Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1w1a
GeneSetHALLMARK_IL6_JAK_STAT3_SIGNALING
Enrichment Score (ES)0.46624398
Normalized Enrichment Score (NES)1.5218295
Nominal p-value0.0012515645
FDR q-value0.018456317
FWER p-Value0.161
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_IL6_JAK_STAT3_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TLR2NATLR2
Entrez,  Source
toll-like receptor 2844.5700.0402Yes
2CSF1NACSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)884.5560.0847Yes
3IL1R1NAIL1R1
Entrez,  Source
interleukin 1 receptor, type I1414.3590.1246Yes
4CSF2RANACSF2RA
Entrez,  Source
colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)1484.3330.1668Yes
5HMOX1NAHMOX1
Entrez,  Source
heme oxygenase (decycling) 12813.8020.1967Yes
6CRLF2NACRLF2
Entrez,  Source
cytokine receptor-like factor 23283.6640.2301Yes
7CD14NACD14
Entrez,  Source
CD14 molecule4023.4560.2599Yes
8TNFRSF21NATNFRSF21
Entrez,  Source
tumor necrosis factor receptor superfamily, member 214463.3020.2899Yes
9IL6NAIL6
Entrez,  Source
interleukin 6 (interferon, beta 2)6902.7780.3036Yes
10FASNAFAS
Entrez,  Source
Fas (TNF receptor superfamily, member 6)7332.6790.3275Yes
11TNFRSF1BNATNFRSF1B
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1B9002.4560.3424Yes
12CXCL10NACXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 1012242.1070.3450Yes
13CXCL11NACXCL11
Entrez,  Source
chemokine (C-X-C motif) ligand 1113981.9500.3545Yes
14BAK1NABAK1
Entrez,  Source
BCL2-antagonist/killer 114941.8850.3677Yes
15LEPRNALEPR
Entrez,  Source
leptin receptor16041.8040.3793Yes
16IL7NAIL7
Entrez,  Source
interleukin 717561.6920.3874Yes
17STAT1NASTAT1
Entrez,  Source
signal transducer and activator of transcription 1, 91kDa20251.5430.3876Yes
18CD9NACD9
Entrez,  Source
CD9 molecule20461.5290.4015Yes
19TNFRSF1ANATNFRSF1A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1A23261.4030.3997Yes
20PIM1NAPIM1
Entrez,  Source
pim-1 oncogene25081.3200.4025Yes
21IL6STNAIL6ST
Entrez,  Source
interleukin 6 signal transducer (gp130, oncostatin M receptor)25731.2920.4116Yes
22STAM2NASTAM2
Entrez,  Source
signal transducing adaptor molecule (SH3 domain and ITAM motif) 226321.2700.4208Yes
23IL1R2NAIL1R2
Entrez,  Source
interleukin 1 receptor, type II28801.1880.4187Yes
24CSF2NACSF2
Entrez,  Source
colony stimulating factor 2 (granulocyte-macrophage)29191.1750.4281Yes
25STAT2NASTAT2
Entrez,  Source
signal transducer and activator of transcription 2, 113kDa29471.1660.4380Yes
26MAP3K8NAMAP3K8
Entrez,  Source
mitogen-activated protein kinase kinase kinase 829931.1500.4468Yes
27OSMRNAOSMR
Entrez,  Source
oncostatin M receptor33451.0440.4374Yes
28IRF1NAIRF1
Entrez,  Source
interferon regulatory factor 133551.0410.4471Yes
29TNFRSF12ANATNFRSF12A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 12A35270.9900.4473Yes
30CD38NACD38
Entrez,  Source
CD38 molecule36110.9650.4521Yes
31CBLNACBL
Entrez,  Source
Cas-Br-M (murine) ecotropic retroviral transforming sequence37860.9200.4514Yes
32CSF2RBNACSF2RB
Entrez,  Source
colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)41050.8410.4419Yes
33IFNAR1NAIFNAR1
Entrez,  Source
interferon (alpha, beta and omega) receptor 141720.8230.4463Yes
34LTBRNALTBR
Entrez,  Source
lymphotoxin beta receptor (TNFR superfamily, member 3)41990.8160.4529Yes
35IL10RBNAIL10RB
Entrez,  Source
interleukin 10 receptor, beta42340.8080.4589Yes
36ITGA4NAITGA4
Entrez,  Source
integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)42450.8050.4662Yes
37ITGB3NAITGB3
Entrez,  Source
integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)46150.7220.4527No
38PF4NAPF4
Entrez,  Source
platelet factor 4 (chemokine (C-X-C motif) ligand 4)52000.6050.4260No
39IL15RANAIL15RA
Entrez,  Source
interleukin 15 receptor, alpha53820.5700.4215No
40HAX1NAHAX1
Entrez,  Source
HCLS1 associated protein X-156800.5210.4100No
41CSF3RNACSF3R
Entrez,  Source
colony stimulating factor 3 receptor (granulocyte)57950.5010.4085No
42SOCS3NASOCS3
Entrez,  Source
suppressor of cytokine signaling 359990.4670.4018No
43TGFB1NATGFB1
Entrez,  Source
transforming growth factor, beta 1 (Camurati-Engelmann disease)68160.3410.3595No
44PTPN2NAPTPN2
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 268650.3340.3601No
45JUNNAJUN
Entrez,  Source
jun oncogene70420.3100.3533No
46IRF9NA71140.2990.3523No
47IFNGR2NAIFNGR2
Entrez,  Source
interferon gamma receptor 2 (interferon gamma transducer 1)71500.2940.3532No
48CCL7NACCL7
Entrez,  Source
chemokine (C-C motif) ligand 772260.2840.3518No
49CXCL9NACXCL9
Entrez,  Source
chemokine (C-X-C motif) ligand 981560.1810.3017No
50IL2RANAIL2RA
Entrez,  Source
interleukin 2 receptor, alpha83340.1670.2934No
51PTPN1NAPTPN1
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 184240.1590.2900No
52CNTFRNACNTFR
Entrez,  Source
ciliary neurotrophic factor receptor84520.1560.2900No
53CD36NACD36
Entrez,  Source
CD36 molecule (thrombospondin receptor)90750.0920.2562No
54IL2RGNAIL2RG
Entrez,  Source
interleukin 2 receptor, gamma (severe combined immunodeficiency)95380.0470.2308No
55PIK3R5NAPIK3R5
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 5, p10198450.0040.2138No
56IL12RB1NAIL12RB1
Entrez,  Source
interleukin 12 receptor, beta 199800.0000.2063No
57CD44NACD44
Entrez,  Source
CD44 molecule (Indian blood group)10693-0.0500.1670No
58IL3RANAIL3RA
Entrez,  Source
interleukin 3 receptor, alpha (low affinity)10696-0.0500.1674No
59ACVR1BNAACVR1B
Entrez,  Source
activin A receptor, type IB11143-0.0980.1434No
60ACVRL1NAACVRL1
Entrez,  Source
activin A receptor type II-like 111425-0.1270.1289No
61STAT3NASTAT3
Entrez,  Source
signal transducer and activator of transcription 3 (acute-phase response factor)11455-0.1290.1286No
62IL18R1NAIL18R1
Entrez,  Source
interleukin 18 receptor 111507-0.1340.1270No
63REG1ANAREG1A
Entrez,  Source
regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein)11745-0.1610.1154No
64PLA2G2ANAPLA2G2A
Entrez,  Source
phospholipase A2, group IIA (platelets, synovial fluid)11827-0.1720.1125No
65A2MNAA2M
Entrez,  Source
alpha-2-macroglobulin11895-0.1800.1106No
66IL17RBNAIL17RB
Entrez,  Source
interleukin 17 receptor B12002-0.1900.1065No
67GRB2NAGRB2
Entrez,  Source
growth factor receptor-bound protein 212056-0.1960.1055No
68IFNGR1NAIFNGR1
Entrez,  Source
interferon gamma receptor 112333-0.2310.0923No
69DNTTNADNTT
Entrez,  Source
deoxynucleotidyltransferase, terminal12492-0.2500.0859No
70TNFNATNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)12645-0.2690.0801No
71SOCS1NASOCS1
Entrez,  Source
suppressor of cytokine signaling 112911-0.3030.0682No
72CXCL13NACXCL13
Entrez,  Source
chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)12929-0.3070.0703No
73TYK2NATYK2
Entrez,  Source
tyrosine kinase 213230-0.3530.0570No
74MYD88NAMYD88
Entrez,  Source
myeloid differentiation primary response gene (88)13247-0.3560.0596No
75PTPN11NAPTPN11
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 11 (Noonan syndrome 1)14694-0.640-0.0149No
76IL17RANAIL17RA
Entrez,  Source
interleukin 17 receptor A15208-0.777-0.0360No
77PDGFCNAPDGFC
Entrez,  Source
platelet derived growth factor C15242-0.785-0.0301No
78IL4RNAIL4R
Entrez,  Source
interleukin 4 receptor15445-0.844-0.0331No
79CCR1NACCR1
Entrez,  Source
chemokine (C-C motif) receptor 115496-0.861-0.0275No
80CXCL3NACXCL3
Entrez,  Source
chemokine (C-X-C motif) ligand 315611-0.898-0.0250No
81IL13RA1NAIL13RA1
Entrez,  Source
interleukin 13 receptor, alpha 115985-1.040-0.0357No
82INHBENAINHBE
Entrez,  Source
inhibin, beta E16082-1.076-0.0305No
83IL9RNAIL9R
Entrez,  Source
interleukin 9 receptor16500-1.298-0.0410No
84LTBNALTB
Entrez,  Source
lymphotoxin beta (TNF superfamily, member 3)16882-1.578-0.0468No
85CXCL1NACXCL1
Entrez,  Source
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)17669-3.027-0.0611No
86IL1BNAIL1B
Entrez,  Source
interleukin 1, beta17833-3.984-0.0311No
87EBI3NAEBI3
Entrez,  Source
Epstein-Barr virus induced gene 317838-3.9970.0079No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_IL6_JAK_STAT3_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_IL6_JAK_STAT3_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_IL6_JAK_STAT3_SIGNALING