Package: TBRDist
Title: Rearrangement Distances Between Unrooted Phylogenetic Trees
Version: 1.0.2
Authors@R: c(person("Martin R.", 'Smith',
                  email = "martin.smith@durham.ac.uk", 
                  role = c("aut", "cre", "cph"), 
                  comment = c(ORCID = "0000-0001-5660-1727")),
               person(given = "Chris", family = "Whidden",
                  email = "cwhidden@fredhutch.org", role = c("cph"))
            )
License: GPL (>= 3)
Copyright: Underlying C++ code copyright 2018 Chris Whidden.
Description: Fast calculation of the Subtree Prune and Regraft (SPR),
  Tree Bisection and Reconnection (TBR) and Replug distances between 
  unrooted trees, using the algorithms of Whidden and 
  Matsen (2017) <arxiv:1511.07529>.
URL: https://ms609.github.io/TBRDist/,
  https://github.com/ms609/TBRDist/, 
  https://github.com/cwhidden/uspr/
BugReports: https://github.com/ms609/TBRDist/issues/
Depends: R (>= 3.4.0)
Imports:
  ape,
  Rdpack,
  TreeDist,
  TreeTools (>= 1.1.0)
Suggests:
  knitr,
  rmarkdown,
  testthat
LinkingTo: 
  BH,
  Rcpp
SystemRequirements: C++11
RdMacros: Rdpack
VignetteBuilder: knitr
LazyData: true
ByteCompile: true
Encoding: UTF-8
X-schema.org-keywords: phylogenetics, tree-distance
Language: en-GB
RoxygenNote: 7.1.1
Roxygen: list(markdown = TRUE)
