Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1w1a
GeneSetKEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS
Enrichment Score (ES)0.4251459
Normalized Enrichment Score (NES)1.4474881
Nominal p-value0.008588957
FDR q-value0.21369737
FWER p-Value0.968
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HLA-DRANAHLA-DRA
Entrez,  Source
major histocompatibility complex, class II, DR alpha834.5820.0380Yes
2HLA-DRB1NAHLA-DRB1
Entrez,  Source
major histocompatibility complex, class II, DR beta 12353.9690.0665Yes
3HLA-DPA1NAHLA-DPA1
Entrez,  Source
major histocompatibility complex, class II, DP alpha 13453.5980.0939Yes
4HIST1H2ACNAHIST1H2AC
Entrez,  Source
histone cluster 1, H2ac3493.5930.1272Yes
5HIST1H2BDNAHIST1H2BD
Entrez,  Source
histone cluster 1, H2bd4123.4290.1556Yes
6HIST2H2AA3NAHIST2H2AA3
Entrez,  Source
histone cluster 2, H2aa35183.1060.1787Yes
7HIST1H2BJNAHIST1H2BJ
Entrez,  Source
histone cluster 1, H2bj5503.0370.2052Yes
8HLA-DMANAHLA-DMA
Entrez,  Source
major histocompatibility complex, class II, DM alpha5563.0300.2331Yes
9HLA-DRB5NAHLA-DRB5
Entrez,  Source
major histocompatibility complex, class II, DR beta 56112.8980.2571Yes
10HIST1H2BKNAHIST1H2BK
Entrez,  Source
histone cluster 1, H2bk6152.8900.2838Yes
11HIST1H4HNAHIST1H4H
Entrez,  Source
histone cluster 1, H4h6762.7990.3065Yes
12HIST1H2BNNAHIST1H2BN
Entrez,  Source
histone cluster 1, H2bn7452.6560.3274Yes
13HIST1H2BCNAHIST1H2BC
Entrez,  Source
histone cluster 1, H2bc8742.4850.3434Yes
14HIST2H2BENAHIST2H2BE
Entrez,  Source
histone cluster 2, H2be8962.4600.3651Yes
15HLA-DRB3NAHLA-DRB3
Entrez,  Source
major histocompatibility complex, class II, DR beta 39162.4380.3868Yes
16HLA-DMBNAHLA-DMB
Entrez,  Source
major histocompatibility complex, class II, DM beta11072.2150.3967Yes
17HLA-DRB4NAHLA-DRB4
Entrez,  Source
major histocompatibility complex, class II, DR beta 413212.0230.4036Yes
18HLA-DOBNAHLA-DOB
Entrez,  Source
major histocompatibility complex, class II, DO beta14771.8920.4126Yes
19C2NAC2
Entrez,  Source
complement component 215591.8360.4251Yes
20HIST1H2ABNAHIST1H2AB
Entrez,  Source
histone cluster 1, H2ab26131.2760.3781No
21SSBNASSB
Entrez,  Source
Sjogren syndrome antigen B (autoantigen La)29641.1600.3693No
22HIST1H3ANAHIST1H3A
Entrez,  Source
histone cluster 1, H3a32341.0790.3643No
23HIST2H4BNAHIST2H4B
Entrez,  Source
histone cluster 2, H4b32731.0680.3721No
24HIST1H3BNAHIST1H3B
Entrez,  Source
histone cluster 1, H3b33241.0490.3791No
25HIST1H2AMNAHIST1H2AM
Entrez,  Source
histone cluster 1, H2am33761.0350.3859No
26HIST1H2AJNAHIST1H2AJ
Entrez,  Source
histone cluster 1, H2aj34441.0170.3916No
27HIST2H2BFNAHIST2H2BF
Entrez,  Source
histone cluster 2, H2bf35000.9990.3978No
28HIST1H3HNAHIST1H3H
Entrez,  Source
histone cluster 1, H3h36900.9440.3960No
29C1RNAC1R
Entrez,  Source
complement component 1, r subcomponent37740.9220.4000No
30FCGR2ANAFCGR2A
Entrez,  Source
Fc fragment of IgG, low affinity IIa, receptor (CD32)38460.9060.4044No
31HIST1H2BLNAHIST1H2BL
Entrez,  Source
histone cluster 1, H2bl39970.8680.4041No
32HIST1H2AKNAHIST1H2AK
Entrez,  Source
histone cluster 1, H2ak42290.8090.3987No
33HIST1H4BNAHIST1H4B
Entrez,  Source
histone cluster 1, H4b44050.7720.3961No
34HIST1H2AGNAHIST1H2AG
Entrez,  Source
histone cluster 1, H2ag45830.7300.3930No
