Datasetw6a_vs_wt_vs_wt.w6a_vs_wt.cls
#ago1w6a_versus_ago1gfp.w6a_vs_wt.cls
#ago1w6a_versus_ago1gfp_repos
Phenotypew6a_vs_wt.cls#ago1w6a_versus_ago1gfp_repos
Upregulated in classago1w6a
GeneSetKEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS
Enrichment Score (ES)0.5774322
Normalized Enrichment Score (NES)2.098993
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HLA-DRB1NAHLA-DRB1
Entrez,  Source
major histocompatibility complex, class II, DR beta 184.9600.0354Yes
2HLA-DRANAHLA-DRA
Entrez,  Source
major histocompatibility complex, class II, DR alpha274.8710.0696Yes
3HLA-DPA1NAHLA-DPA1
Entrez,  Source
major histocompatibility complex, class II, DP alpha 11074.4890.0977Yes
4HLA-DRB5NAHLA-DRB5
Entrez,  Source
major histocompatibility complex, class II, DR beta 51374.3390.1274Yes
5HLA-DMBNAHLA-DMB
Entrez,  Source
major histocompatibility complex, class II, DM beta1644.2590.1568Yes
6HLA-DRB3NAHLA-DRB3
Entrez,  Source
major histocompatibility complex, class II, DR beta 32264.0180.1824Yes
7HLA-DRB4NAHLA-DRB4
Entrez,  Source
major histocompatibility complex, class II, DR beta 42423.9630.2102Yes
8C2NAC2
Entrez,  Source
complement component 22713.8330.2364Yes
9HLA-DMANAHLA-DMA
Entrez,  Source
major histocompatibility complex, class II, DM alpha2943.7470.2623Yes
10HIST1H2ACNAHIST1H2AC
Entrez,  Source
histone cluster 1, H2ac3223.6880.2874Yes
11HIST1H2BDNAHIST1H2BD
Entrez,  Source
histone cluster 1, H2bd3853.4660.3090Yes
12HIST1H2BJNAHIST1H2BJ
Entrez,  Source
histone cluster 1, H2bj3993.4360.3331Yes
13HLA-DQB1NAHLA-DQB1
Entrez,  Source
major histocompatibility complex, class II, DQ beta 14383.3530.3553Yes
14HIST1H2BKNAHIST1H2BK
Entrez,  Source
histone cluster 1, H2bk5183.1400.3736Yes
15HIST1H4HNAHIST1H4H
Entrez,  Source
histone cluster 1, H4h5203.1360.3962Yes
16HIST2H2AA3NAHIST2H2AA3
Entrez,  Source
histone cluster 2, H2aa35962.9540.4133Yes
17HIST1H3HNAHIST1H3H
Entrez,  Source
histone cluster 1, H3h6332.8910.4322Yes
18C1RNAC1R
Entrez,  Source
complement component 1, r subcomponent6942.7340.4486Yes
19HIST1H3CNAHIST1H3C
Entrez,  Source
histone cluster 1, H3c8502.4770.4579Yes
20HIST1H3BNAHIST1H3B
Entrez,  Source
histone cluster 1, H3b8662.4540.4748Yes
21FCGR3BNAFCGR3B
Entrez,  Source
Fc fragment of IgG, low affinity IIIb, receptor (CD16b)9012.4070.4903Yes
22HIST1H2AMNAHIST1H2AM
Entrez,  Source
histone cluster 1, H2am9922.2950.5019Yes
23HIST2H2BENAHIST2H2BE
Entrez,  Source
histone cluster 2, H2be10482.2310.5149Yes
24HLA-DPB1NAHLA-DPB1
Entrez,  Source
major histocompatibility complex, class II, DP beta 111272.1420.5260Yes
25HLA-DOBNAHLA-DOB
Entrez,  Source
major histocompatibility complex, class II, DO beta14601.7970.5204Yes
26HIST1H2BCNAHIST1H2BC
Entrez,  Source
histone cluster 1, H2bc15551.7190.5276Yes
27HLA-DOANAHLA-DOA
Entrez,  Source
major histocompatibility complex, class II, DO alpha16601.6400.5337Yes
28HIST1H2AHNAHIST1H2AH
Entrez,  Source
histone cluster 1, H2ah16891.6130.5438Yes
29HIST1H2BNNAHIST1H2BN
Entrez,  Source
histone cluster 1, H2bn17931.5340.5491Yes
30HIST1H2AENAHIST1H2AE
Entrez,  Source
histone cluster 1, H2ae19351.4540.5517Yes
31HIST1H3ANAHIST1H3A
Entrez,  Source
histone cluster 1, H3a19421.4500.5618Yes
32HIST2H4BNAHIST2H4B
Entrez,  Source
histone cluster 2, H4b22791.2640.5522Yes
33C4BNAC4B
Entrez,  Source
