Nextflow workflow report

[cranky_torricelli]

Workflow execution completed successfully!
Run times
05-Nov-2019 08:06:30 - 07-Nov-2019 20:21:36 (duration: 2d 12h 15m 6s)
  31295 succeeded  
  0 cached  
  0 ignored  
  30 failed  
Nextflow command
nextflow /home/rpetit3/repos/bactopia/main.nf --accessions ../lactobacillus-accessions.txt --datasets /home/rpetit3/datasets --species lactobacillus --coverage 100 --cpus 4 -profile slurm --min_genome_size 1000000 --max_genome_size 4200000
CPU-Hours
3'052.4 (0% failed)
Launch directory
/home/rpetit3/projects/lactobacillus/bactopia
Work directory
/home/rpetit3/projects/lactobacillus/bactopia/work
Project directory
/home/rpetit3/repos/bactopia
Script name
main.nf
Script ID
b763323ed40fb19eda2aff0c1a481f11
Workflow session
90a3fb3c-b891-4c5a-a6b5-5c6159277170
Workflow profile
slurm
Nextflow version
version 19.10.0, build 5170 (21-10-2019 15:07 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)