35HIST1H4CNAHIST1H4C
Entrez,  Source
histone cluster 1, H4c46960.7040.3933No
36H2AFYNAH2AFY
Entrez,  Source
H2A histone family, member Y47080.7010.3992No
37H2AFJNAH2AFJ
Entrez,  Source
H2A histone family, member J49340.6540.3927No
38HIST1H3CNAHIST1H3C
Entrez,  Source
histone cluster 1, H3c50700.6290.3910No
39HLA-DPB1NAHLA-DPB1
Entrez,  Source
major histocompatibility complex, class II, DP beta 151590.6120.3918No
40FCGR1ANAFCGR1A
Entrez,  Source
Fc fragment of IgG, high affinity Ia, receptor (CD64)52310.5990.3934No
41HIST3H3NAHIST3H3
Entrez,  Source
histone cluster 3, H357050.5150.3717No
42HIST2H2ACNAHIST2H2AC
Entrez,  Source
histone cluster 2, H2ac58060.4990.3707No
43TRIM21NATRIM21
Entrez,  Source
tripartite motif-containing 2159100.4850.3695No
44CD80NACD80
Entrez,  Source
CD80 molecule60650.4570.3651No
45H2AFZNAH2AFZ
Entrez,  Source
H2A histone family, member Z61240.4450.3660No
46HIST1H2AENAHIST1H2AE
Entrez,  Source
histone cluster 1, H2ae61720.4350.3674No
47HIST1H4INAHIST1H4I
Entrez,  Source
histone cluster 1, H4i65240.3820.3513No
48HIST1H2BENAHIST1H2BE
Entrez,  Source
histone cluster 1, H2be66300.3680.3489No
49HIST1H2AINAHIST1H2AI
Entrez,  Source
histone cluster 1, H2ai66530.3640.3510No
50HIST1H2BONAHIST1H2BO
Entrez,  Source
histone cluster 1, H2bo66810.3600.3529No
51SNRPBNASNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B168550.3350.3463No
52H2AFY2NAH2AFY2
Entrez,  Source
H2A histone family, member Y269390.3240.3447No
53HIST1H4KNAHIST1H4K
Entrez,  Source
histone cluster 1, H4k70580.3090.3410No
54HLA-DQB1NAHLA-DQB1
Entrez,  Source
major histocompatibility complex, class II, DQ beta 171330.2970.3396No
55ACTN4NAACTN4
Entrez,  Source
actinin, alpha 472820.2760.3339No
56HIST1H2BINAHIST1H2BI
Entrez,  Source
histone cluster 1, H2bi73390.2690.3332No
57HIST1H3FNAHIST1H3F
Entrez,  Source
histone cluster 1, H3f73750.2640.3337No
58CD40LGNACD40LG
Entrez,  Source
CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome)76090.2420.3229No
59HIST2H3DNAHIST2H3D
Entrez,  Source
histone cluster 2, H3d77220.2320.3188No
60HLA-DQA1NAHLA-DQA1
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 177240.2320.3209No
61C4BNAC4B
Entrez,  Source
complement component 4B (Childo blood group)78630.2180.3153No
62C8ANAC8A
Entrez,  Source
complement component 8, alpha polypeptide78780.2160.3165No
63HIST1H4ANAHIST1H4A
Entrez,  Source
histone cluster 1, H4a80110.2010.3110No
64HIST1H3DNAHIST1H3D
Entrez,  Source
histone cluster 1, H3d82520.1730.2991No
65HIST1H2AHNAHIST1H2AH
Entrez,  Source
histone cluster 1, H2ah83610.1640.2946No
66HLA-DOANAHLA-DOA
Entrez,  Source
major histocompatibility complex, class II, DO alpha83780.1640.2953No
67C8BNAC8B
Entrez,  Source
complement component 8, beta polypeptide84000.1620.2956No
68TROVE2NATROVE2
Entrez,  Source
TROVE domain family, member 285940.1430.2861No
69C9NAC9
Entrez,  Source
complement component 986040.1430.2869No
70H2AFVNAH2AFV
Entrez,  Source
H2A histone family, member V87430.1280.2804No
71C7NAC7
Entrez,  Source
complement component 787610.1250.2806No
72HIST1H2BBNAHIST1H2BB
Entrez,  Source
histone cluster 1, H2bb91500.0840.2597No
73C4ANAC4A
Entrez,  Source
complement component 4A (Rodgers blood group)92770.0730.2533No
74C6NAC6
Entrez,  Source
complement component 693280.0670.2511No
75IL10NAIL10
Entrez,  Source
interleukin 1098030.0100.2247No
76HIST1H3INAHIST1H3I
Entrez,  Source
histone cluster 1, H3i98980.0000.2195No
77FCGR3ANAFCGR3A
Entrez,  Source
Fc fragment of IgG, low affinity IIIa, receptor (CD16a)99190.0000.2183No
78FCGR3BNAFCGR3B
Entrez,  Source
Fc fragment of IgG, low affinity IIIb, receptor (CD16b)99200.0000.2183No
79HIST1H2BMNAHIST1H2BM
Entrez,  Source
histone cluster 1, H2bm100310.0000.2122No
80H2AFB2NAH2AFB2
Entrez,  Source
H2A histone family, member B2100970.0000.2085No
81HIST3H2BBNAHIST3H2BB
Entrez,  Source
histone cluster 3, H2bb101250.0000.2070No
82HLA-DQA2NAHLA-DQA2
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 210636-0.0450.1789No
83GRIN2BNAGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B10737-0.0540.1738No
84C8GNAC8G
Entrez,  Source
complement component 8, gamma polypeptide10761-0.0540.1730No
85H2AFXNAH2AFX
Entrez,  Source
H2A histone family, member X10835-0.0620.1695No
86H3F3CNA11009-0.0820.1606No
87C5NAC5
Entrez,  Source
complement component 511052-0.0860.1591No
88CD86NACD86
Entrez,  Source
CD86 molecule11217-0.1060.1509No
89IFNGNAIFNG
Entrez,  Source
interferon, gamma11661-0.1500.1275No
90HIST1H3JNAHIST1H3J
Entrez,  Source
histone cluster 1, H3j11900-0.1800.1158No
91FCGR2BNAFCGR2B
Entrez,  Source
Fc fragment of IgG, low affinity IIb, receptor (CD32)11980-0.1880.1132No
92HIST2H2ABNAHIST2H2AB
Entrez,  Source
histone cluster 2, H2ab12531-0.2560.0848No
93TNFNATNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)12645-0.2690.0809No
94HIST1H4JNAHIST1H4J
Entrez,  Source
histone cluster 1, H4j12652-0.2700.0831No
95HIST1H2BGNAHIST1H2BG
Entrez,  Source
histone cluster 1, H2bg12735-0.2820.0812No
96HIST4H4NAHIST4H4
Entrez,  Source
histone cluster 4, H412968-0.3140.0711No
97H2BFWTNAH2BFWT
Entrez,  Source
H2B histone family, member W, testis-specific14371-0.567-0.0021No
98SNRPD1NASNRPD1
Entrez,  Source
small nuclear ribonucleoprotein D1 polypeptide 16kDa14580-0.613-0.0080No
99SNRPD3NASNRPD3
Entrez,  Source
small nuclear ribonucleoprotein D3 polypeptide 18kDa14717-0.647-0.0096No
100H2BFMNAH2BFM
Entrez,  Source
H2B histone family, member M14887-0.692-0.0126No
101H3F3BNAH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)15097-0.746-0.0174No
102ACTN3NAACTN3
Entrez,  Source
actinin, alpha 315102-0.747-0.0106No
103GRIN2ANAGRIN2A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2A15409-0.837-0.0200No
104H3F3ANAH3F3A
Entrez,  Source
H3 histone, family 3A15500-0.862-0.0170No
105HIST2H3ANAHIST2H3A
Entrez,  Source
histone cluster 2, H3a15503-0.863-0.0091No
106CTSGNACTSG
Entrez,  Source
cathepsin G15560-0.884-0.0040No
107CD28NACD28
Entrez,  Source
CD28 molecule16374-1.233-0.0380No
108ACTN1NAACTN1
Entrez,  Source
actinin, alpha 116729-1.453-0.0443No
109ACTN2NAACTN2
Entrez,  Source
actinin, alpha 217447-2.317-0.0628No
110C1SNAC1S
Entrez,  Source
complement component 1, s subcomponent17464-2.349-0.0419No
111CD40NACD40
Entrez,  Source
CD40 molecule, TNF receptor superfamily member 517681-3.081-0.0253No
112C3NAC3
Entrez,  Source
complement component 317907-4.5050.0041No
Table: GSEA details [plain text format]



Fig 2: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS: Random ES distribution   
Gene set null distribution of ES for KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS