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Save image
Description
Save an image from the workspace to file.
Parameters
- Input image
- Description: Image to be saved to file.
- Type: InputImageP
- Save location
- Description: Select where the image should be saved.
- "Mirrored directory" Save the image to a new directory structure which has the same layout as the input. This is useful when batch processing from a multi-layer folder structure. The subdirectory layout will match that of the input structure, but will have its root at the folder specified in "Mirrored directory root".
- "Match Output Control" Save the image to the folder specified by the "Save location" parameter in "Output control".
- "Save with input file" Save the image in the same file as the root file for this workspace (i.e. the image specified in "Input control".
- "Specific location" Save the image to a specific folder. - Type: ChoiceP
- Default value: Save with input file
- Choices:
- Mirrored directory
- Match Output Control
- Save with input file
- Specific location
- Mirrored directory root
- Description: The root path for the mirrored directory structure. This path is the equivalent of the folder specified in "Input control". All subfolders will be in the same relative locations to their input counterparts.
- Type: FolderPathP
- File path
- Description: Path to folder where images will be saved.
- Type: FolderPathP
- Save name mode
- Description: Control how saved image names will be generated.
- "Match input file name" Use the same name as the root file for this workspace (i.e. the input file in "Input control".
- "Specific name" Use a specific name for the output file. Care should be taken with this when working in batch mode as it's easy to continuously write over output images. - Type: ChoiceP
- Default value: Match input file name
- Choices:
- Match input file name
- Specific name
- File name
- Description: Filename for saved image. Care should be taken with this when working in batch mode as it's easy to continuously write over output images.
- Type: StringP
- Append series mode
- Description: Add the series number as a suffix to each filename. Series numbers are prepended by "S".
- Type: ChoiceP
- Default value: Series number
- Choices:
- None
- Series name
- Series number
- Append date/time mode
- Description: Add a timestamp suffix to each filename. Timestamps are in the format "yyyy-MM-dd_HH-mm-ss".
- Type: ChoiceP
- Default value: Never
- Choices:
- Always
- If file exists
- Never
- Add filename suffix
- Description: A custom suffix to be added to each filename.
- Type: StringP
- File format
- Type: ChoiceP
- Default value: TIF
- Choices:
- Channel mode
- Description: Control whether saved images should be in ImageJ "Composite" (display all channels simultaneously) or "Color" (display one channel at a time) mode.
- Type: ChoiceP
- Default value: Composite
- Choices:
- Colour (separate channels)
- Composite
- Save as RGB
- Description: Convert images to RGB prior to saving. This is useful for displaying multi-channel images to a format that can be easily viewed outside ImageJ.
- Type: BooleanP
- Default value: false
- Compression mode
- Type: ChoiceP
- Default value: None
- Choices:
- Quality (0-100)
- Type: IntegerP
- Default value: 100
- Frame rate (fps)
- Type: IntegerP
- Default value: 25
- Flatten overlay
- Description: Flatten any overlay elements onto the image prior to saving.
- Type: BooleanP
- Default value: false