Bootstrap: docker
From: nfcore/base

%labels
    MAINTAINER Robert A. Petit III <robert.petit@emory.edu>
    DESCRIPTION Singularity image containing requirements for the Bactopia CONDA_ENV process
    VERSION 1.1.0

%environment
    PATH=/opt/conda/envs/bactopia-CONDA_ENV/bin:$PATH
    export PATH

%files
    conda/linux/CONDA_ENV.yml /

%post
    /opt/conda/bin/conda env create -f /CONDA_ENV.yml
    /opt/conda/bin/conda clean -a
