Datasetw6a_vs_wt_vs_wt.w6a_vs_wt.cls
#ago1w6a_versus_ago1gfp.w6a_vs_wt.cls
#ago1w6a_versus_ago1gfp_repos
Phenotypew6a_vs_wt.cls#ago1w6a_versus_ago1gfp_repos
Upregulated in classago1w6a
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)0.64841557
Normalized Enrichment Score (NES)2.329605
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1BST2NABST2
Entrez,  Source
bone marrow stromal cell antigen 224.9810.0327Yes
2CD74NACD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain54.9730.0653Yes
3CSF1NACSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)1094.4870.0890Yes
4SELLNASELL
Entrez,  Source
selectin L (lymphocyte adhesion molecule 1)1464.3090.1154Yes
5OASLNAOASL
Entrez,  Source
2'-5'-oligoadenylate synthetase-like1504.2970.1435Yes
6IFIT2NAIFIT2
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 22054.1130.1675Yes
7RSAD2NARSAD2
Entrez,  Source
radical S-adenosyl methionine domain containing 22363.9920.1921Yes
8GMPRNAGMPR
Entrez,  Source
guanosine monophosphate reductase2513.9050.2170Yes
9SAMD9LNASAMD9L
Entrez,  Source
sterile alpha motif domain containing 9-like2813.7820.2403Yes
10LAMP3NALAMP3
Entrez,  Source
lysosomal-associated membrane protein 32983.7380.2640Yes
11CASP1NACASP1
Entrez,  Source
caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)3023.7320.2883Yes
12ISG15NAISG15
Entrez,  Source
ISG15 ubiquitin-like modifier3263.6830.3113Yes
13IFIT3NAIFIT3
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 33293.6680.3353Yes
14RTP4NARTP4
Entrez,  Source
receptor transporter protein 43923.4500.3545Yes
15IFIH1NAIFIH1
Entrez,  Source
interferon induced with helicase C domain 14133.4040.3758Yes
16OAS1NAOAS1
Entrez,  Source
2',5'-oligoadenylate synthetase 1, 40/46kDa4203.3850.3977Yes
17GBP2NAGBP2
Entrez,  Source
guanylate binding protein 2, interferon-inducible4363.3560.4190Yes
18IFI44LNAIFI44L
Entrez,  Source
interferon-induced protein 44-like4903.2310.4373Yes
19MX1NAMX1
Entrez,  Source
myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)5423.0910.4548Yes
20DDX60NA5882.9680.4718Yes
21SAMD9NASAMD9
Entrez,  Source
sterile alpha motif domain containing 95902.9630.4912Yes
22CCRL2NACCRL2
Entrez,  Source
chemokine (C-C motif) receptor-like 26112.9250.5093Yes
23IFI44NAIFI44
Entrez,  Source
interferon-induced protein 446382.8820.5268Yes
24DHX58NA7402.6510.5386Yes
25IFITM1NAIFITM1
Entrez,  Source
interferon induced transmembrane protein 1 (9-27)7482.6390.5556Yes
26HERC6NAHERC6
Entrez,  Source
hect domain and RLD 67962.5500.5697Yes
27GBP4NAGBP4
Entrez,  Source
guanylate binding protein 48742.4410.5815Yes
28USP18NAUSP18
Entrez,  Source
ubiquitin specific peptidase 189172.3970.5949Yes
29IRF7NAIRF7
Entrez,  Source
interferon regulatory factor 710582.2150.6017Yes
30CXCL11NACXCL11
Entrez,  Source
chemokine (C-X-C motif) ligand 1111802.0560.6084Yes
31CMPK2NA12871.9430.6153Yes
32FAM46ANAFAM46A
Entrez,  Source
family with sequence similarity 46, member A13471.8870.6244Yes
33UBE2L6NAUBE2L6
Entrez,  Source
ubiquitin-conjugating enzyme E2L 614121.8340.6329Yes
34NCOA7NANCOA7
Entrez,  Source
nuclear receptor coactivator 714191.8270.6446Yes
35CXCL10NACXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 1016721.6340.6412Yes
36SP110NASP110
Entrez,  Source
SP110 nuclear body protein17681.5450.6461Yes
37TRIM26NATRIM26
Entrez,  Source
tripartite motif-containing 2619071.4680.6480Yes
38STAT2NASTAT2
Entrez,  Source
signal transducer and activator of transcription 2, 113kDa24121.2110.6278Yes
39IRF1NAIRF1
Entrez,  Source
interferon regulatory factor 124391.1970.6342Yes
40EIF2AK2NAEIF2AK2
Entrez,  Source
eukaryotic translation initiation factor 2-alpha kinase 224731.1870.6402Yes
41MOV10NAMOV10
Entrez,  Source
Mov10, Moloney leukemia virus 10, homolog (mouse)27381.0850.6325Yes
42PSME1NAPSME1
Entrez,  Source
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)27431.0820.6394Yes
43WARSNAWARS
Entrez,  Source
tryptophanyl-tRNA synthetase27851.0650.6442Yes
44PARP12NAPARP12
Entrez,  Source
poly (ADP-ribose) polymerase family, member 1228631.0410.6467Yes
45IL7NAIL7
Entrez,  Source
interleukin 730590.9730.6422Yes
46RNF31NARNF31
Entrez,  Source
ring finger protein 3130630.9710.6484Yes
47IRF9NA32330.9320.6451No
48NUB1NANUB1
Entrez,  Source
negative regulator of ubiquitin-like proteins 134780.8630.6371No
49CNPNACNP
Entrez,  Source
2',3'-cyclic nucleotide 3' phosphodiesterase34880.8600.6423No
50C1SNAC1S
Entrez,  Source
complement component 1, s subcomponent38470.8000.6275No
51PSME2NAPSME2
Entrez,  Source
proteasome (prosome, macropain) activator subunit 2 (PA28 beta)40950.7410.6186No
52CD47NACD47
Entrez,  Source
CD47 molecule42700.7080.6135No
53HLA-CNAHLA-C
Entrez,  Source
major histocompatibility complex, class I, C43380.6930.6143No
54LGALS3BPNALGALS3BP
Entrez,  Source
lectin, galactoside-binding, soluble, 3 binding protein43880.6810.6161No
55TRIM25NATRIM25
Entrez,  Source
tripartite motif-containing 2546680.6250.6046No
56LAP3NALAP3
Entrez,  Source
leucine aminopeptidase 347520.6060.6039No
57LPAR6NA48060.5930.6049No
58ISG20NAISG20
Entrez,  Source
interferon stimulated exonuclease gene 20kDa48780.5810.6047No
59TAP1NATAP1
Entrez,  Source
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)49610.5660.6038No
60CASP8NACASP8
Entrez,  Source
caspase 8, apoptosis-related cysteine peptidase52700.5050.5899No
61TXNIPNATXNIP
Entrez,  Source
thioredoxin interacting protein63360.3920.5330No
62TDRD7NATDRD7
Entrez,  Source
tudor domain containing 763450.3910.5351No
63TRAFD1NATRAFD1
Entrez,  Source
TRAF-type zinc finger domain containing 163820.3840.5356No
64EPSTI1NAEPSTI1
Entrez,  Source
epithelial stromal interaction 1 (breast)73370.2360.4838No
65TRIM5NATRIM5
Entrez,  Source
tripartite motif-containing 574340.2210.4799No
66PSMA3NAPSMA3
Entrez,  Source
proteasome (prosome, macropain) subunit, alpha type, 374940.2110.4780No
67TRIM21NATRIM21
Entrez,  Source
tripartite motif-containing 2179410.1520.4540No
68IFI35NAIFI35
Entrez,  Source
interferon-induced protein 3580010.1460.4517No
69IFI30NAIFI30
Entrez,  Source
interferon, gamma-inducible protein 3082400.1150.4391No
70TMEM140NATMEM140
Entrez,  Source
transmembrane protein 14084420.0870.4285No
71PARP14NAPARP14
Entrez,  Source
poly (ADP-ribose) polymerase family, member 1485270.0770.4243No
72NMINANMI
Entrez,  Source
N-myc (and STAT) interactor87540.0440.4119No
73OGFRNAOGFR
Entrez,  Source
opioid growth factor receptor9452-0.0070.3730No
74TRIM14NATRIM14
Entrez,  Source
tripartite motif-containing 149682-0.0410.3604No
75UBA7NA9692-0.0420.3602No
76ADARNAADAR
Entrez,  Source
adenosine deaminase, RNA-specific10155-0.0830.3349No
77PROCRNAPROCR
Entrez,  Source
protein C receptor, endothelial (EPCR)10414-0.1120.3212No
78B2MNAB2M
Entrez,  Source
beta-2-microglobulin11181-0.2240.2799No
79PSMB9NAPSMB9
Entrez,  Source
proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)12068-0.3490.2326No
80RIPK2NARIPK2
Entrez,  Source
receptor-interacting serine-threonine kinase 212241-0.3740.2254No
81SLC25A28NASLC25A28
Entrez,  Source
solute carrier family 25, member 2812452-0.4100.2164No
82IL15NAIL15
Entrez,  Source
interleukin 1512600-0.4160.2109No
83IRF2NAIRF2
Entrez,  Source
interferon regulatory factor 212738-0.4410.2062No
84IL4RNAIL4R
Entrez,  Source
interleukin 4 receptor13336-0.5080.1761No
85PARP9NAPARP9
Entrez,  Source
poly (ADP-ribose) polymerase family, member 913586-0.5550.1658No
86PSMB8NAPSMB8
Entrez,  Source
proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7)14537-0.7630.1177No
87PLSCR1NAPLSCR1
Entrez,  Source
phospholipid scramblase 115338-0.9510.0792No
88PNPT1NAPNPT1
Entrez,  Source
polyribonucleotide nucleotidyltransferase 115478-0.9920.0780No
89IFI27NAIFI27
Entrez,  Source
interferon, alpha-inducible protein 2715560-1.0150.0801No
90ELF1NAELF1
Entrez,  Source
E74-like factor 1 (ets domain transcription factor)15757-1.0810.0763No
91LY6ENALY6E
Entrez,  Source
lymphocyte antigen 6 complex, locus E16427-1.3760.0479No
92BATF2NABATF2
Entrez,  Source
basic leucine zipper transcription factor, ATF-like 216653-1.5020.0452No
93IFITM3NAIFITM3
Entrez,  Source
interferon induced transmembrane protein 3 (1-8U)16936-1.7090.0407No
94IFITM2NAIFITM2
Entrez,  Source
interferon induced transmembrane protein 2 (1-8D)17569-2.6280.0226No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE