Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1w1a
GeneSetHALLMARK_INTERFERON_ALPHA_RESPONSE
Enrichment Score (ES)0.5651078
Normalized Enrichment Score (NES)1.8582567
Nominal p-value0.0
FDR q-value4.318182E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CD74NACD74
Entrez,  Source
CD74 molecule, major histocompatibility complex, class II invariant chain34.9610.0318Yes
2BST2NABST2
Entrez,  Source
bone marrow stromal cell antigen 2294.8450.0617Yes
3CSF1NACSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)884.5560.0878Yes
4IFIT2NAIFIT2
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 21184.4410.1149Yes
5OASLNAOASL
Entrez,  Source
2'-5'-oligoadenylate synthetase-like1944.1250.1373Yes
6IFIT3NAIFIT3
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 32164.0350.1622Yes
7GMPRNAGMPR
Entrez,  Source
guanosine monophosphate reductase2593.8730.1848Yes
8ISG15NAISG15
Entrez,  Source
ISG15 ubiquitin-like modifier2663.8560.2093Yes
9IFIH1NAIFIH1
Entrez,  Source
interferon induced with helicase C domain 12793.8090.2332Yes
10RSAD2NARSAD2
Entrez,  Source
radical S-adenosyl methionine domain containing 23303.6490.2540Yes
11IFI44NAIFI44
Entrez,  Source
interferon-induced protein 443863.4890.2734Yes
12SAMD9LNASAMD9L
Entrez,  Source
sterile alpha motif domain containing 9-like4003.4620.2950Yes
13GBP2NAGBP2
Entrez,  Source
guanylate binding protein 2, interferon-inducible4483.2850.3136Yes
14IFI44LNAIFI44L
Entrez,  Source
interferon-induced protein 44-like4723.2080.3330Yes
15SAMD9NASAMD9
Entrez,  Source
sterile alpha motif domain containing 94753.2000.3535Yes
16DDX60NA5053.1250.3721Yes
17SELLNASELL
Entrez,  Source
selectin L (lymphocyte adhesion molecule 1)5193.1050.3914Yes
18CCRL2NACCRL2
Entrez,  Source
chemokine (C-C motif) receptor-like 25842.9610.4069Yes
19HERC6NAHERC6
Entrez,  Source
hect domain and RLD 66072.9070.4244Yes
20DHX58NA6092.9060.4431Yes
21USP18NAUSP18
Entrez,  Source
ubiquitin specific peptidase 187112.7360.4551Yes
22RTP4NARTP4
Entrez,  Source
receptor transporter protein 47992.5850.4669Yes
23CASP1NACASP1
Entrez,  Source
caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)10012.3380.4708Yes
24FAM46ANAFAM46A
Entrez,  Source
family with sequence similarity 46, member A10372.2870.4836Yes
25GBP4NAGBP4
Entrez,  Source
guanylate binding protein 411392.1810.4920Yes
26CXCL10NACXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 1012242.1070.5009Yes
27IRF7NAIRF7
Entrez,  Source
interferon regulatory factor 713222.0230.5085Yes
28CXCL11NACXCL11
Entrez,  Source
chemokine (C-X-C motif) ligand 1113981.9500.5169Yes
29LAMP3NALAMP3
Entrez,  Source
lysosomal-associated membrane protein 314011.9500.5294Yes
30NCOA7NANCOA7
Entrez,  Source
nuclear receptor coactivator 715071.8800.5356Yes
31OAS1NAOAS1
Entrez,  Source
2',5'-oligoadenylate synthetase 1, 40/46kDa15561.8400.5448Yes
32MX1NAMX1
Entrez,  Source
myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)15871.8170.5549Yes
33IL7NAIL7
Entrez,  Source
interleukin 717561.6920.5564Yes
34TRIM26NATRIM26
Entrez,  Source
tripartite motif-containing 2621071.4940.5465Yes
35PARP12NAPARP12
Entrez,  Source
poly (ADP-ribose) polymerase family, member 1224621.3400.5353Yes
36PSME1NAPSME1
Entrez,  Source
proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)27691.2220.5261Yes
37SP110NASP110
Entrez,  Source
SP110 nuclear body protein27851.2170.5331Yes
38CASP8NACASP8
Entrez,  Source
caspase 8, apoptosis-related cysteine peptidase27961.2140.5404Yes
39UBE2L6NAUBE2L6
Entrez,  Source
ubiquitin-conjugating enzyme E2L 628951.1840.5425Yes
40STAT2NASTAT2
Entrez,  Source
signal transducer and activator of transcription 2, 113kDa29471.1660.5472Yes
41IFI30NAIFI30
Entrez,  Source
interferon, gamma-inducible protein 3029771.1550.5530Yes
42MOV10NAMOV10
Entrez,  Source
Mov10, Moloney leukemia virus 10, homolog (mouse)31281.1090.5518Yes
43CD47NACD47
Entrez,  Source
CD47 molecule31441.1050.5581Yes
44LAP3NALAP3
Entrez,  Source
leucine aminopeptidase 331471.1040.5651Yes
45IRF1NAIRF1
Entrez,  Source
interferon regulatory factor 133551.0410.5603No
46EIF2AK2NAEIF2AK2
Entrez,  Source
eukaryotic translation initiation factor 2-alpha kinase 234481.0160.5617No
47NUB1NANUB1
Entrez,  Source
negative regulator of ubiquitin-like proteins 135820.9760.5605No
48RNF31NARNF31
Entrez,  Source
ring finger protein 3137290.9340.5584No
49TDRD7NATDRD7
Entrez,  Source
tudor domain containing 737800.9210.5615No
50TRIM25NATRIM25
Entrez,  Source
tripartite motif-containing 2541510.8290.5462No
51WARSNAWARS
Entrez,  Source
tryptophanyl-tRNA synthetase42770.7980.5444No
52PSME2NAPSME2
Entrez,  Source
proteasome (prosome, macropain) activator subunit 2 (PA28 beta)43360.7850.5462No
53TRIM5NATRIM5
Entrez,  Source
tripartite motif-containing 545440.7380.5394No
54HLA-CNAHLA-C
Entrez,  Source
major histocompatibility complex, class I, C46530.7130.5379No
55ISG20NAISG20
Entrez,  Source
interferon stimulated exonuclease gene 20kDa47340.6980.5380No
56CNPNACNP
Entrez,  Source
2',3'-cyclic nucleotide 3' phosphodiesterase47700.6890.5404No
57EPSTI1NAEPSTI1
Entrez,  Source
epithelial stromal interaction 1 (breast)47920.6840.5437No
58CMPK2NA49430.6520.5395No
59LGALS3BPNALGALS3BP
Entrez,  Source
lectin, galactoside-binding, soluble, 3 binding protein49760.6450.5419No
60TXNIPNATXNIP
Entrez,  Source
thioredoxin interacting protein52420.5970.5309No
61LPAR6NA54990.5500.5202No
62NMINANMI
Entrez,  Source
N-myc (and STAT) interactor56290.5290.5164No
63TRIM21NATRIM21
Entrez,  Source
tripartite motif-containing 2159100.4850.5038No
64TRAFD1NATRAFD1
Entrez,  Source
TRAF-type zinc finger domain containing 159960.4670.5021No
65PSMA3NAPSMA3
Entrez,  Source
proteasome (prosome, macropain) subunit, alpha type, 360420.4600.5025No
66IRF9NA71140.2990.4446No
67TAP1NATAP1
Entrez,  Source
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)80460.1970.3938No
68PROCRNAPROCR
Entrez,  Source
protein C receptor, endothelial (EPCR)82240.1750.3851No
69SLC25A28NASLC25A28
Entrez,  Source
solute carrier family 25, member 2884860.1540.3715No
70RIPK2NARIPK2
Entrez,  Source
receptor-interacting serine-threonine kinase 290240.0960.3421No
71OGFRNAOGFR
Entrez,  Source
opioid growth factor receptor94600.0570.3181No
72ADARNAADAR
Entrez,  Source
adenosine deaminase, RNA-specific95690.0450.3124No
73TMEM140NATMEM140
Entrez,  Source
transmembrane protein 14096840.0280.3062No
74PARP14NAPARP14
Entrez,  Source
poly (ADP-ribose) polymerase family, member 1410773-0.0560.2457No
75TRIM14NATRIM14
Entrez,  Source
tripartite motif-containing 1410792-0.0580.2451No
76IFI35NAIFI35
Entrez,  Source
interferon-induced protein 3511838-0.1730.1878No
77B2MNAB2M
Entrez,  Source
beta-2-microglobulin11935-0.1840.1836No
78IL15NAIL15
Entrez,  Source
interleukin 1512477-0.2470.1549No
79PARP9NAPARP9
Entrez,  Source
poly (ADP-ribose) polymerase family, member 914190-0.5290.0626No
80IRF2NAIRF2
Entrez,  Source
interferon regulatory factor 214428-0.5790.0531No
81ELF1NAELF1
Entrez,  Source
E74-like factor 1 (ets domain transcription factor)14909-0.6970.0308No
82IL4RNAIL4R
Entrez,  Source
interleukin 4 receptor15445-0.8440.0063No
83PNPT1NAPNPT1
Entrez,  Source
polyribonucleotide nucleotidyltransferase 115458-0.8500.0111No
84PSMB8NAPSMB8
Entrez,  Source
proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7)15687-0.9230.0043No
85IFITM1NAIFITM1
Entrez,  Source
interferon induced transmembrane protein 1 (9-27)16005-1.047-0.0066No
86PLSCR1NAPLSCR1
Entrez,  Source
phospholipid scramblase 116511-1.310-0.0264No
87UBA7NA16774-1.485-0.0315No
88LY6ENALY6E
Entrez,  Source
lymphocyte antigen 6 complex, locus E16836-1.538-0.0250No
89IFITM3NAIFITM3
Entrez,  Source
interferon induced transmembrane protein 3 (1-8U)17099-1.789-0.0281No
90PSMB9NAPSMB9
Entrez,  Source
proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)17189-1.900-0.0208No
91C1SNAC1S
Entrez,  Source
complement component 1, s subcomponent17464-2.349-0.0210No
92BATF2NABATF2
Entrez,  Source
basic leucine zipper transcription factor, ATF-like 217495-2.417-0.0070No
93IFITM2NAIFITM2
Entrez,  Source
interferon induced transmembrane protein 2 (1-8D)17573-2.6380.0057No
94IFI27NAIFI27
Entrez,  Source
interferon, alpha-inducible protein 2717575-2.6400.0226No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_INTERFERON_ALPHA_RESPONSE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_INTERFERON_ALPHA_RESPONSE: Random ES distribution   
Gene set null distribution of ES for HALLMARK_INTERFERON_ALPHA_RESPONSE