Motif ID: MSX2

Z-value: 0.092


Transcription factors associated with MSX2:

Gene SymbolEntrez IDGene Name
MSX2 ENSG00000120149.7 MSX2

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
MSX2hg19_v2_chr5_+_174151536_1741516100.166.8e-01Click!


Activity profile for motif MSX2.

activity profile for motif MSX2


Sorted Z-values histogram for motif MSX2

Sorted Z-values for motif MSX2



Network of associatons between targets according to the STRING database.



First level regulatory network of MSX2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chrX_+_113818545 0.056 ENST00000371951.1
ENST00000276198.1
ENST00000371950.3
HTR2C


5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled


chr2_+_90248739 0.041 ENST00000468879.1
IGKV1D-43
immunoglobulin kappa variable 1D-43
chr7_+_100183927 0.041 ENST00000241071.6
ENST00000360609.2
FBXO24

F-box protein 24

chr14_-_88200641 0.037 ENST00000556168.1
RP11-1152H15.1
RP11-1152H15.1
chr22_+_46476192 0.032 ENST00000443490.1
FLJ27365
hsa-mir-4763
chr6_-_167040693 0.029 ENST00000366863.2
RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr6_-_167040731 0.027 ENST00000265678.4
RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr3_-_151034734 0.026 ENST00000260843.4
GPR87
G protein-coupled receptor 87
chr17_+_67759813 0.026 ENST00000587241.1
AC003051.1
AC003051.1
chr19_+_42817450 0.023 ENST00000301204.3
TMEM145
transmembrane protein 145
chr5_-_148758839 0.023 ENST00000261796.3
IL17B
interleukin 17B
chr6_+_78400375 0.022 ENST00000602452.2
MEI4
meiosis-specific 4 homolog (S. cerevisiae)
chr12_+_9102632 0.021 ENST00000539240.1
KLRG1
killer cell lectin-like receptor subfamily G, member 1
chrX_+_89176881 0.020 ENST00000283891.5
ENST00000561129.2
TGIF2LX

TGFB-induced factor homeobox 2-like, X-linked

chr6_-_139613269 0.019 ENST00000358430.3
TXLNB
taxilin beta
chr22_-_30960876 0.017 ENST00000401975.1
ENST00000428682.1
ENST00000423299.1
GAL3ST1


galactose-3-O-sulfotransferase 1


chr14_+_32798547 0.015 ENST00000557354.1
ENST00000557102.1
ENST00000557272.1
AKAP6


A kinase (PRKA) anchor protein 6


chr1_+_244515930 0.013 ENST00000366537.1
ENST00000308105.4
C1orf100

chromosome 1 open reading frame 100

chr4_-_19458597 0.013 ENST00000505347.1
RP11-3J1.1
RP11-3J1.1
chr19_+_11485333 0.013 ENST00000312423.2
SWSAP1
SWIM-type zinc finger 7 associated protein 1
chr6_+_130339710 0.012 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
L3MBTL3


l(3)mbt-like 3 (Drosophila)


chr20_-_50722183 0.012 ENST00000371523.4
ZFP64
ZFP64 zinc finger protein
chr3_-_114866084 0.012 ENST00000357258.3
ZBTB20
zinc finger and BTB domain containing 20
chr5_+_66254698 0.011 ENST00000405643.1
ENST00000407621.1
ENST00000432426.1
MAST4


microtubule associated serine/threonine kinase family member 4


chr3_-_11685345 0.011 ENST00000430365.2
VGLL4
vestigial like 4 (Drosophila)
chr14_+_32798462 0.011 ENST00000280979.4
AKAP6
A kinase (PRKA) anchor protein 6
chr9_-_5339873 0.011 ENST00000223862.1
ENST00000223858.4
RLN1

relaxin 1

chr1_+_202317855 0.010 ENST00000356764.2
PPP1R12B
protein phosphatase 1, regulatory subunit 12B
chr12_-_120315074 0.009 ENST00000261833.7
ENST00000392521.2
CIT

citron (rho-interacting, serine/threonine kinase 21)

chr6_-_111927062 0.009 ENST00000359831.4
TRAF3IP2
TRAF3 interacting protein 2
chr20_+_30467600 0.009 ENST00000375934.4
ENST00000375922.4
TTLL9

tubulin tyrosine ligase-like family, member 9

chr2_-_73460334 0.009 ENST00000258083.2
PRADC1
protease-associated domain containing 1
chr1_+_151735431 0.009 ENST00000321531.5
ENST00000315067.8
OAZ3

ornithine decarboxylase antizyme 3

chr4_-_138453606 0.009 ENST00000412923.2
ENST00000344876.4
ENST00000507846.1
ENST00000510305.1
PCDH18



protocadherin 18



chr17_+_74261413 0.009 ENST00000587913.1
UBALD2
UBA-like domain containing 2
chr17_+_74261277 0.008 ENST00000327490.6
UBALD2
UBA-like domain containing 2
chr1_-_151762943 0.008 ENST00000368825.3
ENST00000368823.1
ENST00000458431.2
ENST00000368827.6
ENST00000368824.3
TDRKH




tudor and KH domain containing




chr2_-_89340242 0.008 ENST00000480492.1
IGKV1-12
immunoglobulin kappa variable 1-12
chr9_+_74729511 0.008 ENST00000545168.1
GDA
guanine deaminase
chr6_-_111927449 0.008 ENST00000368761.5
ENST00000392556.4
ENST00000340026.6
TRAF3IP2


TRAF3 interacting protein 2


chr1_+_175036966 0.008 ENST00000239462.4
TNN
tenascin N
chr2_-_98280383 0.007 ENST00000289228.5
ACTR1B
ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
chr8_-_117886563 0.007 ENST00000519837.1
ENST00000522699.1
RAD21

RAD21 homolog (S. pombe)

chr1_-_151762900 0.007 ENST00000440583.2
TDRKH
tudor and KH domain containing
chr12_+_28410128 0.007 ENST00000381259.1
ENST00000381256.1
CCDC91

coiled-coil domain containing 91

chr7_+_134331550 0.007 ENST00000344924.3
ENST00000418040.1
ENST00000393132.2
BPGM


2,3-bisphosphoglycerate mutase


chr15_-_37393406 0.007 ENST00000338564.5
ENST00000558313.1
ENST00000340545.5
MEIS2


Meis homeobox 2


chr2_-_27603582 0.007 ENST00000323703.6
ENST00000436006.1
ZNF513

zinc finger protein 513

chr19_+_41869894 0.007 ENST00000413014.2
TMEM91
transmembrane protein 91
chr12_+_53662073 0.006 ENST00000553219.1
ENST00000257934.4
ESPL1

extra spindle pole bodies homolog 1 (S. cerevisiae)

chr22_+_17956618 0.006 ENST00000262608.8
CECR2
cat eye syndrome chromosome region, candidate 2
chr5_+_140797296 0.006 ENST00000398594.2
PCDHGB7
protocadherin gamma subfamily B, 7
chr4_-_171012844 0.006 ENST00000502392.1
AADAT
aminoadipate aminotransferase
chr20_-_50418972 0.006 ENST00000395997.3
SALL4
spalt-like transcription factor 4
chr15_+_80351910 0.006 ENST00000261749.6
ENST00000561060.1
ZFAND6

zinc finger, AN1-type domain 6

chr3_-_48672859 0.006 ENST00000395550.2
ENST00000455886.2
ENST00000431739.1
ENST00000426599.1
ENST00000383733.3
ENST00000420764.2
ENST00000337000.8
SLC26A6






solute carrier family 26 (anion exchanger), member 6






chr3_+_140396881 0.006 ENST00000286349.3
TRIM42
tripartite motif containing 42
chr12_+_53662110 0.006 ENST00000552462.1
ESPL1
extra spindle pole bodies homolog 1 (S. cerevisiae)
chr16_-_18923035 0.006 ENST00000563836.1
SMG1
SMG1 phosphatidylinositol 3-kinase-related kinase
chr17_-_10372875 0.006 ENST00000255381.2
MYH4
myosin, heavy chain 4, skeletal muscle
chr1_-_94050668 0.005 ENST00000539242.1
BCAR3
breast cancer anti-estrogen resistance 3
chr19_-_10121144 0.005 ENST00000264828.3
COL5A3
collagen, type V, alpha 3
chr8_-_117886612 0.005 ENST00000520992.1
RAD21
RAD21 homolog (S. pombe)
chr10_-_105110831 0.005 ENST00000337211.4
PCGF6
polycomb group ring finger 6
chr19_+_17378159 0.005 ENST00000598188.1
ENST00000359435.4
ENST00000599474.1
ENST00000599057.1
ENST00000601043.1
ENST00000447614.2
BABAM1





BRISC and BRCA1 A complex member 1





chr1_-_197115818 0.005 ENST00000367409.4
ENST00000294732.7
ASPM

asp (abnormal spindle) homolog, microcephaly associated (Drosophila)

chr6_+_160183492 0.005 ENST00000541436.1
ACAT2
acetyl-CoA acetyltransferase 2
chr10_-_105110890 0.005 ENST00000369847.3
PCGF6
polycomb group ring finger 6
chr17_-_12920907 0.005 ENST00000609757.1
ENST00000581499.2
ENST00000580504.1
ELAC2


elaC ribonuclease Z 2


chr19_+_42817527 0.005 ENST00000598766.1
TMEM145
transmembrane protein 145
chr6_-_116866773 0.005 ENST00000368602.3
TRAPPC3L
trafficking protein particle complex 3-like
chr1_-_47779762 0.005 ENST00000371877.3
ENST00000360380.3
ENST00000337817.5
ENST00000447475.2
STIL



SCL/TAL1 interrupting locus



chr2_-_200335983 0.005 ENST00000457245.1
SATB2
SATB homeobox 2
chr11_-_71823266 0.004 ENST00000538919.1
ENST00000539395.1
ENST00000542531.1
ANAPC15


anaphase promoting complex subunit 15


chr11_-_71823796 0.004 ENST00000545680.1
ENST00000543587.1
ENST00000538393.1
ENST00000535234.1
ENST00000227618.4
ENST00000535503.1
ANAPC15





anaphase promoting complex subunit 15





chr11_+_67250490 0.004 ENST00000528641.2
ENST00000279146.3
AIP

aryl hydrocarbon receptor interacting protein

chr10_-_56560939 0.004 ENST00000373955.1
PCDH15
protocadherin-related 15
chr5_+_162864575 0.004 ENST00000512163.1
ENST00000393929.1
ENST00000340828.2
ENST00000511683.2
ENST00000510097.1
ENST00000511490.2
ENST00000510664.1
CCNG1






cyclin G1






chr19_+_17378278 0.004 ENST00000596335.1
ENST00000601436.1
ENST00000595632.1
BABAM1


BRISC and BRCA1 A complex member 1


chr18_+_63273310 0.004 ENST00000579862.1
RP11-775G23.1
RP11-775G23.1
chr19_-_19249255 0.004 ENST00000587583.2
ENST00000450333.2
ENST00000587096.1
ENST00000162044.9
ENST00000592369.1
ENST00000587915.1
TMEM161A





transmembrane protein 161A





chr1_+_81001398 0.004 ENST00000418041.1
ENST00000443104.1
RP5-887A10.1

RP5-887A10.1

chr7_+_100210133 0.004 ENST00000393950.2
ENST00000424091.2
MOSPD3

motile sperm domain containing 3

chr11_+_108535849 0.004 ENST00000526794.1
DDX10
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
chr10_+_99205894 0.004 ENST00000370854.3
ENST00000393760.1
ENST00000414567.1
ENST00000370846.4
ZDHHC16



zinc finger, DHHC-type containing 16



chr7_+_100209979 0.004 ENST00000493970.1
ENST00000379527.2
MOSPD3

motile sperm domain containing 3

chr10_-_99205607 0.003 ENST00000477692.2
ENST00000485122.2
ENST00000370886.5
ENST00000370885.4
ENST00000370902.3
ENST00000370884.5
EXOSC1





exosome component 1





chr11_-_58207646 0.003 ENST00000302572.2
OR5B12
olfactory receptor, family 5, subfamily B, member 12
chrX_+_70752945 0.003 ENST00000373701.3
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase
chr1_+_44115814 0.003 ENST00000372396.3
KDM4A
lysine (K)-specific demethylase 4A
chr20_-_54967187 0.003 ENST00000422322.1
ENST00000371356.2
ENST00000451915.1
ENST00000347343.2
ENST00000395911.1
ENST00000395907.1
ENST00000441357.1
ENST00000456249.1
ENST00000420474.1
ENST00000395909.4
ENST00000395914.1
ENST00000312783.6
ENST00000395915.3
ENST00000395913.3
AURKA













aurora kinase A













chr10_+_99205959 0.003 ENST00000352634.4
ENST00000353979.3
ENST00000370842.2
ENST00000345745.5
ZDHHC16



zinc finger, DHHC-type containing 16



chr7_-_56174161 0.003 ENST00000395422.3
CHCHD2
coiled-coil-helix-coiled-coil-helix domain containing 2
chr7_+_100209725 0.003 ENST00000223054.4
MOSPD3
motile sperm domain containing 3
chr11_-_40315640 0.003 ENST00000278198.2
LRRC4C
leucine rich repeat containing 4C
chrX_+_70752917 0.003 ENST00000373719.3
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase
chr20_+_56964169 0.003 ENST00000475243.1
VAPB
VAMP (vesicle-associated membrane protein)-associated protein B and C
chr1_-_68698197 0.002 ENST00000370973.2
ENST00000370971.1
WLS

wntless Wnt ligand secretion mediator

chr4_-_69536346 0.002 ENST00000338206.5
UGT2B15
UDP glucuronosyltransferase 2 family, polypeptide B15
chr18_+_39535152 0.002 ENST00000262039.4
ENST00000398870.3
ENST00000586545.1
PIK3C3


phosphatidylinositol 3-kinase, catalytic subunit type 3


chr16_+_53133070 0.002 ENST00000565832.1
CHD9
chromodomain helicase DNA binding protein 9
chr17_+_44679808 0.002 ENST00000571172.1
NSF
N-ethylmaleimide-sensitive factor
chr1_-_190446759 0.002 ENST00000367462.3
BRINP3
bone morphogenetic protein/retinoic acid inducible neural-specific 3
chr11_+_108535752 0.002 ENST00000322536.3
DDX10
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
chr4_-_88449771 0.002 ENST00000535835.1
SPARCL1
SPARC-like 1 (hevin)
chr4_-_138453559 0.002 ENST00000511115.1
PCDH18
protocadherin 18
chr20_+_56964253 0.002 ENST00000395802.3
VAPB
VAMP (vesicle-associated membrane protein)-associated protein B and C
chr11_+_17298543 0.001 ENST00000533926.1
NUCB2
nucleobindin 2
chr15_-_51535208 0.001 ENST00000405913.3
ENST00000559878.1
CYP19A1

cytochrome P450, family 19, subfamily A, polypeptide 1

chr4_-_46996424 0.001 ENST00000264318.3
GABRA4
gamma-aminobutyric acid (GABA) A receptor, alpha 4
chr20_-_50419055 0.001 ENST00000217086.4
SALL4
spalt-like transcription factor 4
chr20_+_54967409 0.001 ENST00000415828.1
ENST00000217109.4
ENST00000428552.1
CSTF1


cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa


chr1_-_68698222 0.001 ENST00000370976.3
ENST00000354777.2
ENST00000262348.4
ENST00000540432.1
WLS



wntless Wnt ligand secretion mediator



chr17_-_48785216 0.001 ENST00000285243.6
ANKRD40
ankyrin repeat domain 40
chr7_+_130794846 0.001 ENST00000421797.2
MKLN1
muskelin 1, intracellular mediator containing kelch motifs
chr1_-_151431909 0.001 ENST00000361398.3
ENST00000271715.2
POGZ

pogo transposable element with ZNF domain

chr7_-_100183742 0.001 ENST00000310300.6
LRCH4
leucine-rich repeats and calponin homology (CH) domain containing 4
chr5_+_31532373 0.001 ENST00000325366.9
ENST00000355907.3
ENST00000507818.2
C5orf22


chromosome 5 open reading frame 22


chr18_+_39535239 0.001 ENST00000585528.1
PIK3C3
phosphatidylinositol 3-kinase, catalytic subunit type 3
chr10_+_85954377 0.001 ENST00000332904.3
ENST00000372117.3
CDHR1

cadherin-related family member 1

chr3_+_113251143 0.001 ENST00000264852.4
ENST00000393830.3
SIDT1

SID1 transmembrane family, member 1

chr12_+_54718904 0.001 ENST00000262061.2
ENST00000549043.1
ENST00000552218.1
ENST00000553231.1
ENST00000552362.1
ENST00000455864.2
ENST00000416254.2
ENST00000549116.1
ENST00000551779.1
COPZ1








coatomer protein complex, subunit zeta 1








chr20_+_54967663 0.001 ENST00000452950.1
CSTF1
cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
chr9_+_34646624 0.001 ENST00000450095.2
ENST00000556278.1
GALT
GALT
galactose-1-phosphate uridylyltransferase
Uncharacterized protein
chr7_+_48211048 0.001 ENST00000435803.1
ABCA13
ATP-binding cassette, sub-family A (ABC1), member 13
chr11_+_33061543 0.001 ENST00000432887.1
ENST00000528898.1
ENST00000531632.2
TCP11L1


t-complex 11, testis-specific-like 1


chr16_+_69345243 0.001 ENST00000254950.11
VPS4A
vacuolar protein sorting 4 homolog A (S. cerevisiae)
chr19_-_46088068 0.000 ENST00000263275.4
ENST00000323060.3
OPA3

optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)

chr1_-_151431674 0.000 ENST00000531094.1
POGZ
pogo transposable element with ZNF domain
chrX_+_77154935 0.000 ENST00000481445.1
COX7B
cytochrome c oxidase subunit VIIb
chr1_+_202317815 0.000 ENST00000608999.1
ENST00000336894.4
ENST00000480184.1
PPP1R12B


protein phosphatase 1, regulatory subunit 12B


chr5_-_31532160 0.000 ENST00000511367.2
ENST00000513349.1
DROSHA

drosha, ribonuclease type III

chr1_-_36915880 0.000 ENST00000445843.3
OSCP1
organic solute carrier partner 1
chr11_+_17298522 0.000 ENST00000529313.1
NUCB2
nucleobindin 2
chr10_-_72142345 0.000 ENST00000373224.1
ENST00000446961.1
ENST00000358141.2
ENST00000357631.2
LRRC20



leucine rich repeat containing 20



chr9_+_34646651 0.000 ENST00000378842.3
GALT
galactose-1-phosphate uridylyltransferase
chr19_+_4007644 0.000 ENST00000262971.2
PIAS4
protein inhibitor of activated STAT, 4
chr5_-_31532238 0.000 ENST00000507438.1
DROSHA
drosha, ribonuclease type III
chr11_-_71823715 0.000 ENST00000545944.1
ENST00000502597.2
ANAPC15

anaphase promoting complex subunit 15

chr16_+_58783542 0.000 ENST00000500117.1
ENST00000565722.1
RP11-410D17.2

RP11-410D17.2


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0043397 corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397)