# .coveragerc to control coverage.py
[run]
branch = True
source =  pytraj
#plugins = Cython.Coverage

[report]
# Regexes for lines to exclude from consideration
exclude_lines =
    # Have to re-enable the standard pragma
    pragma: no cover

    # Don't complain about missing debug-only code:
    def __repr__
    def __str__
    if self.debug

    # progress bar
    def make_bar

    # Don't complain if tests don't hit defensive assertion code:
    raise RuntimeError
    raise NotImplementedError
    raise ImportError
    except ImportError
    except NameError
    if PY3
    if not PY3
    to_dataframe
    if dtype == 'dataframe'
    warn
    def dssp_full_residues
    def show():

    # Don't complain if non-runnable code isn't run:
    if 0:
    if __name__ == .__main__.:

omit = 
    
    *.so
    *.pyx
    *.pxd
    */externals/*
    */sandbox/*
    */amber_wrapper/*