complement component 4B (Childo blood group)23831.2220.5553Yes
34HIST2H2BFNAHIST2H2BF
Entrez,  Source
histone cluster 2, H2bf24081.2120.5627Yes
35HIST1H4CNAHIST1H4C
Entrez,  Source
histone cluster 1, H4c24371.1980.5698Yes
36HIST1H4BNAHIST1H4B
Entrez,  Source
histone cluster 1, H4b25251.1690.5734Yes
37C4ANAC4A
Entrez,  Source
complement component 4A (Rodgers blood group)26001.1370.5774Yes
38HIST2H3DNAHIST2H3D
Entrez,  Source
histone cluster 2, H3d27691.0700.5758No
39H2AFY2NAH2AFY2
Entrez,  Source
H2A histone family, member Y233510.8960.5497No
40HIST1H2ABNAHIST1H2AB
Entrez,  Source
histone cluster 1, H2ab35940.8430.5423No
41C1SNAC1S
Entrez,  Source
complement component 1, s subcomponent38470.8000.5340No
42FCGR2ANAFCGR2A
Entrez,  Source
Fc fragment of IgG, low affinity IIa, receptor (CD32)38990.7850.5368No
43HIST1H2BONAHIST1H2BO
Entrez,  Source
histone cluster 1, H2bo40050.7610.5364No
44FCGR3ANAFCGR3A
Entrez,  Source
Fc fragment of IgG, low affinity IIIa, receptor (CD16a)40450.7510.5396No
45HIST1H2AGNAHIST1H2AG
Entrez,  Source
histone cluster 1, H2ag46170.6340.5123No
46HIST1H2AJNAHIST1H2AJ
Entrez,  Source
histone cluster 1, H2aj46340.6320.5159No
47HIST1H2AKNAHIST1H2AK
Entrez,  Source
histone cluster 1, H2ak47930.5970.5114No
48SSBNASSB
Entrez,  Source
Sjogren syndrome antigen B (autoantigen La)49290.5720.5080No
49H2AFJNAH2AFJ
Entrez,  Source
H2A histone family, member J49880.5600.5088No
50HIST1H2BMNAHIST1H2BM
Entrez,  Source
histone cluster 1, H2bm52310.5120.4990No
51HIST1H2BENAHIST1H2BE
Entrez,  Source
histone cluster 1, H2be54330.4850.4912No
52H2AFB2NAH2AFB2
Entrez,  Source
H2A histone family, member B258880.4280.4689No
53HIST1H3INAHIST1H3I
Entrez,  Source
histone cluster 1, H3i59680.4180.4675No
54HIST3H3NAHIST3H3
Entrez,  Source
histone cluster 3, H360460.4180.4662No
55HIST1H4KNAHIST1H4K
Entrez,  Source
histone cluster 1, H4k61000.4150.4662No
56HLA-DQA1NAHLA-DQA1
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 161160.4150.4684No
57HIST3H2BBNAHIST3H2BB
Entrez,  Source
histone cluster 3, H2bb61880.4150.4674No
58HIST1H2BLNAHIST1H2BL
Entrez,  Source
histone cluster 1, H2bl65480.3590.4499No
59HIST1H2AINAHIST1H2AI
Entrez,  Source
histone cluster 1, H2ai68310.3170.4364No
60H2AFYNAH2AFY
Entrez,  Source
H2A histone family, member Y70240.2860.4278No
61H2AFVNAH2AFV
Entrez,  Source
H2A histone family, member V72970.2420.4143No
62C6NAC6
Entrez,  Source
complement component 673180.2390.4149No
63HIST2H2ACNAHIST2H2AC
Entrez,  Source
histone cluster 2, H2ac74060.2240.4116No
64TRIM21NATRIM21
Entrez,  Source
tripartite motif-containing 2179410.1520.3828No
65TROVE2NATROVE2
Entrez,  Source
TROVE domain family, member 281020.1330.3748No
66ACTN4NAACTN4
Entrez,  Source
actinin, alpha 481210.1310.3748No
67HIST1H2BGNAHIST1H2BG
Entrez,  Source
histone cluster 1, H2bg81420.1280.3746No
68C9NAC9
Entrez,  Source
complement component 981680.1250.3741No
69GRIN2BNAGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B83380.1020.3654No
70IL10NAIL10
Entrez,  Source
interleukin 1086290.0620.3496No
71HIST1H3FNAHIST1H3F
Entrez,  Source
histone cluster 1, H3f92010.0000.3176No
72HIST1H3DNAHIST1H3D
Entrez,  Source
histone cluster 1, H3d92020.0000.3176No
73HIST1H2BINAHIST1H2BI
Entrez,  Source
histone cluster 1, H2bi93030.0000.3120No
74H2AFZNAH2AFZ
Entrez,  Source
H2A histone family, member Z9425-0.0030.3053No
75C8ANAC8A
Entrez,  Source
complement component 8, alpha polypeptide9500-0.0140.3012No
76C7NAC7
Entrez,  Source
complement component 79558-0.0240.2982No
77HIST1H2BBNAHIST1H2BB
Entrez,  Source
histone cluster 1, H2bb9702-0.0430.2905No
78H2AFXNAH2AFX
Entrez,  Source
H2A histone family, member X9779-0.0490.2866No
79FCGR1ANAFCGR1A
Entrez,  Source
Fc fragment of IgG, high affinity Ia, receptor (CD64)9795-0.0510.2861No
80TNFNATNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)9956-0.0660.2777No
81SNRPBNASNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B110268-0.0940.2609No
82CD80NACD80
Entrez,  Source
CD80 molecule10403-0.1110.2542No
83CD86NACD86
Entrez,  Source
CD86 molecule10856-0.1770.2302No
84HIST1H4ANAHIST1H4A
Entrez,  Source
histone cluster 1, H4a11201-0.2270.2126No
85HIST1H3JNAHIST1H3J
Entrez,  Source
histone cluster 1, H3j11280-0.2360.2099No
86HLA-DQA2NAHLA-DQA2
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 211354-0.2470.2076No
87C8GNAC8G
Entrez,  Source
complement component 8, gamma polypeptide11727-0.3000.1890No
88HIST2H3ANAHIST2H3A
Entrez,  Source
histone cluster 2, H3a11878-0.3260.1829No
89HIST2H2ABNAHIST2H2AB
Entrez,  Source
histone cluster 2, H2ab11902-0.3270.1840No
90H3F3CNA11963-0.3340.1831No
91HIST4H4NAHIST4H4
Entrez,  Source
histone cluster 4, H412404-0.4000.1613No
92HIST1H4INAHIST1H4I
Entrez,  Source
histone cluster 1, H4i12471-0.4110.1606No
93HIST1H4JNAHIST1H4J
Entrez,  Source
histone cluster 1, H4j12472-0.4110.1636No
94CD40LGNACD40LG
Entrez,  Source
CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome)12489-0.4110.1657No
95H2BFMNAH2BFM
Entrez,  Source
H2B histone family, member M12679-0.4310.1582No
96IFNGNAIFNG
Entrez,  Source
interferon, gamma12804-0.4450.1545No
97ACTN1NAACTN1
Entrez,  Source
actinin, alpha 112856-0.4450.1548No
98GRIN2ANAGRIN2A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2A13568-0.5510.1190No
99SNRPD1NASNRPD1
Entrez,  Source
small nuclear ribonucleoprotein D1 polypeptide 16kDa13588-0.5550.1220No
100C8BNAC8B
Entrez,  Source
complement component 8, beta polypeptide13690-0.5740.1205No
101H2BFWTNAH2BFWT
Entrez,  Source
H2B histone family, member W, testis-specific13933-0.6210.1114No
102FCGR2BNAFCGR2B
Entrez,  Source
Fc fragment of IgG, low affinity IIb, receptor (CD32)14756-0.8150.0713No
103H3F3BNAH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)15031-0.8750.0623No
104SNRPD3NASNRPD3
Entrez,  Source
small nuclear ribonucleoprotein D3 polypeptide 18kDa15138-0.8980.0628No
105H3F3ANAH3F3A
Entrez,  Source
H3 histone, family 3A15430-0.9770.0536No
106ACTN2NAACTN2
Entrez,  Source
actinin, alpha 215457-0.9860.0593No
107CTSGNACTSG
Entrez,  Source
cathepsin G15787-1.0910.0487No
108ACTN3NAACTN3
Entrez,  Source
actinin, alpha 316502-1.4140.0190No
109C5NAC5
Entrez,  Source
complement component 516535-1.4310.0276No
110CD28NACD28
Entrez,  Source
CD28 molecule17036-1.8020.0126No
111CD40NACD40
Entrez,  Source
CD40 molecule, TNF receptor superfamily member 517453-2.4140.0068No
112C3NAC3
Entrez,  Source
complement component 317698-3.0890.0155No
Table: GSEA details [plain text format]



Fig 2: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS: Random ES distribution   
Gene set null distribution of ES for KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS