Introduction
Getting started
Installation
Creating a new workflow
Using an existing workflow
Modules
Macros
Extending MIA
Running an existing workflow
- In Fiji, run the plugin from Plugins > Bristol WBIF > Modular Image Analysis
- Click "Load" and select the .mia workflow file
- Depending on workflow configuration, a number of controls may be visible
- When ready, click "Run" to start the analysis
- While processing the status panel will display the number of files completed (batch mode) or a summary of the ongoing task (single file mode)
- When finished, "Complete" will be displayed in the status panel. Output XLS files will be saved in the input directory.