_001261790.1	235	uncharacterized protein Dmel_CG43894, isoform C
3L	NT_037436.4	12890224	12891057	+	39464	CG43894	Dmel_CG43894	NP_001034004.1	235	uncharacterized protein Dmel_CG43894, isoform B
3L	NT_037436.4	12892713	12894496	+	39465	CG14118	Dmel_CG14118	NP_648612.1	439	uncharacterized protein Dmel_CG14118
3L	NT_037436.4	12901375	12902574	-	39466	CG12520	Dmel_CG12520	NP_001097596.1	371	uncharacterized protein Dmel_CG12520, isoform B
3L	NT_037436.4	12902028	12902574	-	39466	CG12520	Dmel_CG12520	NP_001287053.1	160	uncharacterized protein Dmel_CG12520, isoform C
3L	NT_037436.4	12903025	12903672	-	317864	CG32117	Dmel_CG32117	NP_729853.1	215	uncharacterized protein Dmel_CG32117
3L	NT_037436.4	12912040	12913527	-	317862	CG32115	Dmel_CG32115	NP_729854.1	475	uncharacterized protein Dmel_CG32115
3L	NT_037436.4	12952730	12954537	-	39467	CG10752	Dmel_CG10752	NP_648614.1	539	uncharacterized protein Dmel_CG10752
3L	NT_037436.4	12964360	12965739	-	2768964	Or69a	Dmel_CG33264	NP_996069.1	393	odorant receptor 69a, isoform B
3L	NT_037436.4	12964360	12967733	-	2768964	Or69a	Dmel_CG33264	NP_996070.1	393	odorant receptor 69a, isoform A
3L	NT_037436.4	12971282	12972331	-	39469	CG10748	Dmel_CG10748	NP_648615.1	349	uncharacterized protein Dmel_CG10748
3L	NT_037436.4	12972526	12973569	+	39470	CG10749	Dmel_CG10749	NP_648616.1	347	uncharacterized protein Dmel_CG10749
3L	NT_037436.4	12995184	12997292	+	39471	CG11262	Dmel_CG11262	NP_648617.2	702	uncharacterized protein Dmel_CG11262
3L	NT_037436.4	13006912	13007709	+	39472	CG11263	Dmel_CG11263	NP_648618.1	265	uncharacterized protein Dmel_CG11263, isoform A
3L	NT_037436.4	13006912	13007709	+	39472	CG11263	Dmel_CG11263	NP_001163435.1	265	uncharacterized protein Dmel_CG11263, isoform B
3L	NT_037436.4	13008628	13008970	+	39473	CG14117	Dmel_CG14117	NP_001261792.1	94	uncharacterized protein Dmel_CG14117, isoform E
3L	NT_037436.4	13008628	13009187	+	39473	CG14117	Dmel_CG14117	NP_001246737.1	165	uncharacterized protein Dmel_CG14117, isoform D
3L	NT_037436.4	13009485	13011569	-	39474	CG11261	Dmel_CG11261	NP_648620.1	670	uncharacterized protein Dmel_CG11261
3L	NT_037436.4	13012105	13015137	-	39475	MICAL-like	Dmel_CG11259	NP_648621.1	1010	MICAL-like
3L	NT_037436.4	13016162	13016733	+	39476	CG11267	Dmel_CG11267	NP_648622.1	103	uncharacterized protein Dmel_CG11267
3L	NT_037436.4	13017193	13017762	-	39477	mRpL20	Dmel_CG11258	NP_524051.1	150	mitochondrial ribosomal protein L20
3L	NT_037436.4	13018381	13019475	+	39478	ste14	Dmel_CG11268	NP_001261793.1	299	isoprenylcysteine carboxylmethyltransferase, isoform B
3L	NT_037436.4	13018381	13019475	+	39478	ste14	Dmel_CG11268	NP_648623.1	299	isoprenylcysteine carboxylmethyltransferase, isoform A
3L	NT_037436.4	13020290	13022454	-	39479	AdenoK	Dmel_CG11255	NP_001287054.1	345	adenosine kinase, isoform C
3L	NT_037436.4	13020290	13022454	-	39479	AdenoK	Dmel_CG11255	NP_648624.1	345	adenosine kinase, isoform A
3L	NT_037436.4	13020290	13021644	-	39479	AdenoK	Dmel_CG11255	NP_729863.1	345	adenosine kinase, isoform B
3L	NT_037436.4	13023509	13024637	+	39480	RpS12	Dmel_CG11271	NP_729866.1	139	ribosomal protein S12
3L	NT_037436.4	13024826	13026359	-	39481	Zmynd10	Dmel_CG11253	NP_648625.1	451	ZMYND10 homolog
3L	NT_037436.4	13029292	13036101	+	4379911	CG17672	Dmel_CG17672	NP_001036603.1	249	uncharacterized protein Dmel_CG17672
3L	NT_037436.4	13037253	13040411	+	39483	SRm160	Dmel_CG11274	NP_648627.1	954	SRm160
3L	NT_037436.4	13042012	13043827	+	39484	RpS4	Dmel_CG11276	NP_729871.1	261	ribosomal protein S4, isoform A
3L	NT_037436.4	13042012	13043827	+	39484	RpS4	Dmel_CG11276	NP_524053.2	261	ribosomal protein S4, isoform B
3L	NT_037436.4	13042012	13043827	+	39484	RpS4	Dmel_CG11276	NP_001287055.1	261	ribosomal protein S4, isoform C
3L	NT_037436.4	13044920	13046395	+	39485	Syx13	Dmel_CG11278	NP_001261794.1	284	syntaxin 13, isoform B
3L	NT_037436.4	13044920	13046395	+	39485	Syx13	Dmel_CG11278	NP_524054.1	284	syntaxin 13, isoform A
3L	NT_037436.4	13047081	13047452	+	39486	CG11279	Dmel_CG11279	NP_648628.1	102	uncharacterized protein Dmel_CG11279, isoform A
3L	NT_037436.4	13047081	13047452	+	39486	CG11279	Dmel_CG11279	NP_001287056.1	102	uncharacterized protein Dmel_CG11279, isoform C
3L	NT_037436.4	13047081	13047452	+	39486	CG11279	Dmel_CG11279	NP_001261795.1	102	uncharacterized protein Dmel_CG11279, isoform B
3L	NT_037436.4	13060522	13061394	-	39487	CG14115	Dmel_CG14115	NP_648629.1	219	uncharacterized protein Dmel_CG14115
3L	NT_037436.4	13061879	13062687	+	5740867	CG34428	Dmel_CG34428	NP_001097597.1	230	uncharacterized protein Dmel_CG34428
3L	NT_037436.4	13063046	13063929	+	5740606	CG34429	Dmel_CG34429	NP_001097598.1	249	uncharacterized protein Dmel_CG34429
3L	NT_037436.4	13086504	13087166	-	39489	CG17300	Dmel_CG17300	NP_648631.1	152	uncharacterized protein Dmel_CG17300
3L	NT_037436.4	13088812	13089828	-	39490	CG11251	Dmel_CG11251	NP_648632.1	338	uncharacterized protein Dmel_CG11251
3L	NT_037436.4	13115298	13117511	+	39491	trn	Dmel_CG11280	NP_524055.2	737	tartan, isoform A
3L	NT_037436.4	13115298	13117553	+	39491	trn	Dmel_CG11280	NP_001261796.1	751	tartan, isoform B
3L	NT_037436.4	13136269	13137066	+	2768975	CG33262	Dmel_CG33262	NP_996071.2	208	uncharacterized protein Dmel_CG33262
3L	NT_037436.4	13174478	13176697	+	39492	snky	Dmel_CG11281	NP_648633.2	715	sneaky
3L	NT_037436.4	13247124	13248632	-	317866	CG32119	Dmel_CG32119	NP_729879.1	484	uncharacterized protein Dmel_CG32119
3L	NT_037436.4	13275689	13277311	+	39493	caps	Dmel_CG11282	NP_524056.3	540	capricious, isoform A
3L	NT_037436.4	13275689	13278031	+	39493	caps	Dmel_CG11282	NP_001036604.2	780	capricious, isoform D
3L	NT_037436.4	13275689	13278124	+	39493	caps	Dmel_CG11282	NP_001303391.1	811	capricious, isoform E
3L	NT_037436.4	13275689	13277311	+	39493	caps	Dmel_CG11282	NP_729880.2	540	capricious, isoform B
3L	NT_037436.4	13296689	13296856	-	8673995	Sfp70A4	Dmel_CG42480	NP_001287057.1	55	seminal fluid protein 70A4, isoform B
3L	NT_037436.4	13296689	13296856	-	8673995	Sfp70A4	Dmel_CG42480	NP_001163437.1	55	seminal fluid protein 70A4, isoform A
3L	NT_037436.4	13298871	13299020	-	8674058	CG42481	Dmel_CG42481	NP_001261798.1	49	uncharacterized protein Dmel_CG42481, isoform B
3L	NT_037436.4	13298871	13299020	-	8674058	CG42481	Dmel_CG42481	NP_001163438.1	49	uncharacterized protein Dmel_CG42481, isoform A
3L	NT_037436.4	13300017	13300151	-	12798240	CG43147	Dmel_CG43147	NP_001246741.1	44	uncharacterized protein Dmel_CG43147, isoform B
3L	NT_037436.4	13300017	13300151	-	12798240	CG43147	Dmel_CG43147	NP_001287058.1	44	uncharacterized protein Dmel_CG43147, isoform C
3L	NT_037436.4	13301638	13301870	+	39494	SP	Dmel_CG17673	NP_524057.2	55	Sex peptide
3L	NT_037436.4	13329218	13329518	+	50287	CG14113	Dmel_CG14113	NP_652431.1	82	uncharacterized protein Dmel_CG14113
3L	NT_037436.4	13349306	13354849	+	39495	CG17687	Dmel_CG17687	NP_648634.1	1544	uncharacterized protein Dmel_CG17687
3L	NT_037436.4	13356599	13357097	+	50286	Nplp2	Dmel_CG11051	NP_652430.1	86	Neuropeptide-like precursor 2, isoform A
3L	NT_037436.4	13356599	13357196	+	50286	Nplp2	Dmel_CG11051	NP_001303387.1	119	Neuropeptide-like precursor 2, isoform C
3L	NT_037436.4	13356599	13357097	+	50286	Nplp2	Dmel_CG11051	NP_001287059.1	86	Neuropeptide-like precursor 2, isoform B
3L	NT_037436.4	13377987	13380380	+	39497	CG14111	Dmel_CG14111	NP_648636.2	253	uncharacterized protein Dmel_CG14111
3L	NT_037436.4	13378622	13379062	+	39496	SNCF	Dmel_CG14112	NP_648635.1	146	SoxNeuro Co-Factor
3L	NT_037436.4	13380479	13381276	-	39498	CG14107	Dmel_CG14107	NP_648637.2	244	uncharacterized protein Dmel_CG14107
3L	NT_037436.4	13382805	13383905	+	39499	ImpL1	Dmel_CG10717	NP_729885.1	366	Ecdysone-inducible gene L1, isoform B
3L	NT_037436.4	13382805	13383905	+	39499	ImpL1	Dmel_CG10717	NP_524058.2	341	Ecdysone-inducible gene L1, isoform A
3L	NT_037436.4	13382805	13383905	+	39499	ImpL1	Dmel_CG10717	NP_001163439.1	340	Ecdysone-inducible gene L1, isoform C
3L	NT_037436.4	13384811	13385909	+	39500	CG14110	Dmel_CG14110	NP_648638.1	348	uncharacterized protein Dmel_CG14110
3L	NT_037436.4	13386715	13387774	-	39501	CG10171	Dmel_CG10171	NP_729888.1	334	uncharacterized protein Dmel_CG10171, isoform B
3L	NT_037436.4	13386715	13387774	-	39501	CG10171	Dmel_CG10171	NP_648639.1	330	uncharacterized protein Dmel_CG10171, isoform A
3L	NT_037436.4	13388450	13389872	-	39502	Poc1	Dmel_CG10191	NP_001261799.1	403	proteome of centrioles 1, isoform B
3L	NT_037436.4	13388630	13389872	-	39502	Poc1	Dmel_CG10191	NP_648640.1	391	proteome of centrioles 1, isoform A
3L	NT_037436.4	13396835	13400907	-	45328	sens	Dmel_CG32120	NP_524818.1	541	senseless
3L	NT_037436.4	13411529	13412452	-	39504	CG10222	Dmel_CG10222	NP_001287060.1	307	uncharacterized protein Dmel_CG10222, isoform B
3L	NT_037436.4	13411529	13412452	-	39504	CG10222	Dmel_CG10222	NP_648641.2	307	uncharacterized protein Dmel_CG10222, isoform A
3L	NT_037436.4	13412942	13416104	+	39505	flr	Dmel_CG10724	NP_648642.1	608	flare, isoform A
3L	NT_037436.4	13413052	13416104	+	39505	flr	Dmel_CG10724	NP_729891.1	604	flare, isoform B
3L	NT_037436.4	13417403	13420094	-	317867	CG32121	Dmel_CG32121	NP_001097599.1	648	uncharacterized protein Dmel_CG32121
3L	NT_037436.4	13423485	13424168	-	2768952	CG33263	Dmel_CG33263	NP_996072.1	227	uncharacterized protein Dmel_CG33263
3L	NT_037436.4	13424579	13425592	-	39506	CG14106	Dmel_CG14106	NP_648643.1	337	uncharacterized protein Dmel_CG14106
3L	NT_037436.4	13425962	13426636	-	39507	CG14105	Dmel_CG14105	NP_648644.1	185	uncharacterized protein Dmel_CG14105
3L	NT_037436.4	13429431	13430937	-	39508	CG10713	Dmel_CG10713	NP_648645.1	475	uncharacterized protein Dmel_CG10713
3L	NT_037436.4	13435854	13437096	-	39509	CG10154	Dmel_CG10154	NP_648646.2	316	uncharacterized protein Dmel_CG10154, isoform A
3L	NT_037436.4	13435854	13437096	-	39509	CG10154	Dmel_CG10154	NP_001189089.1	316	uncharacterized protein Dmel_CG10154, isoform B
3L	NT_037436.4	13437986	13438975	+	39510	CG10725	Dmel_CG10725	NP_648647.1	269	uncharacterized protein Dmel_CG10725
3L	NT_037436.4	13439357	13440435	-	39511	CG10140	Dmel_CG10140	NP_648648.2	297	uncharacterized protein Dmel_CG10140
3L	NT_037436.4	13441226	13442304	+	39512	CG14109	Dmel_CG14109	NP_648649.1	243	uncharacterized protein Dmel_CG14109, isoform A
3L	NT_037436.4	13441226	13442304	+	39512	CG14109	Dmel_CG14109	NP_001261800.1	243	uncharacterized protein Dmel_CG14109, isoform B
3L	NT_037436.4	13442719	13449045	+	39513	cmb	Dmel_CG10732	NP_001261802.1	1624	combover, isoform D
3L	NT_037436.4	13442719	13449045	+	39513	cmb	Dmel_CG10732	NP_001261801.1	1626	combover, isoform C
3L	NT_037436.4	13442719	13449045	+	39513	cmb	Dmel_CG10732	NP_729901.1	1657	combover, isoform A
3L	NT_037436.4	13444222	13446887	+	39513	cmb	Dmel_CG10732	NP_648650.1	809	combover, isoform B
3L	NT_037436.4	13449309	13450259	-	39514	CG10133	Dmel_CG10133	NP_648651.1	316	uncharacterized protein Dmel_CG10133
3L	NT_037436.4	13456256	13457238	-	39515	CG10116	Dmel_CG10116	NP_648652.1	289	uncharacterized protein Dmel_CG10116
3L	NT_037436.4	13460263	13465266	+	39516	CG10738	Dmel_CG10738	NP_001246742.1	1237	uncharacterized protein Dmel_CG10738, isoform E
3L	NT_037436.4	13460263	13465266	+	39516	CG10738	Dmel_CG10738	NP_648653.2	1248	uncharacterized protein Dmel_CG10738, isoform C
3L	NT_037436.4	13460263	13465266	+	39516	CG10738	Dmel_CG10738	NP_729905.2	1250	uncharacterized protein Dmel_CG10738, isoform D
3L	NT_037436.4	13460263	13465266	+	39516	CG10738	Dmel_CG10738	NP_001246743.1	1235	uncharacterized protein Dmel_CG10738, isoform F
3L	NT_037436.4	13466858	13469797	-	39517	CG10089	Dmel_CG10089	NP_648654.1	447	uncharacterized protein Dmel_CG10089, isoform D
3L	NT_037436.4	13466858	13469797	-	39517	CG10089	Dmel_CG10089	NP_001287061.1	447	uncharacterized protein Dmel_CG10089, isoform F
3L	NT_037436.4	13466858	13469156	-	39517	CG10089	Dmel_CG10089	NP_001261803.1	447	uncharacterized protein Dmel_CG10089, isoform E
3L	NT_037436.4	13468049	13469797	-	39517	CG10089	Dmel_CG10089	NP_729907.1	327	uncharacterized protein Dmel_CG10089, isoform A
3L	NT_037436.4	13468049	13469797	-	39517	CG10089	Dmel_CG10089	NP_729908.1	327	uncharacterized protein Dmel_CG10089, isoform B
3L	NT_037436.4	13468049	13469156	-	39517	CG10089	Dmel_CG10089	NP_729909.1	327	uncharacterized protein Dmel_CG10089, isoform C
3L	NT_037436.4	13478228	13482753	+	39518	stv	Dmel_CG32130	NP_729910.1	609	starvin, isoform A
3L	NT_037436.4	13478228	13482753	+	39518	stv	Dmel_CG32130	NP_001261804.1	610	starvin, isoform F
3L	NT_037436.4	13478228	13482753	+	39518	stv	Dmel_CG32130	NP_001097600.1	635	starvin, isoform E
3L	NT_037436.4	13481060	13482753	+	39518	stv	Dmel_CG32130	NP_001261805.1	516	starvin, isoform G
3L	NT_037436.4	13481060	13482753	+	39518	stv	Dmel_CG32130	NP_729912.1	516	starvin, isoform B
3L	NT_037436.4	13481060	13482753	+	39518	stv	Dmel_CG32130	NP_729911.1	542	starvin, isoform C
3L	NT_037436.4	13481060	13482753	+	39518	stv	Dmel_CG32130	NP_729913.1	516	starvin, isoform D
3L	NT_037436.4	13484014	13485857	-	39520	Abp1	Dmel_CG10083	NP_648657.1	531	actin binding protein 1
3L	NT_037436.4	13487670	13502055	+	39521	Tgi	Dmel_CG10741	NP_648658.1	382	Tondu-domain-containing growth inhibitor, isoform B
3L	NT_037436.4	13495627	13502055	+	39521	Tgi	Dmel_CG10741	NP_729916.1	535	Tondu-domain-containing growth inhibitor, isoform A
3L	NT_037436.4	13503349	13509798	+	39522	Spt20	Dmel_CG17689	NP_648659.2	1873	Spt20, isoform A
3L	NT_037436.4	13503349	13509798	+	39522	Spt20	Dmel_CG17689	NP_001287062.1	1873	Spt20, isoform D
3L	NT_037436.4	13503349	13508880	+	39522	Spt20	Dmel_CG17689	NP_001034005.2	1646	Spt20, isoform C
3L	NT_037436.4	13511704	13513024	-	39523	Vps36	Dmel_CG10711	NP_648660.1	399	vacuolar protein sorting 36
3L	NT_037436.4	13513592	13515760	+	39524	Liprin-beta	Dmel_CG10743	NP_729920.1	680	Liprin-beta, isoform B
3L	NT_037436.4	13513592	13515760	+	39524	Liprin-beta	Dmel_CG10743	NP_648661.1	680	Liprin-beta, isoform A
3L	NT_037436.4	13513592	13515760	+	39524	Liprin-beta	Dmel_CG10743	NP_001261806.1	680	Liprin-beta, isoform C
3L	NT_037436.4	13516529	13518658	-	39525	CG10710	Dmel_CG10710	NP_648662.1	709	uncharacterized protein Dmel_CG10710
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189098.1	331	bruno 3, isoform K
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189091.1	382	bruno 3, isoform D
3L	NT_037436.4	13538744	13777957	-	39527	bru3	Dmel_CG43744	NP_001261808.1	403	bruno 3, isoform O
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189090.1	396	bruno 3, isoform C
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189099.1	345	bruno 3, isoform L
3L	NT_037436.4	13538744	13777957	-	39527	bru3	Dmel_CG43744	NP_001261807.1	403	bruno 3, isoform N
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189096.1	384	bruno 3, isoform I
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_729923.1	422	bruno 3, isoform A
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189094.1	390	bruno 3, isoform G
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189100.1	370	bruno 3, isoform M
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189093.1	337	bruno 3, isoform F
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189092.1	408	bruno 3, isoform E
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_001189095.1	416	bruno 3, isoform H
3L	NT_037436.4	13538744	13664478	-	39527	bru3	Dmel_CG43744	NP_524059.4	363	bruno 3, isoform B
3L	NT_037436.4	13608806	13664478	-	39527	bru3	Dmel_CG43744	NP_001189097.1	49	bruno 3, isoform J
3L	NT_037436.4	13837802	13838047	+	12798242	CG43184	Dmel_CG43184	NP_001246744.1	81	uncharacterized protein Dmel_CG43184
3L	NT_037436.4	13841274	13842198	-	39528	CG8757	Dmel_CG8757	NP_648664.2	252	CG8757
3L	NT_037436.4	13842660	13842890	-	50285	CG8750	Dmel_CG8750	NP_652429.1	76	CG8750, isoform A
3L	NT_037436.4	13842660	13842890	-	50285	CG8750	Dmel_CG8750	NP_001287063.1	76	CG8750, isoform B
3L	NT_037436.4	13843861	13845046	+	117407	Tsp68C	Dmel_CG32136	NP_729927.2	362	tetraspanin 68C, isoform C
3L	NT_037436.4	13843861	13845046	+	117407	Tsp68C	Dmel_CG32136	NP_729926.1	362	tetraspanin 68C, isoform A
3L	NT_037436.4	13846208	13859931	+	39529	Hml	Dmel_CG7002	NP_524060.2	3843	hemolectin, isoform A
3L	NT_037436.4	13846208	13859931	+	39529	Hml	Dmel_CG7002	NP_001261809.1	3842	hemolectin, isoform B
3L	NT_037436.4	13860757	13866691	-	39530	CG8745	Dmel_CG8745	NP_648665.1	494	CG8745
3L	NT_037436.4	13871937	13892067	-	39533	dysc	Dmel_CG43749	NP_001261810.1	1254	dyschronic, isoform G
3L	NT_037436.4	13872729	13892067	-	39533	dysc	Dmel_CG43749	NP_648668.3	990	dyschronic, isoform C
3L	NT_037436.4	13872729	13892067	-	39533	dysc	Dmel_CG43749	NP_001137947.1	866	dyschronic, isoform E
3L	NT_037436.4	13872729	13892067	-	39533	dysc	Dmel_CG43749	NP_001261812.1	986	dyschronic, isoform I
3L	NT_037436.4	13872729	13892067	-	39533	dysc	Dmel_CG43749	NP_001261813.1	982	dyschronic, isoform J
3L	NT_037436.4	13872729	13892067	-	39533	dysc	Dmel_CG43749	NP_001261811.1	1015	dyschronic, isoform H
3L	NT_037436.4	13882655	13882891	+	39531	CG13737	Dmel_CG13737	NP_729931.1	78	uncharacterized protein Dmel_CG13737, isoform B
3L	NT_037436.4	13882655	13882891	+	39531	CG13737	Dmel_CG13737	NP_648666.1	78	uncharacterized protein Dmel_CG13737, isoform A
3L	NT_037436.4	13886029	13892067	-	39533	dysc	Dmel_CG43749	NP_001137946.1	689	dyschronic, isoform F
3L	NT_037436.4	13907767	13919193	-	44115	Rgl	Dmel_CG8865	NP_001261814.1	973	Ral guanine nucleotide dissociation stimulator-like, isoform E
3L	NT_037436.4	13907824	13921725	-	44115	Rgl	Dmel_CG8865	NP_788504.1	774	Ral guanine nucleotide dissociation stimulator-like, isoform C
3L	NT_037436.4	13907824	13921725	-	44115	Rgl	Dmel_CG8865	NP_788505.1	774	Ral guanine nucleotide dissociation stimulator-like, isoform D
3L	NT_037436.4	13907824	13921725	-	44115	Rgl	Dmel_CG8865	NP_788503.1	774	Ral guanine nucleotide dissociation stimulator-like, isoform B
3L	NT_037436.4	13907824	13919193	-	44115	Rgl	Dmel_CG8865	NP_524697.1	954	Ral guanine nucleotide dissociation stimulator-like, isoform A
3L	NT_037436.4	13925933	13928908	-	39535	CG8833	Dmel_CG8833	NP_648669.1	952	CG8833
3L	NT_037436.4	13929849	13934193	+	39536	DCTN1-p150	Dmel_CG9206	NP_524061.1	1265	dynactin 1, p150 subunit
3L	NT_037436.4	13941026	13961852	+	39537	CG32137	Dmel_CG32137	NP_729935.1	620	uncharacterized protein Dmel_CG32137, isoform B
3L	NT_037436.4	13941308	13961852	+	39537	CG32137	Dmel_CG32137	NP_729936.1	526	uncharacterized protein Dmel_CG32137, isoform A
3L	NT_037436.4	13962773	13964629	-	39539	Meics	Dmel_CG8474	NP_001261815.1	571	meiotic central spindle, isoform B
3L	NT_037436.4	13962773	13964629	-	39539	Meics	Dmel_CG8474	NP_524062.1	583	meiotic central spindle, isoform A
3L	NT_037436.4	13965346	13971663	+	317878	Nxf3	Dmel_CG32135	NP_648672.1	982	short spindle 2, isoform A
3L	NT_037436.4	13965346	13971663	+	317878	Nxf3	Dmel_CG32135	NP_001287065.1	982	short spindle 2, isoform C
3L	NT_037436.4	13966816	13968495	+	317878	Nxf3	Dmel_CG32135	NP_001287064.1	559	nuclear export factor 3, isoform C
3L	NT_037436.4	13966816	13968495	+	317878	Nxf3	Dmel_CG32135	NP_729938.1	559	nuclear export factor 3, isoform B
3L	NT_037436.4	13973159	13973440	-	39541	CG13738	Dmel_CG13738	NP_648673.1	93	uncharacterized protein Dmel_CG13738
3L	NT_037436.4	13974571	13977637	+	39542	Hsc70-1	Dmel_CG8937	NP_524063.1	641	heat shock protein cognate 1, isoform A
3L	NT_037436.4	13975970	13977637	+	39542	Hsc70-1	Dmel_CG8937	NP_729941.1	555	heat shock protein cognate 1, isoform D
3L	NT_037436.4	13975970	13977637	+	39542	Hsc70-1	Dmel_CG8937	NP_729940.1	555	heat shock protein cognate 1, isoform C
3L	NT_037436.4	13979037	13985508	-	39543	CG17364	Dmel_CG17364	NP_001261816.1	514	uncharacterized protein Dmel_CG17364, isoform D
3L	NT_037436.4	13979037	13985508	-	39543	CG17364	Dmel_CG17364	NP_648674.3	514	uncharacterized protein Dmel_CG17364, isoform F
3L	NT_037436.4	13979620	13985508	-	39543	CG17364	Dmel_CG17364	NP_001261817.1	586	uncharacterized protein Dmel_CG17364, isoform E
3L	NT_037436.4	13981765	13985508	-	39543	CG17364	Dmel_CG17364	NP_788506.1	653	uncharacterized protein Dmel_CG17364, isoform C
3L	NT_037436.4	13986655	13987116	+	39545	CG17362	Dmel_CG17362	NP_648676.2	153	uncharacterized protein Dmel_CG17362
3L	NT_037436.4	13987942	13988427	+	39546	CG9040	Dmel_CG9040	NP_648677.1	161	CG9040
3L	NT_037436.4	13994352	13996470	+	39547	26-29-p	Dmel_CG8947	NP_620470.1	549	26-29kD-proteinase
3L	NT_037436.4	13997206	13997838	+	39548	CG17361	Dmel_CG17361	NP_648678.3	210	uncharacterized protein Dmel_CG17361
3L	NT_037436.4	13998163	13999182	-	39549	CG17359	Dmel_CG17359	NP_648679.1	339	uncharacterized protein Dmel_CG17359
3L	NT_037436.4	13999735	14001626	-	39550	Nprl3	Dmel_CG8783	NP_729945.1	610	nitrogen permease regulator-like 3, isoform B
3L	NT_037436.4	13999735	14001626	-	39550	Nprl3	Dmel_CG8783	NP_648680.2	610	nitrogen permease regulator-like 3, isoform A
3L	NT_037436.4	13999735	14001626	-	39550	Nprl3	Dmel_CG8783	NP_001261818.1	610	nitrogen permease regulator-like 3, isoform C
3L	NT_037436.4	14007850	14017877	+	39551	upSET	Dmel_CG9007	NP_648681.1	3146	upSET, isoform A
3L	NT_037436.4	14007850	14017877	+	39551	upSET	Dmel_CG9007	NP_001261819.1	3146	upSET, isoform B
3L	NT_037436.4	14021221	14028844	-	39552	Ptip	Dmel_CG32133	NP_729947.2	2294	PAX transcription activation domain interacting protein
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_001261821.1	119	endosulfine, isoform F
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_648684.1	119	endosulfine, isoform A
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_729949.1	119	endosulfine, isoform B
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_001261820.1	119	endosulfine, isoform E
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_001246746.1	119	endosulfine, isoform D
3L	NT_037436.4	14030247	14030992	-	39554	endos	Dmel_CG6513	NP_001246745.1	119	endosulfine, isoform C
3L	NT_037436.4	14032228	14033996	+	39555	CG6650	Dmel_CG6650	NP_001246747.1	501	CG6650, isoform B
3L	NT_037436.4	14032228	14033996	+	39555	CG6650	Dmel_CG6650	NP_648685.1	501	CG6650, isoform A
3L	NT_037436.4	14032228	14033996	+	39555	CG6650	Dmel_CG6650	NP_001287066.1	501	CG6650, isoform C
3L	NT_037436.4	14034925	14036670	+	39556	CG6661	Dmel_CG6661	NP_648686.3	581	CG6661
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_001189101.1	804	Hsc70Cb, isoform E
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_001189104.1	836	Hsc70Cb, isoform H
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_729952.1	804	Hsc70Cb, isoform C
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_001189103.1	836	Hsc70Cb, isoform G
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_648687.1	804	Hsc70Cb, isoform A
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_001189102.1	804	Hsc70Cb, isoform F
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_729951.1	804	Hsc70Cb, isoform B
3L	NT_037436.4	14037644	14043071	+	39557	Hsc70Cb	Dmel_CG6603	NP_001261822.1	804	Hsc70Cb, isoform I
3L	NT_037436.4	14043850	14049669	-	39558	Neurl4	Dmel_CG46284	NP_648688.2	1780	neuralized E3 ubiquitin protein ligase 4
3L	NT_037436.4	14051336	14052208	+	39559	CG6833	Dmel_CG6833	NP_001189105.1	290	CG6833, isoform B
3L	NT_037436.4	14051336	14052208	+	39559	CG6833	Dmel_CG6833	NP_648689.1	290	CG6833, isoform A
3L	NT_037436.4	14052541	14052996	-	39560	CG13484	Dmel_CG13484	NP_648690.1	151	uncharacterized protein Dmel_CG13484
3L	NT_037436.4	14054068	14069145	+	39561	Frl	Dmel_CG32138	NP_001261824.1	1113	Formin-like, isoform D
3L	NT_037436.4	14054068	14070134	+	39561	Frl	Dmel_CG32138	NP_001137948.1	1174	Formin-like, isoform C
3L	NT_037436.4	14054068	14070134	+	39561	Frl	Dmel_CG32138	NP_729954.2	1183	Formin-like, isoform A
3L	NT_037436.4	14054068	14070134	+	39561	Frl	Dmel_CG32138	NP_729955.2	1164	Formin-like, isoform B
3L	NT_037436.4	14071968	14075945	+	45460	Pex1	Dmel_CG6760	NP_652016.1	1006	peroxin 1
3L	NT_037436.4	14079612	14082855	+	39564	btl	Dmel_CG32134	NP_001014583.1	1052	breathless, isoform B
3L	NT_037436.4	14079612	14082855	+	39564	btl	Dmel_CG32134	NP_729956.1	1052	breathless, isoform A
3L	NT_037436.4	14083628	14085673	+	39565	CG8100	Dmel_CG8100	NP_648693.2	648	CG8100, isoform A
3L	NT_037436.4	14083628	14085673	+	39565	CG8100	Dmel_CG8100	NP_001261825.1	648	CG8100, isoform B
3L	NT_037436.4	14083628	14085673	+	39565	CG8100	Dmel_CG8100	NP_001303379.1	648	CG8100, isoform C
3L	NT_037436.4	14094810	14097959	-	39566	Fbp1	Dmel_CG17285	NP_524065.1	1029	Fat body protein 1, isoform A
3L	NT_037436.4	14094810	14097959	-	39566	Fbp1	Dmel_CG17285	NP_001261826.1	1027	Fat body protein 1, isoform D
3L	NT_037436.4	14094810	14097803	-	39566	Fbp1	Dmel_CG17285	NP_729959.1	997	Fat body protein 1, isoform B
3L	NT_037436.4	14104197	14107074	-	39567	Sox21a	Dmel_CG7345	NP_001261827.1	407	Sox21a, isoform B
3L	NT_037436.4	14104254	14107074	-	39567	Sox21a	Dmel_CG7345	NP_648694.1	388	Sox21a, isoform A
3L	NT_037436.4	14112976	14126072	-	39569	Sox21b	Dmel_CG32139	NP_001261829.1	587	Sox21b, isoform C
3L	NT_037436.4	14113024	14126072	-	39569	Sox21b	Dmel_CG32139	NP_001261828.1	571	Sox21b, isoform B
3L	NT_037436.4	14113024	14126072	-	39569	Sox21b	Dmel_CG32139	NP_648695.1	571	Sox21b, isoform A
3L	NT_037436.4	14176190	14177338	-	39570	D	Dmel_CG5893	NP_001261831.1	382	dichaete, isoform C
3L	NT_037436.4	14176190	14177338	-	39570	D	Dmel_CG5893	NP_524066.1	382	dichaete, isoform A
3L	NT_037436.4	14176190	14177338	-	39570	D	Dmel_CG5893	NP_001261830.1	382	dichaete, isoform B
3L	NT_037436.4	14176190	14177338	-	39570	D	Dmel_CG5893	NP_001261832.1	382	dichaete, isoform D
3L	NT_037436.4	14186368	14189422	-	39571	nan	Dmel_CG5842	NP_648696.2	833	nanchung, isoform A
3L	NT_037436.4	14186368	14189422	-	39571	nan	Dmel_CG5842	NP_001261833.1	834	nanchung, isoform B
3L	NT_037436.4	14199968	14232055	+	39572	nuf	Dmel_CG33991	NP_001246749.1	530	nuclear fallout, isoform G
3L	NT_037436.4	14199968	14232055	+	39572	nuf	Dmel_CG33991	NP_001034009.1	502	nuclear fallout, isoform C
3L	NT_037436.4	14199968	14232055	+	39572	nuf	Dmel_CG33991	NP_001246750.1	529	nuclear fallout, isoform H
3L	NT_037436.4	14199968	14232055	+	39572	nuf	Dmel_CG33991	NP_001034011.1	502	nuclear fallout, isoform A
3L	NT_037436.4	14199968	14232055	+	39572	nuf	Dmel_CG33991	NP_001246753.1	515	nuclear fallout, isoform L
3L	NT_037436.4	14203434	14204209	+	317880	CG32141	Dmel_CG32141	NP_729963.1	238	uncharacterized protein Dmel_CG32141
3L	NT_037436.4	14213156	14232055	+	39572	nuf	Dmel_CG33991	NP_001034007.1	305	nuclear fallout, isoform B
3L	NT_037436.4	14213156	14232055	+	39572	nuf	Dmel_CG33991	NP_001246748.1	318	nuclear fallout, isoform M
3L	NT_037436.4	14218383	14218877	+	39573	CG7768	Dmel_CG7768	NP_648697.1	164	CG7768, isoform B
3L	NT_037436.4	14218383	14218877	+	39573	CG7768	Dmel_CG7768	NP_729966.1	164	CG7768, isoform A
3L	NT_037436.4	14225687	14232055	+	39572	nuf	Dmel_CG33991	NP_001034008.1	528	nuclear fallout, isoform E
3L	NT_037436.4	14225687	14232055	+	39572	nuf	Dmel_CG33991	NP_001246751.1	541	nuclear fallout, isoform J
3L	NT_037436.4	14225687	14232055	+	39572	nuf	Dmel_CG33991	NP_001246752.1	541	nuclear fallout, isoform K
3L	NT_037436.4	14225687	14232055	+	39572	nuf	Dmel_CG33991	NP_001034006.1	528	nuclear fallout, isoform F
3L	NT_037436.4	14230026	14232055	+	39572	nuf	Dmel_CG33991	NP_001034010.1	316	nuclear fallout, isoform D
3L	NT_037436.4	14233487	14234514	+	39574	CG7924	Dmel_CG7924	NP_648698.1	321	CG7924
3L	NT_037436.4	14235241	14235639	-	5740216	CG34244	Dmel_CG34244	NP_001097604.1	112	uncharacterized protein Dmel_CG34244, isoform A
3L	NT_037436.4	14235241	14235639	-	5740216	CG34244	Dmel_CG34244	NP_001261834.1	112	uncharacterized protein Dmel_CG34244, isoform B
3L	NT_037436.4	14236768	14238125	+	39575	CG7906	Dmel_CG7906	NP_648699.1	354	CG7906, isoform A
3L	NT_037436.4	14236768	14238125	+	39575	CG7906	Dmel_CG7906	NP_001261835.1	356	CG7906, isoform B
3L	NT_037436.4	14275055	14367373	+	45307	fz	Dmel_CG17697	NP_001261836.1	612	frizzled, isoform C
3L	NT_037436.4	14275055	14367280	+	45307	fz	Dmel_CG17697	NP_524812.1	581	frizzled, isoform A
3L	NT_037436.4	14329437	14329745	+	39577	CG13482	Dmel_CG13482	NP_648700.1	102	uncharacterized protein Dmel_CG13482
3L	NT_037436.4	14369113	14369643	-	39579	CG13481	Dmel_CG13481	NP_001261837.1	176	uncharacterized protein Dmel_CG13481, isoform C
3L	NT_037436.4	14369113	14369643	-	39579	CG13481	Dmel_CG13481	NP_001097605.1	176	uncharacterized protein Dmel_CG13481, isoform B
3L	NT_037436.4	14381965	14382942	+	12798252	CG43120	Dmel_CG43120	NP_001246754.1	286	uncharacterized protein Dmel_CG43120
3L	NT_037436.4	14400873	14402698	-	39580	CG3868	Dmel_CG3868	NP_648702.1	349	CG3868
3L	NT_037436.4	14403872	14409762	-	39581	stwl	Dmel_CG3836	NP_524068.2	1037	stonewall, isoform A
3L	NT_037436.4	14403872	14409762	-	39581	stwl	Dmel_CG3836	NP_001261839.1	1037	stonewall, isoform C
3L	NT_037436.4	14403872	14408779	-	39581	stwl	Dmel_CG3836	NP_001261838.1	999	stonewall, isoform B
3L	NT_037436.4	14411095	14412573	+	39582	CG3919	Dmel_CG3919	NP_001261840.1	318	CG3919, isoform C
3L	NT_037436.4	14411095	14412573	+	39582	CG3919	Dmel_CG3919	NP_648703.4	302	CG3919, isoform B
3L	NT_037436.4	14413362	14476416	-	39583	bbg	Dmel_CG42230	NP_001137949.1	1101	big bang, isoform E
3L	NT_037436.4	14413362	14513248	-	39583	bbg	Dmel_CG42230	NP_648705.2	2637	big bang, isoform C
3L	NT_037436.4	14413362	14417034	-	39583	bbg	Dmel_CG42230	NP_001137951.1	1033	big bang, isoform G
3L	NT_037436.4	14413362	14417034	-	39583	bbg	Dmel_CG42230	NP_001137950.1	1033	big bang, isoform F
3L	NT_037436.4	14413362	14513248	-	39583	bbg	Dmel_CG42230	NP_001246755.1	2637	big bang, isoform K
3L	NT_037436.4	14413362	14417034	-	39583	bbg	Dmel_CG42230	NP_001137952.1	1033	big bang, isoform H
3L	NT_037436.4	14413362	14438450	-	39583	bbg	Dmel_CG42230	NP_648704.2	1095	big bang, isoform I
3L	NT_037436.4	14413362	14509879	-	39583	bbg	Dmel_CG42230	NP_001137953.1	1842	big bang, isoform J
3L	NT_037436.4	14517992	14518450	+	39585	CG9592	Dmel_CG9592	NP_648706.2	152	CG9592
3L	NT_037436.4	14519853	14521667	-	39586	CG4613	Dmel_CG4613	NP_001261841.1	374	CG4613, isoform C
3L	NT_037436.4	14519853	14521667	-	39586	CG4613	Dmel_CG4613	NP_648707.2	374	CG4613, isoform B
3L	NT_037436.4	14536634	14537191	+	12798253	CG43246	Dmel_CG43246	NP_001246756.1	168	uncharacterized protein Dmel_CG43246
3L	NT_037436.4	14538032	14539892	+	39587	Mpcp	Dmel_CG4994	NP_729978.1	356	mitochondrial phosphate carrier protein, isoform B
3L	NT_037436.4	14538032	14539892	+	39587	Mpcp	Dmel_CG4994	NP_001246757.1	356	mitochondrial phosphate carrier protein, isoform C
3L	NT_037436.4	14538032	14539892	+	39587	Mpcp	Dmel_CG4994	NP_524069.2	356	mitochondrial phosphate carrier protein, isoform A
3L	NT_037436.4	14542119	14550089	-	39588	Gbs-70E	Dmel_CG9238	NP_648708.2	384	glycogen binding subunit 70E, isoform B
3L	NT_037436.4	14542119	14547412	-	39588	Gbs-70E	Dmel_CG9238	NP_729979.1	330	glycogen binding subunit 70E, isoform A
3L	NT_037436.4	14542119	14550089	-	39588	Gbs-70E	Dmel_CG9238	NP_001261842.1	384	glycogen binding subunit 70E, isoform C
3L	NT_037436.4	14560086	14562597	+	3885643	CG34039	Dmel_CG34039	NP_001034012.2	198	uncharacterized protein Dmel_CG34039
3L	NT_037436.4	14560248	14560730	-	47746	Lk	Dmel_CG13480	NP_524893.2	160	leucokinin
3L	NT_037436.4	14567683	14568057	+	10178900	CG42758	Dmel_CG42758	NP_001189106.1	124	uncharacterized protein Dmel_CG42758
3L	NT_037436.4	14583867	14598713	-	53446	HGTX	Dmel_CG13475	NP_652614.1	513	HGTX
3L	NT_037436.4	14619445	14621583	+	39592	shd	Dmel_CG13478	NP_996074.1	540	shade, isoform B
3L	NT_037436.4	14619445	14621583	+	39592	shd	Dmel_CG13478	NP_001261843.1	540	shade, isoform D
3L	NT_037436.4	14619956	14621583	+	39592	shd	Dmel_CG13478	NP_648709.2	433	shade, isoform C
3L	NT_037436.4	14626873	14627793	+	39593	CG9628	Dmel_CG9628	NP_001163442.1	175	CG9628, isoform C
3L	NT_037436.4	14626873	14627793	+	39593	CG9628	Dmel_CG9628	NP_729982.1	175	CG9628, isoform B
3L	NT_037436.4	14627037	14627793	+	39593	CG9628	Dmel_CG9628	NP_648710.1	162	CG9628, isoform A
3L	NT_037436.4	14628301	14631983	-	39594	RecQ5	Dmel_CG4879	NP_729983.1	1058	RecQ5 helicase, isoform B
3L	NT_037436.4	14630440	14631983	-	39594	RecQ5	Dmel_CG4879	NP_001014584.1	468	RecQ5 helicase, isoform C
3L	NT_037436.4	14630509	14631983	-	39594	RecQ5	Dmel_CG4879	NP_524070.2	470	RecQ5 helicase, isoform A
3L	NT_037436.4	14633073	14670618	+	39596	dlp	Dmel_CG32146	NP_996075.2	764	dally-like, isoform C
3L	NT_037436.4	14633073	14670618	+	39596	dlp	Dmel_CG32146	NP_524071.2	765	dally-like, isoform A
3L	NT_037436.4	14672047	14672400	-	12798254	CG43121	Dmel_CG43121	NP_001246758.1	117	uncharacterized protein Dmel_CG43121
3L	NT_037436.4	14674681	14677758	-	39597	CG4914	Dmel_CG4914	NP_648711.1	374	CG4914
3L	NT_037436.4	14680377	14747094	+	44297	ome	Dmel_CG42280	NP_001137955.1	923	omega, isoform E
3L	NT_037436.4	14684902	14685645	+	39598	CG5048	Dmel_CG5048	NP_648712.1	210	CG5048
3L	NT_037436.4	14691429	14691770	+	39599	CG13477	Dmel_CG13477	NP_648713.1	113	uncharacterized protein Dmel_CG13477
3L	NT_037436.4	14696654	14697100	-	39600	CG13474	Dmel_CG13474	NP_648714.1	148	uncharacterized protein Dmel_CG13474
3L	NT_037436.4	14697313	14698320	-	39601	CG17177	Dmel_CG17177	NP_001261845.1	335	uncharacterized protein Dmel_CG17177, isoform B
3L	NT_037436.4	14697313	14701678	-	39601	CG17177	Dmel_CG17177	NP_648715.1	1333	uncharacterized protein Dmel_CG17177, isoform A
3L	NT_037436.4	14705544	14705993	+	39602	CG13476	Dmel_CG13476	NP_996076.1	149	uncharacterized protein Dmel_CG13476
3L	NT_037436.4	14728840	14729259	+	39603	CG13473	Dmel_CG13473	NP_648717.1	139	uncharacterized protein Dmel_CG13473
3L	NT_037436.4	14732649	14733449	-	39604	CG13471	Dmel_CG13471	NP_648718.1	266	uncharacterized protein Dmel_CG13471
3L	NT_037436.4	14736088	14747094	+	44297	ome	Dmel_CG42280	NP_524739.1	802	omega, isoform F
3L	NT_037436.4	14736088	14747094	+	44297	ome	Dmel_CG42280	NP_001097606.1	1040	omega, isoform G
3L	NT_037436.4	14744195	14747094	+	44297	ome	Dmel_CG42280	NP_001261844.1	784	omega, isoform H
3L	NT_037436.4	14748703	14749659	-	8674092	CG42507	Dmel_CG42507	NP_001163443.1	318	uncharacterized protein Dmel_CG42507, isoform A
3L	NT_037436.4	14748703	14749659	-	8674092	CG42507	Dmel_CG42507	NP_001163444.1	318	uncharacterized protein Dmel_CG42507, isoform B
3L	NT_037436.4	14749675	14757095	-	8674092	CG42507	Dmel_CG42507	NP_001034015.1	567	Trithorax-like, isoform I
3L	NT_037436.4	14749675	14757095	-	8674092	CG42507	Dmel_CG42507	NP_001034013.2	608	Trithorax-like, isoform J
3L	NT_037436.4	14751159	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996082.1	582	Trithorax-like, isoform F
3L	NT_037436.4	14751159	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996080.1	582	Trithorax-like, isoform A
3L	NT_037436.4	14751159	14757095	-	8674092	CG42507	Dmel_CG42507	NP_001261846.1	623	Trithorax-like, isoform K
3L	NT_037436.4	14752906	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996079.1	519	Trithorax-like, isoform D
3L	NT_037436.4	14752906	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996081.1	519	Trithorax-like, isoform E
3L	NT_037436.4	14752906	14757095	-	8674092	CG42507	Dmel_CG42507	NP_001034014.1	519	Trithorax-like, isoform H
3L	NT_037436.4	14752906	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996077.1	519	Trithorax-like, isoform C
3L	NT_037436.4	14752906	14757095	-	8674092	CG42507	Dmel_CG42507	NP_996078.1	519	Trithorax-like, isoform B
3L	NT_037436.4	14760579	14761832	-	2768977	CG33260	Dmel_CG33260	NP_001036605.2	276	uncharacterized protein Dmel_CG33260
3L	NT_037436.4	14763940	14765703	+	39608	CG9384	Dmel_CG9384	NP_001261847.1	587	CG9384, isoform B
3L	NT_037436.4	14763940	14765703	+	39608	CG9384	Dmel_CG9384	NP_648720.3	587	CG9384, isoform A
3L	NT_037436.4	14767749	14769275	-	39609	CG17173	Dmel_CG17173	NP_648721.1	508	uncharacterized protein Dmel_CG17173
3L	NT_037436.4	14769666	14775995	-	39610	mop	Dmel_CG9311	NP_648722.2	1833	myopic
3L	NT_037436.4	14776801	14786078	-	39611	bmm	Dmel_CG5295	NP_001163445.1	553	brummer, isoform B
3L	NT_037436.4	14777195	14786078	-	39611	bmm	Dmel_CG5295	NP_648723.1	507	brummer, isoform A
3L	NT_037436.4	14786847	14789588	+	39612	Tdrd3	Dmel_CG13472	NP_648724.1	836	tudor domain containing 3
3L	NT_037436.4	14792131	14799235	+	39613	CG9425	Dmel_CG9425	NP_001261848.1	2103	CG9425, isoform C
3L	NT_037436.4	14792131	14799235	+	39613	CG9425	Dmel_CG9425	NP_648725.2	2103	CG9425, isoform D
3L	NT_037436.4	14792131	14799235	+	39613	CG9425	Dmel_CG9425	NP_996084.1	2103	CG9425, isoform B
3L	NT_037436.4	14801548	14802090	-	44005	NHP2	Dmel_CG5258	NP_651965.1	160	NHP2, isoform A
3L	NT_037436.4	14801548	14802090	-	44005	NHP2	Dmel_CG5258	NP_001261849.1	160	NHP2, isoform B
3L	NT_037436.4	14802479	14803259	-	39615	gnu	Dmel_CG5272	NP_648726.1	240	giant nuclei
3L	NT_037436.4	14864855	14881734	+	39616	CG17839	Dmel_CG17839	NP_996085.2	1656	uncharacterized protein Dmel_CG17839, isoform B
3L	NT_037436.4	14864855	14867649	+	39616	CG17839	Dmel_CG17839	NP_001036606.1	587	uncharacterized protein Dmel_CG17839, isoform C
3L	NT_037436.4	14893808	14894326	-	5740416	CG34245	Dmel_CG34245	NP_001189107.1	131	uncharacterized protein Dmel_CG34245
3L	NT_037436.4	14904237	14942178	+	39617	DCX-EMAP	Dmel_CG42247	NP_648728.2	1076	Doublecortin-domain-containing echinoderm-microtubule-associated protein, isoform C
3L	NT_037436.4	14904237	14942304	+	39617	DCX-EMAP	Dmel_CG42247	NP_001261850.1	1118	Doublecortin-domain-containing echinoderm-microtubule-associated protein, isoform G
3L	NT_037436.4	14926602	14942178	+	39617	DCX-EMAP	Dmel_CG42247	NP_001261851.1	851	Doublecortin-domain-containing echinoderm-microtubule-associated protein, isoform F
3L	NT_037436.4	14931752	14942178	+	39617	DCX-EMAP	Dmel_CG42247	NP_648729.1	819	Doublecortin-domain-containing echinoderm-microtubule-associated protein, isoform D
3L	NT_037436.4	14944056	14944292	-	50282	CG13465	Dmel_CG13465	NP_525000.1	78	uncharacterized protein Dmel_CG13465
3L	NT_037436.4	14945832	14946068	-	50281	BobA	Dmel_CG12487	NP_525087.2	78	brother of bearded A
3L	NT_037436.4	14969427	14969903	+	39619	Tom	Dmel_CG5185	NP_524073.2	158	twin of m4
3L	NT_037436.4	14972739	14972984	+	39620	Brd	Dmel_CG3096	NP_476889.1	81	bearded
3L	NT_037436.4	14975304	14975753	+	39621	Ocho	Dmel_CG3396	NP_536775.2	149	ocho, isoform B
3L	NT_037436.4	14975304	14975753	+	39621	Ocho	Dmel_CG3396	NP_001246759.1	149	ocho, isoform C
3L	NT_037436.4	14979638	14982343	+	39623	CG3349	Dmel_CG3349	NP_648730.2	766	CG3349
3L	NT_037436.4	14982935	14984424	+	39624	CG5114	Dmel_CG5114	NP_648731.1	425	CG5114, isoform A
3L	NT_037436.4	14982935	14984424	+	39624	CG5114	Dmel_CG5114	NP_001246760.1	445	CG5114, isoform B
3L	NT_037436.4	14987952	14991216	+	39625	mnd	Dmel_CG3297	NP_524074.1	499	minidiscs, isoform A
3L	NT_037436.4	14987952	14991216	+	39625	mnd	Dmel_CG3297	NP_730006.1	499	minidiscs, isoform C
3L	NT_037436.4	14987952	14991216	+	39625	mnd	Dmel_CG3297	NP_730005.3	499	minidiscs, isoform D
3L	NT_037436.4	14992472	14997494	+	39626	Zip71B	Dmel_CG10006	NP_001303364.1	572	Zinc/iron regulated transporter-related protein 71B, isoform C
3L	NT_037436.4	14992472	14997494	+	39626	Zip71B	Dmel_CG10006	NP_001097608.1	572	Zinc/iron regulated transporter-related protein 71B, isoform B
3L	NT_037436.4	14998059	14999609	-	39627	mRpL39	Dmel_CG17166	NP_524075.2	333	mitochondrial ribosomal protein L39
3L	NT_037436.4	15000068	15001221	+	39628	Prosbeta2	Dmel_CG3329	NP_524076.2	272	proteasome beta2 subunit
3L	NT_037436.4	15001822	15011520	-	39629	Reck	Dmel_CG5392	NP_648733.2	1071	Reversion-inducing-cysteine-rich protein with kazal motifs, isoform A
3L	NT_037436.4	15001822	15011520	-	39629	Reck	Dmel_CG5392	NP_001261853.1	1071	Reversion-inducing-cysteine-rich protein with kazal motifs, isoform B
3L	NT_037436.4	15016471	15019356	-	39630	Sytbeta	Dmel_CG42333	NP_648734.1	602	synaptotagmin beta, isoform D
3L	NT_037436.4	15016471	15048905	-	39630	Sytbeta	Dmel_CG42333	NP_652427.2	546	synaptotagmin beta, isoform C
3L	NT_037436.4	15023566	15023879	+	251924	CG32148	Dmel_CG32148	NP_730009.1	83	uncharacterized protein Dmel_CG32148
3L	NT_037436.4	15041716	15042504	-	2768973	Rpn12R	Dmel_CG11552	NP_996086.1	262	regulatory particle non-ATPase 12-related
3L	NT_037436.4	15042902	15043864	-	2768974	ind	Dmel_CG11551	NP_996087.2	320	intermediate neuroblasts defective
3L	NT_037436.4	15049208	15049462	-	14462860	CG43678	Dmel_CG43678	NP_001261854.1	84	uncharacterized protein Dmel_CG43678
3L	NT_037436.4	15049696	15050199	-	39633	CG18581	Dmel_CG18581	NP_648736.1	167	uncharacterized protein Dmel_CG18581
3L	NT_037436.4	15050421	15050765	-	39634	CG12310	Dmel_CG12310	NP_648737.1	114	uncharacterized protein Dmel_CG12310
3L	NT_037436.4	15051023	15051214	-	14462861	CG43679	Dmel_CG43679	NP_001261856.1	63	uncharacterized protein Dmel_CG43679, isoform B
3L	NT_037436.4	15051023	15051214	-	14462861	CG43679	Dmel_CG43679	NP_001261855.1	63	uncharacterized protein Dmel_CG43679, isoform A
3L	NT_037436.4	15052062	15052475	-	39635	CG13461	Dmel_CG13461	NP_648738.1	137	uncharacterized protein Dmel_CG13461
3L	NT_037436.4	15053146	15053295	-	14462862	CG43680	Dmel_CG43680	NP_001261857.1	49	uncharacterized protein Dmel_CG43680
3L	NT_037436.4	15053825	15054103	-	39636	CG18649	Dmel_CG18649	NP_001261858.1	92	uncharacterized protein Dmel_CG18649, isoform B
3L	NT_037436.4	15053825	15054103	-	39636	CG18649	Dmel_CG18649	NP_648739.2	92	uncharacterized protein Dmel_CG18649, isoform A
3L	NT_037436.4	15054822	15055457	+	39637	EAChm	Dmel_CG13463	NP_648740.1	211	enhancer of acetyltransferase chameau
3L	NT_037436.4	15061068	15061676	-	39638	CG13460	Dmel_CG13460	NP_648741.2	202	uncharacterized protein Dmel_CG13460
3L	NT_037436.4	15066672	15075847	-	3772382	Plp	Dmel_CG33957	NP_001261860.1	1757	Pericentrin-like protein, isoform H
3L	NT_037436.4	15066672	15072033	-	3772382	Plp	Dmel_CG33957	NP_001027573.1	1109	Pericentrin-like protein, isoform C
3L	NT_037436.4	15066672	15075847	-	3772382	Plp	Dmel_CG33957	NP_001261866.1	1701	Pericentrin-like protein, isoform O
3L	NT_037436.4	15066672	15088325	-	3772382	Plp	Dmel_CG33957	NP_001261859.1	2891	Pericentrin-like protein, isoform G
3L	NT_037436.4	15066672	15084102	-	3772382	Plp	Dmel_CG33957	NP_001246762.2	2730	Pericentrin-like protein, isoform P
3L	NT_037436.4	15066672	15089818	-	3772382	Plp	Dmel_CG33957	NP_001027574.2	2895	Pericentrin-like protein, isoform F
3L	NT_037436.4	15066672	15089818	-	3772382	Plp	Dmel_CG33957	NP_001246761.1	2767	Pericentrin-like protein, isoform D
3L	NT_037436.4	15066672	15084102	-	3772382	Plp	Dmel_CG33957	NP_001261861.1	2666	Pericentrin-like protein, isoform J
3L	NT_037436.4	15066672	15089818	-	3772382	Plp	Dmel_CG33957	NP_001261863.1	2839	Pericentrin-like protein, isoform L
3L	NT_037436.4	15066672	15084102	-	3772382	Plp	Dmel_CG33957	NP_001261865.1	2650	Pericentrin-like protein, isoform N
3L	NT_037436.4	15066672	15089818	-	3772382	Plp	Dmel_CG33957	NP_001261862.1	2831	Pericentrin-like protein, isoform K
3L	NT_037436.4	15066672	15084102	-	3772382	Plp	Dmel_CG33957	NP_001261864.1	2594	Pericentrin-like protein, isoform M
3L	NT_037436.4	15077203	15078447	-	39641	Or71a	Dmel_CG17871	NP_001246763.1	363	odorant receptor 71a, isoform D
3L	NT_037436.4	15077203	15078447	-	39641	Or71a	Dmel_CG17871	NP_524078.2	378	odorant receptor 71a, isoform B
3L	NT_037436.4	15091354	15093261	-	39643	sstn	Dmel_CG6945	NP_648745.1	635	stepping stone
3L	NT_037436.4	15095262	15097559	+	39644	GlyRS	Dmel_CG6778	NP_001261867.1	765	Glycyl-tRNA synthetase, isoform C
3L	NT_037436.4	15095262	15097559	+	39644	GlyRS	Dmel_CG6778	NP_730022.1	765	Glycyl-tRNA synthetase, isoform B
3L	NT_037436.4	15095520	15097559	+	39644	GlyRS	Dmel_CG6778	NP_648746.1	679	Glycyl-tRNA synthetase, isoform A
3L	NT_037436.4	15098351	15112697	+	39645	CTPsyn	Dmel_CG45070	NP_730023.1	627	CTP synthase, isoform A
3L	NT_037436.4	15098351	15112697	+	39645	CTPsyn	Dmel_CG45070	NP_001287067.1	627	CTP synthase, isoform C
3L	NT_037436.4	15108805	15112697	+	39645	CTPsyn	Dmel_CG45070	NP_648747.1	623	CTP synthase, isoform B
3L	NT_037436.4	15108805	15110529	+	19834908	CG45071	Dmel_CG45071	NP_730024.1	429	uncharacterized protein Dmel_CG45071, isoform A
3L	NT_037436.4	15108805	15110529	+	19834908	CG45071	Dmel_CG45071	NP_001287068.1	379	uncharacterized protein Dmel_CG45071, isoform B
3L	NT_037436.4	15113770	15116303	+	39646	CG13458	Dmel_CG13458	NP_648748.1	634	uncharacterized protein Dmel_CG13458
3L	NT_037436.4	15116861	15127906	+	39647	Cep135	Dmel_CG17081	NP_001189108.1	1065	centrosomal protein 135kDa, isoform B
3L	NT_037436.4	15116861	15127335	+	39647	Cep135	Dmel_CG17081	NP_001261869.1	960	centrosomal protein 135kDa, isoform C
3L	NT_037436.4	15116861	15127906	+	39647	Cep135	Dmel_CG17081	NP_648749.3	1059	centrosomal protein 135kDa, isoform A
3L	NT_037436.4	15120006	15123054	-	39648	CG16959	Dmel_CG16959	NP_001261870.1	489	uncharacterized protein Dmel_CG16959, isoform D
3L	NT_037436.4	15120006	15123054	-	39648	CG16959	Dmel_CG16959	NP_001189109.1	489	uncharacterized protein Dmel_CG16959, isoform C
3L	NT_037436.4	15120006	15123054	-	39648	CG16959	Dmel_CG16959	NP_001287069.1	489	uncharacterized protein Dmel_CG16959, isoform E
3L	NT_037436.4	15120213	15123054	-	39648	CG16959	Dmel_CG16959	NP_648750.1	503	uncharacterized protein Dmel_CG16959, isoform A
3L	NT_037436.4	15120213	15123054	-	39648	CG16959	Dmel_CG16959	NP_730025.1	503	uncharacterized protein Dmel_CG16959, isoform B
3L	NT_037436.4	15121622	15122116	+	318245	CG32847	Dmel_CG32847	NP_730026.1	164	uncharacterized protein Dmel_CG32847
3L	NT_037436.4	15128063	15131289	-	39649	CG13457	Dmel_CG13457	NP_648751.1	1023	uncharacterized protein Dmel_CG13457, isoform B
3L	NT_037436.4	15128063	15130936	-	39649	CG13457	Dmel_CG13457	NP_730028.1	922	uncharacterized protein Dmel_CG13457, isoform A
3L	NT_037436.4	15131805	15136300	-	39650	CG12316	Dmel_CG12316	NP_730030.1	1188	uncharacterized protein Dmel_CG12316, isoform B
3L	NT_037436.4	15131805	15136300	-	39650	CG12316	Dmel_CG12316	NP_648752.1	1188	uncharacterized protein Dmel_CG12316, isoform A
3L	NT_037436.4	15138188	15142453	-	39651	Pdi	Dmel_CG6988	NP_001287070.1	496	protein disulfide isomerase, isoform E
3L	NT_037436.4	15138188	15142453	-	39651	Pdi	Dmel_CG6988	NP_524079.1	496	protein disulfide isomerase, isoform A
3L	NT_037436.4	15143249	15144009	-	251690	CG32147	Dmel_CG32147	NP_730035.1	224	uncharacterized protein Dmel_CG32147
3L	NT_037436.4	15144782	15145939	+	39652	Pex3	Dmel_CG6859	NP_001261871.1	385	peroxin 3, isoform B
3L	NT_037436.4	15144782	15145939	+	39652	Pex3	Dmel_CG6859	NP_648753.1	385	peroxin 3, isoform A
3L	NT_037436.4	15150916	15153144	+	39653	FucTA	Dmel_CG6869	NP_648754.2	503	FucTA, isoform A
3L	NT_037436.4	15150916	15153144	+	39653	FucTA	Dmel_CG6869	NP_001261872.1	503	FucTA, isoform B
3L	NT_037436.4	15154665	15158487	-	39654	Msh6	Dmel_CG7003	NP_648755.1	1190	Msh6
3L	NT_037436.4	15159170	15160852	+	39655	Prp31	Dmel_CG6876	NP_648756.1	501	Pre-mRNA processing factor 31
3L	NT_037436.4	15160964	15163495	-	39657	CG7011	Dmel_CG7011	NP_648758.1	373	CG7011
3L	NT_037436.4	15162003	15162365	+	39656	CG6878	Dmel_CG6878	NP_648757.1	79	CG6878
3L	NT_037436.4	15207926	15208516	+	39658	CG6888	Dmel_CG6888	NP_648759.1	196	CG6888
3L	NT_037436.4	15236121	15240161	+	44497	Tollo	Dmel_CG6890	NP_524757.1	1346	tollo
3L	NT_037436.4	15298989	15300892	+	39660	Best4	Dmel_CG7259	NP_001097609.1	526	bestrophin 4
3L	NT_037436.4	15300956	15302740	-	39661	Best3	Dmel_CG12327	NP_730039.1	535	bestrophin 3
3L	NT_037436.4	15306558	15310389	+	39662	CG7255	Dmel_CG7255	NP_001034016.1	1063	CG7255, isoform F
3L	NT_037436.4	15306558	15311058	+	39662	CG7255	Dmel_CG7255	NP_996088.2	607	CG7255, isoform E
3L	NT_037436.4	15306558	15310389	+	39662	CG7255	Dmel_CG7255	NP_001036607.1	1063	CG7255, isoform H
3L	NT_037436.4	15306558	15311058	+	39662	CG7255	Dmel_CG7255	NP_001261873.1	607	CG7255, isoform I
3L	NT_037436.4	15306558	15311058	+	39662	CG7255	Dmel_CG7255	NP_001036608.1	607	CG7255, isoform G
3L	NT_037436.4	15337225	15341769	+	39663	Toll-6	Dmel_CG7250	NP_001246766.1	1514	Toll-6, isoform C
3L	NT_037436.4	15337225	15341769	+	39663	Toll-6	Dmel_CG7250	NP_524081.1	1514	Toll-6, isoform A
3L	NT_037436.4	15337225	15341769	+	39663	Toll-6	Dmel_CG7250	NP_001246765.1	1514	Toll-6, isoform B
3L	NT_037436.4	15407849	15408208	+	2768950	CG33259	Dmel_CG33259	NP_996090.1	119	uncharacterized protein Dmel_CG33259
3L	NT_037436.4	15472622	15473578	-	39665	CG7804	Dmel_CG7804	NP_001261874.1	318	CG7804, isoform B
3L	NT_037436.4	15472622	15473578	-	39665	CG7804	Dmel_CG7804	NP_648764.1	318	CG7804, isoform A
3L	NT_037436.4	15484705	15485358	-	39666	Ran-like	Dmel_CG7815	NP_524082.1	217	Ran-like
3L	NT_037436.4	15493053	15493328	-	2768954	CG12355	Dmel_CG12355	NP_001163447.1	91	uncharacterized protein Dmel_CG12355, isoform D
3L	NT_037436.4	15493053	15493328	-	2768954	CG12355	Dmel_CG12355	NP_996091.1	91	uncharacterized protein Dmel_CG12355, isoform A
3L	NT_037436.4	15493053	15494891	-	2768954	CG12355	Dmel_CG12355	NP_001261875.1	204	uncharacterized protein Dmel_CG12355, isoform E
3L	NT_037436.4	15493053	15494891	-	2768954	CG12355	Dmel_CG12355	NP_001097610.1	204	uncharacterized protein Dmel_CG12355, isoform B
3L	NT_037436.4	15496715	15497916	+	39667	CG13455	Dmel_CG13455	NP_648765.1	377	uncharacterized protein Dmel_CG13455
3L	NT_037436.4	15498246	15498761	+	39668	CG7276	Dmel_CG7276	NP_996092.1	171	CG7276
3L	NT_037436.4	15499060	15500508	+	39669	CG7275	Dmel_CG7275	NP_648767.1	446	CG7275
3L	NT_037436.4	15501091	15503418	+	39670	CG7272	Dmel_CG7272	NP_648768.1	228	CG7272
3L	NT_037436.4	15503814	15504813	-	39671	CG7857	Dmel_CG7857	NP_648769.2	312	CG7857
3L	NT_037436.4	15505889	15507850	-	39672	CG7841	Dmel_CG7841	NP_648770.1	174	CG7841, isoform A
3L	NT_037436.4	15505889	15507850	-	39672	CG7841	Dmel_CG7841	NP_001261876.1	174	CG7841, isoform B
3L	NT_037436.4	15509124	15509396	+	39673	Z600	Dmel_CG17962	NP_524083.2	90	Z600
3L	NT_037436.4	15509549	15509668	+	3771892	gdl-ORF39	Dmel_CG33755	NP_001027126.1	39	gdl-ORF39
3L	NT_037436.4	15509736	15510748	+	3771892	gdl-ORF39	Dmel_CG33755	NP_001287071.1	194	gonadal, isoform C
3L	NT_037436.4	15509736	15510748	+	3771892	gdl-ORF39	Dmel_CG33755	NP_001027127.1	194	gonadal, isoform A
3L	NT_037436.4	15509736	15510748	+	3771892	gdl-ORF39	Dmel_CG33755	NP_001261877.1	194	gonadal, isoform B
3L	NT_037436.4	15511119	15512369	+	39675	Eip71CD	Dmel_CG7266	NP_730048.1	82	Ecdysone-induced protein 28/29kD, isoform C
3L	NT_037436.4	15511119	15513075	+	39675	Eip71CD	Dmel_CG7266	NP_001261879.1	261	Ecdysone-induced protein 28/29kD, isoform G
3L	NT_037436.4	15511119	15513030	+	39675	Eip71CD	Dmel_CG7266	NP_524085.2	246	Ecdysone-induced protein 28/29kD, isoform A
3L	NT_037436.4	15511119	15513030	+	39675	Eip71CD	Dmel_CG7266	NP_730047.1	242	Ecdysone-induced protein 28/29kD, isoform B
3L	NT_037436.4	15511603	15513030	+	39675	Eip71CD	Dmel_CG7266	NP_996093.2	239	Ecdysone-induced protein 28/29kD, isoform E
3L	NT_037436.4	15512035	15513030	+	39675	Eip71CD	Dmel_CG7266	NP_001261878.1	245	Ecdysone-induced protein 28/29kD, isoform F
3L	NT_037436.4	15516688	15517026	-	39676	CG13454	Dmel_CG13454	NP_648771.1	112	uncharacterized protein Dmel_CG13454
3L	NT_037436.4	15517830	15518360	-	39677	mex1	Dmel_CG7936	NP_524086.1	83	midgut expression 1, isoform A
3L	NT_037436.4	15517830	15519509	-	39677	mex1	Dmel_CG7936	NP_001189110.1	83	midgut expression 1, isoform B
3L	NT_037436.4	15517830	15518360	-	39677	mex1	Dmel_CG7936	NP_001261880.1	83	midgut expression 1, isoform C
3L	NT_037436.4	15520620	15521648	+	39678	yellow-k	Dmel_CG7463	NP_648772.1	342	yellow-k
3L	NT_037436.4	15521819	15523717	-	39679	CG7945	Dmel_CG7945	NP_648773.1	248	CG7945, isoform B
3L	NT_037436.4	15521819	15523215	-	39679	CG7945	Dmel_CG7945	NP_730051.1	262	CG7945, isoform A
3L	NT_037436.4	15524332	15525223	-	3885638	CG33986	Dmel_CG33986	NP_001034017.2	277	uncharacterized protein Dmel_CG33986
3L	NT_037436.4	15525912	15526807	-	3885639	CG33985	Dmel_CG33985	NP_001034018.1	277	uncharacterized protein Dmel_CG33985
3L	NT_037436.4	15526951	15527508	-	3885667	CG42729	Dmel_CG42729	NP_001034019.2	185	uncharacterized protein Dmel_CG42729
3L	NT_037436.4	15527711	15528181	-	10178859	CG42728	Dmel_CG42728	NP_001189111.1	156	uncharacterized protein Dmel_CG42728
3L	NT_037436.4	15528357	15529230	-	39681	obst-H	Dmel_CG33983	NP_001034020.1	269	obstructor-H
3L	NT_037436.4	15530305	15530806	-	12797910	CG43248	Dmel_CG43248	NP_001246767.1	121	uncharacterized protein Dmel_CG43248, isoform A
3L	NT_037436.4	15530305	15530463	-	12797910	CG43248	Dmel_CG43248	NP_001261881.2	52	uncharacterized protein Dmel_CG43248, isoform D
3L	NT_037436.4	15536402	15551274	+	39682	CrebA	Dmel_CG7450	NP_524087.3	516	Cyclic-AMP response element binding protein A, isoform A
3L	NT_037436.4	15536402	15551274	+	39682	CrebA	Dmel_CG7450	NP_996096.1	516	Cyclic-AMP response element binding protein A, isoform B
3L	NT_037436.4	15554207	15560731	+	39683	AGO2	Dmel_CG7439	NP_648775.1	1214	argonaute 2, isoform B
3L	NT_037436.4	15554265	15560731	+	39683	AGO2	Dmel_CG7439	NP_730054.1	1217	argonaute 2, isoform C
3L	NT_037436.4	15557932	15560731	+	39683	AGO2	Dmel_CG7439	NP_001261882.1	787	argonaute 2, isoform E
3L	NT_037436.4	15561086	15562935	-	39684	CG7739	Dmel_CG7739	NP_648776.1	596	CG7739
3L	NT_037436.4	15563727	15565125	+	39685	SCCRO	Dmel_CG7427	NP_648777.1	288	squamous cell carcinoma-related oncogene ortholog, isoform A
3L	NT_037436.4	15563727	15565125	+	39685	SCCRO	Dmel_CG7427	NP_001261883.1	288	squamous cell carcinoma-related oncogene ortholog, isoform E
3L	NT_037436.4	15563899	15565125	+	39685	SCCRO	Dmel_CG7427	NP_001246770.1	297	squamous cell carcinoma-related oncogene ortholog, isoform C
3L	NT_037436.4	15564250	15565125	+	39685	SCCRO	Dmel_CG7427	NP_001246771.1	291	squamous cell carcinoma-related oncogene ortholog, isoform D
3L	NT_037436.4	15564250	15565125	+	39685	SCCRO	Dmel_CG7427	NP_001246769.1	291	squamous cell carcinoma-related oncogene ortholog, isoform B
3L	NT_037436.4	15568307	15575753	+	39686	dop	Dmel_CG6498	NP_001261884.1	2139	drop out, isoform B
3L	NT_037436.4	15568307	15575753	+	39686	dop	Dmel_CG6498	NP_648778.1	2139	drop out, isoform A
3L	NT_037436.4	15576664	15578546	+	39687	CG16979	Dmel_CG16979	NP_648779.1	607	uncharacterized protein Dmel_CG16979
3L	NT_037436.4	15578952	15580506	-	39688	mrn	Dmel_CG7764	NP_648780.1	499	marionette
3L	NT_037436.4	15580890	15583264	+	39689	CG12301	Dmel_CG12301	NP_648781.1	771	uncharacterized protein Dmel_CG12301
3L	NT_037436.4	15583735	15585299	+	39690	AIMP2	Dmel_CG12304	NP_996097.1	301	aaRS-interacting multifunctional protein 2, isoform B
3L	NT_037436.4	15583735	15585299	+	39690	AIMP2	Dmel_CG12304	NP_648782.2	334	aaRS-interacting multifunctional protein 2, isoform A
3L	NT_037436.4	15586202	15587565	-	39691	CG7656	Dmel_CG7656	NP_730059.1	317	CG7656, isoform A
3L	NT_037436.4	15586202	15587565	-	39691	CG7656	Dmel_CG7656	NP_648783.4	319	CG7656, isoform E
3L	NT_037436.4	15586202	15587565	-	39691	CG7656	Dmel_CG7656	NP_001261885.1	317	CG7656, isoform F
3L	NT_037436.4	15586202	15587565	-	39691	CG7656	Dmel_CG7656	NP_730058.2	319	CG7656, isoform D
3L	NT_037436.4	15589548	15604843	+	39693	RhoGAP71E	Dmel_CG32149	NP_001261886.1	301	Rho GTPase activating protein at 71E, isoform F
3L	NT_037436.4	15589548	15606680	+	39693	RhoGAP71E	Dmel_CG32149	NP_001137956.1	906	Rho GTPase activating protein at 71E, isoform D
3L	NT_037436.4	15589548	15602700	+	39693	RhoGAP71E	Dmel_CG32149	NP_730061.1	604	Rho GTPase activating protein at 71E, isoform B
3L	NT_037436.4	15589548	15607125	+	39693	RhoGAP71E	Dmel_CG32149	NP_001261887.1	454	Rho GTPase activating protein at 71E, isoform G
3L	NT_037436.4	15589548	15602557	+	39693	RhoGAP71E	Dmel_CG32149	NP_648784.1	606	Rho GTPase activating protein at 71E, isoform A
3L	NT_037436.4	15589548	15607125	+	39693	RhoGAP71E	Dmel_CG32149	NP_730060.1	896	Rho GTPase activating protein at 71E, isoform C
3L	NT_037436.4	15589548	15606676	+	39693	RhoGAP71E	Dmel_CG32149	NP_001189112.1	598	Rho GTPase activating protein at 71E, isoform E
3L	NT_037436.4	15609454	15610284	-	39694	CG7650	Dmel_CG7650	NP_648786.1	276	CG7650
3L	NT_037436.4	15610699	15611384	-	39695	CG13449	Dmel_CG13449	NP_001261888.1	208	uncharacterized protein Dmel_CG13449, isoform B
3L	NT_037436.4	15610699	15612828	-	39695	CG13449	Dmel_CG13449	NP_648787.2	570	uncharacterized protein Dmel_CG13449, isoform A
3L	NT_037436.4	15613304	15647617	-	39696	comm3	Dmel_CG42334	NP_648791.2	378	comm3, isoform C
3L	NT_037436.4	15613304	15632450	-	39696	comm3	Dmel_CG42334	NP_788509.1	423	comm3, isoform D
3L	NT_037436.4	15613304	15632450	-	39696	comm3	Dmel_CG42334	NP_001287072.1	423	comm3, isoform E
3L	NT_037436.4	15620038	15623011	+	39697	CG7372	Dmel_CG7372	NP_648789.3	971	CG7372
3L	NT_037436.4	15648576	15649093	+	12797911	CG43083	Dmel_CG43083	NP_001246772.1	130	uncharacterized protein Dmel_CG43083
3L	NT_037436.4	15649186	15649612	-	39700	Eig71Ea	Dmel_CG16931	NP_524088.2	100	Ecdysone-induced gene 71Ea
3L	NT_037436.4	15649984	15650405	+	39701	Eig71Eb	Dmel_CG7355	NP_524089.2	95	Ecdysone-induced gene 71Eb, isoform A
3L	NT_037436.4	15649984	15650405	+	39701	Eig71Eb	Dmel_CG7355	NP_001189113.1	95	Ecdysone-induced gene 71Eb, isoform B
3L	NT_037436.4	15650891	15651326	+	12797912	CG43084	Dmel_CG43084	NP_001246773.1	114	uncharacterized protein Dmel_CG43084
3L	NT_037436.4	15651557	15652215	-	39703	Eig71Ec	Dmel_CG7608	NP_524090.2	173	Ecdysone-induced gene 71Ec
3L	NT_037436.4	15652598	15653042	+	39704	Eig71Ed	Dmel_CG7350	NP_524091.1	99	Ecdysone-induced gene 71Ed
3L	NT_037436.4	15654596	15655986	-	39706	Eig71Ee	Dmel_CG7604	NP_524092.2	445	Ecdysone-induced gene 71Ee
3L	NT_037436.4	15656745	15657357	-	39707	Eig71Ef	Dmel_CG7599	NP_524093.2	98	Ecdysone-induced gene 71Ef
3L	NT_037436.4	15657665	15658070	+	39708	Eig71Eg	Dmel_CG7336	NP_524094.2	98	Ecdysone-induced gene 71Eg
3L	NT_037436.4	15659049	15659417	-	39709	Eig71Eh	Dmel_CG7594	NP_648794.3	101	Eig71Eh
3L	NT_037436.4	15659742	15660165	+	39710	Eig71Ei	Dmel_CG7327	NP_001261889.1	102	Eig71Ei, isoform B
3L	NT_037436.4	15659742	15660165	+	39710	Eig71Ei	Dmel_CG7327	NP_648795.2	102	Eig71Ei, isoform A
3L	NT_037436.4	15660643	15661003	-	39711	Eig71Ej	Dmel_CG7588	NP_648796.1	98	Eig71Ej
3L	NT_037436.4	15661272	15661682	+	39712	Eig71Ek	Dmel_CG7325	NP_648797.1	97	Eig71Ek
3L	NT_037436.4	15661867	15662279	+	12797913	CG43082	Dmel_CG43082	NP_001246774.1	97	uncharacterized protein Dmel_CG43082
3L	NT_037436.4	15679720	15681470	+	39713	CG7304	Dmel_CG7304	NP_996098.1	563	CG7304
3L	NT_037436.4	15681669	15683297	-	39714	CG7579	Dmel_CG7579	NP_648799.1	498	CG7579
3L	NT_037436.4	15683969	15686269	+	39715	pgant8	Dmel_CG7297	NP_648800.1	590	polypeptide GalNAc transferase 8
3L	NT_037436.4	15686422	15687632	-	5740876	CG34452	Dmel_CG34452	NP_001287073.1	318	uncharacterized protein Dmel_CG34452, isoform C
3L	NT_037436.4	15686422	15687632	-	5740876	CG34452	Dmel_CG34452	NP_001097611.2	318	uncharacterized protein Dmel_CG34452, isoform B
3L	NT_037436.4	15688774	15691894	-	5740612	CG34451	Dmel_CG34451	NP_001287074.1	253	uncharacterized protein Dmel_CG34451, isoform C
3L	NT_037436.4	15688774	15691894	-	5740612	CG34451	Dmel_CG34451	NP_001097612.2	253	uncharacterized protein Dmel_CG34451, isoform A
3L	NT_037436.4	15688774	15689420	-	5740612	CG34451	Dmel_CG34451	NP_001246775.1	166	uncharacterized protein Dmel_CG34451, isoform B
3L	NT_037436.4	15697889	15699661	-	39716	comm2	Dmel_CG7554	NP_648801.2	343	comm2
3L	NT_037436.4	15716534	15717686	+	8674113	CG42571	Dmel_CG42571	NP_001163448.2	292	uncharacterized protein Dmel_CG42571
3L	NT_037436.4	15717923	15720033	+	8674011	CG42570	Dmel_CG42570	NP_001163449.1	610	uncharacterized protein Dmel_CG42570, isoform A
3L	NT_037436.4	15717923	15720033	+	8674011	CG42570	Dmel_CG42570	NP_001261890.1	609	uncharacterized protein Dmel_CG42570, isoform B
3L	NT_037436.4	15722667	15728204	-	39717	comm	Dmel_CG17943	NP_524095.1	370	commissureless, isoform A
3L	NT_037436.4	15722667	15728204	-	39717	comm	Dmel_CG17943	NP_001261891.1	370	commissureless, isoform B
3L	NT_037436.4	15808418	15808719	+	2768962	CG6244	Dmel_CG6244	NP_996099.1	82	CG6244
3L	NT_037436.4	15809498	15809883	+	39719	CG13445	Dmel_CG13445	NP_648803.1	107	uncharacterized protein Dmel_CG13445
3L	NT_037436.4	15810704	15816276	-	39720	fwe	Dmel_CG6151	NP_648804.1	194	flower, isoform A
3L	NT_037436.4	15812208	15816276	-	39720	fwe	Dmel_CG6151	NP_730071.1	157	flower, isoform C
3L	NT_037436.4	15812759	15816276	-	39720	fwe	Dmel_CG6151	NP_730072.1	192	flower, isoform B
3L	NT_037436.4	15817048	15818338	+	39721	CkIIalpha-i1	Dmel_CG6215	NP_524096.2	410	CKII-alpha subunit interactor-1
3L	NT_037436.4	15821445	15823417	-	39722	DCP2	Dmel_CG6169	NP_730074.2	564	decapping protein 2, isoform B
3L	NT_037436.4	15821445	15823417	-	39722	DCP2	Dmel_CG6169	NP_001014585.1	564	decapping protein 2, isoform D
3L	NT_037436.4	15821445	15825579	-	39722	DCP2	Dmel_CG6169	NP_001246776.1	792	decapping protein 2, isoform E
3L	NT_037436.4	15821445	15825579	-	39722	DCP2	Dmel_CG6169	NP_648805.2	791	decapping protein 2, isoform A
3L	NT_037436.4	15828003	15830603	+	53556	dbo	Dmel_CG6224	NP_001261892.1	620	diablo, isoform B
3L	NT_037436.4	15828003	15830492	+	53556	dbo	Dmel_CG6224	NP_524989.2	623	diablo, isoform A
3L	NT_037436.4	15832528	15833650	+	39724	CG12713	Dmel_CG12713	NP_648806.1	329	uncharacterized protein Dmel_CG12713
3L	NT_037436.4	15834362	15834877	-	39725	CG18081	Dmel_CG18081	NP_001261893.1	77	uncharacterized protein Dmel_CG18081, isoform C
3L	NT_037436.4	15834362	15834877	-	39725	CG18081	Dmel_CG18081	NP_648807.1	77	uncharacterized protein Dmel_CG18081, isoform A
3L	NT_037436.4	15834362	15834877	-	39725	CG18081	Dmel_CG18081	NP_001246777.1	77	uncharacterized protein Dmel_CG18081, isoform B
3L	NT_037436.4	15836159	15836923	-	39726	CG15715	Dmel_CG15715	NP_001246778.1	77	uncharacterized protein Dmel_CG15715, isoform B
3L	NT_037436.4	15836159	15836923	-	39726	CG15715	Dmel_CG15715	NP_648808.1	77	uncharacterized protein Dmel_CG15715, isoform A
3L	NT_037436.4	15837838	15841085	-	39727	CG32150	Dmel_CG32150	NP_730077.1	524	uncharacterized protein Dmel_CG32150, isoform A
3L	NT_037436.4	15837838	15841085	-	39727	CG32150	Dmel_CG32150	NP_001246779.1	524	uncharacterized protein Dmel_CG32150, isoform C
3L	NT_037436.4	15838727	15841085	-	39727	CG32150	Dmel_CG32150	NP_001246780.1	179	uncharacterized protein Dmel_CG32150, isoform D
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261898.1	978	pH-sensitive chloride channel, isoform N
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261897.1	954	pH-sensitive chloride channel, isoform M
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261894.1	772	pH-sensitive chloride channel, isoform J
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001246782.1	754	pH-sensitive chloride channel, isoform I
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001246781.1	762	pH-sensitive chloride channel, isoform H
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261895.1	746	pH-sensitive chloride channel, isoform K
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001287075.1	747	pH-sensitive chloride channel, isoform Q
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261896.1	747	pH-sensitive chloride channel, isoform L
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001034025.2	762	pH-sensitive chloride channel, isoform E
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001287076.1	762	pH-sensitive chloride channel, isoform R
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001034024.2	779	pH-sensitive chloride channel, isoform F
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261900.1	754	pH-sensitive chloride channel, isoform P
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001034023.2	737	pH-sensitive chloride channel, isoform D
3L	NT_037436.4	15851752	15870797	-	39730	pHCl	Dmel_CG44099	NP_001261899.1	929	pH-sensitive chloride channel, isoform O
3L	NT_037436.4	15852680	15870797	-	39730	pHCl	Dmel_CG44099	NP_001163450.1	681	pH-sensitive chloride channel, isoform G
3L	NT_037436.4	15864348	15870797	-	39730	pHCl	Dmel_CG44099	NP_001034026.1	637	pH-sensitive chloride channel, isoform C
3L	NT_037436.4	15903370	15911241	-	39732	sff	Dmel_CG6114	NP_001261902.1	851	sugar-free frosting, isoform C
3L	NT_037436.4	15903370	15911241	-	39732	sff	Dmel_CG6114	NP_001261901.1	845	sugar-free frosting, isoform B
3L	NT_037436.4	15903370	15911241	-	39732	sff	Dmel_CG6114	NP_648814.3	861	sugar-free frosting, isoform A
3L	NT_037436.4	15926211	15954756	-	39733	Pka-C3	Dmel_CG6117	NP_730083.2	583	protein kinase, cAMP-dependent, catalytic subunit 3, isoform B
3L	NT_037436.4	15926211	15947499	-	39733	Pka-C3	Dmel_CG6117	NP_524097.2	500	protein kinase, cAMP-dependent, catalytic subunit 3, isoform A
3L	NT_037436.4	15955220	15955391	+	39734	GXIVsPLA2	Dmel_CG17035	NP_001137957.1	32	GXIVsPLA2, isoform C
3L	NT_037436.4	15955220	15956053	+	39734	GXIVsPLA2	Dmel_CG17035	NP_001261903.1	230	GXIVsPLA2, isoform D
3L	NT_037436.4	15955220	15956053	+	39734	GXIVsPLA2	Dmel_CG17035	NP_648815.1	230	GXIVsPLA2, isoform A
3L	NT_037436.4	15956750	15957970	+	39735	elgi	Dmel_CG17033	NP_648816.1	315	early girl, isoform A
3L	NT_037436.4	15956750	15957970	+	39735	elgi	Dmel_CG17033	NP_001261904.1	315	early girl, isoform B
3L	NT_037436.4	15959266	15960508	+	39736	CG17032	Dmel_CG17032	NP_648817.1	312	uncharacterized protein Dmel_CG17032, isoform A
3L	NT_037436.4	15959266	15960508	+	39736	CG17032	Dmel_CG17032	NP_001261905.1	312	uncharacterized protein Dmel_CG17032, isoform B
3L	NT_037436.4	15960994	15967752	-	39737	l(3)72Ab	Dmel_CG5931	NP_648818.3	2142	lethal (3) 72Ab
3L	NT_037436.4	15968370	15969768	+	39738	CG10516	Dmel_CG10516	NP_648819.2	342	uncharacterized protein Dmel_CG10516
3L	NT_037436.4	15970317	15982508	-	39744	brm	Dmel_CG5942	NP_001261906.1	1658	brahma, isoform E
3L	NT_037436.4	15970377	15982508	-	39744	brm	Dmel_CG5942	NP_730088.1	1634	brahma, isoform D
3L	NT_037436.4	15970377	15982508	-	39744	brm	Dmel_CG5942	NP_536746.1	1638	brahma, isoform A
3L	NT_037436.4	15970377	15982508	-	39744	brm	Dmel_CG5942	NP_001261907.1	1642	brahma, isoform F
3L	NT_037436.4	15970377	15982508	-	39744	brm	Dmel_CG5942	NP_730089.1	1638	brahma, isoform B
3L	NT_037436.4	15970377	15982508	-	39744	brm	Dmel_CG5942	NP_536745.4	1634	brahma, isoform C
3L	NT_037436.4	15975458	15976369	+	39739	CG17026	Dmel_CG17026	NP_648820.1	284	uncharacterized protein Dmel_CG17026
3L	NT_037436.4	15977076	15978329	+	39740	CG17029	Dmel_CG17029	NP_001261908.1	284	uncharacterized protein Dmel_CG17029, isoform B
3L	NT_037436.4	15977076	15978329	+	39740	CG17029	Dmel_CG17029	NP_648821.1	284	uncharacterized protein Dmel_CG17029, isoform A
3L	NT_037436.4	15978543	15979738	+	39741	CG17028	Dmel_CG17028	NP_648822.1	284	uncharacterized protein Dmel_CG17028, isoform A
3L	NT_037436.4	15978543	15979738	+	39741	CG17028	Dmel_CG17028	NP_001189114.1	284	uncharacterized protein Dmel_CG17028, isoform B
3L	NT_037436.4	15980370	15981467	+	39742	CG17027	Dmel_CG17027	NP_648823.1	288	uncharacterized protein Dmel_CG17027, isoform A
3L	NT_037436.4	15980370	15981467	+	39742	CG17027	Dmel_CG17027	NP_001261909.1	288	uncharacterized protein Dmel_CG17027, isoform B
3L	NT_037436.4	15983277	15984184	+	39745	Arl1	Dmel_CG6025	NP_524098.2	180	ADP ribosylation factor-like 1
3L	NT_037436.4	15984386	15987718	-	39746	DNApol-delta	Dmel_CG5949	NP_524099.2	1092	DNA-polymerase-delta
3L	NT_037436.4	15988625	15990857	+	39747	Hip14	Dmel_CG6017	NP_001261911.1	637	Huntingtin-interacting protein 14, isoform C
3L	NT_037436.4	15988625	15990911	+	39747	Hip14	Dmel_CG6017	NP_001261910.1	655	Huntingtin-interacting protein 14, isoform B
3L	NT_037436.4	15988625	15990857	+	39747	Hip14	Dmel_CG6017	NP_648824.1	637	Huntingtin-interacting protein 14, isoform A
3L	NT_037436.4	15994731	16003980	-	39748	CG5830	Dmel_CG5830	NP_001261912.1	352	CG5830, isoform B
3L	NT_037436.4	15994731	16003980	-	39748	CG5830	Dmel_CG5830	NP_648825.1	329	CG5830, isoform A
3L	NT_037436.4	16005290	16006550	+	39749	mRpS31	Dmel_CG5904	NP_524100.1	376	mitochondrial ribosomal protein S31
3L	NT_037436.4	16006733	16010276	-	39750	mib1	Dmel_CG5841	NP_001261913.1	1115	mind bomb 1, isoform B
3L	NT_037436.4	16006733	16011648	-	39750	mib1	Dmel_CG5841	NP_648826.2	1226	mind bomb 1, isoform A
3L	NT_037436.4	16023845	16031341	+	39751	Notum	Dmel_CG13076	NP_730096.2	671	notum
3L	NT_037436.4	16032811	16033157	-	10178897	CG42717	Dmel_CG42717	NP_001189115.1	96	uncharacterized protein Dmel_CG42717
3L	NT_037436.4	16033778	16034139	+	10178784	CG42716	Dmel_CG42716	NP_001189116.1	97	uncharacterized protein Dmel_CG42716
3L	NT_037436.4	16034524	16034853	+	8673985	CG42538	Dmel_CG42538	NP_001163451.1	89	uncharacterized protein Dmel_CG42538
3L	NT_037436.4	16035570	16037162	+	39752	CG5895	Dmel_CG5895	NP_648828.3	453	CG5895, isoform A
3L	NT_037436.4	16035921	16037162	+	39752	CG5895	Dmel_CG5895	NP_001163452.2	368	CG5895, isoform C
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_524101.2	438	Death-associated inhibitor of apoptosis 1, isoform A
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_001261917.1	438	Death-associated inhibitor of apoptosis 1, isoform E
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_001261916.1	438	Death-associated inhibitor of apoptosis 1, isoform D
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_730097.1	438	Death-associated inhibitor of apoptosis 1, isoform B
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_001261918.1	438	Death-associated inhibitor of apoptosis 1, isoform F
3L	NT_037436.4	16038672	16039988	-	39753	Diap1	Dmel_CG12284	NP_730098.1	438	Death-associated inhibitor of apoptosis 1, isoform C
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_730101.2	1101	myosin binding subunit, isoform J
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001246784.1	1243	myosin binding subunit, isoform M
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001097615.1	925	myosin binding subunit, isoform H
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001246783.1	1230	myosin binding subunit, isoform L
3L	NT_037436.4	16053306	16078936	+	49070	Mbs	Dmel_CG32156	NP_001261919.1	1111	myosin binding subunit, isoform Q
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_730100.2	860	myosin binding subunit, isoform K
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001246785.1	1245	myosin binding subunit, isoform N
3L	NT_037436.4	16053306	16063315	+	49070	Mbs	Dmel_CG32156	NP_001246787.1	341	myosin binding subunit, isoform P
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_730099.2	1144	myosin binding subunit, isoform I
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001097614.1	795	myosin binding subunit, isoform G
3L	NT_037436.4	16053306	16080845	+	49070	Mbs	Dmel_CG32156	NP_001246786.1	1273	myosin binding subunit, isoform O
3L	NT_037436.4	16075488	16080845	+	49070	Mbs	Dmel_CG32156	NP_001097613.1	367	myosin binding subunit, isoform F
3L	NT_037436.4	16075488	16078936	+	49070	Mbs	Dmel_CG32156	NP_648830.1	377	myosin binding subunit, isoform E
3L	NT_037436.4	16082592	16083474	+	3885664	CG33258	Dmel_CG33258	NP_001034027.2	252	uncharacterized protein Dmel_CG33258, isoform B
3L	NT_037436.4	16082592	16083474	+	3885664	CG33258	Dmel_CG33258	NP_001303413.1	252	uncharacterized protein Dmel_CG33258, isoform C
3L	NT_037436.4	16084036	16085178	+	39756	CG13075	Dmel_CG13075	NP_648831.1	339	uncharacterized protein Dmel_CG13075
3L	NT_037436.4	16086197	16087440	-	39757	Tasp1	Dmel_CG5241	NP_648832.1	365	taspase 1, isoform A
3L	NT_037436.4	16086197	16087440	-	39757	Tasp1	Dmel_CG5241	NP_001261920.1	365	taspase 1, isoform B
3L	NT_037436.4	16088101	16090252	-	39758	CG5235	Dmel_CG5235	NP_001261921.1	698	CG5235, isoform B
3L	NT_037436.4	16088101	16090252	-	39758	CG5235	Dmel_CG5235	NP_648833.1	698	CG5235, isoform A
3L	NT_037436.4	16090832	16095196	+	39759	ClC-c	Dmel_CG5284	NP_730105.3	893	chloride channel-c, isoform C
3L	NT_037436.4	16090832	16095196	+	39759	ClC-c	Dmel_CG5284	NP_001261922.1	893	chloride channel-c, isoform D
3L	NT_037436.4	16091642	16095196	+	39759	ClC-c	Dmel_CG5284	NP_648834.1	822	chloride channel-c, isoform B
3L	NT_037436.4	16095941	16097489	-	39760	CG13074	Dmel_CG13074	NP_648835.1	451	uncharacterized protein Dmel_CG13074
3L	NT_037436.4	16097904	16099991	+	39761	ATPsynbetaL	Dmel_CG5389	NP_648836.2	622	ATP synthase, beta subunit-like
3L	NT_037436.4	16100305	16103433	+	39762	IleRS-m	Dmel_CG5414	NP_648837.2	941	Isoleucyl-tRNA synthetase, mitochondrial
3L	NT_037436.4	16103481	16105563	-	39763	IntS9	Dmel_CG5222	NP_648838.3	654	integrator 9
3L	NT_037436.4	16105852	16106428	+	12797916	CG43295	Dmel_CG43295	NP_001246788.1	167	uncharacterized protein Dmel_CG43295
3L	NT_037436.4	16106954	16111869	-	39764	Zn72D	Dmel_CG5215	NP_001261926.1	884	Zinc-finger protein at 72D, isoform D
3L	NT_037436.4	16106954	16111869	-	39764	Zn72D	Dmel_CG5215	NP_001261925.1	884	Zinc-finger protein at 72D, isoform C
3L	NT_037436.4	16106954	16111869	-	39764	Zn72D	Dmel_CG5215	NP_001261924.1	884	Zinc-finger protein at 72D, isoform F
3L	NT_037436.4	16106954	16111869	-	39764	Zn72D	Dmel_CG5215	NP_788510.1	884	Zinc-finger protein at 72D, isoform B
3L	NT_037436.4	16109035	16111869	-	39764	Zn72D	Dmel_CG5215	NP_648839.1	635	Zinc-finger protein at 72D, isoform A
3L	NT_037436.4	16109614	16111869	-	39764	Zn72D	Dmel_CG5215	NP_001261923.1	631	Zinc-finger protein at 72D, isoform E
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_001137958.1	1088	TBP-associated factor 4, isoform E
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_001261927.1	962	TBP-associated factor 4, isoform G
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_001163453.1	921	TBP-associated factor 4, isoform F
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_524102.1	921	TBP-associated factor 4, isoform A
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_730109.1	921	TBP-associated factor 4, isoform B
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_788511.1	851	TBP-associated factor 4, isoform C
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_001287077.1	921	TBP-associated factor 4, isoform I
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_996101.1	851	TBP-associated factor 4, isoform D
3L	NT_037436.4	16114472	16120072	+	39765	Taf4	Dmel_CG5444	NP_001261928.1	1047	TBP-associated factor 4, isoform H
3L	NT_037436.4	16122187	16125999	+	39766	Strumpellin	Dmel_CG12272	NP_001261929.1	1167	strumpellin, isoform C
3L	NT_037436.4	16122187	16125999	+	39766	Strumpellin	Dmel_CG12272	NP_648840.1	1191	strumpellin, isoform A
3L	NT_037436.4	16122187	16125999	+	39766	Strumpellin	Dmel_CG12272	NP_001163454.1	1191	strumpellin, isoform B
3L	NT_037436.4	16126137	16128490	-	44010	Pgm	Dmel_CG5165	NP_524675.1	560	phosphoglucose mutase
3L	NT_037436.4	16129909	16130703	+	39768	SsRbeta	Dmel_CG5474	NP_524103.2	190	signal sequence receptor beta
3L	NT_037436.4	16131106	16131582	-	39769	Trs20	Dmel_CG5161	NP_648841.1	139	TRAPP subunit 20
3L	NT_037436.4	16132514	16136466	+	39770	elg1	Dmel_CG16838	NP_996103.1	1162	enhanced level of genomic instability 1, isoform C
3L	NT_037436.4	16132682	16136466	+	39770	elg1	Dmel_CG16838	NP_996102.1	1106	enhanced level of genomic instability 1, isoform D
3L	NT_037436.4	16132682	16136466	+	39770	elg1	Dmel_CG16838	NP_001246789.1	1106	enhanced level of genomic instability 1, isoform E
3L	NT_037436.4	16136702	16137061	-	39771	CG5157	Dmel_CG5157	NP_648843.1	119	CG5157
3L	NT_037436.4	16140461	16142128	-	317885	CG32152	Dmel_CG32152	NP_001287078.1	493	CG5151, isoform F
3L	NT_037436.4	16140461	16142128	-	317885	CG32152	Dmel_CG32152	NP_996104.2	493	CG5151, isoform C
3L	NT_037436.4	16140461	16142128	-	317885	CG32152	Dmel_CG32152	NP_648844.1	493	CG5151, isoform D
3L	NT_037436.4	16140461	16142128	-	317885	CG32152	Dmel_CG32152	NP_001246790.1	493	CG5151, isoform E
3L	NT_037436.4	16142202	16143275	-	317885	CG32152	Dmel_CG32152	NP_730116.2	357	uncharacterized protein Dmel_CG32152, isoform B
3L	NT_037436.4	16142202	16143275	-	317885	CG32152	Dmel_CG32152	NP_001287079.1	357	uncharacterized protein Dmel_CG32152, isoform C
3L	NT_037436.4	16169455	16170106	-	3771914	CG33796	Dmel_CG33796	NP_001027128.1	179	uncharacterized protein Dmel_CG33796
3L	NT_037436.4	16170729	16171380	-	3772625	CG33795	Dmel_CG33795	NP_001027129.2	178	uncharacterized protein Dmel_CG33795
3L	NT_037436.4	16197868	16198570	+	3772322	CG33687	Dmel_CG33687	NP_001027130.2	169	uncharacterized protein Dmel_CG33687
3L	NT_037436.4	16199220	16199926	+	3772065	CG33688	Dmel_CG33688	NP_001027131.1	175	uncharacterized protein Dmel_CG33688
3L	NT_037436.4	16200229	16200926	+	3771798	CG33689	Dmel_CG33689	NP_001027132.2	178	uncharacterized protein Dmel_CG33689
3L	NT_037436.4	16201328	16202032	+	3772513	CG33690	Dmel_CG33690	NP_001027133.1	170	uncharacterized protein Dmel_CG33690
3L	NT_037436.4	16213051	16214106	-	39773	CG13073	Dmel_CG13073	NP_648845.1	351	uncharacterized protein Dmel_CG13073
3L	NT_037436.4	16226239	16228627	-	39774	l(3)72Dn	Dmel_CG5018	NP_648846.2	696	lethal (3) 72Dn, isoform A
3L	NT_037436.4	16226239	16228627	-	39774	l(3)72Dn	Dmel_CG5018	NP_001261930.1	699	lethal (3) 72Dn, isoform B
3L	NT_037436.4	16229301	16230771	+	39775	CG5027	Dmel_CG5027	NP_648847.3	430	CG5027
3L	NT_037436.4	16231193	16231902	-	39776	PDCD-5	Dmel_CG13072	NP_648848.1	133	programmed cell death 5
3L	NT_037436.4	16232202	16232659	+	39777	MED10	Dmel_CG5057	NP_001261931.1	133	mediator complex subunit 10, isoform C
3L	NT_037436.4	16232202	16232659	+	39777	MED10	Dmel_CG5057	NP_648849.3	133	mediator complex subunit 10, isoform B
3L	NT_037436.4	16233196	16234030	+	5740624	Hsc20	Dmel_CG34246	NP_001097616.1	240	heat shock protein cognate 20
3L	NT_037436.4	16234777	16236241	+	317887	l(3)72Dp	Dmel_CG32155	NP_730119.1	373	lethal (3) 72Dp
3L	NT_037436.4	16237758	16239397	+	39778	l(3)72Dr	Dmel_CG32154	NP_730120.1	345	lethal (3) 72Dr
3L	NT_037436.4	16251120	16252049	-	39779	CG13055	Dmel_CG13055	NP_648851.1	309	uncharacterized protein Dmel_CG13055, isoform A
3L	NT_037436.4	16251120	16252049	-	39779	CG13055	Dmel_CG13055	NP_001261932.1	309	uncharacterized protein Dmel_CG13055, isoform B
3L	NT_037436.4	16256091	16257035	-	39780	CG13054	Dmel_CG13054	NP_648852.1	314	uncharacterized protein Dmel_CG13054
3L	NT_037436.4	16259085	16259426	-	50274	CG13053	Dmel_CG13053	NP_001261933.1	91	uncharacterized protein Dmel_CG13053, isoform B
3L	NT_037436.4	16259085	16259426	-	50274	CG13053	Dmel_CG13053	NP_652421.1	91	uncharacterized protein Dmel_CG13053, isoform A
3L	NT_037436.4	16261257	16261576	-	5740480	CG34247	Dmel_CG34247	NP_001097617.1	83	uncharacterized protein Dmel_CG34247
3L	NT_037436.4	16262837	16263120	+	39781	CG13071	Dmel_CG13071	NP_001189117.1	69	uncharacterized protein Dmel_CG13071
3L	NT_037436.4	16263372	16264071	+	39782	CG13070	Dmel_CG13070	NP_648854.2	152	uncharacterized protein Dmel_CG13070
3L	NT_037436.4	16264814	16265065	-	5740583	CG13051	Dmel_CG13051	NP_001097618.1	83	uncharacterized protein Dmel_CG13051
3L	NT_037436.4	16265430	16265723	+	50271	CG13069	Dmel_CG13069	NP_652418.1	97	uncharacterized protein Dmel_CG13069
3L	NT_037436.4	16266417	16268141	-	39783	CG4950	Dmel_CG4950	NP_001261934.1	574	CG4950, isoform C
3L	NT_037436.4	16266417	16268141	-	39783	CG4950	Dmel_CG4950	NP_648855.2	574	CG4950, isoform B
3L	NT_037436.4	16269435	16269834	+	39784	CG13068	Dmel_CG13068	NP_648856.1	109	uncharacterized protein Dmel_CG13068
3L	NT_037436.4	16270502	16270862	-	5740883	CG34248	Dmel_CG34248	NP_001189118.1	92	uncharacterized protein Dmel_CG34248, isoform B
3L	NT_037436.4	16270502	16270798	-	5740883	CG34248	Dmel_CG34248	NP_001097619.1	98	uncharacterized protein Dmel_CG34248, isoform A
3L	NT_037436.4	16271340	16271652	+	39785	CG13067	Dmel_CG13067	NP_648857.1	79	uncharacterized protein Dmel_CG13067
3L	NT_037436.4	16272967	16273447	+	50270	CG13066	Dmel_CG13066	NP_652417.2	93	uncharacterized protein Dmel_CG13066
3L	NT_037436.4	16277487	16277978	+	39786	CG13065	Dmel_CG13065	NP_648858.1	140	uncharacterized protein Dmel_CG13065
3L	NT_037436.4	16278658	16279209	-	39787	CG13050	Dmel_CG13050	NP_648859.1	143	uncharacterized protein Dmel_CG13050
3L	NT_037436.4	16280479	16280805	+	2768963	CG13064	Dmel_CG13064	NP_996106.1	87	uncharacterized protein Dmel_CG13064
3L	NT_037436.4	16281258	16281866	-	39788	CG13049	Dmel_CG13049	NP_730133.1	181	uncharacterized protein Dmel_CG13049
3L	NT_037436.4	16282978	16283657	-	39789	CG13048	Dmel_CG13048	NP_648861.1	206	uncharacterized protein Dmel_CG13048, isoform A
3L	NT_037436.4	16282978	16283657	-	39789	CG13048	Dmel_CG13048	NP_001261935.1	206	uncharacterized protein Dmel_CG13048, isoform B
3L	NT_037436.4	16284765	16285355	-	39790	CG13047	Dmel_CG13047	NP_648862.2	170	uncharacterized protein Dmel_CG13047
3L	NT_037436.4	16287715	16288322	-	39791	CG13046	Dmel_CG13046	NP_648863.2	181	uncharacterized protein Dmel_CG13046
3L	NT_037436.4	16290234	16290797	-	39792	CG13045	Dmel_CG13045	NP_648864.1	187	uncharacterized protein Dmel_CG13045
3L	NT_037436.4	16295049	16295483	-	39793	CG4962	Dmel_CG4962	NP_648865.1	123	CG4962
3L	NT_037436.4	16301484	16301888	+	39794	CG4982	Dmel_CG4982	NP_648866.1	113	CG4982
3L	NT_037436.4	16302581	16303113	-	39795	CG13044	Dmel_CG13044	NP_648867.1	155	uncharacterized protein Dmel_CG13044
3L	NT_037436.4	16304300	16304590	+	12797917	CG43249	Dmel_CG43249	NP_001246791.1	77	uncharacterized protein Dmel_CG43249
3L	NT_037436.4	16305345	16305791	-	39796	CG13043	Dmel_CG13043	NP_648868.2	148	uncharacterized protein Dmel_CG13043
3L	NT_037436.4	16306647	16307098	+	39797	CG13063	Dmel_CG13063	NP_648869.1	129	uncharacterized protein Dmel_CG13063
3L	NT_037436.4	16307998	16308415	-	39798	CG13042	Dmel_CG13042	NP_648870.1	117	uncharacterized protein Dmel_CG13042
3L	NT_037436.4	16314527	16314947	+	39799	CG13062	Dmel_CG13062	NP_648871.3	118	uncharacterized protein Dmel_CG13062
3L	NT_037436.4	16318058	16318459	+	59235	Nplp3	Dmel_CG13061	NP_652710.1	90	Neuropeptide-like precursor 3
3L	NT_037436.4	16319025	16319459	-	39801	CG13041	Dmel_CG13041	NP_648872.1	124	uncharacterized protein Dmel_CG13041
3L	NT_037436.4	16319926	16320381	+	39802	CG13060	Dmel_CG13060	NP_648873.1	131	uncharacterized protein Dmel_CG13060
3L	NT_037436.4	16320888	16321219	-	10178940	CG42718	Dmel_CG42718	NP_001189119.1	79	uncharacterized protein Dmel_CG42718
3L	NT_037436.4	16323731	16324263	+	39803	CG13059	Dmel_CG13059	NP_648874.2	155	uncharacterized protein Dmel_CG13059
3L	NT_037436.4	16325146	16325768	-	39804	CG13040	Dmel_CG13040	NP_001261936.1	185	uncharacterized protein Dmel_CG13040, isoform B
3L	NT_037436.4	16325146	16325768	-	39804	CG13040	Dmel_CG13040	NP_648875.1	185	uncharacterized protein Dmel_CG13040, isoform A
3L	NT_037436.4	16326307	16326681	-	39805	CG13039	Dmel_CG13039	NP_648876.1	124	uncharacterized protein Dmel_CG13039
3L	NT_037436.4	16327317	16327728	-	50268	CG13038	Dmel_CG13038	NP_652415.2	94	uncharacterized protein Dmel_CG13038
3L	NT_037436.4	16328868	16329402	+	39806	CG13058	Dmel_CG13058	NP_648877.1	148	uncharacterized protein Dmel_CG13058
3L	NT_037436.4	16329858	16330871	+	318838	CG33061	Dmel_CG33061	NP_001097620.1	282	uncharacterized protein Dmel_CG33061, isoform B
3L	NT_037436.4	16329858	16330293	+	318838	CG33061	Dmel_CG33061	NP_001261937.1	116	uncharacterized protein Dmel_CG33061, isoform C
3L	NT_037436.4	16331402	16331767	+	39807	CG33060	Dmel_CG33060	NP_788513.2	121	uncharacterized protein Dmel_CG33060
3L	NT_037436.4	16331980	16332614	+	53564	retinin	Dmel_CG13057	NP_524995.2	191	retinin
3L	NT_037436.4	16333335	16333702	+	50267	CG13056	Dmel_CG13056	NP_652414.2	99	uncharacterized protein Dmel_CG13056
3L	NT_037436.4	16340444	16344761	+	39808	CG4998	Dmel_CG4998	NP_001036609.1	1185	CG4998, isoform B
3L	NT_037436.4	16340444	16344761	+	39808	CG4998	Dmel_CG4998	NP_648878.1	891	CG4998, isoform A
3L	NT_037436.4	16346323	16347620	+	2768960	CG33257	Dmel_CG33257	NP_996107.1	330	uncharacterized protein Dmel_CG33257
3L	NT_037436.4	16348167	16348733	+	39809	mRpS34	Dmel_CG42648	NP_524104.2	188	mitochondrial ribosomal protein S34
3L	NT_037436.4	16348863	16351839	-	39810	Golgin104	Dmel_CG4925	NP_648879.1	776	golgin 104
3L	NT_037436.4	16352054	16353213	+	39811	Tcs3	Dmel_CG4933	NP_648880.1	347	Tcs3
3L	NT_037436.4	16353325	16354281	-	39812	Pdh	Dmel_CG4899	NP_524105.2	278	photoreceptor dehydrogenase, isoform A
3L	NT_037436.4	16353325	16354230	-	39812	Pdh	Dmel_CG4899	NP_001137959.1	261	photoreceptor dehydrogenase, isoform C
3L	NT_037436.4	16353325	16354281	-	39812	Pdh	Dmel_CG4899	NP_730153.1	277	photoreceptor dehydrogenase, isoform B
3L	NT_037436.4	16353325	16354230	-	39812	Pdh	Dmel_CG4899	NP_001137960.1	260	photoreceptor dehydrogenase, isoform D
3L	NT_037436.4	16355185	16356029	-	39813	CG45057	Dmel_CG45057	NP_001246792.1	192	uncharacterized protein Dmel_CG45057, isoform B
3L	NT_037436.4	16355185	16356029	-	39813	CG45057	Dmel_CG45057	NP_648881.1	192	uncharacterized protein Dmel_CG45057, isoform A
3L	NT_037436.4	16355185	16356029	-	39813	CG45057	Dmel_CG45057	NP_001261939.1	192	uncharacterized protein Dmel_CG45057, isoform D
3L	NT_037436.4	16355185	16356029	-	39813	CG45057	Dmel_CG45057	NP_001261938.1	192	uncharacterized protein Dmel_CG45057, isoform C
3L	NT_037436.4	16362650	16363675	+	39814	Cpr72Ea	Dmel_CG4818	NP_648882.1	341	cuticular protein 72Ea
3L	NT_037436.4	16364997	16365650	+	39815	Cpr72Eb	Dmel_CG12255	NP_648883.1	217	cuticular protein 72Eb
3L	NT_037436.4	16366019	16367308	-	39816	Cpr72Ec	Dmel_CG4784	NP_648884.1	429	cuticular protein 72Ec
3L	NT_037436.4	16368457	16369432	+	39817	CG4842	Dmel_CG4842	NP_648885.1	259	CG4842
3L	NT_037436.4	16369876	16370843	+	59175	CG18814	Dmel_CG18814	NP_652673.2	267	uncharacterized protein Dmel_CG18814
3L	NT_037436.4	16374521	16377237	-	39818	roq	Dmel_CG16807	NP_001261940.1	819	roquin, isoform C
3L	NT_037436.4	16374521	16377237	-	39818	roq	Dmel_CG16807	NP_648886.1	819	roquin, isoform A
3L	NT_037436.4	16374521	16377237	-	39818	roq	Dmel_CG16807	NP_001261941.1	819	roquin, isoform B
3L	NT_037436.4	16379127	16380636	-	39819	CG4753	Dmel_CG4753	NP_648887.1	380	CG4753, isoform B
3L	NT_037436.4	16379127	16380636	-	39819	CG4753	Dmel_CG4753	NP_001261942.1	380	CG4753, isoform C
3L	NT_037436.4	16379127	16380636	-	39819	CG4753	Dmel_CG4753	NP_730158.1	380	CG4753, isoform A
3L	NT_037436.4	16382072	16384107	-	39820	CG4729	Dmel_CG4729	NP_730160.1	386	CG4729, isoform B
3L	NT_037436.4	16382072	16384107	-	39820	CG4729	Dmel_CG4729	NP_648888.1	386	CG4729, isoform A
3L	NT_037436.4	16382072	16384107	-	39820	CG4729	Dmel_CG4729	NP_730161.1	386	CG4729, isoform C
3L	NT_037436.4	16382072	16385454	-	39820	CG4729	Dmel_CG4729	NP_001246793.1	397	CG4729, isoform E
3L	NT_037436.4	16382072	16382727	-	39820	CG4729	Dmel_CG4729	NP_730162.1	143	CG4729, isoform D
3L	NT_037436.4	16386637	16390343	+	39821	RAF2	Dmel_CG4877	NP_648889.2	1117	RING-associated factor 2, isoform B
3L	NT_037436.4	16386637	16390343	+	39821	RAF2	Dmel_CG4877	NP_730163.1	1117	RING-associated factor 2, isoform A
3L	NT_037436.4	16386637	16390343	+	39821	RAF2	Dmel_CG4877	NP_001261943.1	1117	RING-associated factor 2, isoform C
3L	NT_037436.4	16391122	16400057	-	39825	CG44836	Dmel_CG44836	NP_730167.2	833	uncharacterized protein Dmel_CG44836, isoform E
3L	NT_037436.4	16391122	16391479	-	39825	CG44836	Dmel_CG44836	NP_001261944.1	77	uncharacterized protein Dmel_CG44836, isoform F
3L	NT_037436.4	16394950	16396008	+	39824	Gagr	Dmel_CG4680	NP_001287081.1	352	Gag-related, isoform B
3L	NT_037436.4	16394950	16396008	+	39824	Gagr	Dmel_CG4680	NP_648891.1	352	Gag-related, isoform A
3L	NT_037436.4	16405117	16407344	-	39826	fax	Dmel_CG4609	NP_001261946.1	274	failed axon connections, isoform F
3L	NT_037436.4	16405117	16407344	-	39826	fax	Dmel_CG4609	NP_001261945.1	271	failed axon connections, isoform E
3L	NT_037436.4	16405117	16411418	-	39826	fax	Dmel_CG4609	NP_001014587.1	415	failed axon connections, isoform C
3L	NT_037436.4	16405117	16408336	-	39826	fax	Dmel_CG4609	NP_001014586.1	279	failed axon connections, isoform D
3L	NT_037436.4	16405117	16408336	-	39826	fax	Dmel_CG4609	NP_788514.1	282	failed axon connections, isoform B
3L	NT_037436.4	16405117	16411418	-	39826	fax	Dmel_CG4609	NP_524106.3	418	failed axon connections, isoform A
3L	NT_037436.4	16412845	16415159	+	39827	TMS1	Dmel_CG4672	NP_001261951.1	456	TMS1, isoform E
3L	NT_037436.4	16412845	16415159	+	39827	TMS1	Dmel_CG4672	NP_648893.1	465	TMS1, isoform A
3L	NT_037436.4	16412845	16415159	+	39827	TMS1	Dmel_CG4672	NP_001261950.1	461	TMS1, isoform D
3L	NT_037436.4	16412845	16415159	+	39827	TMS1	Dmel_CG4672	NP_001261949.1	458	TMS1, isoform C
3L	NT_037436.4	16412845	16415159	+	39827	TMS1	Dmel_CG4672	NP_001261948.1	462	TMS1, isoform B
3L	NT_037436.4	16412845	16415155	+	39827	TMS1	Dmel_CG4672	NP_001261947.1	467	TMS1, isoform F
3L	NT_037436.4	16415390	16417111	-	39828	GluRS-m	Dmel_CG4573	NP_648894.2	511	Glutamyl-tRNA synthetase, mitochondrial
3L	NT_037436.4	16417483	16419243	-	39829	TyrRS	Dmel_CG4561	NP_648895.1	525	Tyrosyl-tRNA synthetase
3L	NT_037436.4	16419794	16491698	+	39834	CG33158	Dmel_CG33158	NP_788515.1	1033	uncharacterized protein Dmel_CG33158
3L	NT_037436.4	16423387	16451613	-	39831	dsx-c73A	Dmel_CG32159	NP_730169.1	852	doublesex cognate 73A
3L	NT_037436.4	16471299	16483076	-	39833	aos	Dmel_CG4531	NP_524107.2	444	argos
3L	NT_037436.4	16491980	16494919	-	8674108	CG42514	Dmel_CG42514	NP_648899.2	531	uncharacterized protein Dmel_CG42514, isoform C
3L	NT_037436.4	16491980	16495314	-	8674108	CG42514	Dmel_CG42514	NP_730172.1	533	uncharacterized protein Dmel_CG42514, isoform B
3L	NT_037436.4	16491980	16495314	-	8674108	CG42514	Dmel_CG42514	NP_730171.1	533	uncharacterized protein Dmel_CG42514, isoform A
3L	NT_037436.4	16497739	16500403	+	39836	st	Dmel_CG4314	NP_524108.1	666	scarlet
3L	NT_037436.4	16502291	16530633	-	39835	CG43373	Dmel_CG43373	NP_001097622.2	1854	uncharacterized protein Dmel_CG43373, isoform C
3L	NT_037436.4	16507728	16530633	-	39835	CG43373	Dmel_CG43373	NP_730173.3	1240	uncharacterized protein Dmel_CG43373, isoform B
3L	NT_037436.4	16544667	16545536	-	39839	CG13033	Dmel_CG13033	NP_648902.1	211	uncharacterized protein Dmel_CG13033
3L	NT_037436.4	16556896	16557853	+	39840	CG4229	Dmel_CG4229	NP_648903.1	256	CG4229
3L	NT_037436.4	16563921	16565863	-	39841	Mipp1	Dmel_CG4123	NP_524109.2	467	multiple inositol polyphosphate phosphatase 1, isoform A
3L	NT_037436.4	16563921	16565863	-	39841	Mipp1	Dmel_CG4123	NP_730177.1	467	multiple inositol polyphosphate phosphatase 1, isoform B
3L	NT_037436.4	16563921	16565863	-	39841	Mipp1	Dmel_CG4123	NP_001287082.1	467	multiple inositol polyphosphate phosphatase 1, isoform C
3L	NT_037436.4	16566853	16567190	+	12797919	CG43206	Dmel_CG43206	NP_001246794.1	72	uncharacterized protein Dmel_CG43206
3L	NT_037436.4	16574853	16575998	+	39842	mbf1	Dmel_CG4143	NP_001261952.1	188	multiprotein bridging factor 1, isoform E
3L	NT_037436.4	16574853	16575869	+	39842	mbf1	Dmel_CG4143	NP_524110.1	145	multiprotein bridging factor 1, isoform A
3L	NT_037436.4	16574853	16575869	+	39842	mbf1	Dmel_CG4143	NP_730178.1	145	multiprotein bridging factor 1, isoform B
3L	NT_037436.4	16574853	16575869	+	39842	mbf1	Dmel_CG4143	NP_001246796.1	145	multiprotein bridging factor 1, isoform C
3L	NT_037436.4	16574853	16575869	+	39842	mbf1	Dmel_CG4143	NP_001246795.1	145	multiprotein bridging factor 1, isoform D
3L	NT_037436.4	16577007	16579897	-	39843	nxf2	Dmel_CG4118	NP_524111.3	841	nuclear RNA export factor 2, isoform A
3L	NT_037436.4	16577007	16579897	-	39843	nxf2	Dmel_CG4118	NP_001261953.1	825	nuclear RNA export factor 2, isoform C
3L	NT_037436.4	16577007	16579897	-	39843	nxf2	Dmel_CG4118	NP_730179.2	841	nuclear RNA export factor 2, isoform B
3L	NT_037436.4	16580502	16581182	-	39844	Smn	Dmel_CG16725	NP_001261954.1	226	survival motor neuron, isoform B
3L	NT_037436.4	16580502	16581182	-	39844	Smn	Dmel_CG16725	NP_524112.1	226	survival motor neuron, isoform A
3L	NT_037436.4	16583100	16583894	+	39845	Rpn12	Dmel_CG4157	NP_648904.1	264	regulatory particle non-ATPase 12
3L	NT_037436.4	16584400	16586024	+	39846	UQCR-C2	Dmel_CG4169	NP_001261955.1	440	Ubiquinol-cytochrome c reductase core protein 2, isoform B
3L	NT_037436.4	16584400	16586024	+	39846	UQCR-C2	Dmel_CG4169	NP_648905.1	440	Ubiquinol-cytochrome c reductase core protein 2, isoform A
3L	NT_037436.4	16586227	16586978	-	39847	Syx8	Dmel_CG4109	NP_524113.1	232	syntaxin 8
3L	NT_037436.4	16587369	16587800	+	317891	CG32163	Dmel_CG32163	NP_730181.1	143	uncharacterized protein Dmel_CG32163, isoform A
3L	NT_037436.4	16587618	16587800	+	317891	CG32163	Dmel_CG32163	NP_001287083.1	60	uncharacterized protein Dmel_CG32163, isoform B
3L	NT_037436.4	16588852	16589774	+	48903	l(3)73Ah	Dmel_CG4195	NP_524933.1	222	lethal (3) 73Ah, isoform A
3L	NT_037436.4	16588852	16589774	+	48903	l(3)73Ah	Dmel_CG4195	NP_001246797.1	222	lethal (3) 73Ah, isoform B
3L	NT_037436.4	16590145	16591043	-	39849	tra	Dmel_CG16724	NP_524114.1	197	transformer, isoform A
3L	NT_037436.4	16590860	16591043	-	39849	tra	Dmel_CG16724	NP_001014588.1	36	transformer, isoform B
3L	NT_037436.4	16591404	16594966	-	39850	spd-2	Dmel_CG17286	NP_648906.1	1146	spindle defective 2
3L	NT_037436.4	16595534	16600167	+	59216	CG32165	Dmel_CG32165	NP_001261956.1	1059	uncharacterized protein Dmel_CG32165, isoform B
3L	NT_037436.4	16595534	16600167	+	59216	CG32165	Dmel_CG32165	NP_730182.1	1080	uncharacterized protein Dmel_CG32165, isoform A
3L	NT_037436.4	16595534	16600167	+	59216	CG32165	Dmel_CG32165	NP_001287084.1	1059	uncharacterized protein Dmel_CG32165, isoform C
3L	NT_037436.4	16603212	16607854	+	59215	CG32164	Dmel_CG32164	NP_001261957.1	1080	uncharacterized protein Dmel_CG32164, isoform B
3L	NT_037436.4	16603212	16607854	+	59215	CG32164	Dmel_CG32164	NP_730184.1	1079	uncharacterized protein Dmel_CG32164, isoform A
3L	NT_037436.4	16608228	16609207	-	39854	CG4098	Dmel_CG4098	NP_660192.1	307	CG4098
3L	NT_037436.4	16609536	16610318	-	39855	Prosbeta6	Dmel_CG4097	NP_524115.1	235	proteasome beta6 subunit
3L	NT_037436.4	16610738	16612117	-	39856	Su(P)	Dmel_CG4086	NP_524116.2	417	suppressor of ref(2)P sterility
3L	NT_037436.4	16612576	16612839	+	39857	CG4101	Dmel_CG4101	NP_648908.1	87	CG4101
3L	NT_037436.4	16614150	16615169	-	39858	Mo25	Dmel_CG4083	NP_001261958.1	339	Mo25, isoform B
3L	NT_037436.4	16614150	16615169	-	39858	Mo25	Dmel_CG4083	NP_524117.1	339	Mo25, isoform A
3L	NT_037436.4	16622690	16647143	-	45821	Abl	Dmel_CG4032	NP_001261965.1	1666	Abl tyrosine kinase, isoform I
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001287085.1	1620	Abl tyrosine kinase, isoform J
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261960.1	1607	Abl tyrosine kinase, isoform D
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261959.1	1705	Abl tyrosine kinase, isoform C
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261962.1	1723	Abl tyrosine kinase, isoform F
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261961.1	1589	Abl tyrosine kinase, isoform E
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001097623.1	1638	Abl tyrosine kinase, isoform B
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261963.1	1522	Abl tyrosine kinase, isoform G
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_524843.2	1620	Abl tyrosine kinase, isoform A
3L	NT_037436.4	16622774	16647143	-	45821	Abl	Dmel_CG4032	NP_001261964.1	1504	Abl tyrosine kinase, isoform H
3L	NT_037436.4	16650075	16659411	-	39860	Baldspot	Dmel_CG3971	NP_730187.2	316	baldspot, isoform B
3L	NT_037436.4	16650075	16659411	-	39860	Baldspot	Dmel_CG3971	NP_648909.1	316	baldspot, isoform A
3L	NT_037436.4	16662849	16667601	-	39861	Galphaf	Dmel_CG12232	NP_524118.1	399	G protein alpha f subunit
3L	NT_037436.4	16671795	16673499	-	39862	zetaCOP	Dmel_CG3948	NP_648910.1	174	coat protein (coatomer) zeta, isoform A
3L	NT_037436.4	16671795	16673409	-	39862	zetaCOP	Dmel_CG3948	NP_730188.1	163	coat protein (coatomer) zeta, isoform C
3L	NT_037436.4	16672421	16673499	-	39862	zetaCOP	Dmel_CG3948	NP_730189.1	169	coat protein (coatomer) zeta, isoform B
3L	NT_037436.4	16674148	16676244	+	39863	CG13032	Dmel_CG13032	NP_648911.1	660	uncharacterized protein Dmel_CG13032
3L	NT_037436.4	16677816	16678172	-	14462875	CG43954	Dmel_CG43954	NP_001261966.1	118	uncharacterized protein Dmel_CG43954
3L	NT_037436.4	16678179	16711011	-	14462875	CG43954	Dmel_CG43954	NP_730192.2	657	lasp, isoform B
3L	NT_037436.4	16678179	16711011	-	14462875	CG43954	Dmel_CG43954	NP_648912.2	504	lasp, isoform A
3L	NT_037436.4	16678179	16711011	-	14462875	CG43954	Dmel_CG43954	NP_001246799.1	282	lasp, isoform D
3L	NT_037436.4	16678179	16711011	-	14462875	CG43954	Dmel_CG43954	NP_001246798.1	636	lasp, isoform C
3L	NT_037436.4	16705017	16706228	+	39865	CG9692	Dmel_CG9692	NP_788516.1	382	CG9692, isoform B
3L	NT_037436.4	16705476	16706228	+	39865	CG9692	Dmel_CG9692	NP_001287086.1	250	CG9692, isoform C
3L	NT_037436.4	16712898	16723749	+	39866	Dab	Dmel_CG9695	NP_001261967.1	2336	disabled, isoform G
3L	NT_037436.4	16712898	16723341	+	39866	Dab	Dmel_CG9695	NP_001246801.1	2200	disabled, isoform D
3L	NT_037436.4	16712898	16723341	+	39866	Dab	Dmel_CG9695	NP_001246800.1	2047	disabled, isoform C
3L	NT_037436.4	16714212	16723341	+	39866	Dab	Dmel_CG9695	NP_001246802.1	2071	disabled, isoform E
3L	NT_037436.4	16714212	16723341	+	39866	Dab	Dmel_CG9695	NP_524119.2	2224	disabled, isoform A
3L	NT_037436.4	16714212	16723341	+	39866	Dab	Dmel_CG9695	NP_001261968.1	2146	disabled, isoform H
3L	NT_037436.4	16714212	16723749	+	39866	Dab	Dmel_CG9695	NP_001163455.2	2360	disabled, isoform F
3L	NT_037436.4	16714212	16723341	+	39866	Dab	Dmel_CG9695	NP_001261969.1	2149	disabled, isoform I
3L	NT_037436.4	16724891	16725314	+	39867	CG13031	Dmel_CG13031	NP_648914.1	122	uncharacterized protein Dmel_CG13031
3L	NT_037436.4	16725707	16726124	-	39868	CG13026	Dmel_CG13026	NP_001287087.1	118	uncharacterized protein Dmel_CG13026, isoform C
3L	NT_037436.4	16725707	16726124	-	39868	CG13026	Dmel_CG13026	NP_648915.2	118	uncharacterized protein Dmel_CG13026, isoform B
3L	NT_037436.4	16726548	16727156	+	39869	PGRP-SB2	Dmel_CG9697	NP_648916.1	182	PGRP-SB2, isoform A
3L	NT_037436.4	16726548	16727203	+	39869	PGRP-SB2	Dmel_CG9697	NP_001261970.1	191	PGRP-SB2, isoform B
3L	NT_037436.4	16727343	16727983	-	39870	PGRP-SB1	Dmel_CG9681	NP_648917.1	190	PGRP-SB1
3L	NT_037436.4	16728557	16730734	-	39871	Dbp73D	Dmel_CG9680	NP_476833.1	687	dead box protein 73D
3L	NT_037436.4	16733760	16739199	+	39872	CG9701	Dmel_CG9701	NP_648918.1	541	CG9701
3L	NT_037436.4	16755500	16755665	+	10178787	CG42852	Dmel_CG42852	NP_001189120.1	32	uncharacterized protein Dmel_CG42852
3L	NT_037436.4	16773757	16776360	+	39873	Nrt	Dmel_CG9704	NP_476798.1	846	neurotactin, isoform B
3L	NT_037436.4	16773757	16776360	+	39873	Nrt	Dmel_CG9704	NP_001189121.1	846	neurotactin, isoform C
3L	NT_037436.4	16773757	16776360	+	39873	Nrt	Dmel_CG9704	NP_730196.1	846	neurotactin, isoform A
3L	NT_037436.4	16777594	16779481	-	39874	CG13025	Dmel_CG13025	NP_648919.1	608	uncharacterized protein Dmel_CG13025, isoform A
3L	NT_037436.4	16777594	16779481	-	39874	CG13025	Dmel_CG13025	NP_001261971.1	608	uncharacterized protein Dmel_CG13025, isoform B
3L	NT_037436.4	16780657	16781838	+	39875	CG9705	Dmel_CG9705	NP_730197.1	143	CG9705, isoform B
3L	NT_037436.4	16780657	16781838	+	39875	CG9705	Dmel_CG9705	NP_648920.1	143	CG9705, isoform A
3L	NT_037436.4	16780657	16781838	+	39875	CG9705	Dmel_CG9705	NP_001261972.1	143	CG9705, isoform C
3L	NT_037436.4	16783309	16785051	+	39876	CG9706	Dmel_CG9706	NP_648921.2	525	CG9706, isoform A
3L	NT_037436.4	16783309	16785051	+	39876	CG9706	Dmel_CG9706	NP_730198.1	525	CG9706, isoform B
3L	NT_037436.4	16785346	16786833	-	39877	Int6	Dmel_CG9677	NP_477385.1	435	Int6
3L	NT_037436.4	16788410	16799792	-	39878	CG9674	Dmel_CG9674	NP_788517.1	2114	CG9674, isoform D
3L	NT_037436.4	16788410	16799792	-	39878	CG9674	Dmel_CG9674	NP_001261973.1	2115	CG9674, isoform G
3L	NT_037436.4	16788410	16799792	-	39878	CG9674	Dmel_CG9674	NP_001246804.1	2115	CG9674, isoform F
3L	NT_037436.4	16788410	16799792	-	39878	CG9674	Dmel_CG9674	NP_648922.1	2114	CG9674, isoform A
3L	NT_037436.4	16792332	16799792	-	39878	CG9674	Dmel_CG9674	NP_001246803.1	1164	CG9674, isoform E
3L	NT_037436.4	16792332	16799792	-	39878	CG9674	Dmel_CG9674	NP_001261974.1	1164	CG9674, isoform H
3L	NT_037436.4	16792437	16799792	-	39878	CG9674	Dmel_CG9674	NP_001287088.1	1164	CG9674, isoform I
3L	NT_037436.4	16808545	16819419	+	39879	nudC	Dmel_CG9710	NP_648923.1	332	nudC, isoform A
3L	NT_037436.4	16808545	16819419	+	39879	nudC	Dmel_CG9710	NP_001246805.1	332	nudC, isoform B
3L	NT_037436.4	16809996	16810867	-	39880	CG13024	Dmel_CG13024	NP_648924.2	235	uncharacterized protein Dmel_CG13024, isoform B
3L	NT_037436.4	16809996	16828488	-	39880	CG13024	Dmel_CG13024	NP_001246806.1	241	uncharacterized protein Dmel_CG13024, isoform C
3L	NT_037436.4	16842632	16844393	+	39881	TSG101	Dmel_CG9712	NP_524120.1	408	tumor susceptibility gene 101
3L	NT_037436.4	16844625	16844861	-	39882	CG9669	Dmel_CG9669	NP_001246807.1	78	CG9669, isoform B
3L	NT_037436.4	16844625	16844861	-	39882	CG9669	Dmel_CG9669	NP_648925.1	78	CG9669, isoform A
3L	NT_037436.4	16845501	16852216	+	39883	Zcchc7	Dmel_CG9715	NP_648926.3	1734	zinc finger CCHC-type containing 7
3L	NT_037436.4	16846297	16846983	+	317890	CG32161	Dmel_CG32161	NP_730205.1	228	uncharacterized protein Dmel_CG32161
3L	NT_037436.4	16852692	16862470	-	39887	Rh4	Dmel_CG9668	NP_476701.1	378	rhodopsin 4
3L	NT_037436.4	16856418	16857362	+	39884	sina	Dmel_CG9949	NP_730206.1	314	seven in absentia, isoform B
3L	NT_037436.4	16856418	16857362	+	39884	sina	Dmel_CG9949	NP_001287089.1	314	seven in absentia, isoform C
3L	NT_037436.4	16856418	16857362	+	39884	sina	Dmel_CG9949	NP_476725.1	314	seven in absentia, isoform A
3L	NT_037436.4	16859258	16860313	+	39885	sinah	Dmel_CG13030	NP_648927.1	351	sina homologue
3L	NT_037436.4	16860697	16861733	+	39886	CG13029	Dmel_CG13029	NP_648928.1	288	uncharacterized protein Dmel_CG13029, isoform C
3L	NT_037436.4	16861335	16861733	+	39886	CG13029	Dmel_CG13029	NP_001261975.1	132	uncharacterized protein Dmel_CG13029, isoform D
3L	NT_037436.4	16863246	16864913	+	39888	CG9951	Dmel_CG9951	NP_648929.1	555	CG9951
3L	NT_037436.4	16866866	16921594	+	39889	Lmpt	Dmel_CG42679	NP_001246808.1	559	limpet, isoform M
3L	NT_037436.4	16866866	16921594	+	39889	Lmpt	Dmel_CG42679	NP_648930.1	559	limpet, isoform B
3L	NT_037436.4	16866866	16921594	+	39889	Lmpt	Dmel_CG42679	NP_996110.1	559	limpet, isoform G
3L	NT_037436.4	16877459	16879081	+	317894	CG32170	Dmel_CG32170	NP_730211.1	540	uncharacterized protein Dmel_CG32170
3L	NT_037436.4	16887313	16921594	+	39889	Lmpt	Dmel_CG42679	NP_001261976.1	529	limpet, isoform N
3L	NT_037436.4	16896436	16921594	+	39889	Lmpt	Dmel_CG42679	NP_996109.1	558	limpet, isoform H
3L	NT_037436.4	16896436	16921594	+	39889	Lmpt	Dmel_CG42679	NP_730212.1	558	limpet, isoform D
3L	NT_037436.4	16900053	16921594	+	39889	Lmpt	Dmel_CG42679	NP_001189122.1	989	limpet, isoform J
3L	NT_037436.4	16900053	16906828	+	39889	Lmpt	Dmel_CG42679	NP_648931.1	694	limpet, isoform L
3L	NT_037436.4	16900053	16906742	+	39889	Lmpt	Dmel_CG42679	NP_996113.2	2147	limpet, isoform K
3L	NT_037436.4	16911452	16921594	+	39889	Lmpt	Dmel_CG42679	NP_730213.1	339	limpet, isoform C
3L	NT_037436.4	16912159	16921594	+	39889	Lmpt	Dmel_CG42679	NP_001303414.1	286	limpet, isoform O
3L	NT_037436.4	16912159	16921594	+	39889	Lmpt	Dmel_CG42679	NP_996111.1	286	limpet, isoform F
3L	NT_037436.4	16919480	16921594	+	39889	Lmpt	Dmel_CG42679	NP_648933.3	245	limpet, isoform A
3L	NT_037436.4	16919480	16921594	+	39889	Lmpt	Dmel_CG42679	NP_996112.1	245	limpet, isoform E
3L	NT_037436.4	16919480	16921594	+	39889	Lmpt	Dmel_CG42679	NP_001163456.1	245	limpet, isoform I
3L	NT_037436.4	16923331	16923888	+	2768967	CG13028	Dmel_CG13028	NP_996114.1	185	uncharacterized protein Dmel_CG13028
3L	NT_037436.4	16924693	16925984	-	39894	CG13023	Dmel_CG13023	NP_648935.1	411	uncharacterized protein Dmel_CG13023, isoform A
3L	NT_037436.4	16924693	16925984	-	39894	CG13023	Dmel_CG13023	NP_001287090.1	411	uncharacterized protein Dmel_CG13023, isoform B
3L	NT_037436.4	16928514	16935208	-	39895	CG11905	Dmel_CG11905	NP_730215.2	403	uncharacterized protein Dmel_CG11905, isoform B
3L	NT_037436.4	16928514	16935208	-	39895	CG11905	Dmel_CG11905	NP_001246809.1	404	uncharacterized protein Dmel_CG11905, isoform L
3L	NT_037436.4	16928514	16935208	-	39895	CG11905	Dmel_CG11905	NP_001097625.1	403	uncharacterized protein Dmel_CG11905, isoform I
3L	NT_037436.4	16928514	16935208	-	39895	CG11905	Dmel_CG11905	NP_730216.2	403	uncharacterized protein Dmel_CG11905, isoform F
3L	NT_037436.4	16930117	16935208	-	39895	CG11905	Dmel_CG11905	NP_730217.1	315	uncharacterized protein Dmel_CG11905, isoform C
3L	NT_037436.4	16930117	16935208	-	39895	CG11905	Dmel_CG11905	NP_001097624.1	315	uncharacterized protein Dmel_CG11905, isoform H
3L	NT_037436.4	16930117	16935208	-	39895	CG11905	Dmel_CG11905	NP_730218.1	315	uncharacterized protein Dmel_CG11905, isoform E
3L	NT_037436.4	16931271	16935208	-	39895	CG11905	Dmel_CG11905	NP_730219.1	607	uncharacterized protein Dmel_CG11905, isoform D
3L	NT_037436.4	16931271	16935208	-	39895	CG11905	Dmel_CG11905	NP_730220.1	607	uncharacterized protein Dmel_CG11905, isoform G
3L	NT_037436.4	16931271	16935208	-	39895	CG11905	Dmel_CG11905	NP_648936.1	607	uncharacterized protein Dmel_CG11905, isoform A
3L	NT_037436.4	16938346	16938942	-	39896	CG13022	Dmel_CG13022	NP_648937.2	198	uncharacterized protein Dmel_CG13022
3L	NT_037436.4	16939238	16942723	-	39897	Cpr73D	Dmel_CG9665	NP_001097627.1	597	cuticular protein 73D, isoform B
3L	NT_037436.4	16939238	16940783	-	39897	Cpr73D	Dmel_CG9665	NP_001303381.1	497	cuticular protein 73D, isoform C
3L	NT_037436.4	16944423	16945878	+	2768955	Obp73a	Dmel_CG13027	NP_001097628.1	259	Odorant-binding protein 73a, isoform B
3L	NT_037436.4	16944423	16954942	+	2768955	Obp73a	Dmel_CG13027	NP_001334711.1	247	Odorant-binding protein 73a, isoform C
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_730223.1	1008	neural conserved at 73EF, isoform A
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_730225.1	1008	neural conserved at 73EF, isoform C
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_730226.3	1105	neural conserved at 73EF, isoform J
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_001097629.1	1105	neural conserved at 73EF, isoform I
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_730224.1	1008	neural conserved at 73EF, isoform B
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_788519.1	1008	neural conserved at 73EF, isoform G
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_788520.2	1017	neural conserved at 73EF, isoform H
3L	NT_037436.4	16959121	16967481	+	39899	Nc73EF	Dmel_CG11661	NP_788518.1	1017	neural conserved at 73EF, isoform F
3L	NT_037436.4	16980681	16994141	+	39900	Exn	Dmel_CG42665	NP_001097630.2	2029	ephexin, isoform E
3L	NT_037436.4	16980681	16994141	+	39900	Exn	Dmel_CG42665	NP_001189123.1	2029	ephexin, isoform D
3L	NT_037436.4	16990528	16994141	+	39900	Exn	Dmel_CG42665	NP_648942.1	1051	ephexin, isoform A
3L	NT_037436.4	16990528	16994141	+	39900	Exn	Dmel_CG42665	NP_730228.1	1051	ephexin, isoform B
3L	NT_037436.4	16990528	16994141	+	39900	Exn	Dmel_CG42665	NP_730229.1	1051	ephexin, isoform C
3L	NT_037436.4	16995409	17001541	-	39902	CG3764	Dmel_CG3764	NP_648943.2	1385	CG3764, isoform A
3L	NT_037436.4	16995409	17011666	-	39902	CG3764	Dmel_CG3764	NP_001261977.1	1469	CG3764, isoform B
3L	NT_037436.4	16995409	17001541	-	39902	CG3764	Dmel_CG3764	NP_001261978.1	1385	CG3764, isoform C
3L	NT_037436.4	17013450	17015256	-	39903	CG6664	Dmel_CG6664	NP_730233.1	532	CG6664, isoform C
3L	NT_037436.4	17013450	17015256	-	39903	CG6664	Dmel_CG6664	NP_648944.1	532	CG6664, isoform A
3L	NT_037436.4	17013450	17015256	-	39903	CG6664	Dmel_CG6664	NP_730232.1	532	CG6664, isoform B
3L	NT_037436.4	17016639	17020178	+	39904	CG7728	Dmel_CG7728	NP_648945.1	1159	CG7728
3L	NT_037436.4	17020554	17022633	-	39905	CG6652	Dmel_CG6652	NP_648946.3	604	CG6652
3L	NT_037436.4	17023202	17023721	-	39906	a10	Dmel_CG6642	NP_524121.2	155	antennal protein 10
3L	NT_037436.4	17024658	17026805	+	39907	Fit2	Dmel_CG7729	NP_648947.1	715	fermitin 2
3L	NT_037436.4	17027669	17029591	+	39908	CG7730	Dmel_CG7730	NP_788521.2	581	CG7730
3L	NT_037436.4	17030043	17031897	-	39909	Ilp8	Dmel_CG14059	NP_648949.2	150	Insulin-like peptide 8
3L	NT_037436.4	17035699	17036838	+	39910	beg	Dmel_CG7842	NP_648950.1	379	bad egg
3L	NT_037436.4	17036932	17042459	-	3346235	scaf6	Dmel_CG33522	NP_001014589.1	960	SR-related CTD associated factor 6, isoform A
3L	NT_037436.4	17039578	17042459	-	3346235	scaf6	Dmel_CG33522	NP_001034028.2	251	SR-related CTD associated factor 6, isoform E
3L	NT_037436.4	17041685	17042459	-	3346235	scaf6	Dmel_CG33522	NP_001163457.1	182	SR-related CTD associated factor 6, isoform C
3L	NT_037436.4	17043066	17044374	+	39914	Papst2	Dmel_CG7853	NP_648954.1	396	PAPS transporter 2
3L	NT_037436.4	17044480	17045025	-	39915	CG14057	Dmel_CG14057	NP_648955.1	145	uncharacterized protein Dmel_CG14057, isoform A
3L	NT_037436.4	17044480	17044781	-	39915	CG14057	Dmel_CG14057	NP_001163458.1	82	uncharacterized protein Dmel_CG14057, isoform B
3L	NT_037436.4	17046257	17047993	+	39916	TpnC73F	Dmel_CG7930	NP_524122.2	155	troponin C at 73F, isoform A
3L	NT_037436.4	17046257	17047993	+	39916	TpnC73F	Dmel_CG7930	NP_001287091.1	155	troponin C at 73F, isoform C
3L	NT_037436.4	17049727	17054366	+	39917	rogdi	Dmel_CG7725	NP_730244.1	343	rogdi, isoform B
3L	NT_037436.4	17051410	17054366	+	39917	rogdi	Dmel_CG7725	NP_648956.1	268	rogdi, isoform A
3L	NT_037436.4	17057030	17058414	+	39918	CG7724	Dmel_CG7724	NP_648957.1	398	CG7724
3L	NT_037436.4	17065667	17235437	-	39919	Rbp6	Dmel_CG32169	NP_001261979.1	371	RNA-binding protein 6, isoform G
3L	NT_037436.4	17065667	17128971	-	39919	Rbp6	Dmel_CG32169	NP_001246812.1	259	RNA-binding protein 6, isoform E
3L	NT_037436.4	17066805	17128971	-	39919	Rbp6	Dmel_CG32169	NP_001097632.1	257	RNA-binding protein 6, isoform C
3L	NT_037436.4	17066805	17235437	-	39919	Rbp6	Dmel_CG32169	NP_730245.2	369	RNA-binding protein 6, isoform A
3L	NT_037436.4	17072701	17128971	-	39919	Rbp6	Dmel_CG32169	NP_001246813.1	225	RNA-binding protein 6, isoform F
3L	NT_037436.4	17073732	17128971	-	39919	Rbp6	Dmel_CG32169	NP_001137961.1	162	RNA-binding protein 6, isoform D
3L	NT_037436.4	17076768	17235437	-	39919	Rbp6	Dmel_CG32169	NP_001097631.1	499	RNA-binding protein 6, isoform B
3L	NT_037436.4	17239111	17241868	-	39922	CG6512	Dmel_CG6512	NP_730248.2	826	CG6512, isoform A
3L	NT_037436.4	17239111	17241416	-	39922	CG6512	Dmel_CG6512	NP_730250.1	697	CG6512, isoform B
3L	NT_037436.4	17243529	17244664	+	39923	CG7707	Dmel_CG7707	NP_648962.1	320	CG7707
3L	NT_037436.4	17253167	17253823	-	39924	CG6497	Dmel_CG6497	NP_648963.1	218	CG6497, isoform A
3L	NT_037436.4	17253167	17253823	-	39924	CG6497	Dmel_CG6497	NP_001261980.1	218	CG6497, isoform B
3L	NT_037436.4	17264500	17264832	+	39925	CG13723	Dmel_CG13723	NP_648964.1	110	uncharacterized protein Dmel_CG13723
3L	NT_037436.4	17320013	17320729	-	39926	ND-24L	Dmel_CG6485	NP_648965.1	238	NADH dehydrogenase (ubiquinone) 24 kDa subunit-like
3L	NT_037436.4	17322841	17324493	+	39927	CG13724	Dmel_CG13724	NP_648966.1	550	uncharacterized protein Dmel_CG13724
3L	NT_037436.4	17324825	17325424	-	39928	CG13725	Dmel_CG13725	NP_648967.1	199	uncharacterized protein Dmel_CG13725
3L	NT_037436.4	17327733	17329169	-	39929	Or74a	Dmel_CG13726	NP_524123.1	404	odorant receptor 74a
3L	NT_037436.4	17337321	17339111	-	39930	CG6479	Dmel_CG6479	NP_730256.1	538	CG6479, isoform B
3L	NT_037436.4	17337321	17339179	-	39930	CG6479	Dmel_CG6479	NP_648968.2	542	CG6479, isoform A
3L	NT_037436.4	17337321	17339179	-	39930	CG6479	Dmel_CG6479	NP_001261981.1	536	CG6479, isoform C
3L	NT_037436.4	17340279	17341316	-	39931	CG13727	Dmel_CG13727	NP_648969.1	302	uncharacterized protein Dmel_CG13727
3L	NT_037436.4	17342179	17344669	-	39932	brv2	Dmel_CG16793	NP_648970.2	736	brivido-2, isoform A
3L	NT_037436.4	17342179	17344669	-	39932	brv2	Dmel_CG16793	NP_001261982.1	714	brivido-2, isoform B
3L	NT_037436.4	17345418	17346053	-	39933	Mip	Dmel_CG6456	NP_648971.1	211	myoinhibiting peptide precursor
3L	NT_037436.4	17353158	17357465	+	39934	CG7692	Dmel_CG7692	NP_001261983.1	1323	CG7692, isoform B
3L	NT_037436.4	17353158	17357465	+	39934	CG7692	Dmel_CG7692	NP_648972.2	1324	CG7692, isoform A
3L	NT_037436.4	17353158	17357465	+	39934	CG7692	Dmel_CG7692	NP_001287092.1	1323	CG7692, isoform C
3L	NT_037436.4	17353158	17357465	+	39934	CG7692	Dmel_CG7692	NP_001303377.1	1323	CG7692, isoform D
3L	NT_037436.4	17359793	17360989	+	39935	tap	Dmel_CG7659	NP_524124.1	398	target of poxn
3L	NT_037436.4	17368457	17378436	-	39936	Cad74A	Dmel_CG6445	NP_730261.1	1820	cadherin 74A, isoform B
3L	NT_037436.4	17368457	17378436	-	39936	Cad74A	Dmel_CG6445	NP_648973.1	1820	cadherin 74A, isoform A
3L	NT_037436.4	17368457	17378436	-	39936	Cad74A	Dmel_CG6445	NP_001246814.1	1820	cadherin 74A, isoform C
3L	NT_037436.4	17380173	17382633	-	39937	CG13728	Dmel_CG13728	NP_648974.3	753	uncharacterized protein Dmel_CG13728
3L	NT_037436.4	17384028	17388747	-	39938	CG13731	Dmel_CG13731	NP_730262.3	792	uncharacterized protein Dmel_CG13731
3L	NT_037436.4	17396554	17403630	-	39939	blot	Dmel_CG3897	NP_001287093.1	809	bloated tubules, isoform E
3L	NT_037436.4	17396554	17406427	-	39939	blot	Dmel_CG3897	NP_730264.1	769	bloated tubules, isoform A
3L	NT_037436.4	17396554	17409863	-	39939	blot	Dmel_CG3897	NP_524125.2	976	bloated tubules, isoform B
3L	NT_037436.4	17396554	17409863	-	39939	blot	Dmel_CG3897	NP_730263.1	976	bloated tubules, isoform D
3L	NT_037436.4	17396554	17403630	-	39939	blot	Dmel_CG3897	NP_730265.1	809	bloated tubules, isoform C
3L	NT_037436.4	17422108	17425099	-	39940	Sec3	Dmel_CG3885	NP_648976.2	889	secretory 3
3L	NT_037436.4	17425595	17426195	+	50266	CG7630	Dmel_CG7630	NP_652413.1	90	CG7630
3L	NT_037436.4	17426308	17427069	-	39941	CG33051	Dmel_CG33051	NP_788522.1	211	uncharacterized protein Dmel_CG33051
3L	NT_037436.4	17427588	17428745	-	326245	CG33052	Dmel_CG33052	NP_788523.1	338	uncharacterized protein Dmel_CG33052
3L	NT_037436.4	17429147	17430337	-	39943	frc	Dmel_CG3874	NP_648977.3	268	uncharacterized protein Dmel_CG32174, isoform C
3L	NT_037436.4	17429147	17430337	-	39943	frc	Dmel_CG3874	NP_730270.1	268	uncharacterized protein Dmel_CG32174, isoform B
3L	NT_037436.4	17429147	17430337	-	39943	frc	Dmel_CG3874	NP_001246815.1	268	uncharacterized protein Dmel_CG32174, isoform D
3L	NT_037436.4	17431854	17432975	-	39943	frc	Dmel_CG3874	NP_524126.1	373	fringe connection, isoform A
3L	NT_037436.4	17431854	17432975	-	39943	frc	Dmel_CG3874	NP_001137962.1	373	fringe connection, isoform B
3L	NT_037436.4	17433937	17437858	+	39944	CG32176	Dmel_CG32176	NP_730271.1	581	uncharacterized protein Dmel_CG32176
3L	NT_037436.4	17434532	17436247	-	39945	CG12229	Dmel_CG12229	NP_648980.1	571	uncharacterized protein Dmel_CG12229
3L	NT_037436.4	17449407	17453375	+	39947	CG18265	Dmel_CG18265	NP_648982.1	1322	uncharacterized protein Dmel_CG18265, isoform A
3L	NT_037436.4	17449407	17453375	+	39947	CG18265	Dmel_CG18265	NP_001261985.1	1322	uncharacterized protein Dmel_CG18265, isoform C
3L	NT_037436.4	17449407	17453375	+	39947	CG18265	Dmel_CG18265	NP_001261984.1	1322	uncharacterized protein Dmel_CG18265, isoform B
3L	NT_037436.4	17466126	17466556	+	39948	QIL1	Dmel_CG7603	NP_648983.1	122	QIL1
3L	NT_037436.4	17470707	17474378	+	39949	CG7589	Dmel_CG7589	NP_001261986.1	509	CG7589, isoform B
3L	NT_037436.4	17470707	17474378	+	39949	CG7589	Dmel_CG7589	NP_648984.2	509	CG7589, isoform A
3L	NT_037436.4	17475420	17475745	+	39950	UQCR-Q	Dmel_CG7580	NP_648985.1	89	Ubiquinol-cytochrome c reductase ubiquinone-binding protein, isoform A
3L	NT_037436.4	17475420	17475745	+	39950	UQCR-Q	Dmel_CG7580	NP_001189124.1	89	Ubiquinol-cytochrome c reductase ubiquinone-binding protein, isoform B
3L	NT_037436.4	17475420	17475745	+	39950	UQCR-Q	Dmel_CG7580	NP_001261987.1	89	Ubiquinol-cytochrome c reductase ubiquinone-binding protein, isoform D
3L	NT_037436.4	17475420	17475745	+	39950	UQCR-Q	Dmel_CG7580	NP_001189125.1	89	Ubiquinol-cytochrome c reductase ubiquinone-binding protein, isoform C
3L	NT_037436.4	17476311	17476626	+	5740115	CG34250	Dmel_CG34250	NP_001287094.1	72	uncharacterized protein Dmel_CG34250, isoform B
3L	NT_037436.4	17476311	17476475	+	5740115	CG34250	Dmel_CG34250	NP_001097633.1	54	uncharacterized protein Dmel_CG34250, isoform A
3L	NT_037436.4	17477949	17478806	-	39951	CG13733	Dmel_CG13733	NP_648986.1	285	uncharacterized protein Dmel_CG13733
3L	NT_037436.4	17479362	17480063	+	39952	qjt	Dmel_CG13732	NP_001261988.1	233	quijote, isoform B
3L	NT_037436.4	17479362	17480063	+	39952	qjt	Dmel_CG13732	NP_648987.1	233	quijote, isoform A
3L	NT_037436.4	17480245	17480865	-	39953	CG6333	Dmel_CG6333	NP_730277.1	206	CG6333, isoform A
3L	NT_037436.4	17480245	17480865	-	39953	CG6333	Dmel_CG6333	NP_001163459.1	206	CG6333, isoform B
3L	NT_037436.4	17494889	17495236	+	317900	edin	Dmel_CG32185	NP_730278.1	115	elevated during infection
3L	NT_037436.4	17507897	17511095	+	39954	Oatp74D	Dmel_CG7571	NP_648989.1	819	organic anion transporting polypeptide 74D, isoform A
3L	NT_037436.4	17507897	17511095	+	39954	Oatp74D	Dmel_CG7571	NP_001287095.1	819	organic anion transporting polypeptide 74D, isoform D
3L	NT_037436.4	17507897	17511095	+	39954	Oatp74D	Dmel_CG7571	NP_001163460.1	819	organic anion transporting polypeptide 74D, isoform C
3L	NT_037436.4	17507897	17511095	+	39954	Oatp74D	Dmel_CG7571	NP_001287096.1	819	organic anion transporting polypeptide 74D, isoform E
3L	NT_037436.4	17512120	17513781	-	39955	U4-U6-60K	Dmel_CG6322	NP_648990.1	553	U4-U6 small nuclear riboprotein factor 60K
3L	NT_037436.4	17514468	17515730	+	39956	CG7564	Dmel_CG7564	NP_001287098.1	420	CG7564, isoform D
3L	NT_037436.4	17514468	17515730	+	39956	CG7564	Dmel_CG7564	NP_648991.1	420	CG7564, isoform A
3L	NT_037436.4	17514468	17515730	+	39956	CG7564	Dmel_CG7564	NP_001287097.1	420	CG7564, isoform C
3L	NT_037436.4	17514468	17515730	+	39956	CG7564	Dmel_CG7564	NP_001261989.1	420	CG7564, isoform B
3L	NT_037436.4	17526959	17529468	-	39957	Edc3	Dmel_CG6311	NP_648992.1	680	enhancer of decapping 3
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_001261991.1	999	Nedd4, isoform M
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_001137965.1	994	Nedd4, isoform H
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_001261990.1	1005	Nedd4, isoform L
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_648993.1	1007	Nedd4, isoform J
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_001137964.1	983	Nedd4, isoform I
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_730282.1	834	Nedd4, isoform K
3L	NT_037436.4	17530847	17545610	+	39958	Nedd4	Dmel_CG42279	NP_730284.2	931	Nedd4, isoform G
3L	NT_037436.4	17534488	17545610	+	39958	Nedd4	Dmel_CG42279	NP_730283.1	956	Nedd4, isoform F
3L	NT_037436.4	17534488	17545610	+	39958	Nedd4	Dmel_CG42279	NP_996116.1	793	Nedd4, isoform E
3L	NT_037436.4	17546868	17549043	-	39959	Jon74E	Dmel_CG6298	NP_648994.1	412	jonah 74E, isoform A
3L	NT_037436.4	17548149	17549043	-	39959	Jon74E	Dmel_CG6298	NP_001189126.1	248	jonah 74E, isoform B
3L	NT_037436.4	17549837	17550649	+	39960	CG7542	Dmel_CG7542	NP_648995.3	270	CG7542, isoform A
3L	NT_037436.4	17549837	17550649	+	39960	CG7542	Dmel_CG7542	NP_001287099.1	270	CG7542, isoform B
3L	NT_037436.4	17552804	17557072	-	39961	CycT	Dmel_CG6292	NP_524127.2	1097	cyclin T, isoform B
3L	NT_037436.4	17552804	17555514	-	39961	CycT	Dmel_CG6292	NP_996117.1	884	cyclin T, isoform A
3L	NT_037436.4	17552804	17557072	-	39961	CycT	Dmel_CG6292	NP_001261992.1	1097	cyclin T, isoform C
3L	NT_037436.4	17552804	17555514	-	39961	CycT	Dmel_CG6292	NP_001261993.1	884	cyclin T, isoform D
3L	NT_037436.4	17561770	17598952	-	39962	Eip74EF	Dmel_CG32180	NP_001246816.1	844	Ecdysone-induced protein 74EF, isoform E
3L	NT_037436.4	17561770	17598907	-	39962	Eip74EF	Dmel_CG32180	NP_730287.1	829	Ecdysone-induced protein 74EF, isoform A
3L	NT_037436.4	17561770	17575831	-	39962	Eip74EF	Dmel_CG32180	NP_730288.1	883	Ecdysone-induced protein 74EF, isoform B
3L	NT_037436.4	17561770	17599024	-	39962	Eip74EF	Dmel_CG32180	NP_730286.3	868	Ecdysone-induced protein 74EF, isoform C
3L	NT_037436.4	17561770	17575831	-	39962	Eip74EF	Dmel_CG32180	NP_001014590.1	883	Ecdysone-induced protein 74EF, isoform D
3L	NT_037436.4	17620295	17621378	-	39964	Vps60	Dmel_CG6259	NP_001261994.1	226	vacuolar protein sorting 60, isoform B
3L	NT_037436.4	17620295	17621378	-	39964	Vps60	Dmel_CG6259	NP_648997.1	226	vacuolar protein sorting 60, isoform A
3L	NT_037436.4	17622303	17629986	+	39965	CG7510	Dmel_CG7510	NP_001261995.1	957	CG7510, isoform B
3L	NT_037436.4	17622303	17629986	+	39965	CG7510	Dmel_CG7510	NP_648998.2	949	CG7510, isoform A
3L	NT_037436.4	17633740	17637709	+	39966	CG7497	Dmel_CG7497	NP_648999.2	412	CG7497, isoform B
3L	NT_037436.4	17633740	17637709	+	39966	CG7497	Dmel_CG7497	NP_001287100.1	412	CG7497, isoform C
3L	NT_037436.4	17638505	17643986	-	45961	Pep	Dmel_CG6143	NP_524858.1	716	protein on ecdysone puffs, isoform B
3L	NT_037436.4	17638505	17643665	-	45961	Pep	Dmel_CG6143	NP_996118.1	693	protein on ecdysone puffs, isoform C
3L	NT_037436.4	17638505	17643665	-	45961	Pep	Dmel_CG6143	NP_001246817.1	693	protein on ecdysone puffs, isoform D
3L	NT_037436.4	17640027	17643665	-	45961	Pep	Dmel_CG6143	NP_730290.3	109	protein on ecdysone puffs, isoform A
3L	NT_037436.4	17645614	17646440	-	12797926	CG43085	Dmel_CG43085	NP_001261996.1	255	uncharacterized protein Dmel_CG43085, isoform B
3L	NT_037436.4	17645614	17646440	-	12797926	CG43085	Dmel_CG43085	NP_001246818.1	255	uncharacterized protein Dmel_CG43085, isoform A
3L	NT_037436.4	17648441	17649244	-	326197	Ndfip	Dmel_CG32177	NP_730291.1	267	Nedd4 family interacting protein
3L	NT_037436.4	17649879	17650532	-	326198	Krn	Dmel_CG32179	NP_524129.1	217	keren
3L	NT_037436.4	17654688	17655596	+	39969	CG7484	Dmel_CG7484	NP_649000.1	178	CG7484
3L	NT_037436.4	17661950	17664619	-	39970	Crtc	Dmel_CG6064	NP_001261997.1	889	CREB-regulated transcription coactivator, isoform B
3L	NT_037436.4	17662226	17664619	-	39970	Crtc	Dmel_CG6064	NP_649001.1	797	CREB-regulated transcription coactivator, isoform A
3L	NT_037436.4	17662226	17664619	-	39970	Crtc	Dmel_CG6064	NP_001287101.1	797	CREB-regulated transcription coactivator, isoform C
3L	NT_037436.4	17673657	17683142	+	5740860	CG34251	Dmel_CG34251	NP_001163461.1	185	uncharacterized protein Dmel_CG34251, isoform B
3L	NT_037436.4	17673657	17683142	+	5740860	CG34251	Dmel_CG34251	NP_001097634.1	185	uncharacterized protein Dmel_CG34251, isoform A
3L	NT_037436.4	17715970	17748024	+	39972	Ccn	Dmel_CG32183	NP_730294.1	470	Ccn
3L	NT_037436.4	17719193	17719854	-	3772073	CheB74a	Dmel_CG33924	NP_001027134.1	202	chemosensory protein B 74a
3L	NT_037436.4	17723719	17729244	-	39971	CG6052	Dmel_CG6052	NP_649002.2	1700	CG6052
3L	NT_037436.4	17740825	17742285	+	39973	CG7460	Dmel_CG7460	NP_001261998.1	486	CG7460, isoform C
3L	NT_037436.4	17740825	17742285	+	39973	CG7460	Dmel_CG7460	NP_649004.1	486	CG7460, isoform B
3L	NT_037436.4	17745373	17746812	-	39974	CG6034	Dmel_CG6034	NP_649005.1	479	CG6034
3L	NT_037436.4	17748869	17750493	-	39975	Adgf-B	Dmel_CG5998	NP_649006.2	520	adenosine deaminase-related growth factor B
3L	NT_037436.4	17752453	17754318	-	39976	Adgf-A	Dmel_CG5992	NP_524130.1	553	adenosine deaminase-related growth factor A, isoform A
3L	NT_037436.4	17752453	17754318	-	39976	Adgf-A	Dmel_CG5992	NP_996119.1	553	adenosine deaminase-related growth factor A, isoform B
3L	NT_037436.4	17754968	17756783	-	64879	Adgf-A2	Dmel_CG32178	NP_001036612.1	542	adenosine deaminase-related growth factor A2, isoform B
3L	NT_037436.4	17754968	17756783	-	64879	Adgf-A2	Dmel_CG32178	NP_001036613.1	542	adenosine deaminase-related growth factor A2, isoform C
3L	NT_037436.4	17754968	17756840	-	64879	Adgf-A2	Dmel_CG32178	NP_525020.2	561	adenosine deaminase-related growth factor A2, isoform A
3L	NT_037436.4	17758165	17759424	+	317898	CG32182	Dmel_CG32182	NP_730299.1	419	uncharacterized protein Dmel_CG32182
3L	NT_037436.4	17760146	17762705	+	317897	CG32181	Dmel_CG32181	NP_730300.2	570	uncharacterized protein Dmel_CG32181
3L	NT_037436.4	17791156	17791461	-	10178812	CG42815	Dmel_CG42815	NP_001189127.1	101	uncharacterized protein Dmel_CG42815
3L	NT_037436.4	17792095	17797140	-	39977	CG42816	Dmel_CG42816	NP_730301.3	1459	uncharacterized protein Dmel_CG42816
3L	NT_037436.4	17798086	17802134	-	39978	NUCB1	Dmel_CG32190	NP_649008.2	569	NUCB1
3L	NT_037436.4	17802766	17804664	-	39979	CG5589	Dmel_CG5589	NP_649009.1	594	CG5589
3L	NT_037436.4	17804940	17806293	-	39980	CG32187	Dmel_CG32187	NP_730303.1	409	uncharacterized protein Dmel_CG32187
3L	NT_037436.4	17806776	17808747	-	317903	CG32191	Dmel_CG32191	NP_001287102.1	564	uncharacterized protein Dmel_CG32191, isoform C
3L	NT_037436.4	17806776	17808747	-	317903	CG32191	Dmel_CG32191	NP_730304.2	564	uncharacterized protein Dmel_CG32191, isoform B
3L	NT_037436.4	17809445	17810989	-	39981	cln3	Dmel_CG5582	NP_001261999.1	422	cln3, isoform B
3L	NT_037436.4	17809445	17810989	-	39981	cln3	Dmel_CG5582	NP_649011.1	422	cln3, isoform A
3L	NT_037436.4	17815662	17817921	-	39982	Ir75a	Dmel_CG14585	NP_649012.2	629	ionotropic receptor 75a
3L	NT_037436.4	17818073	17820193	-	8673994	Ir75b	Dmel_CG42643	NP_001137966.2	605	ionotropic receptor 75b
3L	NT_037436.4	17820493	17822834	-	39983	Ir75c	Dmel_CG42642	NP_649013.3	623	ionotropic receptor 75c
3L	NT_037436.4	17829314	17838677	+	39984	Grd	Dmel_CG7446	NP_524131.1	686	glycine receptor
3L	NT_037436.4	17833277	17833594	-	317901	CG32188	Dmel_CG32188	NP_730308.1	105	uncharacterized protein Dmel_CG32188
3L	NT_037436.4	17834824	17835141	-	317902	CG32189	Dmel_CG32189	NP_730309.1	105	uncharacterized protein Dmel_CG32189
3L	NT_037436.4	17839820	17841383	-	39985	CG5577	Dmel_CG5577	NP_001303369.1	315	CG5577, isoform B
3L	NT_037436.4	17839820	17841383	-	39985	CG5577	Dmel_CG5577	NP_649014.1	315	CG5577, isoform A
3L	NT_037436.4	17841707	17843416	-	39986	CG5567	Dmel_CG5567	NP_649015.2	330	CG5567
3L	NT_037436.4	17844254	17846191	-	39987	MED19	Dmel_CG5546	NP_649016.1	337	mediator complex subunit 19, isoform A
3L	NT_037436.4	17844254	17846191	-	39987	MED19	Dmel_CG5546	NP_001287103.1	337	mediator complex subunit 19, isoform B
3L	NT_037436.4	17847197	17849145	+	39988	CG7430	Dmel_CG7430	NP_001262000.1	504	CG7430, isoform B
3L	NT_037436.4	17847197	17849145	+	39988	CG7430	Dmel_CG7430	NP_649017.1	504	CG7430, isoform A
3L	NT_037436.4	17849880	17852127	+	39989	TrpRS-m	Dmel_CG7441	NP_649018.2	665	Tryptophanyl-tRNA synthetase, mitochondrial, isoform A
3L	NT_037436.4	17849880	17852127	+	39989	TrpRS-m	Dmel_CG7441	NP_001262001.1	665	Tryptophanyl-tRNA synthetase, mitochondrial, isoform B
3L	NT_037436.4	17852648	17856671	-	39990	CG5535	Dmel_CG5535	NP_649019.2	630	CG5535, isoform C
3L	NT_037436.4	17852648	17854706	-	39990	CG5535	Dmel_CG5535	NP_730312.1	621	CG5535, isoform B
3L	NT_037436.4	17858474	17860387	+	3885644	CG34002	Dmel_CG34002	NP_001034029.2	350	uncharacterized protein Dmel_CG34002
3L	NT_037436.4	17880163	17882613	+	39991	CG7408	Dmel_CG7408	NP_001163463.1	585	CG7408, isoform D
3L	NT_037436.4	17880163	17882613	+	39991	CG7408	Dmel_CG7408	NP_649020.1	585	CG7408, isoform B
3L	NT_037436.4	17880163	17882613	+	39991	CG7408	Dmel_CG7408	NP_001163462.1	585	CG7408, isoform C
3L	NT_037436.4	17883736	17884345	-	39992	CG5506	Dmel_CG5506	NP_649021.1	180	CG5506
3L	NT_037436.4	17886066	17886641	-	39993	CG16775	Dmel_CG16775	NP_649022.2	191	uncharacterized protein Dmel_CG16775
3L	NT_037436.4	17889349	17891354	+	39994	CG7402	Dmel_CG7402	NP_649023.1	579	CG7402
3L	NT_037436.4	17892235	17893377	-	39995	Tsp74F	Dmel_CG5492	NP_524132.1	236	tetraspanin 74F, isoform B
3L	NT_037436.4	17892235	17893377	-	39995	Tsp74F	Dmel_CG5492	NP_730317.1	236	tetraspanin 74F, isoform A
3L	NT_037436.4	17899269	17901753	-	39996	Prestin	Dmel_CG5485	NP_649024.1	742	prestin
3L	NT_037436.4	17908254	17909437	+	39997	CG14353	Dmel_CG14353	NP_649025.1	375	uncharacterized protein Dmel_CG14353
3L	NT_037436.4	17909749	17912311	-	39998	CG5290	Dmel_CG5290	NP_649026.1	798	CG5290
3L	NT_037436.4	17953641	18059584	-	39999	Eip75B	Dmel_CG8127	NP_730321.1	1412	Ecdysone-induced protein 75B, isoform B
3L	NT_037436.4	17953641	17999131	-	39999	Eip75B	Dmel_CG8127	NP_730322.1	1199	Ecdysone-induced protein 75B, isoform C
3L	NT_037436.4	17953641	17970909	-	39999	Eip75B	Dmel_CG8127	NP_524133.2	1355	Ecdysone-induced protein 75B, isoform A
3L	NT_037436.4	17953641	18059584	-	39999	Eip75B	Dmel_CG8127	NP_001246821.1	1412	Ecdysone-induced protein 75B, isoform E
3L	NT_037436.4	17953641	17961068	-	39999	Eip75B	Dmel_CG8127	NP_730323.1	906	Ecdysone-induced protein 75B, isoform D
3L	NT_037436.4	17953641	18025415	-	39999	Eip75B	Dmel_CG8127	NP_001303380.1	991	Ecdysone-induced protein 75B, isoform G
3L	NT_037436.4	17953641	18059584	-	39999	Eip75B	Dmel_CG8127	NP_001246822.1	1412	Ecdysone-induced protein 75B, isoform F
3L	NT_037436.4	18040420	18040986	+	317904	CG32192	Dmel_CG32192	NP_730325.1	136	uncharacterized protein Dmel_CG32192, isoform B
3L	NT_037436.4	18040420	18040986	+	317904	CG32192	Dmel_CG32192	NP_730326.1	133	uncharacterized protein Dmel_CG32192, isoform C
3L	NT_037436.4	18042844	18043389	+	7354474	CG42393	Dmel_CG42393	NP_001137967.1	135	uncharacterized protein Dmel_CG42393
3L	NT_037436.4	18068808	18070115	-	14462878	CG44006	Dmel_CG44006	NP_001262002.1	374	uncharacterized protein Dmel_CG44006
3L	NT_037436.4	18070539	18072069	-	5740769	CG44005	Dmel_CG44005	NP_001097635.2	370	uncharacterized protein Dmel_CG44005, isoform B
3L	NT_037436.4	18070539	18072069	-	5740769	CG44005	Dmel_CG44005	NP_001262003.1	370	uncharacterized protein Dmel_CG44005, isoform A
3L	NT_037436.4	18072523	18073829	-	14462879	CG44004	Dmel_CG44004	NP_001287104.1	368	uncharacterized protein Dmel_CG44004, isoform C
3L	NT_037436.4	18072523	18073829	-	14462879	CG44004	Dmel_CG44004	NP_001262004.2	368	uncharacterized protein Dmel_CG44004, isoform B
3L	NT_037436.4	18086696	18087197	-	5740501	CG34253	Dmel_CG34253	NP_001097636.1	112	uncharacterized protein Dmel_CG34253
3L	NT_037436.4	18089181	18090562	-	40000	CG13698	Dmel_CG13698	NP_001262005.1	316	uncharacterized protein Dmel_CG13698, isoform C
3L	NT_037436.4	18089181	18090562	-	40000	CG13698	Dmel_CG13698	NP_649027.1	316	uncharacterized protein Dmel_CG13698, isoform B
3L	NT_037436.4	18106662	18107435	+	40001	mRpS26	Dmel_CG7354	NP_524134.1	225	mitochondrial ribosomal protein S26
3L	NT_037436.4	18107962	18109392	-	40002	CG5147	Dmel_CG5147	NP_649028.3	415	CG5147
3L	NT_037436.4	18109915	18112673	+	40003	mus304	Dmel_CG7347	NP_524135.3	846	mutagen-sensitive 304
3L	NT_037436.4	18114426	18115760	+	317907	CG32195	Dmel_CG32195	NP_001262007.1	401	uncharacterized protein Dmel_CG32195, isoform C
3L	NT_037436.4	18114426	18115760	+	317907	CG32195	Dmel_CG32195	NP_001262006.1	401	uncharacterized protein Dmel_CG32195, isoform B
3L	NT_037436.4	18114426	18115760	+	317907	CG32195	Dmel_CG32195	NP_730328.1	401	uncharacterized protein Dmel_CG32195, isoform A
3L	NT_037436.4	18119817	18120890	+	40004	CG7341	Dmel_CG7341	NP_649029.1	357	CG7341, isoform A
3L	NT_037436.4	18119817	18120890	+	40004	CG7341	Dmel_CG7341	NP_730329.1	357	CG7341, isoform B
3L	NT_037436.4	18121016	18121927	-	10178880	CG42853	Dmel_CG42853	NP_001189128.1	284	uncharacterized protein Dmel_CG42853
3L	NT_037436.4	18130167	18132066	-	40005	Cyp312a1	Dmel_CG5137	NP_649030.1	510	Cyp312a1, isoform A
3L	NT_037436.4	18130167	18132066	-	40005	Cyp312a1	Dmel_CG5137	NP_001262008.1	510	Cyp312a1, isoform B
3L	NT_037436.4	18139789	18145108	+	50263	geko	Dmel_CG13695	NP_524980.1	206	geko
3L	NT_037436.4	18149046	18153346	+	40007	CG7330	Dmel_CG7330	NP_001262009.1	193	CG7330, isoform B
3L	NT_037436.4	18149046	18153346	+	40007	CG7330	Dmel_CG7330	NP_649032.1	193	CG7330, isoform A
3L	NT_037436.4	18155190	18159966	-	40008	CG13699	Dmel_CG13699	NP_649033.1	1051	uncharacterized protein Dmel_CG13699
3L	NT_037436.4	18170011	18185122	-	40009	hid	Dmel_CG5123	NP_001262010.1	410	head involution defective, isoform B
3L	NT_037436.4	18170011	18185122	-	40009	hid	Dmel_CG5123	NP_524136.2	410	head involution defective, isoform A
3L	NT_037436.4	18201505	18203566	+	40010	CG7320	Dmel_CG7320	NP_649034.3	646	CG7320
3L	NT_037436.4	18252088	18252702	+	40011	CheA75a	Dmel_CG7313	NP_649035.2	184	chemosensory protein A 75a
3L	NT_037436.4	18292293	18294228	-	40012	CG5103	Dmel_CG5103	NP_649036.1	623	CG5103
3L	NT_037436.4	18298831	18301133	-	40013	CG13700	Dmel_CG13700	NP_001262013.1	575	uncharacterized protein Dmel_CG13700, isoform E
3L	NT_037436.4	18298831	18301133	-	40013	CG13700	Dmel_CG13700	NP_649037.2	574	uncharacterized protein Dmel_CG13700, isoform B
3L	NT_037436.4	18298831	18301133	-	40013	CG13700	Dmel_CG13700	NP_001262012.1	571	uncharacterized protein Dmel_CG13700, isoform D
3L	NT_037436.4	18298831	18301133	-	40013	CG13700	Dmel_CG13700	NP_001262011.1	572	uncharacterized protein Dmel_CG13700, isoform C
3L	NT_037436.4	18303683	18304099	-	40014	grim	Dmel_CG4345	NP_524137.2	138	grim
3L	NT_037436.4	18398038	18398235	-	40015	rpr	Dmel_CG4319	NP_524138.1	65	reaper
3L	NT_037436.4	18439501	18439827	-	40016	skl	Dmel_CG13701	NP_524139.1	108	sickle
3L	NT_037436.4	18459558	18460880	-	317908	CG32196	Dmel_CG32196	NP_730334.2	195	uncharacterized protein Dmel_CG32196, isoform B
3L	NT_037436.4	18459558	18460880	-	317908	CG32196	Dmel_CG32196	NP_001262014.1	154	uncharacterized protein Dmel_CG32196, isoform C
3L	NT_037436.4	18462228	18463068	-	40017	CG4306	Dmel_CG4306	NP_649038.1	220	CG4306
3L	NT_037436.4	18469443	18469598	-	44481	Met75Cb	Dmel_CG18064	NP_651980.1	51	Met75Cb
3L	NT_037436.4	18472209	18472364	-	44482	Met75Ca	Dmel_CG32197	NP_730336.1	51	Met75Ca
3L	NT_037436.4	18486597	18488804	-	40019	AstC-R2	Dmel_CG13702	NP_001303398.1	593	allatostatin C receptor 2, isoform F
3L	NT_037436.4	18486675	18488804	-	40019	AstC-R2	Dmel_CG13702	NP_001262015.1	567	allatostatin C receptor 2, isoform D
3L	NT_037436.4	18486729	18488804	-	40019	AstC-R2	Dmel_CG13702	NP_001027135.2	549	allatostatin C receptor 2, isoform E
3L	NT_037436.4	18486729	18488804	-	40019	AstC-R2	Dmel_CG13702	NP_649039.4	549	allatostatin C receptor 2, isoform B
3L	NT_037436.4	18526990	18527400	+	317909	CG32198	Dmel_CG32198	NP_730339.1	136	uncharacterized protein Dmel_CG32198
3L	NT_037436.4	18573840	18575411	+	40020	AstC-R1	Dmel_CG7285	NP_649040.2	483	allatostatin C receptor 1
3L	NT_037436.4	18588859	18590142	+	40021	CG7271	Dmel_CG7271	NP_649041.1	427	CG7271
3L	NT_037436.4	18592325	18593611	-	47208	term	Dmel_CG4216	NP_524882.2	428	terminus
3L	NT_037436.4	18600346	18602052	-	40029	CG13380	Dmel_CG13380	NP_001034031.2	473	CG4174, isoform F
3L	NT_037436.4	18600346	18602052	-	40029	CG13380	Dmel_CG13380	NP_001034032.2	473	CG4174, isoform E
3L	NT_037436.4	18600346	18602052	-	40029	CG13380	Dmel_CG13380	NP_730342.2	473	CG4174, isoform D
3L	NT_037436.4	18603440	18605403	+	40024	CG18234	Dmel_CG18234	NP_649043.3	515	uncharacterized protein Dmel_CG18234
3L	NT_037436.4	18605472	18607349	+	40025	CG18233	Dmel_CG18233	NP_649044.3	515	uncharacterized protein Dmel_CG18233
3L	NT_037436.4	18607505	18609420	+	40026	CG18231	Dmel_CG18231	NP_649045.2	470	uncharacterized protein Dmel_CG18231
3L	NT_037436.4	18609629	18611661	+	317911	CG32201	Dmel_CG32201	NP_730346.2	520	uncharacterized protein Dmel_CG32201
3L	NT_037436.4	18611978	18613920	+	40028	CG32199	Dmel_CG32199	NP_730347.1	509	uncharacterized protein Dmel_CG32199
3L	NT_037436.4	18616311	18617157	-	40029	CG13380	Dmel_CG13380	NP_001262016.1	169	uncharacterized protein Dmel_CG13380, isoform C
3L	NT_037436.4	18616311	18617157	-	40029	CG13380	Dmel_CG13380	NP_001287105.1	169	uncharacterized protein Dmel_CG13380, isoform D
3L	NT_037436.4	18616311	18617157	-	40029	CG13380	Dmel_CG13380	NP_001034030.1	169	uncharacterized protein Dmel_CG13380, isoform B
3L	NT_037436.4	18619165	18621491	-	40030	not	Dmel_CG4166	NP_524140.2	496	non-stop, isoform B
3L	NT_037436.4	18619165	18621491	-	40030	not	Dmel_CG4166	NP_001287106.1	496	non-stop, isoform C
3L	NT_037436.4	18622787	18624464	+	40031	bora	Dmel_CG6897	NP_649048.1	539	aurora borealis
3L	NT_037436.4	18661898	18666254	+	40032	MYPT-75D	Dmel_CG6896	NP_649049.1	741	MYPT-75D, isoform A
3L	NT_037436.4	18661898	18666254	+	40032	MYPT-75D	Dmel_CG6896	NP_001262017.1	635	MYPT-75D, isoform B
3L	NT_037436.4	18661898	18666254	+	40032	MYPT-75D	Dmel_CG6896	NP_001262019.1	741	MYPT-75D, isoform D
3L	NT_037436.4	18661898	18666254	+	40032	MYPT-75D	Dmel_CG6896	NP_001262018.1	741	MYPT-75D, isoform C
3L	NT_037436.4	18667435	18667984	+	8674004	CG42495	Dmel_CG42495	NP_001163464.1	142	uncharacterized protein Dmel_CG42495
3L	NT_037436.4	18669034	18673011	-	59172	Capr	Dmel_CG18811	NP_652671.1	961	caprin, isoform A
3L	NT_037436.4	18669034	18673011	-	59172	Capr	Dmel_CG18811	NP_001287107.1	961	caprin, isoform B
3L	NT_037436.4	18673518	18675342	-	40033	GNBP2	Dmel_CG4144	NP_524141.1	461	Gram-negative bacteria binding protein 2, isoform B
3L	NT_037436.4	18673518	18674948	-	40033	GNBP2	Dmel_CG4144	NP_730351.1	410	Gram-negative bacteria binding protein 2, isoform D
3L	NT_037436.4	18673518	18675255	-	40033	GNBP2	Dmel_CG4144	NP_730350.1	432	Gram-negative bacteria binding protein 2, isoform A
3L	NT_037436.4	18676006	18677776	+	40034	GNBP1	Dmel_CG6895	NP_524142.2	492	Gram-negative bacteria binding protein 1
3L	NT_037436.4	18680409	18680779	+	5740610	CG34254	Dmel_CG34254	NP_001097637.1	105	uncharacterized protein Dmel_CG34254
3L	NT_037436.4	18681098	18681688	-	40035	Sgf11	Dmel_CG13379	NP_001097638.1	196	SAGA associated factor 11kDa
3L	NT_037436.4	18682277	18682763	+	326199	CG32202	Dmel_CG32202	NP_730354.2	141	uncharacterized protein Dmel_CG32202
3L	NT_037436.4	18683219	18683901	-	40036	Chmp1	Dmel_CG4108	NP_001287108.1	203	charged multivesicular body protein 1, isoform B
3L	NT_037436.4	18683219	18683901	-	40036	Chmp1	Dmel_CG4108	NP_649051.3	203	charged multivesicular body protein 1, isoform A
3L	NT_037436.4	18684542	18686293	-	40037	Cyp12c1	Dmel_CG4120	NP_001287109.1	524	Cyp12c1, isoform B
3L	NT_037436.4	18684542	18686293	-	40037	Cyp12c1	Dmel_CG4120	NP_649052.1	524	Cyp12c1, isoform A
3L	NT_037436.4	18694524	18695520	+	40038	CG6893	Dmel_CG6893	NP_649053.2	250	CG6893
3L	NT_037436.4	18697163	18698271	-	40039	Dic4	Dmel_CG18363	NP_001262021.1	302	dicarboxylate carrier 4, isoform C
3L	NT_037436.4	18697163	18698271	-	40039	Dic4	Dmel_CG18363	NP_649054.1	302	dicarboxylate carrier 4, isoform A
3L	NT_037436.4	18697620	18698271	-	40039	Dic4	Dmel_CG18363	NP_001262020.1	173	dicarboxylate carrier 4, isoform B
3L	NT_037436.4	18722330	18723127	-	40040	CG12477	Dmel_CG12477	NP_649055.1	265	uncharacterized protein Dmel_CG12477
3L	NT_037436.4	18744509	18745645	+	40041	CG6885	Dmel_CG6885	NP_649056.1	378	CG6885
3L	NT_037436.4	18745903	18746488	+	40042	MED11	Dmel_CG6884	NP_649057.1	176	mediator complex subunit 11
3L	NT_037436.4	18746656	18748308	-	40043	Nufip	Dmel_CG4076	NP_649058.1	511	nufip
3L	NT_037436.4	18748818	18750386	+	40044	Atg3	Dmel_CG6877	NP_649059.1	330	Autophagy-related 3
3L	NT_037436.4	18752746	18764385	-	40045	ftz-f1	Dmel_CG4059	NP_001303366.1	853	ftz transcription factor 1, isoform D
3L	NT_037436.4	18752746	18764385	-	40045	ftz-f1	Dmel_CG4059	NP_730359.1	803	ftz transcription factor 1, isoform A
3L	NT_037436.4	18752746	18798731	-	40045	ftz-f1	Dmel_CG4059	NP_524143.2	1027	ftz transcription factor 1, isoform B
3L	NT_037436.4	18752746	18764385	-	40045	ftz-f1	Dmel_CG4059	NP_001246824.1	803	ftz transcription factor 1, isoform C
3L	NT_037436.4	18802782	18809412	-	40046	CG14073	Dmel_CG14073	NP_649060.1	2133	uncharacterized protein Dmel_CG14073, isoform B
3L	NT_037436.4	18802782	18809412	-	40046	CG14073	Dmel_CG14073	NP_001262022.1	2133	uncharacterized protein Dmel_CG14073, isoform C
3L	NT_037436.4	18821307	18821972	+	40047	HipHop	Dmel_CG6874	NP_649061.1	221	HP1-HOAP-interacting protein, isoform A
3L	NT_037436.4	18821307	18821972	+	40047	HipHop	Dmel_CG6874	NP_730362.1	221	HP1-HOAP-interacting protein, isoform B
3L	NT_037436.4	18822786	18827898	+	40048	Cat	Dmel_CG6871	NP_536731.1	506	catalase
3L	NT_037436.4	18829223	18831954	-	40049	Indy	Dmel_CG3979	NP_730364.1	572	I\'m not dead yet, isoform C
3L	NT_037436.4	18829223	18846059	-	40049	Indy	Dmel_CG3979	NP_730363.2	590	I\'m not dead yet, isoform B
3L	NT_037436.4	18829223	18831954	-	40049	Indy	Dmel_CG3979	NP_001163465.1	572	I\'m not dead yet, isoform D
3L	NT_037436.4	18829223	18831954	-	40049	Indy	Dmel_CG3979	NP_524150.1	572	I\'m not dead yet, isoform A
3L	NT_037436.4	18863721	18865421	+	40050	CG6865	Dmel_CG6865	NP_001246825.1	285	CG6865
3L	NT_037436.4	18866339	18867349	+	40051	CG14074	Dmel_CG14074	NP_001246826.1	336	uncharacterized protein Dmel_CG14074
3L	NT_037436.4	18867880	18868804	+	40052	Dysb	Dmel_CG6856	NP_649064.1	288	dysbindin, isoform A
3L	NT_037436.4	18867880	18868804	+	40052	Dysb	Dmel_CG6856	NP_001262023.1	288	dysbindin, isoform B
3L	NT_037436.4	18869503	18869972	+	40053	CG6852	Dmel_CG6852	NP_649065.1	114	CG6852, isoform A
3L	NT_037436.4	18869503	18869972	+	40053	CG6852	Dmel_CG6852	NP_001246827.1	114	CG6852, isoform C
3L	NT_037436.4	18870308	18870852	+	5740347	Blos3	Dmel_CG34255	NP_001097640.1	144	biogenesis of lysosome-related organelles complex 1, subunit 3
3L	NT_037436.4	18870679	18872484	-	40054	Rad9	Dmel_CG3945	NP_649066.1	456	Rad9, isoform A
3L	NT_037436.4	18870896	18872484	-	40054	Rad9	Dmel_CG3945	NP_001097639.2	456	Rad9, isoform B
3L	NT_037436.4	18872950	18877779	+	40055	Ugt	Dmel_CG6850	NP_524151.2	1548	UDP-glucose-glycoprotein glucosyltransferase
3L	NT_037436.4	18879087	18882390	-	40056	CG3961	Dmel_CG3961	NP_001262024.1	666	CG3961, isoform E
3L	NT_037436.4	18879087	18887619	-	40056	CG3961	Dmel_CG3961	NP_649067.2	704	CG3961, isoform C
3L	NT_037436.4	18879087	18882390	-	40056	CG3961	Dmel_CG3961	NP_730370.2	654	CG3961, isoform D
3L	NT_037436.4	18879087	18887619	-	40056	CG3961	Dmel_CG3961	NP_730369.1	704	CG3961, isoform A
3L	NT_037436.4	18892383	18893083	+	40057	NijB	Dmel_CG11637	NP_649068.1	181	ninjurin B
3L	NT_037436.4	18893342	18898175	-	40059	CG3902	Dmel_CG3902	NP_649069.2	414	CG3902
3L	NT_037436.4	18899320	18899769	+	40060	RpL26	Dmel_CG6846	NP_649070.1	149	ribosomal protein L26, isoform A
3L	NT_037436.4	18899320	18899769	+	40060	RpL26	Dmel_CG6846	NP_001262025.1	149	ribosomal protein L26, isoform B
3L	NT_037436.4	18899320	18899769	+	40060	RpL26	Dmel_CG6846	NP_001303372.1	149	ribosomal protein L26, isoform C
3L	NT_037436.4	18900901	18901472	-	40061	arx	Dmel_CG3893	NP_649071.1	167	asterix
3L	NT_037436.4	18901731	18902909	+	40062	CG6843	Dmel_CG6843	NP_649072.1	366	CG6843
3L	NT_037436.4	18903145	18904794	-	40063	CSN1b	Dmel_CG3889	NP_524152.2	525	COP9 signalosome subunit 1b
3L	NT_037436.4	18905494	18908510	+	40064	CG6841	Dmel_CG6841	NP_001303371.1	931	CG6841, isoform B
3L	NT_037436.4	18905494	18908510	+	40064	CG6841	Dmel_CG6841	NP_649073.1	931	CG6841, isoform A
3L	NT_037436.4	18908544	18911182	-	40065	Ir75d	Dmel_CG14076	NP_649074.2	675	ionotropic receptor 75d
3L	NT_037436.4	18913033	18914070	-	40066	CG14077	Dmel_CG14077	NP_649075.1	289	uncharacterized protein Dmel_CG14077, isoform B
3L	NT_037436.4	18913033	18914070	-	40066	CG14077	Dmel_CG14077	NP_001246828.1	289	uncharacterized protein Dmel_CG14077, isoform C
3L	NT_037436.4	18917581	18919227	+	40067	CG6839	Dmel_CG6839	NP_649076.1	430	CG6839
3L	NT_037436.4	18919224	18920300	-	40068	CG18223	Dmel_CG18223	NP_649077.1	322	uncharacterized protein Dmel_CG18223, isoform A
3L	NT_037436.4	18920004	18920300	-	40068	CG18223	Dmel_CG18223	NP_001262026.1	98	uncharacterized protein Dmel_CG18223, isoform C
3L	NT_037436.4	18920564	18922092	-	40069	CG3819	Dmel_CG3819	NP_649078.1	423	CG3819, isoform A
3L	NT_037436.4	18920564	18922092	-	40069	CG3819	Dmel_CG3819	NP_001262027.1	423	CG3819, isoform B
3L	NT_037436.4	18923808	18932865	-	317913	CG32204	Dmel_CG32204	NP_001097641.1	368	uncharacterized protein Dmel_CG32204
3L	NT_037436.4	18925169	18926086	+	12797937	CG43049	Dmel_CG43049	NP_001246830.1	207	uncharacterized protein Dmel_CG43049, isoform B
3L	NT_037436.4	18925169	18926086	+	12797937	CG43049	Dmel_CG43049	NP_001246829.1	213	uncharacterized protein Dmel_CG43049, isoform A
3L	NT_037436.4	18953763	18955335	+	40070	CG6836	Dmel_CG6836	NP_649079.2	328	CG6836
3L	NT_037436.4	18985014	18985481	+	40071	CG14075	Dmel_CG14075	NP_649080.1	155	uncharacterized protein Dmel_CG14075
3L	NT_037436.4	18986059	18988158	-	40072	CG11619	Dmel_CG11619	NP_649081.1	699	uncharacterized protein Dmel_CG11619
3L	NT_037436.4	18988898	18989722	-	5740297	CG34256	Dmel_CG34256	NP_001097642.2	168	uncharacterized protein Dmel_CG34256
3L	NT_037436.4	18990827	18993139	-	40073	CG18135	Dmel_CG18135	NP_788526.1	770	uncharacterized protein Dmel_CG18135, isoform D
3L	NT_037436.4	18990827	18992776	-	40073	CG18135	Dmel_CG18135	NP_001262028.1	649	uncharacterized protein Dmel_CG18135, isoform E
3L	NT_037436.4	18990827	18993962	-	40073	CG18135	Dmel_CG18135	NP_788525.1	711	uncharacterized protein Dmel_CG18135, isoform C
3L	NT_037436.4	18990827	18998012	-	40073	CG18135	Dmel_CG18135	NP_788524.1	636	uncharacterized protein Dmel_CG18135, isoform B
3L	NT_037436.4	18990827	18995493	-	40073	CG18135	Dmel_CG18135	NP_649082.2	653	uncharacterized protein Dmel_CG18135, isoform A
3L	NT_037436.4	18998523	19000520	-	40074	CG3808	Dmel_CG3808	NP_649083.2	615	CG3808
3L	NT_037436.4	19001082	19003086	-	40075	SmydA-2	Dmel_CG18136	NP_649084.1	530	SET and MYND domain containing, arthropod-specific, member 2
3L	NT_037436.4	19004923	19044367	-	44843	nkd	Dmel_CG11614	NP_524788.2	928	naked cuticle, isoform A
3L	NT_037436.4	19004923	19044367	-	44843	nkd	Dmel_CG11614	NP_001262030.1	806	naked cuticle, isoform C
3L	NT_037436.4	19005671	19044367	-	44843	nkd	Dmel_CG11614	NP_001262029.1	553	naked cuticle, isoform B
3L	NT_037436.4	19050791	19052026	-	40078	Acp76A	Dmel_CG3801	NP_001246831.1	387	accessory gland protein 76A, isoform B
3L	NT_037436.4	19050791	19052026	-	40078	Acp76A	Dmel_CG3801	NP_524153.1	388	accessory gland protein 76A, isoform A
3L	NT_037436.4	19053166	19053297	-	12797938	CG43407	Dmel_CG43407	NP_001246832.1	43	uncharacterized protein Dmel_CG43407, isoform A
3L	NT_037436.4	19053166	19053297	-	12797938	CG43407	Dmel_CG43407	NP_001287110.1	43	uncharacterized protein Dmel_CG43407, isoform B
3L	NT_037436.4	19060275	19062448	-	40079	CG3797	Dmel_CG3797	NP_649085.1	636	CG3797, isoform A
3L	NT_037436.4	19060275	19062448	-	40079	CG3797	Dmel_CG3797	NP_001287111.1	636	CG3797, isoform B
3L	NT_037436.4	19063701	19065609	+	40080	CG6812	Dmel_CG6812	NP_649086.2	327	CG6812
3L	NT_037436.4	19068654	19085723	-	40081	Mkp3	Dmel_CG14080	NP_001262031.1	497	Mitogen-activated protein kinase phosphatase 3, isoform C
3L	NT_037436.4	19068912	19069992	-	40081	Mkp3	Dmel_CG14080	NP_730385.1	241	Mitogen-activated protein kinase phosphatase 3, isoform A
3L	NT_037436.4	19068912	19085723	-	40081	Mkp3	Dmel_CG14080	NP_001262032.1	411	Mitogen-activated protein kinase phosphatase 3, isoform D
3L	NT_037436.4	19068912	19085723	-	40081	Mkp3	Dmel_CG14080	NP_649087.1	411	Mitogen-activated protein kinase phosphatase 3, isoform B
3L	NT_037436.4	19092810	19094564	+	40083	MESR6	Dmel_CG6818	NP_524154.2	470	misexpression suppressor of ras 6, isoform A
3L	NT_037436.4	19092810	19094564	+	40083	MESR6	Dmel_CG6818	NP_001262033.1	484	misexpression suppressor of ras 6, isoform B
3L	NT_037436.4	19095477	19096142	-	40084	CG11577	Dmel_CG11577	NP_649089.2	221	uncharacterized protein Dmel_CG11577
3L	NT_037436.4	19096652	19097632	-	40085	CG10424	Dmel_CG10424	NP_649090.1	300	uncharacterized protein Dmel_CG10424
3L	NT_037436.4	19098163	19099030	+	40086	CG14079	Dmel_CG14079	NP_649091.1	269	uncharacterized protein Dmel_CG14079
3L	NT_037436.4	19099481	19100269	-	40087	Gem2	Dmel_CG10419	NP_649092.1	245	Gemin2, isoform A
3L	NT_037436.4	19099481	19100269	-	40087	Gem2	Dmel_CG10419	NP_001262034.1	245	Gemin2, isoform B
3L	NT_037436.4	19107104	19112419	-	40088	CG14082	Dmel_CG14082	NP_001262035.1	530	uncharacterized protein Dmel_CG14082, isoform D
3L	NT_037436.4	19107275	19112419	-	40088	CG14082	Dmel_CG14082	NP_001137970.2	473	uncharacterized protein Dmel_CG14082, isoform C
3L	NT_037436.4	19107275	19112419	-	40088	CG14082	Dmel_CG14082	NP_649093.2	473	uncharacterized protein Dmel_CG14082, isoform E
3L	NT_037436.4	19128528	19129665	-	317912	Spn75F	Dmel_CG32203	NP_001036614.1	356	serpin 75F
3L	NT_037436.4	19143866	19146286	-	40090	fz2	Dmel_CG9739	NP_001262037.1	806	frizzled 2, isoform F
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_524155.1	694	frizzled 2, isoform A
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_730389.1	694	frizzled 2, isoform B
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_001262036.1	694	frizzled 2, isoform E
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_001097643.1	694	frizzled 2, isoform C
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_001262038.1	694	frizzled 2, isoform G
3L	NT_037436.4	19144202	19146286	-	40090	fz2	Dmel_CG9739	NP_001137971.1	694	frizzled 2, isoform D
3L	NT_037436.4	19236360	19237057	+	3772049	CG33647	Dmel_CG33647	NP_001027136.1	190	uncharacterized protein Dmel_CG33647
3L	NT_037436.4	19254298	19254979	-	40091	mRpL21	Dmel_CG9730	NP_001287112.1	201	mitochondrial ribosomal protein L21, isoform C
3L	NT_037436.4	19254298	19254979	-	40091	mRpL21	Dmel_CG9730	NP_649095.2	201	mitochondrial ribosomal protein L21, isoform A
3L	NT_037436.4	19254298	19254979	-	40091	mRpL21	Dmel_CG9730	NP_001262039.1	201	mitochondrial ribosomal protein L21, isoform B
3L	NT_037436.4	19255515	19256960	+	40092	rept	Dmel_CG9750	NP_524156.1	481	reptin, isoform A
3L	NT_037436.4	19255515	19256960	+	40092	rept	Dmel_CG9750	NP_001287113.1	481	reptin, isoform C
3L	NT_037436.4	19255515	19256960	+	40092	rept	Dmel_CG9750	NP_001262040.1	481	reptin, isoform B
3L	NT_037436.4	19258011	19260223	-	40093	nes	Dmel_CG9655	NP_788527.1	497	nessy, isoform C
3L	NT_037436.4	19258011	19260223	-	40093	nes	Dmel_CG9655	NP_524157.2	497	nessy, isoform A
3L	NT_037436.4	19258011	19260223	-	40093	nes	Dmel_CG9655	NP_730390.1	497	nessy, isoform B
3L	NT_037436.4	19261750	19262103	+	40094	Bet1	Dmel_CG14084	NP_730391.1	117	blocked early in transport 1, isoform B
3L	NT_037436.4	19261750	19262103	+	40094	Bet1	Dmel_CG14084	NP_649096.1	117	blocked early in transport 1, isoform A
3L	NT_037436.4	19262876	19264025	-	40095	Max	Dmel_CG9648	NP_001287114.1	161	Max, isoform D
3L	NT_037436.4	19262876	19264025	-	40095	Max	Dmel_CG9648	NP_001246833.1	161	Max, isoform C
3L	NT_037436.4	19262876	19264025	-	40095	Max	Dmel_CG9648	NP_649097.1	161	Max, isoform A
3L	NT_037436.4	19264497	19264944	+	7354371	CG42374	Dmel_CG42374	NP_001137972.1	129	uncharacterized protein Dmel_CG42374, isoform A
3L	NT_037436.4	19264497	19264944	+	7354371	CG42374	Dmel_CG42374	NP_001287115.1	129	uncharacterized protein Dmel_CG42374, isoform B
3L	NT_037436.4	19264956	19266747	+	7354371	CG42374	Dmel_CG42374	NP_001137973.1	213	CG9666, isoform D
3L	NT_037436.4	19264956	19266747	+	7354371	CG42374	Dmel_CG42374	NP_649098.2	213	CG9666, isoform A
3L	NT_037436.4	19266079	19266357	+	19835713	CG45081	Dmel_CG45081	NP_001287117.1	92	uncharacterized protein Dmel_CG45081, isoform B
3L	NT_037436.4	19266079	19266357	+	19835713	CG45081	Dmel_CG45081	NP_001287116.1	92	uncharacterized protein Dmel_CG45081, isoform A
3L	NT_037436.4	19266837	19268459	-	40097	CG9629	Dmel_CG9629	NP_649099.1	540	CG9629
3L	NT_037436.4	19269440	19273934	+	40099	CG14085	Dmel_CG14085	NP_649101.2	874	uncharacterized protein Dmel_CG14085
3L	NT_037436.4	19269772	19270642	-	40098	CG14088	Dmel_CG14088	NP_649100.2	289	uncharacterized protein Dmel_CG14088, partial
3L	NT_037436.4	19276593	19279824	+	40100	CG14086	Dmel_CG14086	NP_649102.3	212	uncharacterized protein Dmel_CG14086
3L	NT_037436.4	19280126	19280800	-	40101	CG14089	Dmel_CG14089	NP_649103.1	224	uncharacterized protein Dmel_CG14089
3L	NT_037436.4	19283223	19285391	-	40102	Gbs-76A	Dmel_CG9619	NP_001262044.1	681	glycogen binding subunit 76A, isoform C
3L	NT_037436.4	19283223	19285391	-	40102	Gbs-76A	Dmel_CG9619	NP_001287118.1	681	glycogen binding subunit 76A, isoform D
3L	NT_037436.4	19283223	19285391	-	40102	Gbs-76A	Dmel_CG9619	NP_001262043.1	681	glycogen binding subunit 76A, isoform B
3L	NT_037436.4	19283223	19285391	-	40102	Gbs-76A	Dmel_CG9619	NP_649104.1	681	glycogen binding subunit 76A, isoform A
3L	NT_037436.4	19297046	19298344	+	43927	fal	Dmel_CG9670	NP_536789.3	368	falten, isoform C
3L	NT_037436.4	19297046	19298344	+	43927	fal	Dmel_CG9670	NP_001137974.1	368	falten, isoform B
3L	NT_037436.4	19297046	19298344	+	43927	fal	Dmel_CG9670	NP_001303382.1	368	falten, isoform D
3L	NT_037436.4	19298926	19337430	-	40104	pip	Dmel_CG9614	NP_524158.2	413	pipe, isoform A
3L	NT_037436.4	19300506	19337430	-	40104	pip	Dmel_CG9614	NP_788529.1	401	pipe, isoform J
3L	NT_037436.4	19300967	19337430	-	40104	pip	Dmel_CG9614	NP_001163467.1	292	pipe, isoform M
3L	NT_037436.4	19301672	19337430	-	40104	pip	Dmel_CG9614	NP_788530.1	358	pipe, isoform I
3L	NT_037436.4	19302640	19337430	-	40104	pip	Dmel_CG9614	NP_788531.1	405	pipe, isoform H
3L	NT_037436.4	19303883	19337430	-	40104	pip	Dmel_CG9614	NP_788532.1	407	pipe, isoform G
3L	NT_037436.4	19305328	19337430	-	40104	pip	Dmel_CG9614	NP_788533.1	418	pipe, isoform D
3L	NT_037436.4	19306719	19337430	-	40104	pip	Dmel_CG9614	NP_788534.1	397	pipe, isoform F
3L	NT_037436.4	19308000	19337430	-	40104	pip	Dmel_CG9614	NP_730402.1	403	pipe, isoform C
3L	NT_037436.4	19309455	19337430	-	40104	pip	Dmel_CG9614	NP_788536.1	514	pipe, isoform L
3L	NT_037436.4	19309455	19337430	-	40104	pip	Dmel_CG9614	NP_788535.2	513	pipe, isoform N
3L	NT_037436.4	19310972	19337430	-	40104	pip	Dmel_CG9614	NP_788537.1	406	pipe, isoform K
3L	NT_037436.4	19343217	19386125	-	40105	CG32206	Dmel_CG32206	NP_788538.2	1278	uncharacterized protein Dmel_CG32206, isoform E
3L	NT_037436.4	19343271	19386125	-	40105	CG32206	Dmel_CG32206	NP_730403.2	1260	uncharacterized protein Dmel_CG32206, isoform B
3L	NT_037436.4	19387602	19390033	+	40109	ms(3)76Ba	Dmel_CG14087	NP_649109.3	769	male sterile (3) 76Ba
3L	NT_037436.4	19442103	19446118	-	318840	CG33062	Dmel_CG33062	NP_001189130.1	124	uncharacterized protein Dmel_CG33062, isoform B
3L	NT_037436.4	19442103	19446118	-	318840	CG33062	Dmel_CG33062	NP_788539.1	124	uncharacterized protein Dmel_CG33062, isoform A
3L	NT_037436.4	19447249	19449927	+	40111	Chd3	Dmel_CG9594	NP_649111.1	892	Chd3
3L	NT_037436.4	19464132	19464690	-	40112	CG14095	Dmel_CG14095	NP_649112.1	162	uncharacterized protein Dmel_CG14095
3L	NT_037436.4	19466606	19467029	-	40113	CG14096	Dmel_CG14096	NP_649113.1	122	uncharacterized protein Dmel_CG14096
3L	NT_037436.4	19467400	19467809	+	317919	CG32214	Dmel_CG32214	NP_730409.2	116	uncharacterized protein Dmel_CG32214, isoform B
3L	NT_037436.4	19467400	19467809	+	317919	CG32214	Dmel_CG32214	NP_001262045.1	116	uncharacterized protein Dmel_CG32214, isoform C
3L	NT_037436.4	19471729	19472177	-	317916	825-Oak	Dmel_CG32208	NP_730410.2	129	825-Oak
3L	NT_037436.4	19472543	19472993	+	40114	CG12519	Dmel_CG12519	NP_649114.2	131	uncharacterized protein Dmel_CG12519, isoform A
3L	NT_037436.4	19472543	19472993	+	40114	CG12519	Dmel_CG12519	NP_001262046.1	131	uncharacterized protein Dmel_CG12519, isoform B
3L	NT_037436.4	19475044	19475524	-	40115	CG18294	Dmel_CG18294	NP_649115.2	141	uncharacterized protein Dmel_CG18294
3L	NT_037436.4	19475890	19476338	+	317918	CG32213	Dmel_CG32213	NP_730413.2	129	uncharacterized protein Dmel_CG32213
3L	NT_037436.4	19484283	19486469	-	40116	brv1	Dmel_CG9472	NP_649116.1	728	brivido-1
3L	NT_037436.4	19487954	19488348	+	317917	CG32212	Dmel_CG32212	NP_730416.1	111	uncharacterized protein Dmel_CG32212
3L	NT_037436.4	19492416	19496712	-	40117	CG9449	Dmel_CG9449	NP_001262047.1	404	CG9449, isoform G
3L	NT_037436.4	19492416	19496712	-	40117	CG9449	Dmel_CG9449	NP_001262048.1	404	CG9449, isoform H
3L	NT_037436.4	19492416	19496712	-	40117	CG9449	Dmel_CG9449	NP_001137976.1	404	CG9449, isoform F
3L	NT_037436.4	19492416	19496673	-	40117	CG9449	Dmel_CG9449	NP_001262049.2	391	CG9449, isoform K
3L	NT_037436.4	19493470	19496712	-	40117	CG9449	Dmel_CG9449	NP_001137975.1	177	CG9449, isoform E
3L	NT_037436.4	19493470	19496673	-	40117	CG9449	Dmel_CG9449	NP_001287119.1	164	CG9449, isoform J
3L	NT_037436.4	19498478	19500720	-	40118	CG9451	Dmel_CG9451	NP_649118.1	410	CG9451, isoform A
3L	NT_037436.4	19498478	19500720	-	40118	CG9451	Dmel_CG9451	NP_001262050.1	410	CG9451, isoform B
3L	NT_037436.4	19501145	19503622	-	40119	CG9452	Dmel_CG9452	NP_649119.2	422	CG9452
3L	NT_037436.4	19517661	19518275	-	40120	Cpr76Ba	Dmel_CG9283	NP_649120.1	204	cuticular protein 76Ba
3L	NT_037436.4	19519695	19520291	+	40121	Cpr76Bb	Dmel_CG9290	NP_649121.1	198	cuticular protein 76Bb
3L	NT_037436.4	19521380	19527144	+	40122	Cpr76Bc	Dmel_CG9295	NP_001262051.1	424	cuticular protein 76Bc, isoform D
3L	NT_037436.4	19521380	19527144	+	40122	Cpr76Bc	Dmel_CG9295	NP_001097644.1	424	cuticular protein 76Bc, isoform C
3L	NT_037436.4	19533090	19537413	+	40123	Cpr76Bd	Dmel_CG9299	NP_001262053.1	1228	cuticular protein 76Bd, isoform D
3L	NT_037436.4	19533090	19537413	+	40123	Cpr76Bd	Dmel_CG9299	NP_001262052.1	1231	cuticular protein 76Bd, isoform C
3L	NT_037436.4	19533090	19537413	+	40123	Cpr76Bd	Dmel_CG9299	NP_001097645.1	1228	cuticular protein 76Bd, isoform B
3L	NT_037436.4	19538613	19542876	-	40124	CG9279	Dmel_CG9279	NP_649124.1	1339	CG9279, isoform C
3L	NT_037436.4	19538613	19542876	-	40124	CG9279	Dmel_CG9279	NP_730426.1	1339	CG9279, isoform B
3L	NT_037436.4	19543283	19543471	+	14462886	CG43885	Dmel_CG43885	NP_001262054.1	62	uncharacterized protein Dmel_CG43885
3L	NT_037436.4	19544482	19552267	-	40127	Ltn1	Dmel_CG32210	NP_730427.1	1747	listerin E3 ubiquitin protein ligase 1
3L	NT_037436.4	19545684	19547101	+	40126	Rcd7	Dmel_CG14098	NP_649125.1	397	reduction in Cnn dots 7, isoform B
3L	NT_037436.4	19545684	19547101	+	40126	Rcd7	Dmel_CG14098	NP_730429.2	397	reduction in Cnn dots 7, isoform A
3L	NT_037436.4	19552476	19554689	+	40128	CG9300	Dmel_CG9300	NP_649127.1	673	CG9300
3L	NT_037436.4	19568621	19574695	-	40129	Shal	Dmel_CG9262	NP_001262055.1	520	shaker cognate l, isoform C
3L	NT_037436.4	19568621	19574695	-	40129	Shal	Dmel_CG9262	NP_001097646.1	571	shaker cognate l, isoform B
3L	NT_037436.4	19572074	19574695	-	40129	Shal	Dmel_CG9262	NP_524159.1	490	shaker cognate l, isoform A
3L	NT_037436.4	19585474	19585915	-	40130	CG9231	Dmel_CG9231	NP_649128.1	125	CG9231, isoform A
3L	NT_037436.4	19585474	19585915	-	40130	CG9231	Dmel_CG9231	NP_001287120.1	125	CG9231, isoform B
3L	NT_037436.4	19586382	19588983	+	40131	CG9330	Dmel_CG9330	NP_649129.1	708	CG9330
3L	NT_037436.4	19589195	19590478	-	40132	CG14100	Dmel_CG14100	NP_649130.2	407	uncharacterized protein Dmel_CG14100
3L	NT_037436.4	19591302	19598236	-	40133	ash1	Dmel_CG8887	NP_001246834.1	2226	absent, small, or homeotic discs 1, isoform C
3L	NT_037436.4	19591302	19598236	-	40133	ash1	Dmel_CG8887	NP_524160.2	2226	absent, small, or homeotic discs 1, isoform B
3L	NT_037436.4	19599160	19601219	+	40134	Taf6	Dmel_CG32211	NP_524161.2	606	TBP-associated factor 6, isoform A
3L	NT_037436.4	19599160	19601219	+	40134	Taf6	Dmel_CG32211	NP_001262056.1	605	TBP-associated factor 6, isoform B
3L	NT_037436.4	19601773	19602981	+	40135	CG9368	Dmel_CG9368	NP_730433.1	177	CG9368, isoform B
3L	NT_037436.4	19601773	19602101	+	40135	CG9368	Dmel_CG9368	NP_001262057.1	87	CG9368, isoform D
3L	NT_037436.4	19601773	19602981	+	40135	CG9368	Dmel_CG9368	NP_730432.1	182	CG9368, isoform A
3L	NT_037436.4	19604675	19605251	-	40136	lush	Dmel_CG8807	NP_524162.1	153	lush, isoform A
3L	NT_037436.4	19604675	19605251	-	40136	lush	Dmel_CG8807	NP_001163468.1	153	lush, isoform B
3L	NT_037436.4	19606581	19608275	+	40137	CG9372	Dmel_CG9372	NP_649132.1	408	CG9372
3L	NT_037436.4	19608426	19612082	-	40138	Lon	Dmel_CG8798	NP_649133.1	1006	Lon protease, isoform A
3L	NT_037436.4	19608426	19612082	-	40138	Lon	Dmel_CG8798	NP_730435.2	1024	Lon protease, isoform C
3L	NT_037436.4	19612551	19613261	+	40139	CG9376	Dmel_CG9376	NP_649134.3	236	CG9376
3L	NT_037436.4	19613738	19618445	-	40140	l(3)76BDm	Dmel_CG8793	NP_001262058.1	1319	lethal (3) 76BDm, isoform B
3L	NT_037436.4	19613738	19618445	-	40140	l(3)76BDm	Dmel_CG8793	NP_649135.2	1319	lethal (3) 76BDm, isoform A
3L	NT_037436.4	19619179	19619835	+	40141	asf1	Dmel_CG9383	NP_524163.1	218	anti-silencing factor 1, isoform A
3L	NT_037436.4	19619179	19619835	+	40141	asf1	Dmel_CG9383	NP_001189131.1	218	anti-silencing factor 1, isoform B
3L	NT_037436.4	19620607	19624193	+	40142	ms(3)76Cc	Dmel_CG9392	NP_649136.1	1174	male sterile (3) 76Cc
3L	NT_037436.4	19625548	19632434	-	40143	wnd	Dmel_CG8789	NP_001189132.1	950	wallenda, isoform D
3L	NT_037436.4	19625548	19634380	-	40143	wnd	Dmel_CG8789	NP_788541.1	977	wallenda, isoform C
3L	NT_037436.4	19625548	19634380	-	40143	wnd	Dmel_CG8789	NP_788540.1	977	wallenda, isoform B
3L	NT_037436.4	19625548	19634380	-	40143	wnd	Dmel_CG8789	NP_649137.3	977	wallenda, isoform A
3L	NT_037436.4	19638451	19642667	-	40144	CG8786	Dmel_CG8786	NP_649138.2	376	CG8786, isoform B
3L	NT_037436.4	19639573	19642667	-	40144	CG8786	Dmel_CG8786	NP_001137979.2	448	CG8786, isoform G
3L	NT_037436.4	19639573	19642667	-	40144	CG8786	Dmel_CG8786	NP_001137978.1	448	CG8786, isoform C
3L	NT_037436.4	19640488	19642667	-	40144	CG8786	Dmel_CG8786	NP_001137980.2	365	CG8786, isoform F
3L	NT_037436.4	19647394	19649760	-	40145	Oat	Dmel_CG8782	NP_649139.1	431	ornithine aminotransferase precursor
3L	NT_037436.4	19650968	19663395	-	40146	tey	Dmel_CG8780	NP_001137981.1	822	teyrha-meyrha, isoform B
3L	NT_037436.4	19650968	19663395	-	40146	tey	Dmel_CG8780	NP_001262059.1	793	teyrha-meyrha, isoform C
3L	NT_037436.4	19650968	19657314	-	40146	tey	Dmel_CG8780	NP_001262060.1	745	teyrha-meyrha, isoform D
3L	NT_037436.4	19651222	19663395	-	40146	tey	Dmel_CG8780	NP_649140.1	717	teyrha-meyrha, isoform A
3L	NT_037436.4	19684832	19687235	-	40147	CG8765	Dmel_CG8765	NP_649141.1	690	CG8765, isoform A
3L	NT_037436.4	19684832	19686907	-	40147	CG8765	Dmel_CG8765	NP_730439.2	600	CG8765, isoform B
3L	NT_037436.4	19684832	19687235	-	40147	CG8765	Dmel_CG8765	NP_001262061.1	688	CG8765, isoform C
3L	NT_037436.4	19687728	19689658	+	40148	Gbeta76C	Dmel_CG8770	NP_523720.2	346	G protein beta-subunit 76C
3L	NT_037436.4	19690506	19695024	-	40149	verm	Dmel_CG8756	NP_001163469.1	555	vermiform, isoform I
3L	NT_037436.4	19690506	19695024	-	40149	verm	Dmel_CG8756	NP_730441.1	531	vermiform, isoform H
3L	NT_037436.4	19690506	19695024	-	40149	verm	Dmel_CG8756	NP_730442.2	525	vermiform, isoform G
3L	NT_037436.4	19701351	19707474	-	40150	serp	Dmel_CG32209	NP_001262062.1	541	serpentine, isoform C
3L	NT_037436.4	19701351	19707474	-	40150	serp	Dmel_CG32209	NP_730444.1	541	serpentine, isoform B
3L	NT_037436.4	19715269	19718068	-	40152	Trpml	Dmel_CG8743	NP_649145.1	652	transient receptor potential cation channel, mucolipin
3L	NT_037436.4	19720444	19726815	-	40153	CG42637	Dmel_CG42637	NP_524165.2	1525	uncharacterized protein Dmel_CG42637, isoform A
3L	NT_037436.4	19720444	19726815	-	40153	CG42637	Dmel_CG42637	NP_001007097.1	1525	uncharacterized protein Dmel_CG42637, isoform B
3L	NT_037436.4	19720444	19726815	-	40153	CG42637	Dmel_CG42637	NP_001007096.1	1525	uncharacterized protein Dmel_CG42637, isoform C
3L	NT_037436.4	19729416	19730222	+	8674063	CG42529	Dmel_CG42529	NP_001163471.1	268	uncharacterized protein Dmel_CG42529
3L	NT_037436.4	19746685	19749484	-	8673965	CG42638	Dmel_CG42638	NP_001163472.1	652	uncharacterized protein Dmel_CG42638
3L	NT_037436.4	19751860	19758230	-	8674026	Gyc76C	Dmel_CG42636	NP_001262063.1	1525	guanylyl cyclase at 76C, isoform D
3L	NT_037436.4	19751860	19758230	-	8674026	Gyc76C	Dmel_CG42636	NP_001163475.1	1525	guanylyl cyclase at 76C, isoform C
3L	NT_037436.4	19751860	19758230	-	8674026	Gyc76C	Dmel_CG42636	NP_001163474.1	1525	guanylyl cyclase at 76C, isoform B
3L	NT_037436.4	19751860	19758230	-	8674026	Gyc76C	Dmel_CG42636	NP_001163473.1	1525	guanylyl cyclase at 76C, isoform A
3L	NT_037436.4	19760831	19761637	+	40154	ms(3)76Ca	Dmel_CG14101	NP_649146.1	268	male sterile (3) 76Ca
3L	NT_037436.4	19794910	19798739	+	40155	SREBP	Dmel_CG8522	NP_730449.1	1113	sterol regulatory element binding protein, isoform A
3L	NT_037436.4	19794910	19798739	+	40155	SREBP	Dmel_CG8522	NP_524166.2	1113	sterol regulatory element binding protein, isoform C
3L	NT_037436.4	19794910	19798739	+	40155	SREBP	Dmel_CG8522	NP_001262064.1	1113	sterol regulatory element binding protein, isoform D
3L	NT_037436.4	19794910	19798739	+	40155	SREBP	Dmel_CG8522	NP_730450.1	1113	sterol regulatory element binding protein, isoform B
3L	NT_037436.4	19799278	19803377	+	40157	Ir76a	Dmel_CG42584	NP_001097647.3	646	ionotropic receptor 76a, isoform E
3L	NT_037436.4	19799649	19801236	-	40156	CG14102	Dmel_CG14102	NP_649147.2	441	uncharacterized protein Dmel_CG14102
3L	NT_037436.4	19801542	19803377	+	40157	Ir76a	Dmel_CG42584	NP_649148.2	515	ionotropic receptor 76a, isoform A
3L	NT_037436.4	19801542	19802013	+	40157	Ir76a	Dmel_CG42584	NP_001137982.1	121	ionotropic receptor 76a, isoform D
3L	NT_037436.4	19801542	19803377	+	40157	Ir76a	Dmel_CG42584	NP_730452.2	515	ionotropic receptor 76a, isoform B
3L	NT_037436.4	19804002	19805029	-	40158	CG14103	Dmel_CG14103	NP_001262065.1	301	uncharacterized protein Dmel_CG14103, isoform B
3L	NT_037436.4	19804002	19805029	-	40158	CG14103	Dmel_CG14103	NP_649149.1	301	uncharacterized protein Dmel_CG14103, isoform A
3L	NT_037436.4	19805368	19806003	-	4379912	CG34116	Dmel_CG34116	NP_001036616.1	211	uncharacterized protein Dmel_CG34116
3L	NT_037436.4	19806202	19806790	+	40159	CG15881	Dmel_CG15881	NP_730454.2	136	uncharacterized protein Dmel_CG15881, isoform A
3L	NT_037436.4	19806321	19806790	+	40159	CG15881	Dmel_CG15881	NP_001287121.1	119	uncharacterized protein Dmel_CG15881, isoform C
3L	NT_037436.4	19806321	19806790	+	40159	CG15881	Dmel_CG15881	NP_649150.1	119	uncharacterized protein Dmel_CG15881, isoform B
3L	NT_037436.4	19806940	19807146	-	50259	CG14104	Dmel_CG14104	NP_652408.2	68	uncharacterized protein Dmel_CG14104
3L	NT_037436.4	19807937	19809820	+	40160	Kap-alpha1	Dmel_CG8548	NP_524167.1	543	karyopherin alpha1
3L	NT_037436.4	19810552	19813202	-	40161	Cyp305a1	Dmel_CG8733	NP_649151.1	504	Cyp305a1
3L	NT_037436.4	19813989	19815774	-	40162	cyc	Dmel_CG8727	NP_524168.2	413	cycle
3L	NT_037436.4	19816203	19817502	-	40163	Fibp	Dmel_CG8660	NP_996123.2	315	fibp, isoform E
3L	NT_037436.4	19816203	19817502	-	40163	Fibp	Dmel_CG8660	NP_996122.1	315	fibp, isoform B
3L	NT_037436.4	19816203	19817502	-	40163	Fibp	Dmel_CG8660	NP_996121.1	315	fibp, isoform C
3L	NT_037436.4	19816203	19817502	-	40163	Fibp	Dmel_CG8660	NP_001262066.1	315	fibp, isoform F
3L	NT_037436.4	19816662	19817502	-	40163	Fibp	Dmel_CG8660	NP_001262067.1	208	fibp, isoform G
3L	NT_037436.4	19818535	19829190	+	40164	Deaf1	Dmel_CG8567	NP_001034033.1	573	deformed epidermal autoregulatory factor-1, isoform B
3L	NT_037436.4	19818535	19829190	+	40164	Deaf1	Dmel_CG8567	NP_001262069.1	576	deformed epidermal autoregulatory factor-1, isoform D
3L	NT_037436.4	19818535	19829190	+	40164	Deaf1	Dmel_CG8567	NP_524169.1	576	deformed epidermal autoregulatory factor-1, isoform A
3L	NT_037436.4	19819191	19829190	+	40164	Deaf1	Dmel_CG8567	NP_001262070.1	536	deformed epidermal autoregulatory factor-1, isoform E
3L	NT_037436.4	19819191	19829190	+	40164	Deaf1	Dmel_CG8567	NP_001262068.1	539	deformed epidermal autoregulatory factor-1, isoform C
3L	NT_037436.4	19832076	19834092	-	40165	trc	Dmel_CG8637	NP_001262071.1	463	tricornered, isoform B
3L	NT_037436.4	19832076	19834092	-	40165	trc	Dmel_CG8637	NP_524170.2	459	tricornered, isoform A
3L	NT_037436.4	19834801	19836237	+	317924	CG32221	Dmel_CG32221	NP_730456.2	432	uncharacterized protein Dmel_CG32221
3L	NT_037436.4	19836676	19844862	+	44830	kto	Dmel_CG8491	NP_524786.1	2531	kohtalo, isoform A
3L	NT_037436.4	19843194	19844862	+	44830	kto	Dmel_CG8491	NP_001246835.1	534	kohtalo, isoform B
3L	NT_037436.4	19845589	19860611	+	40167	Papss	Dmel_CG8363	NP_730457.1	629	PAPS synthetase, isoform A
3L	NT_037436.4	19845589	19860611	+	40167	Papss	Dmel_CG8363	NP_730458.1	629	PAPS synthetase, isoform B
3L	NT_037436.4	19845589	19860611	+	40167	Papss	Dmel_CG8363	NP_001262072.1	629	PAPS synthetase, isoform G
3L	NT_037436.4	19845589	19860611	+	40167	Papss	Dmel_CG8363	NP_730459.1	629	PAPS synthetase, isoform C
3L	NT_037436.4	19847478	19860611	+	40167	Papss	Dmel_CG8363	NP_730460.1	657	PAPS synthetase, isoform D
3L	NT_037436.4	19848354	19860611	+	40167	Papss	Dmel_CG8363	NP_001262073.1	630	PAPS synthetase, isoform H
3L	NT_037436.4	19848354	19860611	+	40167	Papss	Dmel_CG8363	NP_524171.2	630	PAPS synthetase, isoform E
3L	NT_037436.4	19848354	19860611	+	40167	Papss	Dmel_CG8363	NP_001036617.1	630	PAPS synthetase, isoform F
3L	NT_037436.4	19868553	19870504	-	40168	Rab8	Dmel_CG8287	NP_001246837.1	207	Rab8, isoform C
3L	NT_037436.4	19868553	19870504	-	40168	Rab8	Dmel_CG8287	NP_524172.1	207	Rab8, isoform A
3L	NT_037436.4	19868553	19869526	-	40168	Rab8	Dmel_CG8287	NP_001246836.1	172	Rab8, isoform B
3L	NT_037436.4	19873892	19881067	+	40169	Usp32	Dmel_CG8334	NP_001262074.1	1715	ubiquitin specific protease 32, isoform B
3L	NT_037436.4	19873892	19881067	+	40169	Usp32	Dmel_CG8334	NP_001262077.1	1712	ubiquitin specific protease 32, isoform E
3L	NT_037436.4	19873892	19881067	+	40169	Usp32	Dmel_CG8334	NP_001262076.1	1693	ubiquitin specific protease 32, isoform D
3L	NT_037436.4	19873892	19881067	+	40169	Usp32	Dmel_CG8334	NP_001262075.1	1696	ubiquitin specific protease 32, isoform C
3L	NT_037436.4	19882449	19910079	-	40170	Mi-2	Dmel_CG8103	NP_649154.2	1982	Mi-2, isoform A
3L	NT_037436.4	19882449	19910079	-	40170	Mi-2	Dmel_CG8103	NP_001014591.1	1983	Mi-2, isoform B
3L	NT_037436.4	19882449	19888710	-	40170	Mi-2	Dmel_CG8103	NP_001262078.1	1973	Mi-2, isoform D
3L	NT_037436.4	19882449	19910079	-	40170	Mi-2	Dmel_CG8103	NP_001163476.1	1982	Mi-2, isoform C
3L	NT_037436.4	19891524	19894703	-	40171	Su(Tpl)	Dmel_CG32217	NP_649155.3	1059	Su(Tpl), isoform A
3L	NT_037436.4	19891524	19894703	-	40171	Su(Tpl)	Dmel_CG32217	NP_001163477.1	1059	Su(Tpl), isoform B
3L	NT_037436.4	19891524	19894703	-	40171	Su(Tpl)	Dmel_CG32217	NP_001287122.1	1059	Su(Tpl), isoform C
3L	NT_037436.4	19910478	19912328	+	40172	Prp3	Dmel_CG7757	NP_649156.1	598	precursor RNA processing 3, isoform A
3L	NT_037436.4	19910688	19912328	+	40172	Prp3	Dmel_CG7757	NP_730463.1	528	precursor RNA processing 3, isoform B
3L	NT_037436.4	19912591	19913629	-	40173	Mtr3	Dmel_CG8025	NP_649157.1	326	Mtr3
3L	NT_037436.4	19915191	19918019	+	40174	Rpn1	Dmel_CG7762	NP_649158.1	919	regulatory particle non-ATPase 1
3L	NT_037436.4	19919001	19922988	-	48071	Su(z)12	Dmel_CG8013	NP_730465.1	900	Su(z)12, isoform B
3L	NT_037436.4	19919366	19922988	-	48071	Su(z)12	Dmel_CG8013	NP_652059.1	855	Su(z)12, isoform A
3L	NT_037436.4	19923822	19924370	+	40176	Pfdn6	Dmel_CG7770	NP_649159.1	125	prefoldin 6, isoform A
3L	NT_037436.4	19923822	19924370	+	40176	Pfdn6	Dmel_CG7770	NP_001262079.1	125	prefoldin 6, isoform B
3L	NT_037436.4	19925061	19926879	+	40177	Grasp65	Dmel_CG7809	NP_649160.1	460	Grasp65
3L	NT_037436.4	19927555	19928437	-	40178	CG8004	Dmel_CG8004	NP_649161.1	269	CG8004
3L	NT_037436.4	19930831	19932178	+	40179	RhoGDI	Dmel_CG7823	NP_001262080.1	201	RhoGDI, isoform B
3L	NT_037436.4	19930831	19932178	+	40179	RhoGDI	Dmel_CG7823	NP_649162.1	201	RhoGDI, isoform A
3L	NT_037436.4	19949422	19976995	+	40180	Ac76E	Dmel_CG7978	NP_524173.2	1307	adenylyl cyclase 76E, isoform A
3L	NT_037436.4	19949422	19976995	+	40180	Ac76E	Dmel_CG7978	NP_001246838.1	1312	adenylyl cyclase 76E, isoform B
3L	NT_037436.4	19950504	19951072	-	317922	CG32219	Dmel_CG32219	NP_730469.1	150	uncharacterized protein Dmel_CG32219
3L	NT_037436.4	19951348	19951956	-	5740493	CG34258	Dmel_CG34258	NP_001097648.1	165	uncharacterized protein Dmel_CG34258
3L	NT_037436.4	19952180	19952790	-	3772611	CG33710	Dmel_CG33710	NP_001027137.1	162	uncharacterized protein Dmel_CG33710
3L	NT_037436.4	19952971	19953658	-	10178928	CG42655	Dmel_CG42655	NP_001189133.2	154	uncharacterized protein Dmel_CG42655
3L	NT_037436.4	19953795	19954510	-	10178805	CG42654	Dmel_CG42654	NP_001189134.2	161	uncharacterized protein Dmel_CG42654, isoform C
3L	NT_037436.4	19953982	19954510	-	10178805	CG42654	Dmel_CG42654	NP_001262081.1	94	uncharacterized protein Dmel_CG42654, isoform B
3L	NT_037436.4	19955100	19955752	-	7354413	CG42263	Dmel_CG42263	NP_001137983.2	162	uncharacterized protein Dmel_CG42263
3L	NT_037436.4	19979188	19979762	-	40181	CG14182	Dmel_CG14182	NP_001262082.1	168	uncharacterized protein Dmel_CG14182, isoform B
3L	NT_037436.4	19979188	19979762	-	40181	CG14182	Dmel_CG14182	NP_649163.1	168	uncharacterized protein Dmel_CG14182, isoform A
3L	NT_037436.4	19979188	19979568	-	40181	CG14182	Dmel_CG14182	NP_001262083.1	126	uncharacterized protein Dmel_CG14182, isoform C
3L	NT_037436.4	19979188	19979762	-	40181	CG14182	Dmel_CG14182	NP_001287123.1	168	uncharacterized protein Dmel_CG14182, isoform D
3L	NT_037436.4	19981685	19984191	+	40182	CG17732	Dmel_CG17732	NP_001189135.1	790	uncharacterized protein Dmel_CG17732
3L	NT_037436.4	19984496	19985775	-	40183	hale	Dmel_CG7570	NP_649165.1	406	hale-bopp
3L	NT_037436.4	19986164	19988032	+	40184	schuy	Dmel_CG17736	NP_649166.1	601	schumacher-levy
3L	NT_037436.4	19988069	19988743	-	317923	Csas	Dmel_CG32220	NP_730474.1	187	CMP-sialic acid synthase
3L	NT_037436.4	19989954	19990630	-	40185	fln	Dmel_CG7445	NP_524174.1	182	flightin, isoform A
3L	NT_037436.4	19989954	19990630	-	40185	fln	Dmel_CG7445	NP_001262084.1	182	flightin, isoform B
3L	NT_037436.4	19994625	19995805	+	40187	CG7646	Dmel_CG7646	NP_649167.1	186	CG7646, isoform A
3L	NT_037436.4	19994625	19995805	+	40187	CG7646	Dmel_CG7646	NP_001287124.1	186	CG7646, isoform C
3L	NT_037436.4	19995443	19995805	+	40187	CG7646	Dmel_CG7646	NP_788542.1	78	CG7646, isoform B
3L	NT_037436.4	19996711	19997486	+	40186	Nca	Dmel_CG7641	NP_788543.1	190	neurocalcin
3L	NT_037436.4	19998220	20000157	-	40188	Gabat	Dmel_CG7433	NP_001287125.1	486	gamma-aminobutyric acid transaminase, isoform D
3L	NT_037436.4	19998220	20000157	-	40188	Gabat	Dmel_CG7433	NP_649168.2	486	gamma-aminobutyric acid transaminase, isoform A
3L	NT_037436.4	19998220	20000157	-	40188	Gabat	Dmel_CG7433	NP_730476.1	486	gamma-aminobutyric acid transaminase, isoform B
3L	NT_037436.4	19998220	20000157	-	40188	Gabat	Dmel_CG7433	NP_001163479.1	486	gamma-aminobutyric acid transaminase, isoform C
3L	NT_037436.4	20001167	20002159	+	40189	Tom20	Dmel_CG7654	NP_649169.3	171	translocase of outer membrane 20, isoform A
3L	NT_037436.4	20001167	20002159	+	40189	Tom20	Dmel_CG7654	NP_001262085.1	171	translocase of outer membrane 20, isoform B
3L	NT_037436.4	20002918	20004549	+	40190	CG7668	Dmel_CG7668	NP_730478.2	422	CG7668, isoform C
3L	NT_037436.4	20002918	20004549	+	40190	CG7668	Dmel_CG7668	NP_649170.1	422	CG7668, isoform A
3L	NT_037436.4	20008826	20024485	+	40191	kug	Dmel_CG7749	NP_001287126.1	4689	kugelei, isoform E
3L	NT_037436.4	20008826	20024485	+	40191	kug	Dmel_CG7749	NP_001027138.2	4699	kugelei, isoform D
3L	NT_037436.4	20008826	20024485	+	40191	kug	Dmel_CG7749	NP_649171.3	4689	kugelei, isoform C
3L	NT_037436.4	20024706	20027761	-	40192	CG14183	Dmel_CG14183	NP_649172.3	872	uncharacterized protein Dmel_CG14183
3L	NT_037436.4	20027967	20028952	-	40193	CG14184	Dmel_CG14184	NP_001189136.1	180	uncharacterized protein Dmel_CG14184, isoform B
3L	NT_037436.4	20027967	20028952	-	40193	CG14184	Dmel_CG14184	NP_649173.1	180	uncharacterized protein Dmel_CG14184, isoform A
3L	NT_037436.4	20074113	20075915	-	40195	sNPF-R	Dmel_CG7395	NP_001262086.1	600	short neuropeptide F receptor, isoform B
3L	NT_037436.4	20074113	20075915	-	40195	sNPF-R	Dmel_CG7395	NP_524176.1	600	short neuropeptide F receptor, isoform A
3L	NT_037436.4	20099024	20103360	-	40196	CG14186	Dmel_CG14186	NP_649174.1	704	uncharacterized protein Dmel_CG14186
3L	NT_037436.4	20106121	20107396	+	40197	CG14185	Dmel_CG14185	NP_649175.1	402	uncharacterized protein Dmel_CG14185
3L	NT_037436.4	20108784	20111437	-	40198	Ir76b	Dmel_CG7385	NP_649176.1	636	ionotropic receptor 76b
3L	NT_037436.4	20112354	20112825	-	40199	CG14187	Dmel_CG14187	NP_649177.1	126	uncharacterized protein Dmel_CG14187, isoform A
3L	NT_037436.4	20112354	20112825	-	40199	CG14187	Dmel_CG14187	NP_001262087.1	108	uncharacterized protein Dmel_CG14187, isoform B
3L	NT_037436.4	20124459	20126207	-	40200	CG7365	Dmel_CG7365	NP_001262088.1	424	CG7365, isoform B
3L	NT_037436.4	20124459	20126207	-	40200	CG7365	Dmel_CG7365	NP_649178.1	424	CG7365, isoform A
3L	NT_037436.4	20129309	20138887	+	40201	gig	Dmel_CG6975	NP_001262089.1	1844	gigas, isoform B
3L	NT_037436.4	20129309	20138887	+	40201	gig	Dmel_CG6975	NP_524177.1	1847	gigas, isoform A
3L	NT_037436.4	20130577	20131696	-	40202	obst-J	Dmel_CG7348	NP_649179.2	353	obstructor-J
3L	NT_037436.4	20132140	20133258	-	40203	CG7335	Dmel_CG7335	NP_649180.1	372	CG7335
3L	NT_037436.4	20139363	20140283	-	40204	CG7328	Dmel_CG7328	NP_649181.1	306	CG7328
3L	NT_037436.4	20151572	20164170	-	40205	CG42674	Dmel_CG42674	NP_001137986.1	1445	uncharacterized protein Dmel_CG42674, isoform D
3L	NT_037436.4	20151572	20164170	-	40205	CG42674	Dmel_CG42674	NP_649182.4	1661	uncharacterized protein Dmel_CG42674, isoform C
3L	NT_037436.4	20151572	20158593	-	40205	CG42674	Dmel_CG42674	NP_001262091.1	848	uncharacterized protein Dmel_CG42674, isoform G
3L	NT_037436.4	20151572	20192274	-	40205	CG42674	Dmel_CG42674	NP_001262090.1	1412	uncharacterized protein Dmel_CG42674, isoform F
3L	NT_037436.4	20151572	20164170	-	40205	CG42674	Dmel_CG42674	NP_001137984.1	1626	uncharacterized protein Dmel_CG42674, isoform A
3L	NT_037436.4	20151572	20192274	-	40205	CG42674	Dmel_CG42674	NP_001189137.1	1412	uncharacterized protein Dmel_CG42674, isoform E
3L	NT_037436.4	20151572	20164170	-	40205	CG42674	Dmel_CG42674	NP_001137985.1	1480	uncharacterized protein Dmel_CG42674, isoform B
3L	NT_037436.4	20188712	20189560	+	40207	Ssk	Dmel_CG6981	NP_730487.1	162	snakeskin, isoform B
3L	NT_037436.4	20188712	20189560	+	40207	Ssk	Dmel_CG6981	NP_649184.1	162	snakeskin, isoform A
3L	NT_037436.4	20200118	20200381	+	10178965	CG42833	Dmel_CG42833	NP_001189138.1	87	uncharacterized protein Dmel_CG42833
3L	NT_037436.4	20200490	20201597	-	40209	obst-F	Dmel_CG7306	NP_649186.1	326	obstructor-F
3L	NT_037436.4	20202198	20203602	-	40210	CG7298	Dmel_CG7298	NP_649187.3	369	CG7298
3L	NT_037436.4	20204671	20206001	-	40211	CG7290	Dmel_CG7290	NP_001262093.1	419	CG7290, isoform B
3L	NT_037436.4	20204671	20206001	-	40211	CG7290	Dmel_CG7290	NP_649188.1	419	CG7290, isoform A
3L	NT_037436.4	20207625	20208958	+	40212	CG6996	Dmel_CG6996	NP_649189.2	364	CG6996, isoform B
3L	NT_037436.4	20207625	20208958	+	40212	CG6996	Dmel_CG6996	NP_001262094.1	364	CG6996, isoform C
3L	NT_037436.4	20210683	20212033	-	40213	CG7017	Dmel_CG7017	NP_001262095.1	359	CG7017, isoform B
3L	NT_037436.4	20210683	20212033	-	40213	CG7017	Dmel_CG7017	NP_649190.1	359	CG7017, isoform A
3L	NT_037436.4	20218615	20220103	-	40214	CG6933	Dmel_CG6933	NP_001262097.1	363	CG6933, isoform D
3L	NT_037436.4	20218615	20220103	-	40214	CG6933	Dmel_CG6933	NP_730495.1	363	CG6933, isoform C
3L	NT_037436.4	20218615	20220103	-	40214	CG6933	Dmel_CG6933	NP_001262096.1	351	CG6933, isoform E
3L	NT_037436.4	20218615	20220351	-	40214	CG6933	Dmel_CG6933	NP_649191.1	351	CG6933, isoform A
3L	NT_037436.4	20218615	20220103	-	40214	CG6933	Dmel_CG6933	NP_730494.1	351	CG6933, isoform B
3L	NT_037436.4	20221852	20222917	+	40215	CG17145	Dmel_CG17145	NP_649192.2	334	uncharacterized protein Dmel_CG17145, isoform A
3L	NT_037436.4	20221852	20222917	+	40215	CG17145	Dmel_CG17145	NP_001262098.1	334	uncharacterized protein Dmel_CG17145, isoform B
3L	NT_037436.4	20224023	20225293	+	40216	CG17147	Dmel_CG17147	NP_001262099.1	337	uncharacterized protein Dmel_CG17147
3L	NT_037436.4	20226816	20229677	+	40217	Su(var)3-3	Dmel_CG17149	NP_649194.1	890	suppressor of variegation 3-3, isoform A
3L	NT_037436.4	20226816	20229677	+	40217	Su(var)3-3	Dmel_CG17149	NP_730497.1	890	suppressor of variegation 3-3, isoform B
3L	NT_037436.4	20226816	20229677	+	40217	Su(var)3-3	Dmel_CG17149	NP_001262100.1	870	suppressor of variegation 3-3, isoform C
3L	NT_037436.4	20231720	20233072	+	40218	CG13813	Dmel_CG13813	NP_649195.1	430	uncharacterized protein Dmel_CG13813
3L	NT_037436.4	20233868	20240495	-	40220	CG17233	Dmel_CG17233	NP_001246840.1	1464	uncharacterized protein Dmel_CG17233, isoform F
3L	NT_037436.4	20233868	20240495	-	40220	CG17233	Dmel_CG17233	NP_730500.1	1465	uncharacterized protein Dmel_CG17233, isoform C
3L	NT_037436.4	20233868	20240495	-	40220	CG17233	Dmel_CG17233	NP_730499.1	1173	uncharacterized protein Dmel_CG17233, isoform A
3L	NT_037436.4	20233868	20240495	-	40220	CG17233	Dmel_CG17233	NP_001246841.1	1443	uncharacterized protein Dmel_CG17233, isoform G
3L	NT_037436.4	20236225	20240495	-	40220	CG17233	Dmel_CG17233	NP_649196.3	772	uncharacterized protein Dmel_CG17233, isoform D
3L	NT_037436.4	20236225	20240495	-	40220	CG17233	Dmel_CG17233	NP_001246839.1	1007	uncharacterized protein Dmel_CG17233, isoform E
3L	NT_037436.4	20236225	20240495	-	40220	CG17233	Dmel_CG17233	NP_001246843.1	772	uncharacterized protein Dmel_CG17233, isoform I
3L	NT_037436.4	20236225	20240495	-	40220	CG17233	Dmel_CG17233	NP_001246842.1	1006	uncharacterized protein Dmel_CG17233, isoform H
3L	NT_037436.4	20242798	20243457	+	40221	Clc	Dmel_CG6948	NP_001262101.1	219	clathrin light chain, isoform D
3L	NT_037436.4	20242798	20243457	+	40221	Clc	Dmel_CG6948	NP_001163480.1	219	clathrin light chain, isoform B
3L	NT_037436.4	20242798	20243457	+	40221	Clc	Dmel_CG6948	NP_001163481.1	219	clathrin light chain, isoform C
3L	NT_037436.4	20242798	20243457	+	40221	Clc	Dmel_CG6948	NP_524178.2	219	clathrin light chain, isoform A
3L	NT_037436.4	20244167	20245138	+	40222	CG6951	Dmel_CG6951	NP_649197.1	203	CG6951, isoform A
3L	NT_037436.4	20244167	20245138	+	40222	CG6951	Dmel_CG6951	NP_730502.1	203	CG6951, isoform B
3L	NT_037436.4	20256371	20264150	+	40224	rdgC	Dmel_CG44746	NP_788544.2	746	retinal degeneration C, isoform H
3L	NT_037436.4	20256371	20264150	+	40224	rdgC	Dmel_CG44746	NP_536738.3	746	retinal degeneration C, isoform F
3L	NT_037436.4	20256371	20264150	+	40224	rdgC	Dmel_CG44746	NP_788545.3	746	retinal degeneration C, isoform G
3L	NT_037436.4	20260475	20264150	+	40224	rdgC	Dmel_CG44746	NP_788546.1	661	retinal degeneration C, isoform B
3L	NT_037436.4	20265814	20268561	+	326202	CG32228	Dmel_CG32228	NP_730504.1	915	uncharacterized protein Dmel_CG32228
3L	NT_037436.4	20269445	20279826	-	40225	gogo	Dmel_CG32227	NP_649200.2	1272	golden goal
3L	NT_037436.4	20273458	20275254	-	40226	CG17122	Dmel_CG17122	NP_730506.1	598	uncharacterized protein Dmel_CG17122
3L	NT_037436.4	20295845	20296900	-	40228	FRG1	Dmel_CG6480	NP_649202.1	262	FSHD region gene 1
3L	NT_037436.4	20297460	20302021	-	40229	Pex23	Dmel_CG32226	NP_730508.1	1350	peroxin 23
3L	NT_037436.4	20303233	20308826	+	40231	SCCRO4	Dmel_CG6597	NP_649204.2	248	squamous cell carcinoma-related oncogene 4 ortholog, isoform A
3L	NT_037436.4	20303233	20308826	+	40231	SCCRO4	Dmel_CG6597	NP_730510.2	248	squamous cell carcinoma-related oncogene 4 ortholog, isoform B
3L	NT_037436.4	20303233	20308826	+	40231	SCCRO4	Dmel_CG6597	NP_001287127.1	248	squamous cell carcinoma-related oncogene 4 ortholog, isoform E
3L	NT_037436.4	20304601	20306169	-	317926	CG32225	Dmel_CG32225	NP_730511.1	295	uncharacterized protein Dmel_CG32225
3L	NT_037436.4	20307750	20308826	+	40231	SCCRO4	Dmel_CG6597	NP_001189139.2	213	squamous cell carcinoma-related oncogene 4 ortholog, isoform D
3L	NT_037436.4	20310310	20312873	+	40232	polo	Dmel_CG12306	NP_524179.2	576	polo, isoform A
3L	NT_037436.4	20310310	20312873	+	40232	polo	Dmel_CG12306	NP_001014592.1	576	polo, isoform B
3L	NT_037436.4	20313793	20315547	+	40233	alphaSnap	Dmel_CG6625	NP_524180.1	292	alpha soluble NSF attachment protein
3L	NT_037436.4	20317773	20319891	+	40234	Spn77Ba	Dmel_CG6680	NP_001287128.1	450	serpin 77Ba, isoform C
3L	NT_037436.4	20317773	20319891	+	40234	Spn77Ba	Dmel_CG6680	NP_730512.2	450	serpin 77Ba, isoform B
3L	NT_037436.4	20317773	20319891	+	40234	Spn77Ba	Dmel_CG6680	NP_649205.3	450	serpin 77Ba, isoform A
3L	NT_037436.4	20321041	20322320	+	40235	Spn77Bb	Dmel_CG6663	NP_649206.1	362	serpin 77Bb
3L	NT_037436.4	20342738	20344179	+	40236	Spn77Bc	Dmel_CG6289	NP_001262103.1	416	serpin 77Bc, isoform B
3L	NT_037436.4	20342738	20344179	+	40236	Spn77Bc	Dmel_CG6289	NP_649207.1	416	serpin 77Bc, isoform A
3L	NT_037436.4	20346086	20347909	-	40239	Rbbp5	Dmel_CG5585	NP_649209.1	489	retinoblastoma binding protein 5
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_649210.1	438	eukaryotic release factor 1, isoform A
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_730520.1	438	eukaryotic release factor 1, isoform F
3L	NT_037436.4	20349121	20351978	+	40240	eRF1	Dmel_CG5605	NP_001262104.1	437	eukaryotic release factor 1, isoform H
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_788547.1	438	eukaryotic release factor 1, isoform G
3L	NT_037436.4	20349121	20353554	+	40240	eRF1	Dmel_CG5605	NP_001262105.1	447	eukaryotic release factor 1, isoform I
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_730518.1	438	eukaryotic release factor 1, isoform C
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_730519.1	438	eukaryotic release factor 1, isoform E
3L	NT_037436.4	20349121	20352889	+	40240	eRF1	Dmel_CG5605	NP_730517.1	438	eukaryotic release factor 1, isoform B
3L	NT_037436.4	20354226	20356533	+	40241	CG5618	Dmel_CG5618	NP_649211.1	510	CG5618, isoform A
3L	NT_037436.4	20355429	20356533	+	40241	CG5618	Dmel_CG5618	NP_996124.1	346	CG5618, isoform E
3L	NT_037436.4	20355429	20356533	+	40241	CG5618	Dmel_CG5618	NP_001262106.1	346	CG5618, isoform D
3L	NT_037436.4	20356897	20358141	+	40242	kin17	Dmel_CG5649	NP_649212.2	390	kin17
3L	NT_037436.4	20358512	20359820	+	40243	CG5665	Dmel_CG5665	NP_649213.2	376	CG5665, isoform B
3L	NT_037436.4	20358512	20359820	+	40243	CG5665	Dmel_CG5665	NP_001246844.1	395	CG5665, isoform C
3L	NT_037436.4	20359906	20361507	-	44915	DNApol-alpha60	Dmel_CG5553	NP_652001.2	533	DNA polymerase alpha 60kD
3L	NT_037436.4	20362040	20365918	-	40245	Toll-9	Dmel_CG5528	NP_001246846.1	900	Toll-9, isoform C
3L	NT_037436.4	20362040	20365918	-	40245	Toll-9	Dmel_CG5528	NP_001246845.1	826	Toll-9, isoform B
3L	NT_037436.4	20362040	20365918	-	40245	Toll-9	Dmel_CG5528	NP_649214.1	900	Toll-9, isoform A
3L	NT_037436.4	20367316	20369925	+	40246	in	Dmel_CG16993	NP_788548.1	869	inturned
3L	NT_037436.4	20370566	20371699	+	40247	CG13247	Dmel_CG13247	NP_649215.1	334	uncharacterized protein Dmel_CG13247
3L	NT_037436.4	20371792	20375487	-	40248	Ide	Dmel_CG5517	NP_524182.3	990	insulin degrading metalloproteinase
3L	NT_037436.4	20378460	20381882	+	40249	RhoBTB	Dmel_CG5701	NP_001262107.1	783	Rho-related BTB domain containing, isoform B
3L	NT_037436.4	20378460	20381698	+	40249	RhoBTB	Dmel_CG5701	NP_001262108.1	738	Rho-related BTB domain containing, isoform C
3L	NT_037436.4	20378460	20381698	+	40249	RhoBTB	Dmel_CG5701	NP_649216.2	745	Rho-related BTB domain containing, isoform A
3L	NT_037436.4	20382495	20384023	-	40250	CG5498	Dmel_CG5498	NP_730525.2	448	CG5498
3L	NT_037436.4	20384813	20391182	+	46234	fbl	Dmel_CG5725	NP_597678.1	417	fumble, isoform B
3L	NT_037436.4	20386524	20391182	+	46234	fbl	Dmel_CG5725	NP_524870.1	512	fumble, isoform E
3L	NT_037436.4	20387950	20391182	+	46234	fbl	Dmel_CG5725	NP_001246848.1	428	fumble, isoform G
3L	NT_037436.4	20387950	20391182	+	46234	fbl	Dmel_CG5725	NP_620550.1	419	fumble, isoform A
3L	NT_037436.4	20388671	20391182	+	46234	fbl	Dmel_CG5725	NP_730526.1	401	fumble, isoform C
3L	NT_037436.4	20388671	20391182	+	46234	fbl	Dmel_CG5725	NP_730527.1	401	fumble, isoform D
3L	NT_037436.4	20389916	20391182	+	46234	fbl	Dmel_CG5725	NP_001246847.1	342	fumble, isoform F
3L	NT_037436.4	20392045	20393481	-	40252	CG33969	Dmel_CG33969	NP_001034035.2	407	uncharacterized protein Dmel_CG33969, isoform C
3L	NT_037436.4	20392045	20393481	-	40252	CG33969	Dmel_CG33969	NP_001034034.1	410	uncharacterized protein Dmel_CG33969, isoform A
3L	NT_037436.4	20396851	20401255	-	43999	trbl	Dmel_CG5408	NP_524672.1	484	tribbles
3L	NT_037436.4	20407787	20410404	-	40254	CG13248	Dmel_CG13248	NP_649219.1	669	uncharacterized protein Dmel_CG13248
3L	NT_037436.4	20417232	20424222	+	40255	zye	Dmel_CG5847	NP_649220.1	2284	zye
3L	NT_037436.4	20424499	20425959	-	40256	CG5282	Dmel_CG5282	NP_649221.1	451	CG5282
3L	NT_037436.4	20426397	20427570	-	40257	CG5274	Dmel_CG5274	NP_649222.1	373	CG5274, isoform A
3L	NT_037436.4	20426397	20427570	-	40257	CG5274	Dmel_CG5274	NP_730532.1	373	CG5274, isoform B
3L	NT_037436.4	20428353	20430363	-	40258	CG5262	Dmel_CG5262	NP_649223.1	509	CG5262, isoform A
3L	NT_037436.4	20428353	20430363	-	40258	CG5262	Dmel_CG5262	NP_001262109.1	509	CG5262, isoform B
3L	NT_037436.4	20430743	20432260	-	40259	Las	Dmel_CG5231	NP_524183.2	377	lipoic acid synthase
3L	NT_037436.4	20432842	20435049	+	40260	Psn	Dmel_CG18803	NP_001262110.1	527	presenilin, isoform D
3L	NT_037436.4	20432842	20435049	+	40260	Psn	Dmel_CG18803	NP_001262111.1	541	presenilin, isoform E
3L	NT_037436.4	20432842	20435049	+	40260	Psn	Dmel_CG18803	NP_001137988.1	508	presenilin, isoform C
3L	NT_037436.4	20432842	20435049	+	40260	Psn	Dmel_CG18803	NP_524184.1	541	presenilin, isoform A
3L	NT_037436.4	20432842	20435049	+	40260	Psn	Dmel_CG18803	NP_730535.1	527	presenilin, isoform B
3L	NT_037436.4	20435159	20436090	-	40261	mRpL15	Dmel_CG5219	NP_524185.1	286	mitochondrial ribosomal protein L15
3L	NT_037436.4	20436382	20437310	+	40262	CG5872	Dmel_CG5872	NP_001287129.1	245	CG5872, isoform B
3L	NT_037436.4	20436382	20438125	+	40262	CG5872	Dmel_CG5872	NP_649224.1	493	CG5872, isoform A
3L	NT_037436.4	20438226	20439774	-	40263	CG11796	Dmel_CG11796	NP_730536.1	380	uncharacterized protein Dmel_CG11796, isoform A
3L	NT_037436.4	20438226	20439232	-	40263	CG11796	Dmel_CG11796	NP_649225.1	294	uncharacterized protein Dmel_CG11796, isoform B
3L	NT_037436.4	20446020	20450396	+	40264	CG5910	Dmel_CG5910	NP_001163482.1	251	CG5910, isoform B
3L	NT_037436.4	20446020	20450396	+	40264	CG5910	Dmel_CG5910	NP_649226.1	251	CG5910, isoform A
3L	NT_037436.4	20450810	20452575	-	40265	CG5199	Dmel_CG5199	NP_649227.2	382	CG5199, isoform A
3L	NT_037436.4	20450810	20452575	-	40265	CG5199	Dmel_CG5199	NP_001262112.1	382	CG5199, isoform B
3L	NT_037436.4	20454773	20459556	-	40266	atk	Dmel_CG5195	NP_649228.1	1535	artichoke, isoform A
3L	NT_037436.4	20454773	20459556	-	40266	atk	Dmel_CG5195	NP_001262114.1	1535	artichoke, isoform C
3L	NT_037436.4	20454773	20459556	-	40266	atk	Dmel_CG5195	NP_001262113.1	1535	artichoke, isoform B
3L	NT_037436.4	20460704	20462018	+	40267	mag	Dmel_CG5932	NP_649229.1	399	magro
3L	NT_037436.4	20464759	20465653	-	10178963	CG42764	Dmel_CG42764	NP_001189140.1	232	uncharacterized protein Dmel_CG42764, isoform A
3L	NT_037436.4	20464759	20465904	-	10178963	CG42764	Dmel_CG42764	NP_001189141.1	229	uncharacterized protein Dmel_CG42764, isoform B
3L	NT_037436.4	20465406	20465653	-	10178963	CG42764	Dmel_CG42764	NP_001262115.1	55	uncharacterized protein Dmel_CG42764, isoform C
3L	NT_037436.4	20467012	20469450	+	40268	CG5955	Dmel_CG5955	NP_649230.1	367	CG5955
3L	NT_037436.4	20469797	20472974	-	50105	CG32428	Dmel_CG32428	NP_001189142.1	238	uncharacterized protein Dmel_CG32428, isoform C
3L	NT_037436.4	20470895	20472974	-	50105	CG32428	Dmel_CG32428	NP_001163483.1	195	uncharacterized protein Dmel_CG32428, isoform B
3L	NT_037436.4	20470895	20472974	-	50105	CG32428	Dmel_CG32428	NP_652279.1	195	uncharacterized protein Dmel_CG32428, isoform A
3L	NT_037436.4	20473898	20474277	+	40269	CG5969	Dmel_CG5969	NP_788549.1	105	CG5969
3L	NT_037436.4	20474527	20476512	+	40270	isoQC	Dmel_CG5976	NP_788550.1	354	iso glutaminyl cyclase, isoform B
3L	NT_037436.4	20475387	20476512	+	40270	isoQC	Dmel_CG5976	NP_788551.1	352	iso glutaminyl cyclase, isoform A
3L	NT_037436.4	20484775	20488318	-	40271	ZnT77C	Dmel_CG5130	NP_649233.2	513	zinc transporter 77C, isoform A
3L	NT_037436.4	20484775	20488318	-	40271	ZnT77C	Dmel_CG5130	NP_730541.1	513	zinc transporter 77C, isoform B
3L	NT_037436.4	20495480	20496985	+	40272	ND-39	Dmel_CG6020	NP_649234.1	416	NADH dehydrogenase (ubiquinone) 39 kDa subunit, isoform A
3L	NT_037436.4	20495480	20496985	+	40272	ND-39	Dmel_CG6020	NP_001262116.1	416	NADH dehydrogenase (ubiquinone) 39 kDa subunit, isoform B
3L	NT_037436.4	20497636	20510793	+	40273	CG32425	Dmel_CG32425	NP_001097649.1	530	uncharacterized protein Dmel_CG32425, isoform F
3L	NT_037436.4	20499872	20501500	+	40274	CG18281	Dmel_CG18281	NP_649236.1	542	uncharacterized protein Dmel_CG18281
3L	NT_037436.4	20504186	20505700	+	40275	CG17637	Dmel_CG17637	NP_649237.1	504	uncharacterized protein Dmel_CG17637
3L	NT_037436.4	20506032	20507375	+	40276	CG5078	Dmel_CG5078	NP_649238.3	447	CG5078
3L	NT_037436.4	20510053	20513686	+	40273	CG32425	Dmel_CG32425	NP_730546.1	759	uncharacterized protein Dmel_CG32425, isoform A
3L	NT_037436.4	20510053	20513686	+	40273	CG32425	Dmel_CG32425	NP_730547.1	759	uncharacterized protein Dmel_CG32425, isoform E
3L	NT_037436.4	20510053	20510793	+	40273	CG32425	Dmel_CG32425	NP_730548.1	246	uncharacterized protein Dmel_CG32425, isoform B
3L	NT_037436.4	20512047	20513686	+	40273	CG32425	Dmel_CG32425	NP_730549.1	480	uncharacterized protein Dmel_CG32425, isoform C
3L	NT_037436.4	20515332	20517276	-	40278	CG5059	Dmel_CG5059	NP_730551.1	193	CG5059, isoform B
3L	NT_037436.4	20515332	20516100	-	40278	CG5059	Dmel_CG5059	NP_996125.1	177	CG5059, isoform D
3L	NT_037436.4	20515332	20519007	-	40278	CG5059	Dmel_CG5059	NP_649239.1	201	CG5059, isoform A
3L	NT_037436.4	20515332	20516100	-	40278	CG5059	Dmel_CG5059	NP_730552.1	177	CG5059, isoform C
3L	NT_037436.4	20515332	20516100	-	40278	CG5059	Dmel_CG5059	NP_001262117.1	177	CG5059, isoform E
3L	NT_037436.4	20519617	20520740	-	40279	mTerf3	Dmel_CG5047	NP_649240.1	354	mitochondrial transcription termination factor 3
3L	NT_037436.4	20521156	20522286	+	40280	CG5104	Dmel_CG5104	NP_649241.1	163	CG5104
3L	NT_037436.4	20522644	20525826	-	40281	CG4825	Dmel_CG4825	NP_649242.1	498	CG4825, isoform A
3L	NT_037436.4	20522644	20525826	-	40281	CG4825	Dmel_CG4825	NP_001262118.1	497	CG4825, isoform B
3L	NT_037436.4	20526654	20527821	+	40282	CG4858	Dmel_CG4858	NP_649243.1	260	CG4858
3L	NT_037436.4	20528449	20538949	-	40283	Rcd2	Dmel_CG4786	NP_649244.3	452	reduction in Cnn dots 2
3L	NT_037436.4	20533709	20535335	+	40284	CG13250	Dmel_CG13250	NP_649245.1	192	uncharacterized protein Dmel_CG13250, isoform A
3L	NT_037436.4	20534285	20535335	+	40284	CG13250	Dmel_CG13250	NP_001262119.1	135	uncharacterized protein Dmel_CG13250, isoform B
3L	NT_037436.4	20598142	20617414	-	40285	knrl	Dmel_CG4761	NP_001303368.1	647	knirps-like, isoform B
3L	NT_037436.4	20598142	20617414	-	40285	knrl	Dmel_CG4761	NP_788552.1	647	knirps-like, isoform A
3L	NT_037436.4	20637230	20640795	+	40286	CG13251	Dmel_CG13251	NP_649246.1	1088	uncharacterized protein Dmel_CG13251
3L	NT_037436.4	20692836	20694456	-	40287	kni	Dmel_CG4717	NP_001287130.1	434	knirps, isoform B
3L	NT_037436.4	20692836	20694340	-	40287	kni	Dmel_CG4717	NP_524187.1	429	knirps, isoform A
3L	NT_037436.4	20713282	20717145	-	40288	cmpy	Dmel_CG13253	NP_001097652.1	273	crimpy, isoform C
3L	NT_037436.4	20713282	20717145	-	40288	cmpy	Dmel_CG13253	NP_001246849.1	273	crimpy, isoform D
3L	NT_037436.4	20714100	20715152	+	5740551	CG34260	Dmel_CG34260	NP_001262120.1	178	uncharacterized protein Dmel_CG34260
3L	NT_037436.4	20716795	20717145	-	40288	cmpy	Dmel_CG13253	NP_001097651.1	116	crimpy, isoform B
3L	NT_037436.4	20737386	20743658	+	40289	CG13252	Dmel_CG13252	NP_649248.3	384	uncharacterized protein Dmel_CG13252
3L	NT_037436.4	20737615	20739430	-	117476	Gr77a	Dmel_CG32433	NP_730560.1	449	gustatory receptor 77a
3L	NT_037436.4	20754976	20755685	-	3772438	CG33912	Dmel_CG33912	NP_001027139.1	165	uncharacterized protein Dmel_CG33912
3L	NT_037436.4	20758916	20759095	+	12798428	CG43251	Dmel_CG43251	NP_001246850.1	39	uncharacterized protein Dmel_CG43251
3L	NT_037436.4	20768407	20769358	-	40290	CG4074	Dmel_CG4074	NP_001287131.1	295	CG4074, isoform B
3L	NT_037436.4	20768407	20769358	-	40290	CG4074	Dmel_CG4074	NP_649249.1	295	CG4074, isoform A
3L	NT_037436.4	20769641	20770007	+	50107	CG4186	Dmel_CG4186	NP_001287132.1	85	CG4186, isoform B
3L	NT_037436.4	20769641	20770007	+	50107	CG4186	Dmel_CG4186	NP_652281.1	85	CG4186, isoform A
3L	NT_037436.4	20770203	20771057	-	40291	CG4042	Dmel_CG4042	NP_649250.2	284	CG4042, isoform A
3L	NT_037436.4	20770203	20771057	-	40291	CG4042	Dmel_CG4042	NP_001262121.1	284	CG4042, isoform B
3L	NT_037436.4	20771800	20776707	+	40292	Pitslre	Dmel_CG4268	NP_649251.2	952	pitslre, isoform A
3L	NT_037436.4	20771800	20776707	+	40292	Pitslre	Dmel_CG4268	NP_730563.1	952	pitslre, isoform C
3L	NT_037436.4	20774251	20776707	+	40292	Pitslre	Dmel_CG4268	NP_001262122.1	778	pitslre, isoform G
3L	NT_037436.4	20774251	20776707	+	40292	Pitslre	Dmel_CG4268	NP_001246852.1	778	pitslre, isoform F
3L	NT_037436.4	20774251	20776707	+	40292	Pitslre	Dmel_CG4268	NP_001246851.1	778	pitslre, isoform E
3L	NT_037436.4	20777069	20778154	-	40293	Pex16	Dmel_CG3947	NP_649252.1	341	peroxin 16
3L	NT_037436.4	20778933	20780106	+	40294	Pex14	Dmel_CG4289	NP_649253.1	280	peroxin 14
3L	NT_037436.4	20781658	20784607	-	40295	CG11399	Dmel_CG11399	NP_649254.2	920	uncharacterized protein Dmel_CG11399
3L	NT_037436.4	20786451	20788102	-	40296	CG11396	Dmel_CG11396	NP_649255.1	484	uncharacterized protein Dmel_CG11396
3L	NT_037436.4	20789066	20792287	-	40297	Six4	Dmel_CG3871	NP_649256.1	392	Six4, isoform A
3L	NT_037436.4	20789066	20792287	-	40297	Six4	Dmel_CG3871	NP_730566.1	392	Six4, isoform B
3L	NT_037436.4	20797329	20798351	-	40298	CG3698	Dmel_CG3698	NP_649257.1	340	CG3698
3L	NT_037436.4	20798790	20799990	+	40299	tzn	Dmel_CG4365	NP_730568.1	348	tenzing norgay, isoform C
3L	NT_037436.4	20798790	20799990	+	40299	tzn	Dmel_CG4365	NP_649258.1	305	tenzing norgay, isoform A
3L	NT_037436.4	20799175	20799990	+	40299	tzn	Dmel_CG4365	NP_730569.1	271	tenzing norgay, isoform B
3L	NT_037436.4	20800479	20806671	+	40300	Spc105R	Dmel_CG11451	NP_001262123.1	1960	Spc105-related, isoform B
3L	NT_037436.4	20800543	20806671	+	40300	Spc105R	Dmel_CG11451	NP_649259.1	1959	Spc105-related, isoform A
3L	NT_037436.4	20807299	20808977	-	40301	CG3634	Dmel_CG3634	NP_001262124.1	537	CG3634, isoform B
3L	NT_037436.4	20807299	20808977	-	40301	CG3634	Dmel_CG3634	NP_649260.1	537	CG3634, isoform A
3L	NT_037436.4	20807299	20808977	-	40301	CG3634	Dmel_CG3634	NP_001262125.1	537	CG3634, isoform C
3L	NT_037436.4	20809803	20812878	+	40302	HIPP1	Dmel_CG3680	NP_001262128.1	923	HP1 and insulator partner protein 1, isoform D
3L	NT_037436.4	20809803	20812878	+	40302	HIPP1	Dmel_CG3680	NP_001262127.1	925	HP1 and insulator partner protein 1, isoform C
3L	NT_037436.4	20809803	20812878	+	40302	HIPP1	Dmel_CG3680	NP_649261.1	926	HP1 and insulator partner protein 1, isoform A
3L	NT_037436.4	20809803	20812878	+	40302	HIPP1	Dmel_CG3680	NP_001262126.1	924	HP1 and insulator partner protein 1, isoform B
3L	NT_037436.4	20813520	20815799	-	40303	CG3618	Dmel_CG3618	NP_649262.1	759	CG3618, isoform A
3L	NT_037436.4	20813520	20815799	-	40303	CG3618	Dmel_CG3618	NP_001189143.1	759	CG3618, isoform B
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014595.1	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform U
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_730574.2	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform P
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014596.1	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform T
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014593.1	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform L
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189149.1	377	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform AC
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014594.1	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform K
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_730573.2	376	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform M
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189148.1	377	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform AB
3L	NT_037436.4	20816660	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189147.1	377	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform AA
3L	NT_037436.4	20817169	20817878	-	40304	Mst77F	Dmel_CG3354	NP_524188.1	215	Male-specific transcript 77F
3L	NT_037436.4	20819035	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189150.1	464	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform V
3L	NT_037436.4	20819035	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_649263.2	463	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform O
3L	NT_037436.4	20820724	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014598.1	319	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform R
3L	NT_037436.4	20820724	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189146.1	320	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform Z
3L	NT_037436.4	20829532	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189144.1	322	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform W
3L	NT_037436.4	20829532	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_730576.1	321	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform Q
3L	NT_037436.4	20832912	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001189145.1	297	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform X
3L	NT_037436.4	20832912	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_524189.2	296	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform N
3L	NT_037436.4	20832912	20834086	+	40305	Pka-R1	Dmel_CG42341	NP_001014597.1	296	protein kinase, cAMP-dependent, regulatory subunit type 1, isoform S
3L	NT_037436.4	20836211	20836955	+	40307	CG3288	Dmel_CG3288	NP_001287133.1	226	CG3288, isoform B
3L	NT_037436.4	20836211	20836955	+	40307	CG3288	Dmel_CG3288	NP_649264.1	226	CG3288, isoform A
3L	NT_037436.4	20838382	20838585	+	50109	CG13255	Dmel_CG13255	NP_001262129.1	67	uncharacterized protein Dmel_CG13255, isoform B
3L	NT_037436.4	20838382	20838585	+	50109	CG13255	Dmel_CG13255	NP_652282.1	67	uncharacterized protein Dmel_CG13255, isoform A
3L	NT_037436.4	20839325	20841464	-	40308	CSN3	Dmel_CG18332	NP_524190.2	445	COP9 signalosome subunit 3
3L	NT_037436.4	20842051	20843555	+	40309	CG11456	Dmel_CG11456	NP_649265.1	445	uncharacterized protein Dmel_CG11456, isoform A
3L	NT_037436.4	20842051	20843084	+	40309	CG11456	Dmel_CG11456	NP_001163484.1	326	uncharacterized protein Dmel_CG11456, isoform B
3L	NT_037436.4	20842051	20843555	+	40309	CG11456	Dmel_CG11456	NP_001262130.1	445	uncharacterized protein Dmel_CG11456, isoform C
3L	NT_037436.4	20844519	20881633	-	40310	CG32432	Dmel_CG32432	NP_001262131.1	1297	uncharacterized protein Dmel_CG32432, isoform B
3L	NT_037436.4	20844519	20881633	-	40310	CG32432	Dmel_CG32432	NP_649266.1	1307	uncharacterized protein Dmel_CG32432, isoform A
3L	NT_037436.4	20897093	20897398	-	8674043	Sfp77F	Dmel_CG42482	NP_001163485.1	82	seminal fluid protein 77F, isoform A
3L	NT_037436.4	20897093	20897398	-	8674043	Sfp77F	Dmel_CG42482	NP_001287134.1	82	seminal fluid protein 77F, isoform B
3L	NT_037436.4	20897718	20898014	+	14462897	CG43931	Dmel_CG43931	NP_001262132.1	98	uncharacterized protein Dmel_CG43931
3L	NT_037436.4	20905845	20906141	+	50110	CG11458	Dmel_CG11458	NP_652283.1	98	uncharacterized protein Dmel_CG11458
3L	NT_037436.4	20926400	20949301	-	40314	fng	Dmel_CG10580	NP_524191.1	412	fringe
3L	NT_037436.4	20927951	20929111	+	40313	CG10589	Dmel_CG10589	NP_649269.1	386	uncharacterized protein Dmel_CG10589
3L	NT_037436.4	20955789	20956729	-	40315	Sems	Dmel_CG10586	NP_649270.1	275	seminase
3L	NT_037436.4	20956981	20960157	+	40316	CG10588	Dmel_CG10588	NP_001287135.1	1058	uncharacterized protein Dmel_CG10588, isoform B
3L	NT_037436.4	20956981	20960157	+	40316	CG10588	Dmel_CG10588	NP_649271.1	1058	uncharacterized protein Dmel_CG10588, isoform A
3L	NT_037436.4	20960430	20961384	-	40317	CG11037	Dmel_CG11037	NP_649272.1	292	uncharacterized protein Dmel_CG11037
3L	NT_037436.4	20961562	20962545	-	40318	CG10587	Dmel_CG10587	NP_649273.1	276	uncharacterized protein Dmel_CG10587, isoform A
3L	NT_037436.4	20961562	20962545	-	40318	CG10587	Dmel_CG10587	NP_001137989.2	289	uncharacterized protein Dmel_CG10587, isoform C
3L	NT_037436.4	20961868	20962545	-	40318	CG10587	Dmel_CG10587	NP_001287136.1	225	uncharacterized protein Dmel_CG10587, isoform D
3L	NT_037436.4	20962857	20966714	-	40319	CG12983	Dmel_CG12983	NP_001137992.1	1104	uncharacterized protein Dmel_CG12983, isoform D
3L	NT_037436.4	20965618	20966714	-	40319	CG12983	Dmel_CG12983	NP_001137990.1	221	uncharacterized protein Dmel_CG12983, isoform B
3L	NT_037436.4	20965900	20966714	-	40319	CG12983	Dmel_CG12983	NP_001246853.1	179	uncharacterized protein Dmel_CG12983, isoform E
3L	NT_037436.4	20965974	20966714	-	40319	CG12983	Dmel_CG12983	NP_001262133.1	205	uncharacterized protein Dmel_CG12983, isoform F
3L	NT_037436.4	20966093	20966714	-	40319	CG12983	Dmel_CG12983	NP_001137991.1	187	uncharacterized protein Dmel_CG12983, isoform C
3L	NT_037436.4	20966858	20970627	-	2768986	CG33287	Dmel_CG33287	NP_001137993.1	1101	uncharacterized protein Dmel_CG33287
3L	NT_037436.4	20970876	20974659	-	2768984	CG33286	Dmel_CG33286	NP_001097653.1	1062	uncharacterized protein Dmel_CG33286
3L	NT_037436.4	20991716	20992737	+	40321	CG12984	Dmel_CG12984	NP_649276.2	195	uncharacterized protein Dmel_CG12984, isoform A
3L	NT_037436.4	20992639	20992737	+	40321	CG12984	Dmel_CG12984	NP_001287137.1	32	uncharacterized protein Dmel_CG12984, isoform B
3L	NT_037436.4	20995704	21025020	-	43906	skd	Dmel_CG9936	NP_524653.1	2618	skuld, isoform D
3L	NT_037436.4	20995704	21025020	-	43906	skd	Dmel_CG9936	NP_001262134.1	2601	skuld, isoform F
3L	NT_037436.4	20995704	21025020	-	43906	skd	Dmel_CG9936	NP_730591.2	2768	skuld, isoform E
3L	NT_037436.4	20995704	21025020	-	43906	skd	Dmel_CG9936	NP_730590.1	2618	skuld, isoform C
3L	NT_037436.4	21028308	21029891	+	40323	CG10585	Dmel_CG10585	NP_001287138.1	448	uncharacterized protein Dmel_CG10585, isoform B
3L	NT_037436.4	21028308	21029891	+	40323	CG10585	Dmel_CG10585	NP_649277.1	448	uncharacterized protein Dmel_CG10585, isoform A
3L	NT_037436.4	21030425	21031249	-	40324	CG10584	Dmel_CG10584	NP_649278.1	274	uncharacterized protein Dmel_CG10584
3L	NT_037436.4	21031889	21033472	+	40325	Sin	Dmel_CG10582	NP_524192.2	486	Sex-lethal interactor, isoform A
3L	NT_037436.4	21031951	21033472	+	40325	Sin	Dmel_CG10582	NP_001163486.2	485	Sex-lethal interactor, isoform C
3L	NT_037436.4	21033560	21034192	-	40326	CG10581	Dmel_CG10581	NP_649279.2	189	uncharacterized protein Dmel_CG10581
3L	NT_037436.4	21034919	21074676	+	40327	siz	Dmel_CG32434	NP_730594.1	1325	schizo, isoform B
3L	NT_037436.4	21048726	21074676	+	40327	siz	Dmel_CG32434	NP_001163487.1	1220	schizo, isoform D
3L	NT_037436.4	21064355	21074676	+	40327	siz	Dmel_CG32434	NP_996129.1	1313	schizo, isoform A
3L	NT_037436.4	21065938	21066186	+	12798436	CG43072	Dmel_CG43072	NP_001246854.1	82	uncharacterized protein Dmel_CG43072
3L	NT_037436.4	21068141	21074676	+	40327	siz	Dmel_CG32434	NP_001036618.1	1210	schizo, isoform C
3L	NT_037436.4	21076188	21099595	-	40330	ko	Dmel_CG10573	NP_524193.2	1049	knockout, isoform A
3L	NT_037436.4	21076188	21099595	-	40330	ko	Dmel_CG10573	NP_001262135.1	1049	knockout, isoform B
3L	NT_037436.4	21088263	21088934	-	2768988	CG33285	Dmel_CG33285	NP_996130.1	223	uncharacterized protein Dmel_CG33285
3L	NT_037436.4	21122273	21122524	+	14462900	CG43938	Dmel_CG43938	NP_001262136.1	83	uncharacterized protein Dmel_CG43938
3L	NT_037436.4	21124315	21124662	+	2768989	CG33284	Dmel_CG33284	NP_996131.1	115	uncharacterized protein Dmel_CG33284
3L	NT_037436.4	21131797	21133162	+	40331	ICA69	Dmel_CG10566	NP_001246855.1	411	ICA69, isoform B
3L	NT_037436.4	21131797	21133162	+	40331	ICA69	Dmel_CG10566	NP_649283.1	411	ICA69, isoform A
3L	NT_037436.4	21133371	21135877	-	40332	CG10565	Dmel_CG10565	NP_649284.1	646	uncharacterized protein Dmel_CG10565, isoform A
3L	NT_037436.4	21133371	21135877	-	40332	CG10565	Dmel_CG10565	NP_001246856.1	646	uncharacterized protein Dmel_CG10565, isoform B
3L	NT_037436.4	21137080	21160681	-	40333	Ac78C	Dmel_CG10564	NP_001262138.1	1727	adenylyl cyclase 78C, isoform E
3L	NT_037436.4	21137107	21160681	-	40333	Ac78C	Dmel_CG10564	NP_001262139.1	1717	adenylyl cyclase 78C, isoform F
3L	NT_037436.4	21137107	21160681	-	40333	Ac78C	Dmel_CG10564	NP_524194.3	1718	adenylyl cyclase 78C, isoform B
3L	NT_037436.4	21137107	21147905	-	40333	Ac78C	Dmel_CG10564	NP_001262137.1	1694	adenylyl cyclase 78C, isoform D
3L	NT_037436.4	21137107	21145843	-	40333	Ac78C	Dmel_CG10564	NP_001246857.1	1222	adenylyl cyclase 78C, isoform C
3L	NT_037436.4	21173200	21174876	+	2768965	AsnS	Dmel_CG33486	NP_996132.1	558	asparagine synthetase
3L	NT_037436.4	21178133	21182608	+	43901	chb	Dmel_CG32435	NP_730597.1	1491	chromosome bows, isoform C
3L	NT_037436.4	21178133	21182608	+	43901	chb	Dmel_CG32435	NP_524651.2	1491	chromosome bows, isoform A
3L	NT_037436.4	21178133	21182608	+	43901	chb	Dmel_CG32435	NP_730596.1	1491	chromosome bows, isoform B
3L	NT_037436.4	21184662	21189705	-	40335	CG42337	Dmel_CG42337	NP_649286.2	610	uncharacterized protein Dmel_CG42337, isoform B
3L	NT_037436.4	21184662	21189705	-	40335	CG42337	Dmel_CG42337	NP_001246858.1	610	uncharacterized protein Dmel_CG42337, isoform C
3L	NT_037436.4	21194847	21196702	-	40336	park	Dmel_CG10523	NP_730601.1	482	parkin, isoform C
3L	NT_037436.4	21194847	21196702	-	40336	park	Dmel_CG10523	NP_730600.1	482	parkin, isoform B
3L	NT_037436.4	21196896	21197454	+	5740205	CG34261	Dmel_CG34261	NP_001097656.1	148	uncharacterized protein Dmel_CG34261
3L	NT_037436.4	21197460	21198125	-	40340	CG33054	Dmel_CG33054	NP_788553.1	161	uncharacterized protein Dmel_CG33054, isoform B
3L	NT_037436.4	21197482	21198065	-	40340	CG33054	Dmel_CG33054	NP_788554.1	153	uncharacterized protein Dmel_CG33054, isoform A
3L	NT_037436.4	21198459	21200294	-	326246	CG33056	Dmel_CG33056	NP_788557.1	343	uncharacterized protein Dmel_CG33056, isoform B
3L	NT_037436.4	21198459	21200294	-	326246	CG33056	Dmel_CG33056	NP_788555.1	320	uncharacterized protein Dmel_CG33056, isoform C
3L	NT_037436.4	21198459	21200294	-	326246	CG33056	Dmel_CG33056	NP_788556.1	343	uncharacterized protein Dmel_CG33056, isoform A
3L	NT_037436.4	21198459	21200294	-	326246	CG33056	Dmel_CG33056	NP_788559.1	343	uncharacterized protein Dmel_CG33056, isoform E
3L	NT_037436.4	21198459	21200294	-	326246	CG33056	Dmel_CG33056	NP_788558.1	343	uncharacterized protein Dmel_CG33056, isoform D
3L	NT_037436.4	21203091	21207594	+	40339	CG10512	Dmel_CG10512	NP_649289.2	446	uncharacterized protein Dmel_CG10512, isoform A
3L	NT_037436.4	21205472	21207594	+	40339	CG10512	Dmel_CG10512	NP_730605.1	381	uncharacterized protein Dmel_CG10512, isoform B
3L	NT_037436.4	21205700	21207594	+	40339	CG10512	Dmel_CG10512	NP_996133.1	361	uncharacterized protein Dmel_CG10512, isoform D
3L	NT_037436.4	21205700	21207594	+	40339	CG10512	Dmel_CG10512	NP_730606.1	361	uncharacterized protein Dmel_CG10512, isoform C
3L	NT_037436.4	21208218	21209994	-	40341	CG10510	Dmel_CG10510	NP_649291.2	523	uncharacterized protein Dmel_CG10510
3L	NT_037436.4	21210731	21215783	+	40342	CG10508	Dmel_CG10508	NP_001246859.1	733	uncharacterized protein Dmel_CG10508, isoform K
3L	NT_037436.4	21210731	21215783	+	40342	CG10508	Dmel_CG10508	NP_788560.3	445	uncharacterized protein Dmel_CG10508, isoform L
3L	NT_037436.4	21210731	21215783	+	40342	CG10508	Dmel_CG10508	NP_996134.2	732	uncharacterized protein Dmel_CG10508, isoform J
3L	NT_037436.4	21213848	21215125	+	40342	CG10508	Dmel_CG10508	NP_788562.3	329	uncharacterized protein Dmel_CG10508, isoform I
3L	NT_037436.4	21216129	21216721	-	40343	CG12975	Dmel_CG12975	NP_649293.1	124	uncharacterized protein Dmel_CG12975
3L	NT_037436.4	21217064	21217156	+	53573	Ilk	Dmel_CG10504	NP_001246860.1	30	integrin linked kinase, isoform B
3L	NT_037436.4	21217064	21218944	+	53573	Ilk	Dmel_CG10504	NP_525001.2	448	integrin linked kinase, isoform A
3L	NT_037436.4	21220768	21223118	+	12798437	CG43219	Dmel_CG43219	NP_001246861.1	98	uncharacterized protein Dmel_CG43219
3L	NT_037436.4	21227473	21264423	+	40345	Eip78C	Dmel_CG18023	NP_524195.2	862	Ecdysone-induced protein 78C, isoform A
3L	NT_037436.4	21227473	21264423	+	40345	Eip78C	Dmel_CG18023	NP_001246863.1	862	Ecdysone-induced protein 78C, isoform E
3L	NT_037436.4	21227473	21264423	+	40345	Eip78C	Dmel_CG18023	NP_001246862.1	862	Ecdysone-induced protein 78C, isoform D
3L	NT_037436.4	21258049	21258654	+	12798438	CG43218	Dmel_CG43218	NP_001246864.1	182	uncharacterized protein Dmel_CG43218
3L	NT_037436.4	21263112	21264423	+	40345	Eip78C	Dmel_CG18023	NP_730609.3	392	Ecdysone-induced protein 78C, isoform B
3L	NT_037436.4	21266841	21267859	-	40346	CG9391	Dmel_CG9391	NP_730610.3	278	CG9391, isoform C
3L	NT_037436.4	21266841	21267859	-	40346	CG9391	Dmel_CG9391	NP_649294.1	278	CG9391, isoform A
3L	NT_037436.4	21268490	21270426	-	40347	CG9389	Dmel_CG9389	NP_649295.1	596	CG9389
3L	NT_037436.4	21271705	21273562	-	40348	AcCoAS	Dmel_CG9390	NP_524196.2	524	acetyl coenzyme A synthase, isoform B
3L	NT_037436.4	21271705	21279785	-	40348	AcCoAS	Dmel_CG9390	NP_730611.1	670	acetyl coenzyme A synthase, isoform A
3L	NT_037436.4	21271705	21279785	-	40348	AcCoAS	Dmel_CG9390	NP_001014599.2	670	acetyl coenzyme A synthase, isoform D
3L	NT_037436.4	21280689	21281302	-	40349	ppl	Dmel_CG7758	NP_524197.1	165	pumpless
3L	NT_037436.4	21282203	21284452	-	40350	CG12974	Dmel_CG12974	NP_001262142.1	330	uncharacterized protein Dmel_CG12974, isoform C
3L	NT_037436.4	21282203	21285135	-	40350	CG12974	Dmel_CG12974	NP_730613.2	363	uncharacterized protein Dmel_CG12974, isoform B
3L	NT_037436.4	21282203	21284452	-	40350	CG12974	Dmel_CG12974	NP_649296.1	330	uncharacterized protein Dmel_CG12974, isoform A
3L	NT_037436.4	21282203	21285135	-	40350	CG12974	Dmel_CG12974	NP_001287139.1	363	uncharacterized protein Dmel_CG12974, isoform D
3L	NT_037436.4	21286437	21289487	+	40351	pzg	Dmel_CG7752	NP_001262143.1	996	putzig, isoform B
3L	NT_037436.4	21286437	21289487	+	40351	pzg	Dmel_CG7752	NP_649297.1	996	putzig, isoform A
3L	NT_037436.4	21292219	21292667	-	40352	Cpr78Ca	Dmel_CG11310	NP_649298.2	127	cuticular protein 78Ca
3L	NT_037436.4	21295566	21296071	+	40353	Cpr78Cb	Dmel_CG7663	NP_649299.2	140	cuticular protein 78Cb, isoform A
3L	NT_037436.4	21295566	21296071	+	40353	Cpr78Cb	Dmel_CG7663	NP_001262144.1	140	cuticular protein 78Cb, isoform B
3L	NT_037436.4	21297285	21297727	-	40354	Edg78E	Dmel_CG7673	NP_524198.1	122	Ecdysone-dependent gene 78E, isoform A
3L	NT_037436.4	21297285	21297727	-	40354	Edg78E	Dmel_CG7673	NP_001287140.1	122	Ecdysone-dependent gene 78E, isoform B
3L	NT_037436.4	21298702	21299010	+	14462901	CG43702	Dmel_CG43702	NP_001262145.1	74	uncharacterized protein Dmel_CG43702, isoform A
3L	NT_037436.4	21298777	21299010	+	14462901	CG43702	Dmel_CG43702	NP_001262146.1	77	uncharacterized protein Dmel_CG43702, isoform B
3L	NT_037436.4	21300621	21301050	+	40355	Cpr78Cc	Dmel_CG7658	NP_649300.1	119	cuticular protein 78Cc
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_001262148.1	348	uncharacterized protein Dmel_CG11309, isoform D
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_730617.1	348	uncharacterized protein Dmel_CG11309, isoform B
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_001262147.1	348	uncharacterized protein Dmel_CG11309, isoform C
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_001287141.1	348	uncharacterized protein Dmel_CG11309, isoform F
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_001262149.1	348	uncharacterized protein Dmel_CG11309, isoform E
3L	NT_037436.4	21302605	21304011	-	40356	CG11309	Dmel_CG11309	NP_649301.1	358	uncharacterized protein Dmel_CG11309, isoform A
3L	NT_037436.4	21304921	21305972	+	40357	CG7632	Dmel_CG7632	NP_001262150.1	312	CG7632, isoform B
3L	NT_037436.4	21304921	21305972	+	40357	CG7632	Dmel_CG7632	NP_649302.1	330	CG7632, isoform A
3L	NT_037436.4	21316424	21317910	-	40358	Pc	Dmel_CG32443	NP_524199.1	390	polycomb
3L	NT_037436.4	21319945	21334010	+	40359	Rab26	Dmel_CG34410	NP_001287142.1	388	Rab26, isoform G
3L	NT_037436.4	21319945	21334010	+	40359	Rab26	Dmel_CG34410	NP_649303.2	388	Rab26, isoform B
3L	NT_037436.4	21327628	21334010	+	40359	Rab26	Dmel_CG34410	NP_001163488.1	410	Rab26, isoform D
3L	NT_037436.4	21327628	21334010	+	40359	Rab26	Dmel_CG34410	NP_001097658.1	410	Rab26, isoform C
3L	NT_037436.4	21327628	21334010	+	40359	Rab26	Dmel_CG34410	NP_001262152.1	373	Rab26, isoform F
3L	NT_037436.4	21327628	21334010	+	40359	Rab26	Dmel_CG34410	NP_001262151.1	410	Rab26, isoform E
3L	NT_037436.4	21335323	21337941	+	40360	Tsr1	Dmel_CG7338	NP_649304.1	814	Tsr1 ribosome assembly factor
3L	NT_037436.4	21338353	21343619	-	40361	CG7324	Dmel_CG7324	NP_001262153.1	1256	CG7324, isoform B
3L	NT_037436.4	21338353	21343619	-	40361	CG7324	Dmel_CG7324	NP_649305.1	1291	CG7324, isoform A
3L	NT_037436.4	21344108	21354931	+	40362	CG32436	Dmel_CG32436	NP_730622.1	1737	uncharacterized protein Dmel_CG32436
3L	NT_037436.4	21345038	21346754	-	40363	ebd2	Dmel_CG12972	NP_649307.1	367	earthbound 2, isoform A
3L	NT_037436.4	21345038	21346754	-	40363	ebd2	Dmel_CG12972	NP_001246865.1	367	earthbound 2, isoform B
3L	NT_037436.4	21355277	21356142	-	40365	CG12971	Dmel_CG12971	NP_649309.2	226	uncharacterized protein Dmel_CG12971, isoform B
3L	NT_037436.4	21355277	21356495	-	40365	CG12971	Dmel_CG12971	NP_001262154.1	263	uncharacterized protein Dmel_CG12971, isoform C
3L	NT_037436.4	21357864	21359816	+	40366	CG32437	Dmel_CG32437	NP_730625.1	650	uncharacterized protein Dmel_CG32437
3L	NT_037436.4	21360364	21361039	+	318030	CG32440	Dmel_CG32440	NP_730626.1	85	uncharacterized protein Dmel_CG32440
3L	NT_037436.4	21405511	21406696	-	40367	sa	Dmel_CG11308	NP_649311.1	275	spermatocyte arrest
3L	NT_037436.4	21419746	21423269	+	40368	rgn	Dmel_CG6014	NP_001246866.1	808	regeneration, isoform B
3L	NT_037436.4	21419746	21423269	+	40368	rgn	Dmel_CG6014	NP_649312.1	800	regeneration, isoform A
3L	NT_037436.4	21419746	21423269	+	40368	rgn	Dmel_CG6014	NP_001262155.1	808	regeneration, isoform C
3L	NT_037436.4	21419746	21423269	+	40368	rgn	Dmel_CG6014	NP_001262156.1	800	regeneration, isoform D
3L	NT_037436.4	21420701	21425537	-	40369	barc	Dmel_CG6049	NP_649313.1	556	barricade, isoform A
3L	NT_037436.4	21420701	21425537	-	40369	barc	Dmel_CG6049	NP_730629.1	556	barricade, isoform C
3L	NT_037436.4	21428059	21432993	+	2768968	CG33288	Dmel_CG33288	NP_996136.2	1115	uncharacterized protein Dmel_CG33288
3L	NT_037436.4	21435220	21436647	+	40370	Aef1	Dmel_CG5683	NP_001262157.1	454	adult enhancer factor 1, isoform D
3L	NT_037436.4	21435220	21436209	+	40370	Aef1	Dmel_CG5683	NP_524200.1	308	adult enhancer factor 1, isoform B
3L	NT_037436.4	21435220	21436209	+	40370	Aef1	Dmel_CG5683	NP_730631.1	308	adult enhancer factor 1, isoform C
3L	NT_037436.4	21435220	21436209	+	40370	Aef1	Dmel_CG5683	NP_730630.1	308	adult enhancer factor 1, isoform A
3L	NT_037436.4	21438919	21441169	-	40371	CG5664	Dmel_CG5664	NP_649314.2	711	CG5664, isoform A
3L	NT_037436.4	21439732	21441169	-	40371	CG5664	Dmel_CG5664	NP_001262158.1	443	CG5664, isoform B
3L	NT_037436.4	21442371	21444750	-	40372	Alp1	Dmel_CG5656	NP_649315.1	523	alkaline phosphatase 1, isoform A
3L	NT_037436.4	21442371	21444750	-	40372	Alp1	Dmel_CG5656	NP_001262159.1	530	alkaline phosphatase 1, isoform B
3L	NT_037436.4	21446255	21447651	+	36173	Syx7	Dmel_CG5081	NP_730632.1	282	syntaxin 7, isoform A
3L	NT_037436.4	21446255	21447651	+	36173	Syx7	Dmel_CG5081	NP_730633.1	282	syntaxin 7, isoform B
3L	NT_037436.4	21474668	21476194	-	40374	croc	Dmel_CG5069	NP_524202.1	508	crocodile
3L	NT_037436.4	21484934	21490001	-	40375	Neu2	Dmel_CG7204	NP_001262160.1	308	Neuroectoderm-expressed 2, isoform B
3L	NT_037436.4	21488853	21490001	-	40375	Neu2	Dmel_CG7204	NP_649316.1	382	Neuroectoderm-expressed 2, isoform A
3L	NT_037436.4	21491448	21492706	-	40376	CG7202	Dmel_CG7202	NP_649317.1	289	CG7202
3L	NT_037436.4	21493185	21493782	+	40377	CG7519	Dmel_CG7519	NP_649318.1	160	CG7519, isoform A
3L	NT_037436.4	21493185	21493782	+	40377	CG7519	Dmel_CG7519	NP_001262161.1	151	CG7519, isoform B
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_730636.1	601	Hormone-receptor-like in 78, isoform B
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_730637.1	601	Hormone-receptor-like in 78, isoform C
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_524203.2	599	Hormone-receptor-like in 78, isoform A
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_001189151.1	601	Hormone-receptor-like in 78, isoform E
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_996137.1	601	Hormone-receptor-like in 78, isoform D
3L	NT_037436.4	21494306	21496859	-	40378	Hr78	Dmel_CG7199	NP_001189152.1	601	Hormone-receptor-like in 78, isoform F
3L	NT_037436.4	21498215	21507126	-	40382	Glg1	Dmel_CG33214	NP_001262163.1	1107	golgi complex-localized glycoprotein 1, isoform B
3L	NT_037436.4	21498215	21507126	-	40382	Glg1	Dmel_CG33214	NP_788563.1	1103	golgi complex-localized glycoprotein 1, isoform A
3L	NT_037436.4	21501465	21503856	+	40381	Est-Q	Dmel_CG7529	NP_649321.1	559	esterase Q
3L	NT_037436.4	21508264	21511708	+	40383	M6	Dmel_CG7540	NP_001287143.1	187	M6, isoform G
3L	NT_037436.4	21508264	21511947	+	40383	M6	Dmel_CG7540	NP_649323.2	319	M6, isoform C
3L	NT_037436.4	21508264	21511947	+	40383	M6	Dmel_CG7540	NP_001262164.1	248	M6, isoform D
3L	NT_037436.4	21508795	21511947	+	40383	M6	Dmel_CG7540	NP_001262166.1	368	M6, isoform F
3L	NT_037436.4	21508795	21511947	+	40383	M6	Dmel_CG7540	NP_001262165.1	297	M6, isoform E
3L	NT_037436.4	21510079	21511947	+	40383	M6	Dmel_CG7540	NP_730642.1	314	M6, isoform B
3L	NT_037436.4	21513066	21515751	-	40384	SAK	Dmel_CG7186	NP_649324.1	769	Sak kinase
3L	NT_037436.4	21517582	21521781	+	40385	Cdk12	Dmel_CG7597	NP_001262167.1	1157	Cyclin-dependent kinase 12, isoform C
3L	NT_037436.4	21517582	21521781	+	40385	Cdk12	Dmel_CG7597	NP_649325.2	1157	Cyclin-dependent kinase 12, isoform A
3L	NT_037436.4	21517582	21521781	+	40385	Cdk12	Dmel_CG7597	NP_730643.1	1157	Cyclin-dependent kinase 12, isoform B
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730644.1	630	CG7611, isoform B
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_001163489.1	630	CG7611, isoform I
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730647.1	630	CG7611, isoform E
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730646.1	630	CG7611, isoform D
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730648.1	630	CG7611, isoform J
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730649.1	630	CG7611, isoform G
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_649326.1	630	CG7611, isoform A
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730650.1	630	CG7611, isoform H
3L	NT_037436.4	21525258	21527664	+	40386	CG7611	Dmel_CG7611	NP_730645.1	630	CG7611, isoform C
3L	NT_037436.4	21528343	21529241	-	318031	Arv1	Dmel_CG32442	NP_730651.1	238	ACAT-related protein required for viability 1, isoform A
3L	NT_037436.4	21528690	21529241	-	318031	Arv1	Dmel_CG32442	NP_730652.1	125	ACAT-related protein required for viability 1, isoform B
3L	NT_037436.4	21528690	21529241	-	318031	Arv1	Dmel_CG32442	NP_001137995.1	121	ACAT-related protein required for viability 1, isoform C
3L	NT_037436.4	21531469	21533120	-	44131	Mkrn1	Dmel_CG7184	NP_524704.1	386	makorin 1, isoform A
3L	NT_037436.4	21531469	21533120	-	44131	Mkrn1	Dmel_CG7184	NP_001246867.1	386	makorin 1, isoform C
3L	NT_037436.4	21531469	21533120	-	44131	Mkrn1	Dmel_CG7184	NP_730653.1	386	makorin 1, isoform B
3L	NT_037436.4	21534660	21536164	+	2768987	ppk5	Dmel_CG33289	NP_001246869.1	405	pickpocket 5, isoform C
3L	NT_037436.4	21534660	21536861	+	2768987	ppk5	Dmel_CG33289	NP_996138.2	474	pickpocket 5, isoform B
3L	NT_037436.4	21537113	21538464	+	40388	Rpn10	Dmel_CG7619	NP_524204.1	396	regulatory particle non-ATPase 10, isoform A
3L	NT_037436.4	21537113	21538464	+	40388	Rpn10	Dmel_CG7619	NP_001262168.1	396	regulatory particle non-ATPase 10, isoform B
3L	NT_037436.4	21539072	21539354	-	40390	COX8	Dmel_CG7181	NP_649328.1	68	cytochrome c oxidase subunit 8, isoform A
3L	NT_037436.4	21539072	21539354	-	40390	COX8	Dmel_CG7181	NP_001262169.1	68	cytochrome c oxidase subunit 8, isoform B
3L	NT_037436.4	21539988	21540395	+	40389	VhaM9.7-b	Dmel_CG7625	NP_649327.2	89	vacuolar 
3L	NT_037436.4	21539988	21540395	+	40389	VhaM9.7-b	Dmel_CG7625	NP_001262170.1	89	vacuolar 
3L	NT_037436.4	21542429	21542944	+	2768993	CG33290	Dmel_CG33290	NP_996139.1	171	uncharacterized protein Dmel_CG33290
3L	NT_037436.4	21544138	21553118	-	40391	Wnk	Dmel_CG7177	NP_001262173.2	2243	Wnk kinase, isoform O
3L	NT_037436.4	21544138	21554143	-	40391	Wnk	Dmel_CG7177	NP_001262174.3	2441	Wnk kinase, isoform L
3L	NT_037436.4	21544138	21554143	-	40391	Wnk	Dmel_CG7177	NP_001262172.3	2441	Wnk kinase, isoform N
3L	NT_037436.4	21544138	21554143	-	40391	Wnk	Dmel_CG7177	NP_001262171.2	2462	Wnk kinase, isoform M
3L	NT_037436.4	21555651	21557760	-	40392	CG7173	Dmel_CG7173	NP_649330.1	564	CG7173
3L	NT_037436.4	21559181	21562000	-	40393	CapaR	Dmel_CG14575	NP_996140.1	477	capability receptor, isoform B
3L	NT_037436.4	21560335	21562000	-	40393	CapaR	Dmel_CG14575	NP_001262175.1	301	capability receptor, isoform C
3L	NT_037436.4	21565520	21567727	+	40394	CG7634	Dmel_CG7634	NP_649332.1	579	CG7634
3L	NT_037436.4	21568135	21568833	-	40395	CRIF	Dmel_CG7172	NP_649333.1	232	CR6-interacting factor
3L	NT_037436.4	21569379	21573463	+	326215	SMC5	Dmel_CG32438	NP_649334.3	992	structural maintenance of chromosomes 5, isoform H
3L	NT_037436.4	21569379	21573463	+	326215	SMC5	Dmel_CG32438	NP_996141.2	1034	structural maintenance of chromosomes 5, isoform E
3L	NT_037436.4	21569379	21573463	+	326215	SMC5	Dmel_CG32438	NP_001262176.1	1025	structural maintenance of chromosomes 5, isoform G
3L	NT_037436.4	21569379	21573463	+	326215	SMC5	Dmel_CG32438	NP_730660.3	1001	structural maintenance of chromosomes 5, isoform F
3L	NT_037436.4	21574255	21575741	+	40396	CG32441	Dmel_CG32441	NP_730661.2	214	uncharacterized protein Dmel_CG32441, isoform D
3L	NT_037436.4	21574627	21575741	+	40396	CG32441	Dmel_CG32441	NP_730662.2	227	uncharacterized protein Dmel_CG32441, isoform C
3L	NT_037436.4	21586858	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_001262177.1	459	transcription factor AP-2, isoform C
3L	NT_037436.4	21586858	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_001262180.1	465	transcription factor AP-2, isoform F
3L	NT_037436.4	21599282	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_001262178.1	471	transcription factor AP-2, isoform D
3L	NT_037436.4	21599282	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_649336.1	465	transcription factor AP-2, isoform B
3L	NT_037436.4	21608336	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_730664.1	461	transcription factor AP-2, isoform A
3L	NT_037436.4	21608336	21612954	+	40398	TfAP-2	Dmel_CG7807	NP_001262179.1	467	transcription factor AP-2, isoform E
3L	NT_037436.4	21613825	21617307	-	40399	S1P	Dmel_CG7169	NP_649337.2	1012	S1P
3L	NT_037436.4	21618368	21619819	+	40400	CG11307	Dmel_CG11307	NP_730667.3	404	uncharacterized protein Dmel_CG11307, isoform D
3L	NT_037436.4	21618368	21619819	+	40400	CG11307	Dmel_CG11307	NP_001163490.1	404	uncharacterized protein Dmel_CG11307, isoform C
3L	NT_037436.4	21621888	21625473	-	40401	CG7166	Dmel_CG7166	NP_001262181.1	467	CG7166, isoform C
3L	NT_037436.4	21621888	21625473	-	40401	CG7166	Dmel_CG7166	NP_649339.2	467	CG7166, isoform B
3L	NT_037436.4	21626359	21628274	+	40402	CG11306	Dmel_CG11306	NP_001262182.1	475	uncharacterized protein Dmel_CG11306, isoform B
3L	NT_037436.4	21626359	21628274	+	40402	CG11306	Dmel_CG11306	NP_649340.1	475	uncharacterized protein Dmel_CG11306, isoform A
3L	NT_037436.4	21628708	21634295	-	40403	MED1	Dmel_CG7162	NP_649341.1	1475	mediator complex subunit 1, isoform A
3L	NT_037436.4	21629705	21634295	-	40403	MED1	Dmel_CG7162	NP_001262183.1	1141	mediator complex subunit 1, isoform C
3L	NT_037436.4	21630912	21634295	-	40403	MED1	Dmel_CG7162	NP_001189153.1	1080	mediator complex subunit 1, isoform B
3L	NT_037436.4	21635385	21636122	+	40404	ORMDL	Dmel_CG14577	NP_730669.1	154	ORMDL
3L	NT_037436.4	21636986	21638932	+	40406	CG32444	Dmel_CG32444	NP_730670.1	370	uncharacterized protein Dmel_CG32444
3L	NT_037436.4	21639476	21640579	+	261603	CG32445	Dmel_CG32445	NP_730671.1	367	uncharacterized protein Dmel_CG32445
3L	NT_037436.4	21641190	21642161	+	326216	Atox1	Dmel_CG32446	NP_001262184.1	89	antioxidant 1 copper chaperone, isoform B
3L	NT_037436.4	21641190	21642107	+	326216	Atox1	Dmel_CG32446	NP_730672.1	71	antioxidant 1 copper chaperone, isoform A
3L	NT_037436.4	21652271	21666020	+	2768995	CG43980	Dmel_CG43980	NP_996142.1	1326	uncharacterized protein Dmel_CG43980, isoform B
3L	NT_037436.4	21658375	21666020	+	2768995	CG43980	Dmel_CG43980	NP_001262185.1	1549	uncharacterized protein Dmel_CG43980, isoform C
3L	NT_037436.4	21666477	21666956	-	40408	Cpr78E	Dmel_CG7160	NP_649345.1	137	cuticular protein 78E
3L	NT_037436.4	21672191	21674389	+	40409	CG11249	Dmel_CG11249	NP_649346.1	642	uncharacterized protein Dmel_CG11249
3L	NT_037436.4	21674739	21679498	-	40410	Als2	Dmel_CG7158	NP_649347.1	1486	amyotrophic lateral sclerosis 2
3L	NT_037436.4	21680307	21682916	+	40411	CG11248	Dmel_CG11248	NP_001262186.1	830	uncharacterized protein Dmel_CG11248, isoform C
3L	NT_037436.4	21680307	21682916	+	40411	CG11248	Dmel_CG11248	NP_649348.1	830	uncharacterized protein Dmel_CG11248, isoform A
3L	NT_037436.4	21680307	21682916	+	40411	CG11248	Dmel_CG11248	NP_730678.1	830	uncharacterized protein Dmel_CG11248, isoform B
3L	NT_037436.4	21683328	21683842	-	8674005	Sfp78E	Dmel_CG42607	NP_001262187.1	150	seminal fluid protein 78E, isoform B
3L	NT_037436.4	21683328	21683842	-	8674005	Sfp78E	Dmel_CG42607	NP_001163491.1	133	seminal fluid protein 78E, isoform A
3L	NT_037436.4	21693603	21706153	-	40412	CG32447	Dmel_CG32447	NP_730679.2	637	uncharacterized protein Dmel_CG32447, isoform C
3L	NT_037436.4	21693603	21706153	-	40412	CG32447	Dmel_CG32447	NP_001262188.1	574	uncharacterized protein Dmel_CG32447, isoform D
3L	NT_037436.4	21693603	21706153	-	40412	CG32447	Dmel_CG32447	NP_996144.1	658	uncharacterized protein Dmel_CG32447, isoform B
3L	NT_037436.4	21724899	21726738	-	40414	CG11247	Dmel_CG11247	NP_730680.1	522	uncharacterized protein Dmel_CG11247, isoform B
3L	NT_037436.4	21724899	21726738	-	40414	CG11247	Dmel_CG11247	NP_649351.2	522	uncharacterized protein Dmel_CG11247, isoform A
3L	NT_037436.4	21724899	21726738	-	40414	CG11247	Dmel_CG11247	NP_001097659.1	522	uncharacterized protein Dmel_CG11247, isoform C
3L	NT_037436.4	21724899	21725938	-	40414	CG11247	Dmel_CG11247	NP_001262189.1	326	uncharacterized protein Dmel_CG11247, isoform D
3L	NT_037436.4	21729193	21729642	+	40415	Rpb8	Dmel_CG11246	NP_649352.1	149	Rpb8
3L	NT_037436.4	21729742	21730428	-	40416	CG14570	Dmel_CG14570	NP_649353.1	228	uncharacterized protein Dmel_CG14570
3L	NT_037436.4	21730934	21731521	-	40417	CG14569	Dmel_CG14569	NP_649354.1	195	uncharacterized protein Dmel_CG14569
3L	NT_037436.4	21732937	21733452	-	40418	CG14568	Dmel_CG14568	NP_649355.1	171	uncharacterized protein Dmel_CG14568
3L	NT_037436.4	21734131	21734709	+	40419	CG14573	Dmel_CG14573	NP_649356.1	192	uncharacterized protein Dmel_CG14573
3L	NT_037436.4	21737762	21738334	-	40420	CG14567	Dmel_CG14567	NP_649357.1	190	uncharacterized protein Dmel_CG14567
3L	NT_037436.4	21739766	21740266	-	40421	CG14566	Dmel_CG14566	NP_001262190.1	166	uncharacterized protein Dmel_CG14566, isoform B
3L	NT_037436.4	21739766	21740266	-	40421	CG14566	Dmel_CG14566	NP_649358.1	166	uncharacterized protein Dmel_CG14566, isoform A
3L	NT_037436.4	21741577	21742350	+	40422	CG14572	Dmel_CG14572	NP_649359.1	257	uncharacterized protein Dmel_CG14572
3L	NT_037436.4	21743425	21744234	-	40423	CG14565	Dmel_CG14565	NP_649360.1	269	uncharacterized protein Dmel_CG14565
3L	NT_037436.4	21746533	21761199	-	40424	Syn1	Dmel_CG7152	NP_001262192.1	627	Syntrophin-like 1, isoform D
3L	NT_037436.4	21746533	21761199	-	40424	Syn1	Dmel_CG7152	NP_001262191.1	625	Syntrophin-like 1, isoform C
3L	NT_037436.4	21746533	21761199	-	40424	Syn1	Dmel_CG7152	NP_524205.2	627	Syntrophin-like 1, isoform B
3L	NT_037436.4	21746533	21761199	-	40424	Syn1	Dmel_CG7152	NP_730686.3	624	Syntrophin-like 1, isoform E
3L	NT_037436.4	21757157	21757981	+	40425	CG14564	Dmel_CG14564	NP_649361.1	274	uncharacterized protein Dmel_CG14564
3L	NT_037436.4	21770198	21770422	+	40427	CG7370	Dmel_CG7370	NP_649363.1	74	CG7370
3L	NT_037436.4	21813086	21813253	-	14462910	CG43895	Dmel_CG43895	NP_001262194.1	55	uncharacterized protein Dmel_CG43895
3L	NT_037436.4	21814779	21817321	+	40428	eg	Dmel_CG7383	NP_524206.1	373	eagle, isoform A
3L	NT_037436.4	21814779	21817321	+	40428	eg	Dmel_CG7383	NP_730689.1	373	eagle, isoform B
3L	NT_037436.4	21815520	21817321	+	40428	eg	Dmel_CG7383	NP_001262193.1	355	eagle, isoform C
3L	NT_037436.4	21822006	21823228	+	40429	CycH	Dmel_CG7405	NP_524207.1	324	cyclin H
3L	NT_037436.4	21823532	21824100	+	40430	CG7407	Dmel_CG7407	NP_649364.1	168	CG7407
3L	NT_037436.4	21825038	21827527	+	40431	CG7414	Dmel_CG7414	NP_649365.1	638	CG7414, isoform A
3L	NT_037436.4	21825038	21826937	+	40431	CG7414	Dmel_CG7414	NP_001189155.1	555	CG7414, isoform C
3L	NT_037436.4	21825038	21826937	+	40431	CG7414	Dmel_CG7414	NP_001189156.1	555	CG7414, isoform E
3L	NT_037436.4	21825038	21827527	+	40431	CG7414	Dmel_CG7414	NP_001137996.2	638	CG7414, isoform D
3L	NT_037436.4	21827846	21828169	-	318032	CG32448	Dmel_CG32448	NP_730691.2	85	uncharacterized protein Dmel_CG32448, isoform B
3L	NT_037436.4	21827846	21828169	-	318032	CG32448	Dmel_CG32448	NP_001189157.1	85	uncharacterized protein Dmel_CG32448, isoform C
3L	NT_037436.4	21830616	21832096	-	40432	CG7148	Dmel_CG7148	NP_649366.1	454	CG7148
3L	NT_037436.4	21832879	21835880	+	40433	Nopp140	Dmel_CG7421	NP_730694.2	720	Nopp140, isoform A
3L	NT_037436.4	21832879	21836135	+	40433	Nopp140	Dmel_CG7421	NP_001189158.2	685	Nopp140, isoform F
3L	NT_037436.4	21832879	21835880	+	40433	Nopp140	Dmel_CG7421	NP_001262195.1	773	Nopp140, isoform E
3L	NT_037436.4	21832879	21836135	+	40433	Nopp140	Dmel_CG7421	NP_730693.1	686	Nopp140, isoform B
3L	NT_037436.4	21837489	21839730	-	40434	P5CDh1	Dmel_CG7145	NP_001262196.1	574	delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform F
3L	NT_037436.4	21837489	21839730	-	40434	P5CDh1	Dmel_CG7145	NP_730698.1	574	delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform D
3L	NT_037436.4	21837489	21839730	-	40434	P5CDh1	Dmel_CG7145	NP_649368.2	574	delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform B
3L	NT_037436.4	21837489	21839730	-	40434	P5CDh1	Dmel_CG7145	NP_730695.1	574	delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform A
3L	NT_037436.4	21837489	21839730	-	40434	P5CDh1	Dmel_CG7145	NP_001189159.1	574	delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform E
3L	NT_037436.4	21841907	21842355	-	40435	CG14563	Dmel_CG14563	NP_649369.1	122	uncharacterized protein Dmel_CG14563
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_001246876.1	433	mushroom-body expressed, isoform H
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_001262197.1	359	mushroom-body expressed, isoform M
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_524208.1	386	mushroom-body expressed, isoform A
3L	NT_037436.4	21907822	21923188	+	40436	mub	Dmel_CG7437	NP_001246873.1	557	mushroom-body expressed, isoform F
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_730700.2	359	mushroom-body expressed, isoform G
3L	NT_037436.4	21907822	21923188	+	40436	mub	Dmel_CG7437	NP_001163493.1	557	mushroom-body expressed, isoform E
3L	NT_037436.4	21907822	21923188	+	40436	mub	Dmel_CG7437	NP_001036619.1	539	mushroom-body expressed, isoform D
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_001303375.1	415	mushroom-body expressed, isoform N
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_996145.1	364	mushroom-body expressed, isoform C
3L	NT_037436.4	21907822	21923188	+	40436	mub	Dmel_CG7437	NP_001246875.1	573	mushroom-body expressed, isoform K
3L	NT_037436.4	21907822	21925264	+	40436	mub	Dmel_CG7437	NP_001262198.1	368	mushroom-body expressed, isoform L
3L	NT_037436.4	21907822	21923188	+	40436	mub	Dmel_CG7437	NP_001246874.1	539	mushroom-body expressed, isoform I
3L	NT_037436.4	21934963	21938517	+	40437	SLC22A	Dmel_CG7442	NP_649370.1	568	SLC22A family member
3L	NT_037436.4	21939000	21941769	-	40438	DNApol-eta	Dmel_CG7143	NP_649371.2	885	DNApol-eta
3L	NT_037436.4	21943746	21949342	+	40439	CG14562	Dmel_CG14562	NP_001262199.1	1536	uncharacterized protein Dmel_CG14562, isoform B
3L	NT_037436.4	21943746	21949342	+	40439	CG14562	Dmel_CG14562	NP_649372.1	1536	uncharacterized protein Dmel_CG14562, isoform A
3L	NT_037436.4	21955302	21957786	+	40441	CG7458	Dmel_CG7458	NP_649374.1	572	CG7458
3L	NT_037436.4	21962431	21969667	+	40442	CS-2	Dmel_CG7464	NP_524209.3	1393	chitin synthase 2, isoform D
3L	NT_037436.4	21962431	21969667	+	40442	CS-2	Dmel_CG7464	NP_001137997.2	1392	chitin synthase 2, isoform C
3L	NT_037436.4	21972147	21982396	+	40443	CG7470	Dmel_CG7470	NP_001246877.1	776	CG7470, isoform B
3L	NT_037436.4	21972147	21982396	+	40443	CG7470	Dmel_CG7470	NP_649375.1	776	CG7470, isoform A
3L	NT_037436.4	21985351	21986843	+	40444	Act79B	Dmel_CG7478	NP_524210.1	376	actin 79B, isoform A
3L	NT_037436.4	21985351	21986843	+	40444	Act79B	Dmel_CG7478	NP_001262200.1	376	actin 79B, isoform B
3L	NT_037436.4	22026580	22028181	-	40445	CG7140	Dmel_CG7140	NP_649376.3	533	CG7140
3L	NT_037436.4	22029504	22029728	-	12798457	CG43392	Dmel_CG43392	NP_001246878.1	74	uncharacterized protein Dmel_CG43392
3L	NT_037436.4	22061081	22064074	+	42452	Oct-TyrR	Dmel_CG7485	NP_524419.2	601	Octopamine-Tyramine receptor, isoform A
3L	NT_037436.4	22061081	22064074	+	42452	Oct-TyrR	Dmel_CG7485	NP_001163494.1	601	Octopamine-Tyramine receptor, isoform B
3L	NT_037436.4	22066133	22066717	+	40447	CG14561	Dmel_CG14561	NP_649377.1	194	uncharacterized protein Dmel_CG14561, isoform A
3L	NT_037436.4	22066133	22066717	+	40447	CG14561	Dmel_CG14561	NP_001262201.1	194	uncharacterized protein Dmel_CG14561, isoform B
3L	NT_037436.4	22067775	22071526	-	40448	CG7139	Dmel_CG7139	NP_649378.1	969	CG7139
3L	NT_037436.4	22073275	22074336	-	40449	CG7133	Dmel_CG7133	NP_649379.1	353	CG7133
3L	NT_037436.4	22075248	22075634	-	40450	CG7130	Dmel_CG7130	NP_649380.1	128	CG7130
3L	NT_037436.4	22076288	22077315	+	40451	RpLP0	Dmel_CG7490	NP_524211.1	317	ribosomal protein LP0, isoform A
3L	NT_037436.4	22076288	22077315	+	40451	RpLP0	Dmel_CG7490	NP_001262202.1	317	ribosomal protein LP0, isoform B
3L	NT_037436.4	22080339	22080446	+	8674014	Sfp79B	Dmel_CG42483	NP_001163495.1	35	seminal fluid protein 79
3L	NT_037436.4	22082833	22083084	+	45962	msopa	Dmel_CG14560	NP_001262203.1	83	male-specific opa containing gene, isoform B
3L	NT_037436.4	22082833	22083084	+	45962	msopa	Dmel_CG14560	NP_524859.2	83	male-specific opa containing gene, isoform A
3L	NT_037436.4	22184093	22242659	+	40453	olf413	Dmel_CG12673	NP_730711.3	760	olf413, isoform B
3L	NT_037436.4	22184093	22242659	+	40453	olf413	Dmel_CG12673	NP_001262204.1	760	olf413, isoform C
3L	NT_037436.4	22258139	22262678	-	40456	Rich	Dmel_CG9063	NP_649385.1	1429	RIC1 homolog, isoform A
3L	NT_037436.4	22258139	22262678	-	40456	Rich	Dmel_CG9063	NP_001262205.1	1429	RIC1 homolog, isoform B
3L	NT_037436.4	22263483	22265845	+	40457	Ddx1	Dmel_CG9054	NP_524212.2	727	Dead-box-1
3L	NT_037436.4	22266078	22266554	-	40458	CG11523	Dmel_CG11523	NP_649386.1	158	uncharacterized protein Dmel_CG11523
3L	NT_037436.4	22267753	22271770	+	40459	Csp	Dmel_CG6395	NP_001262206.1	244	cysteine string protein, isoform D
3L	NT_037436.4	22267753	22272391	+	40459	Csp	Dmel_CG6395	NP_730713.1	249	cysteine string protein, isoform B
3L	NT_037436.4	22267753	22271770	+	40459	Csp	Dmel_CG6395	NP_001262207.1	244	cysteine string protein, isoform E
3L	NT_037436.4	22267753	22272391	+	40459	Csp	Dmel_CG6395	NP_730714.2	228	cysteine string protein, isoform C
3L	NT_037436.4	22267753	22271770	+	40459	Csp	Dmel_CG6395	NP_524213.1	223	cysteine string protein, isoform A
3L	NT_037436.4	22267753	22272391	+	40459	Csp	Dmel_CG6395	NP_001287144.1	249	cysteine string protein, isoform F
3L	NT_037436.4	22274558	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001246881.1	1018	Serine-arginine protein kinase at 79D, isoform K
3L	NT_037436.4	22274558	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001189161.1	869	Serine-arginine protein kinase at 79D, isoform F
3L	NT_037436.4	22274558	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001246880.1	965	Serine-arginine protein kinase at 79D, isoform J
3L	NT_037436.4	22274558	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001097660.2	816	Serine-arginine protein kinase at 79D, isoform H
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001262210.1	749	Serine-arginine protein kinase at 79D, isoform O
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001246879.1	898	Serine-arginine protein kinase at 79D, isoform I
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001189160.1	802	Serine-arginine protein kinase at 79D, isoform E
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001246882.1	951	Serine-arginine protein kinase at 79D, isoform L
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_649387.2	749	Serine-arginine protein kinase at 79D, isoform B
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001262209.1	802	Serine-arginine protein kinase at 79D, isoform N
3L	NT_037436.4	22278052	22283100	+	40461	Srpk79D	Dmel_CG11489	NP_001262208.1	950	Serine-arginine protein kinase at 79D, isoform M
3L	NT_037436.4	22284542	22287987	-	40462	Hem	Dmel_CG5837	NP_524214.1	1126	HEM-protein
3L	NT_037436.4	22288797	22292733	+	45785	IleRS	Dmel_CG11471	NP_730716.1	1229	Isoleucyl-tRNA synthetase, isoform A
3L	NT_037436.4	22288797	22292733	+	45785	IleRS	Dmel_CG11471	NP_788565.1	1229	Isoleucyl-tRNA synthetase, isoform D
3L	NT_037436.4	22288797	22292733	+	45785	IleRS	Dmel_CG11471	NP_524840.2	1229	Isoleucyl-tRNA synthetase, isoform C
3L	NT_037436.4	22295432	22407192	-	40464	Ten-m	Dmel_CG5723	NP_001262211.1	3349	tenascin major, isoform E
3L	NT_037436.4	22295588	22407192	-	40464	Ten-m	Dmel_CG5723	NP_524215.2	2731	tenascin major, isoform B
3L	NT_037436.4	22295588	22407192	-	40464	Ten-m	Dmel_CG5723	NP_001097661.2	3297	tenascin major, isoform D
3L	NT_037436.4	22329894	22330429	+	318034	CG32450	Dmel_CG32450	NP_730717.1	158	uncharacterized protein Dmel_CG32450
3L	NT_037436.4	22454373	22455989	+	40467	CG11449	Dmel_CG11449	NP_649390.1	538	uncharacterized protein Dmel_CG11449
3L	NT_037436.4	22459554	22460558	-	40468	laza	Dmel_CG11440	NP_649391.1	334	lazaro
3L	NT_037436.4	22466910	22467935	+	40469	CG11438	Dmel_CG11438	NP_001287145.1	341	uncharacterized protein Dmel_CG11438, isoform B
3L	NT_037436.4	22466910	22467935	+	40469	CG11438	Dmel_CG11438	NP_649392.1	341	uncharacterized protein Dmel_CG11438, isoform A
3L	NT_037436.4	22468873	22469790	+	40470	CG11437	Dmel_CG11437	NP_649393.1	305	uncharacterized protein Dmel_CG11437
3L	NT_037436.4	22472218	22473240	+	40471	CG11426	Dmel_CG11426	NP_649394.1	340	uncharacterized protein Dmel_CG11426
3L	NT_037436.4	22474833	22475750	+	40472	CG11425	Dmel_CG11425	NP_649395.1	305	uncharacterized protein Dmel_CG11425
3L	NT_037436.4	22501615	22502250	+	12798458	CG43312	Dmel_CG43312	NP_001246883.1	211	uncharacterized protein Dmel_CG43312
3L	NT_037436.4	22502994	22503755	-	12798459	CG43331	Dmel_CG43331	NP_001246884.1	253	uncharacterized protein Dmel_CG43331
3L	NT_037436.4	22503911	22504423	-	12798460	CG43330	Dmel_CG43330	NP_001246885.1	170	uncharacterized protein Dmel_CG43330
3L	NT_037436.4	22504594	22505178	-	12798461	CG43329	Dmel_CG43329	NP_001246886.1	194	uncharacterized protein Dmel_CG43329
3L	NT_037436.4	22548460	22549129	+	40474	CG11404	Dmel_CG11404	NP_649397.1	189	uncharacterized protein Dmel_CG11404, isoform A
3L	NT_037436.4	22548460	22549129	+	40474	CG11404	Dmel_CG11404	NP_001262212.1	186	uncharacterized protein Dmel_CG11404, isoform B
3L	NT_037436.4	22550321	22551871	+	40475	Trxr-2	Dmel_CG11401	NP_524216.1	516	thioredoxin reductase 2
3L	NT_037436.4	22582591	22615726	-	40476	CG14459	Dmel_CG14459	NP_001097662.2	161	uncharacterized protein Dmel_CG14459, isoform C
3L	NT_037436.4	22582591	22615726	-	40476	CG14459	Dmel_CG14459	NP_001303401.1	161	uncharacterized protein Dmel_CG14459, isoform E
3L	NT_037436.4	22582591	22615726	-	40476	CG14459	Dmel_CG14459	NP_001303400.1	161	uncharacterized protein Dmel_CG14459, isoform D
3L	NT_037436.4	22606439	22606876	+	40477	ND-B14.5AL	Dmel_CG6914	NP_649399.1	145	NADH dehydrogenase (ubiquinone) B14.5 A subunit-like
3L	NT_037436.4	22645627	22646236	+	3772380	CG33766	Dmel_CG33766	NP_001027140.1	178	uncharacterized protein Dmel_CG33766
3L	NT_037436.4	22646307	22646959	+	3772047	CG33767	Dmel_CG33767	NP_001027141.1	188	uncharacterized protein Dmel_CG33767
3L	NT_037436.4	22647187	22647748	+	3771840	CG33768	Dmel_CG33768	NP_001027142.1	167	uncharacterized protein Dmel_CG33768
3L	NT_037436.4	22647927	22648519	+	3772499	CG33769	Dmel_CG33769	NP_001027143.1	179	uncharacterized protein Dmel_CG33769
3L	NT_037436.4	22648672	22649287	+	3772256	CG33770	Dmel_CG33770	NP_001027144.2	185	uncharacterized protein Dmel_CG33770
3L	NT_037436.4	22649396	22649988	+	3772424	CG33771	Dmel_CG33771	NP_001027145.3	178	uncharacterized protein Dmel_CG33771
3L	NT_037436.4	22651855	22652525	-	3772205	CG33772	Dmel_CG33772	NP_001027146.4	185	uncharacterized protein Dmel_CG33772
3L	NT_037436.4	22678633	22679963	+	40479	CG14457	Dmel_CG14457	NP_001262213.1	270	uncharacterized protein Dmel_CG14457, isoform C
3L	NT_037436.4	22678633	22679963	+	40479	CG14457	Dmel_CG14457	NP_001014600.1	271	uncharacterized protein Dmel_CG14457, isoform B
3L	NT_037436.4	22679467	22679963	+	40479	CG14457	Dmel_CG14457	NP_649401.1	144	uncharacterized protein Dmel_CG14457, isoform A
3L	NT_037436.4	22686434	22687083	-	40480	CG14455	Dmel_CG14455	NP_649402.2	194	uncharacterized protein Dmel_CG14455
3L	NT_037436.4	22687385	22688150	+	40481	CG14456	Dmel_CG14456	NP_649403.1	198	uncharacterized protein Dmel_CG14456, isoform A
3L	NT_037436.4	22687385	22688150	+	40481	CG14456	Dmel_CG14456	NP_001137998.1	213	uncharacterized protein Dmel_CG14456, isoform B
3L	NT_037436.4	22692150	22692512	-	40482	CG14454	Dmel_CG14454	NP_649404.1	120	uncharacterized protein Dmel_CG14454, isoform A
3L	NT_037436.4	22692150	22692512	-	40482	CG14454	Dmel_CG14454	NP_001262214.1	120	uncharacterized protein Dmel_CG14454, isoform B
3L	NT_037436.4	22693436	22693789	-	40483	CG12546	Dmel_CG12546	NP_649405.2	117	uncharacterized protein Dmel_CG12546
3L	NT_037436.4	22694102	22694503	+	40484	CG14453	Dmel_CG14453	NP_649406.2	133	uncharacterized protein Dmel_CG14453
3L	NT_037436.4	22695970	22696323	+	40485	CG14452	Dmel_CG14452	NP_649407.1	117	uncharacterized protein Dmel_CG14452
3L	NT_037436.4	22697247	22697609	+	318036	CG32453	Dmel_CG32453	NP_001287146.1	120	uncharacterized protein Dmel_CG32453, isoform B
3L	NT_037436.4	22697247	22697609	+	318036	CG32453	Dmel_CG32453	NP_730733.1	120	uncharacterized protein Dmel_CG32453, isoform A
3L	NT_037436.4	22699474	22699830	+	19835569	CG45116	Dmel_CG45116	NP_001287147.1	118	uncharacterized protein Dmel_CG45116
3L	NT_037436.4	22712305	22713528	+	40486	CG11370	Dmel_CG11370	NP_649408.1	346	uncharacterized protein Dmel_CG11370, isoform A
3L	NT_037436.4	22712305	22713528	+	40486	CG11370	Dmel_CG11370	NP_001262215.1	341	uncharacterized protein Dmel_CG11370, isoform B
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_001262217.1	514	ADP-ribosylation factor GTPase activating protein 3, isoform F
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_730735.1	552	ADP-ribosylation factor GTPase activating protein 3, isoform B
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_001262216.1	513	ADP-ribosylation factor GTPase activating protein 3, isoform E
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_001097664.2	553	ADP-ribosylation factor GTPase activating protein 3, isoform H
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_649409.1	552	ADP-ribosylation factor GTPase activating protein 3, isoform A
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_001097663.1	552	ADP-ribosylation factor GTPase activating protein 3, isoform C
3L	NT_037436.4	22714944	22717051	-	40487	ArfGAP3	Dmel_CG6838	NP_001262218.1	549	ADP-ribosylation factor GTPase activating protein 3, isoform G
3L	NT_037436.4	22717978	22719702	+	318035	CG32452	Dmel_CG32452	NP_730737.1	574	uncharacterized protein Dmel_CG32452, isoform B
3L	NT_037436.4	22717978	22719702	+	318035	CG32452	Dmel_CG32452	NP_730736.1	574	uncharacterized protein Dmel_CG32452, isoform A
3L	NT_037436.4	22717978	22719702	+	318035	CG32452	Dmel_CG32452	NP_001287148.1	574	uncharacterized protein Dmel_CG32452, isoform C
3L	NT_037436.4	22721247	22722041	-	40488	CG14451	Dmel_CG14451	NP_649410.1	264	uncharacterized protein Dmel_CG14451
3L	NT_037436.4	22724566	22726117	+	40489	mael	Dmel_CG11254	NP_001303390.1	459	maelstrom, isoform D
3L	NT_037436.4	22724566	22726117	+	40489	mael	Dmel_CG11254	NP_788566.1	462	maelstrom, isoform C
3L	NT_037436.4	22724566	22726117	+	40489	mael	Dmel_CG11254	NP_524217.1	459	maelstrom, isoform A
3L	NT_037436.4	22724566	22726117	+	40489	mael	Dmel_CG11254	NP_730739.1	459	maelstrom, isoform B
3L	NT_037436.4	22726544	22727716	-	40490	CG14450	Dmel_CG14450	NP_649411.1	372	uncharacterized protein Dmel_CG14450, isoform A
3L	NT_037436.4	22727528	22727716	-	40490	CG14450	Dmel_CG14450	NP_001262219.1	62	uncharacterized protein Dmel_CG14450, isoform B
3L	NT_037436.4	22728411	22733039	+	40491	CG11367	Dmel_CG11367	NP_649412.1	362	uncharacterized protein Dmel_CG11367
3L	NT_037436.4	22729809	22731413	+	318037	CG32454	Dmel_CG32454	NP_730740.1	534	uncharacterized protein Dmel_CG32454
3L	NT_037436.4	22733454	22738269	-	40492	CG11241	Dmel_CG11241	NP_001303389.1	518	uncharacterized protein Dmel_CG11241, isoform C
3L	NT_037436.4	22733454	22738269	-	40492	CG11241	Dmel_CG11241	NP_730741.2	518	uncharacterized protein Dmel_CG11241, isoform B
3L	NT_037436.4	22734632	22738269	-	40492	CG11241	Dmel_CG11241	NP_649413.3	508	uncharacterized protein Dmel_CG11241, isoform A
3L	NT_037436.4	22739101	22741176	-	46158	l(3)04053	Dmel_CG11238	NP_649414.1	585	lethal (3) 04053
3L	NT_037436.4	22745477	22747717	+	2768961	CG7369	Dmel_CG7369	NP_649415.2	680	CG7369
3L	NT_037436.4	22749618	22784487	+	40495	SPoCk	Dmel_CG32451	NP_730742.1	1034	secretory pathway calcium atpase, isoform B
3L	NT_037436.4	22759977	22784487	+	40495	SPoCk	Dmel_CG32451	NP_001097666.1	997	secretory pathway calcium atpase, isoform D
3L	NT_037436.4	22759977	22784487	+	40495	SPoCk	Dmel_CG32451	NP_001262220.1	1062	secretory pathway calcium atpase, isoform G
3L	NT_037436.4	22775114	22784487	+	40495	SPoCk	Dmel_CG32451	NP_001246887.1	917	secretory pathway calcium atpase, isoform F
3L	NT_037436.4	22775114	22784487	+	40495	SPoCk	Dmel_CG32451	NP_001163496.1	917	secretory pathway calcium atpase, isoform E
3L	NT_037436.4	22775327	22784487	+	40495	SPoCk	Dmel_CG32451	NP_730744.1	924	secretory pathway calcium atpase, isoform C
3L	NT_037436.4	22777135	22784487	+	40495	SPoCk	Dmel_CG32451	NP_730745.1	901	secretory pathway calcium atpase, isoform A
3L	NT_037436.4	22788521	22789138	+	40497	CG14448	Dmel_CG14448	NP_649418.1	205	uncharacterized protein Dmel_CG14448
3L	NT_037436.4	22797558	22801314	-	43924	jim	Dmel_CG11352	NP_001262221.1	938	jim, isoform F
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_001262223.1	792	jim, isoform I
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_730746.1	820	jim, isoform H
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_651956.1	820	jim, isoform C
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_001262222.1	794	jim, isoform G
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_001246888.1	825	jim, isoform E
3L	NT_037436.4	22797912	22801314	-	43924	jim	Dmel_CG11352	NP_001014601.1	820	jim, isoform D
3L	NT_037436.4	22836735	22837022	-	19834929	CG45428	Dmel_CG45428	NP_001287149.1	95	uncharacterized protein Dmel_CG45428
3L	NT_037436.4	22837146	22837736	+	40501	CG11226	Dmel_CG11226	NP_649420.2	196	uncharacterized protein Dmel_CG11226
3L	NT_037436.4	22852394	22853248	-	318043	CG32462	Dmel_CG32462	NP_730750.1	284	uncharacterized protein Dmel_CG32462
3L	NT_037436.4	22854827	22855995	-	40502	CG32459	Dmel_CG32459	NP_730752.1	355	uncharacterized protein Dmel_CG32459
3L	NT_037436.4	22860787	22861245	+	40503	CG13239	Dmel_CG13239	NP_649422.1	152	uncharacterized protein Dmel_CG13239
3L	NT_037436.4	22863983	22864159	+	40504	CG33169	Dmel_CG33169	NP_001137999.1	58	uncharacterized protein Dmel_CG33169, isoform C
3L	NT_037436.4	22863983	22864159	+	40504	CG33169	Dmel_CG33169	NP_788568.1	58	uncharacterized protein Dmel_CG33169, isoform A
3L	NT_037436.4	22864911	22867463	+	326267	CG33170	Dmel_CG33170	NP_001262224.1	71	uncharacterized protein Dmel_CG33170, isoform C
3L	NT_037436.4	22864911	22867463	+	326267	CG33170	Dmel_CG33170	NP_001138000.1	71	uncharacterized protein Dmel_CG33170, isoform B
3L	NT_037436.4	22865541	22865964	+	326267	CG33170	Dmel_CG33170	NP_788569.1	98	uncharacterized protein Dmel_CG33170, isoform A
3L	NT_037436.4	22867540	22868152	-	40505	CG11137	Dmel_CG11137	NP_649424.1	166	uncharacterized protein Dmel_CG11137, isoform A
3L	NT_037436.4	22867540	22868152	-	40505	CG11137	Dmel_CG11137	NP_001303388.1	166	uncharacterized protein Dmel_CG11137, isoform B
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_001097667.1	182	ADP ribosylation factor at 79F, isoform F
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_001262225.1	182	ADP ribosylation factor at 79F, isoform J
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_730760.1	182	ADP ribosylation factor at 79F, isoform E
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_001097668.2	182	ADP ribosylation factor at 79F, isoform I
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_730757.1	182	ADP ribosylation factor at 79F, isoform A
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_730759.1	182	ADP ribosylation factor at 79F, isoform H
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_730758.1	182	ADP ribosylation factor at 79F, isoform C
3L	NT_037436.4	22869082	22869989	-	40506	Arf79F	Dmel_CG8385	NP_476955.1	182	ADP ribosylation factor at 79F, isoform B
3L	NT_037436.4	22872281	22873688	+	40507	CG11109	Dmel_CG11109	NP_730761.1	439	uncharacterized protein Dmel_CG11109, isoform B
3L	NT_037436.4	22872612	22873688	+	40507	CG11109	Dmel_CG11109	NP_649425.1	358	uncharacterized protein Dmel_CG11109, isoform A
3L	NT_037436.4	22874602	22877994	-	40508	Chro	Dmel_CG10712	NP_730763.2	926	chromator, isoform C
3L	NT_037436.4	22874602	22877994	-	40508	Chro	Dmel_CG10712	NP_001262226.1	926	chromator, isoform D
3L	NT_037436.4	22874602	22877994	-	40508	Chro	Dmel_CG10712	NP_730762.2	926	chromator, isoform B
3L	NT_037436.4	22874602	22877994	-	40508	Chro	Dmel_CG10712	NP_001287150.1	926	chromator, isoform E
3L	NT_037436.4	22874602	22877994	-	40508	Chro	Dmel_CG10712	NP_649426.3	926	chromator, isoform A
3L	NT_037436.4	22879366	22880787	+	40509	Ssl1	Dmel_CG11115	NP_649427.1	438	suppressor of stem-loop mutation, isoform A
3L	NT_037436.4	22879366	22880787	+	40509	Ssl1	Dmel_CG11115	NP_001262227.1	438	suppressor of stem-loop mutation, isoform B
3L	NT_037436.4	22891367	22893248	+	40510	slif	Dmel_CG11128	NP_730765.1	604	slimfast, isoform B
3L	NT_037436.4	22891367	22893248	+	40510	slif	Dmel_CG11128	NP_649428.1	604	slimfast, isoform C
3L	NT_037436.4	22891367	22893248	+	40510	slif	Dmel_CG11128	NP_730764.1	604	slimfast, isoform A
3L	NT_037436.4	22899268	22900097	+	40511	CG11131	Dmel_CG11131	NP_649429.1	229	uncharacterized protein Dmel_CG11131, isoform A
3L	NT_037436.4	22899268	22900097	+	40511	CG11131	Dmel_CG11131	NP_001262228.1	229	uncharacterized protein Dmel_CG11131, isoform B
3L	NT_037436.4	22902004	22905183	+	40512	BoYb	Dmel_CG11133	NP_649430.1	1059	brother of Yb
3L	NT_037436.4	22911926	22914245	+	40513	CG12768	Dmel_CG12768	NP_001262231.1	429	uncharacterized protein Dmel_CG12768, isoform D
3L	NT_037436.4	22911926	22914245	+	40513	CG12768	Dmel_CG12768	NP_001262230.1	429	uncharacterized protein Dmel_CG12768, isoform C
3L	NT_037436.4	22911926	22914245	+	40513	CG12768	Dmel_CG12768	NP_649431.1	429	uncharacterized protein Dmel_CG12768, isoform A
3L	NT_037436.4	22911926	22914245	+	40513	CG12768	Dmel_CG12768	NP_001262229.1	429	uncharacterized protein Dmel_CG12768, isoform B
3L	NT_037436.4	22945787	22951390	+	40514	Mes2	Dmel_CG11100	NP_730768.1	437	Mesoderm-expressed 2, isoform B
3L	NT_037436.4	22946311	22951390	+	40514	Mes2	Dmel_CG11100	NP_730769.2	372	Mesoderm-expressed 2, isoform C
3L	NT_037436.4	22954527	22955285	-	318042	CG32461	Dmel_CG32461	NP_730770.1	252	uncharacterized protein Dmel_CG32461
3L	NT_037436.4	22987669	22988160	+	318040	CG32457	Dmel_CG32457	NP_730771.1	163	uncharacterized protein Dmel_CG32457, isoform B
3L	NT_037436.4	22987669	22988160	+	318040	CG32457	Dmel_CG32457	NP_001163497.1	141	uncharacterized protein Dmel_CG32457, isoform C
3L	NT_037436.4	23002308	23029891	+	40515	nrm	Dmel_CG43079	NP_001036621.1	1036	neuromusculin, isoform B
3L	NT_037436.4	23002308	23037691	+	40515	nrm	Dmel_CG43079	NP_001246893.1	1209	neuromusculin, isoform H
3L	NT_037436.4	23002308	23038158	+	40515	nrm	Dmel_CG43079	NP_001246890.1	2192	neuromusculin, isoform E
3L	NT_037436.4	23002308	23038158	+	40515	nrm	Dmel_CG43079	NP_001262232.1	1846	neuromusculin, isoform I
3L	NT_037436.4	23002308	23038158	+	40515	nrm	Dmel_CG43079	NP_001246891.1	1097	neuromusculin, isoform F
3L	NT_037436.4	23002308	23038158	+	40515	nrm	Dmel_CG43079	NP_524218.4	1087	neuromusculin, isoform A
3L	NT_037436.4	23093714	23095297	-	43864	RpL10	Dmel_CG17521	NP_651954.3	218	ribosomal protein L10, isoform C
3L	NT_037436.4	23093714	23095297	-	43864	RpL10	Dmel_CG17521	NP_730773.4	218	ribosomal protein L10, isoform D
3L	NT_037436.4	23093714	23095297	-	43864	RpL10	Dmel_CG17521	NP_001262233.1	218	ribosomal protein L10, isoform E
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_524918.1	336	casein kinase IIalpha, isoform B
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_730775.1	336	casein kinase IIalpha, isoform C
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_001287151.1	336	casein kinase IIalpha, isoform F
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_730774.1	336	casein kinase IIalpha, isoform A
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_001287152.1	336	casein kinase IIalpha, isoform G
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_001036624.1	336	casein kinase IIalpha, isoform D
3L	NT_037436.4	23102252	23103262	+	48448	CkIIalpha	Dmel_CG17520	NP_001287153.1	336	casein kinase IIalpha, isoform E
3L	NT_037436.4	23126208	23132184	+	2768951	CG33217	Dmel_CG33217	NP_996147.1	699	uncharacterized protein Dmel_CG33217
3L	NT_037436.4	23147895	23150387	-	317987	Vps11	Dmel_CG32350	NP_730776.1	830	vacuolar protein sorting 11
3L	NT_037436.4	23174467	23185691	+	3885665	CG34031	Dmel_CG34031	NP_001246894.1	219	uncharacterized protein Dmel_CG34031
3L	NT_037436.4	23211008	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_001262234.1	499	nicotinic acetylcholine receptor alpha4, isoform G
3L	NT_037436.4	23211008	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_001097669.2	539	nicotinic acetylcholine receptor alpha4, isoform C
3L	NT_037436.4	23211008	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_001303394.1	539	nicotinic acetylcholine receptor alpha4, isoform H
3L	NT_037436.4	23249102	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_536742.3	384	nicotinic acetylcholine receptor alpha4, isoform E
3L	NT_037436.4	23262723	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_001246895.1	371	nicotinic acetylcholine receptor alpha4, isoform D
3L	NT_037436.4	23262723	23283930	+	40521	nAChRalpha4	Dmel_CG12414	NP_001246896.1	371	nicotinic acetylcholine receptor alpha4, isoform F
3L	NT_037436.4	23318838	23338046	-	40517	alpha-Cat	Dmel_CG17947	NP_524219.1	917	alpha catenin, isoform A
3L	NT_037436.4	23329838	23338046	-	40517	alpha-Cat	Dmel_CG17947	NP_001287154.1	372	alpha catenin, isoform B
3L	NT_037436.4	23339435	23341519	+	317928	ND-MLRQ	Dmel_CG32230	NP_730778.1	83	NADH dehydrogenase (ubiquinone) MLRQ subunit, isoform B
3L	NT_037436.4	23339435	23341519	+	317928	ND-MLRQ	Dmel_CG32230	NP_001262235.1	83	NADH dehydrogenase (ubiquinone) MLRQ subunit, isoform C
3L	NT_037436.4	23339435	23341519	+	317928	ND-MLRQ	Dmel_CG32230	NP_730777.1	83	NADH dehydrogenase (ubiquinone) MLRQ subunit, isoform A
3L	NT_037436.4	23566842	23649456	+	3355150	AGO3	Dmel_CG40300	NP_001163498.1	866	argonaute 3, isoform G
3L	NT_037436.4	23566842	23689571	+	3355150	AGO3	Dmel_CG40300	NP_001036628.2	867	argonaute 3, isoform F
3L	NT_037436.4	23566842	23689571	+	3355150	AGO3	Dmel_CG40300	NP_001036629.2	867	argonaute 3, isoform E
3L	NT_037436.4	23566842	23689571	+	3355150	AGO3	Dmel_CG40300	NP_001036627.2	867	argonaute 3, isoform D
3L	NT_037436.4	23715125	23716643	+	7354399	CG17454	Dmel_CG17454	NP_001138001.1	243	uncharacterized protein Dmel_CG17454, isoform A
3L	NT_037436.4	23715715	23716643	+	7354399	CG17454	Dmel_CG17454	NP_001262236.1	230	uncharacterized protein Dmel_CG17454, isoform B
3L	NT_037436.4	23726867	23727946	+	3355149	CG40298	Dmel_CG40298	NP_001036631.1	359	uncharacterized protein Dmel_CG40298
3L	NT_037436.4	23740212	23748859	+	4379919	CG17698	Dmel_CG17698	NP_001036634.1	676	uncharacterized protein Dmel_CG17698, isoform D
3L	NT_037436.4	23740212	23748859	+	4379919	CG17698	Dmel_CG17698	NP_001036633.2	694	uncharacterized protein Dmel_CG17698, isoform F
3L	NT_037436.4	23740212	23748859	+	4379919	CG17698	Dmel_CG17698	NP_001262237.1	616	uncharacterized protein Dmel_CG17698, isoform E
3L	NT_037436.4	23746247	23748859	+	4379919	CG17698	Dmel_CG17698	NP_001036632.1	366	uncharacterized protein Dmel_CG17698, isoform A
3L	NT_037436.4	23784253	23787405	+	14462915	CG43968	Dmel_CG43968	NP_001262238.1	1026	uncharacterized protein Dmel_CG43968
3L	NT_037436.4	23839922	23986308	-	3355093	CG40470	Dmel_CG40470	NP_001036635.1	941	uncharacterized protein Dmel_CG40470
3L	NT_037436.4	24028678	24035789	+	3355079	CG40045	Dmel_CG40045	NP_001036640.1	168	uncharacterized protein Dmel_CG40045, isoform A
3L	NT_037436.4	24028678	24035789	+	3355079	CG40045	Dmel_CG40045	NP_001262240.1	167	uncharacterized protein Dmel_CG40045, isoform D
3L	NT_037436.4	24034978	24035789	+	3355079	CG40045	Dmel_CG40045	NP_001262239.1	132	uncharacterized protein Dmel_CG40045, isoform C
3L	NT_037436.4	24035496	24035789	+	3355079	CG40045	Dmel_CG40045	NP_001246897.1	97	uncharacterized protein Dmel_CG40045, isoform B
3L	NT_037436.4	24079466	24297743	+	3355084	Snap25	Dmel_CG40452	NP_001036641.1	212	Synaptosomal-associated protein 25kDa, isoform A
3L	NT_037436.4	24079466	24297743	+	3355084	Snap25	Dmel_CG40452	NP_001036642.2	212	Synaptosomal-associated protein 25kDa, isoform C
3L	NT_037436.4	24325056	24401413	+	5740633	nvd	Dmel_CG40050	NP_001097670.1	429	neverland
3L	NT_037436.4	24537475	24537912	+	3355089	mRpS5	Dmel_CG40049	NP_001036651.1	47	mitochondrial ribosomal protein S5, isoform D
3L	NT_037436.4	24537475	24543491	+	3355089	mRpS5	Dmel_CG40049	NP_001036652.1	407	mitochondrial ribosomal protein S5, isoform C
3L	NT_037436.4	24537475	24543491	+	3355089	mRpS5	Dmel_CG40049	NP_001036653.1	407	mitochondrial ribosomal protein S5, isoform A
3L	NT_037436.4	24725865	24757792	+	3355151	scro	Dmel_CG17594	NP_001015473.1	468	scarecrow, isoform A
3L	NT_037436.4	24725865	24734277	+	3355151	scro	Dmel_CG17594	NP_001104399.1	293	scarecrow, isoform B
3L	NT_037436.4	24725865	24757792	+	3355151	scro	Dmel_CG17594	NP_001104400.1	439	scarecrow, isoform C
3L	NT_037436.4	24728352	24757792	+	3355151	scro	Dmel_CG17594	NP_001104401.2	307	scarecrow, isoform F
3L	NT_037436.4	24927264	24927669	+	8673970	CG40472	Dmel_CG40472	NP_001163845.1	94	uncharacterized protein Dmel_CG40472
3L	NT_037436.4	24976346	24976750	+	3355155	ND-AGGG	Dmel_CG40002	NP_001015476.1	94	NADH dehydrogenase (ubiquinone) AGGG subunit, isoform A
3L	NT_037436.4	24976346	24976750	+	3355155	ND-AGGG	Dmel_CG40002	NP_001287638.1	94	NADH dehydrogenase (ubiquinone) AGGG subunit, isoform B
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163849.1	1641	SET domain containing 1, isoform G
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163851.1	1641	SET domain containing 1, isoform I
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163850.1	1641	SET domain containing 1, isoform H
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163848.1	1641	SET domain containing 1, isoform F
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001015222.1	1641	SET domain containing 1, isoform B
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001015221.1	1641	SET domain containing 1, isoform A
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163846.1	1641	SET domain containing 1, isoform D
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001104406.1	1641	SET domain containing 1, isoform C
3L	NT_037436.4	25109345	25114897	+	3354971	Set1	Dmel_CG40351	NP_001163847.1	1641	SET domain containing 1, isoform E
3L	NT_037436.4	25115219	25115703	-	3354977	MED21	Dmel_CG17397	NP_001015223.1	142	mediator complex subunit 21, isoform A
3L	NT_037436.4	25115219	25115703	-	3354977	MED21	Dmel_CG17397	NP_001015224.1	142	mediator complex subunit 21, isoform B
3L	NT_037436.4	25120902	25121217	+	5740185	UQCR-11	Dmel_CG41623	NP_001163853.1	85	Ubiquinol-cytochrome c reductase 11 kDa subunit, isoform C
3L	NT_037436.4	25120902	25121641	+	5740185	UQCR-11	Dmel_CG41623	NP_001287639.1	35	Ubiquinol-cytochrome c reductase 11 kDa subunit, isoform F
3L	NT_037436.4	25120902	25121217	+	5740185	UQCR-11	Dmel_CG41623	NP_001163852.1	85	Ubiquinol-cytochrome c reductase 11 kDa subunit, isoform B
3L	NT_037436.4	25120902	25121217	+	5740185	UQCR-11	Dmel_CG41623	NP_001104407.2	85	Ubiquinol-cytochrome c reductase 11 kDa subunit, isoform D
3L	NT_037436.4	25120902	25121641	+	5740185	UQCR-11	Dmel_CG41623	NP_001263163.1	35	Ubiquinol-cytochrome c reductase 11 kDa subunit, isoform E
3L	NT_037436.4	25236995	25670849	-	26067050	CG45782	Dmel_CG45782	NP_001303415.1	615	uncharacterized protein Dmel_CG45782
3L	NT_037436.4	25752960	25762670	-	3355111	FASN3	Dmel_CG17374	NP_001015405.3	2394	fatty acid synthase 3
3L	NT_037436.4	25798524	25978136	-	3354941	CG40178	Dmel_CG40178	NP_001015187.2	780	uncharacterized protein Dmel_CG40178, isoform A
3L	NT_037436.4	25798524	25978136	-	3354941	CG40178	Dmel_CG40178	NP_001015188.2	780	uncharacterized protein Dmel_CG40178, isoform B
3L	NT_037436.4	25798524	25978136	-	3354941	CG40178	Dmel_CG40178	NP_001263164.1	780	uncharacterized protein Dmel_CG40178, isoform C
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001163855.1	421	uncharacterized protein Dmel_CG40160, isoform E
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001015213.3	421	uncharacterized protein Dmel_CG40160, isoform D
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001015212.1	421	uncharacterized protein Dmel_CG40160, isoform A
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001015214.1	421	uncharacterized protein Dmel_CG40160, isoform F
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001163856.1	421	uncharacterized protein Dmel_CG40160, isoform G
3L	NT_037436.4	26224649	26225914	+	3354965	CG40160	Dmel_CG40160	NP_001263165.1	421	uncharacterized protein Dmel_CG40160, isoform H
3L	NT_037436.4	26298455	26305572	-	5740851	CG41284	Dmel_CG41284	NP_001104417.3	340	uncharacterized protein Dmel_CG41284
3L	NT_037436.4	26354140	26356237	-	8674042	CG42598	Dmel_CG42598	NP_001163857.2	340	uncharacterized protein Dmel_CG42598
3L	NT_037436.4	27083461	27083839	-	5740664	CG40228	Dmel_CG40228	NP_001263166.1	82	uncharacterized protein Dmel_CG40228, isoform D
3L	NT_037436.4	27083461	27083839	-	5740664	CG40228	Dmel_CG40228	NP_001104426.1	82	uncharacterized protein Dmel_CG40228, isoform C
3L	NT_037436.4	27083461	27083839	-	5740664	CG40228	Dmel_CG40228	NP_001263167.1	77	uncharacterized protein Dmel_CG40228, isoform E
3L	NT_037436.4	27083565	27083839	-	5740664	CG40228	Dmel_CG40228	NP_001104425.2	43	uncharacterized protein Dmel_CG40228, isoform F
3L	NT_037436.4	27136612	27157935	+	3354896	vtd	Dmel_CG17436	NP_001015132.1	715	verthandi, isoform A
3L	NT_037436.4	27136612	27147811	+	3354896	vtd	Dmel_CG17436	NP_001287640.1	633	verthandi, isoform B
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001104430.1	204	ribosomal protein L15, isoform C
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001245398.1	204	ribosomal protein L15, isoform I
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001015156.1	204	ribosomal protein L15, isoform B
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001104429.2	204	ribosomal protein L15, isoform E
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001015155.1	204	ribosomal protein L15, isoform A
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001245395.1	204	ribosomal protein L15, isoform F
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001245397.1	204	ribosomal protein L15, isoform H
3L	NT_037436.4	27267610	27268397	+	3354918	RpL15	Dmel_CG17420	NP_001245396.1	204	ribosomal protein L15, isoform G
3L	NT_037436.4	27279375	27350606	+	3354919	Dbp80	Dmel_CG17023	NP_001015152.2	279	dead box protein 80, isoform D
3L	NT_037436.4	27279375	27422159	+	3354919	Dbp80	Dmel_CG17023	NP_001263168.1	481	dead box protein 80, isoform E
3L	NT_037436.4	27279375	27391042	+	3354919	Dbp80	Dmel_CG17023	NP_001263170.1	354	dead box protein 80, isoform G
3L	NT_037436.4	27279375	27421115	+	3354919	Dbp80	Dmel_CG17023	NP_001015151.1	447	dead box protein 80, isoform B
3L	NT_037436.4	27332054	27422159	+	3354919	Dbp80	Dmel_CG17023	NP_001263169.1	316	dead box protein 80, isoform F
3L	NT_037436.4	27842725	27858203	-	3355041	eIF-4B	Dmel_CG10837	NP_001015319.1	459	eukaryotic initiation factor 4B, isoform B
3L	NT_037436.4	27844591	27858203	-	3355041	eIF-4B	Dmel_CG10837	NP_001263161.1	392	eukaryotic initiation factor 4B, isoform F
3L	NT_037436.4	27856703	27858203	-	3355041	eIF-4B	Dmel_CG10837	NP_001015320.1	389	eukaryotic initiation factor 4B, isoform E
3L	NT_037436.4	27856776	27858203	-	3355041	eIF-4B	Dmel_CG10837	NP_001015321.1	390	eukaryotic initiation factor 4B, isoform A
3L	NT_037436.4	27967331	28012551	-	3355040	CG17514	Dmel_CG17514	NP_001015316.1	2630	uncharacterized protein Dmel_CG17514, isoform A
3L	NT_037436.4	28011710	28012551	-	3355040	CG17514	Dmel_CG17514	NP_001163842.2	41	uncharacterized protein Dmel_CG17514, isoform G
