ISMARA results: hela.gfp.cas9.r3

Sample name: hela.gfp.cas9.r3

Sorted Z-values histogram for the sample hela.gfp.cas9.r3

Sorted z-values for every WM.

WM name	Z-value	Associated genes
YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ	4.252	YBX1 FOS NFYC NFYA NFYB CEBPZ
KLF16_SP2	3.159	KLF16 SP2
HIC1	2.998	HIC1
FOXK1_FOXP2_FOXB1_FOXP3	2.822	FOXK1 FOXP2 FOXB1 FOXP3
YY1_YY2	2.672	YY1 YY2
HIC2	2.660	HIC2
MAFK	2.647	MAFK
NFIX_NFIB	2.635	NFIX NFIB
POU2F2_POU3F1	2.263	POU2F2 POU3F1
KLF8	2.199	KLF8
EPAS1_BCL3	2.134	EPAS1 BCL3
TFAP2C	2.128	TFAP2C
BARHL2	2.048	BARHL2
OLIG3_NEUROD2_NEUROG2	1.991	OLIG3 NEUROD2 NEUROG2
SP3	1.944	SP3
TCF3_MYOG	1.937	TCF3 MYOG
SMAD4	1.814	SMAD4
KLF12	1.739	KLF12
TEAD4	1.729	TEAD4
TFEC_MITF_ARNTL_BHLHE41	1.687	TFEC MITF ARNTL BHLHE41
POU3F3_POU3F4	1.658	POU3F3 POU3F4
ESRRA_ESR2	1.656	ESRRA ESR2
HOXC8	1.651	HOXC8
SRY	1.644	SRY
ESRRB_ESRRG	1.639	ESRRB ESRRG
RCOR1_MTA3	1.621	RCOR1 MTA3
PLAGL1	1.616	PLAGL1
NR5A2	1.614	NR5A2
ETV7	1.610	ETV7
LHX8	1.595	LHX8
FOXO4	1.567	FOXO4
HOXB6_PRRX2	1.542	HOXB6 PRRX2
NHLH1	1.523	NHLH1
ZNF524	1.516	ZNF524
TBX15_MGA	1.508	TBX15 MGA
MYF6	1.501	MYF6
GATA2	1.499	GATA2
MAZ_ZNF281_GTF2F1	1.461	MAZ ZNF281 GTF2F1
ZBTB6	1.422	ZBTB6
TAL1	1.405	TAL1
RFX3_RFX2	1.377	RFX3 RFX2
PPARA	1.377	PPARA
ID4_TCF4_SNAI2	1.369	ID4 TCF4 SNAI2
ETV3	1.345	ETV3
ETV1_ERF_FEV_ELF1	1.326	ETV1 ERF FEV ELF1
MEF2B	1.321	MEF2B
POU5F1_POU2F3	1.321	POU5F1 POU2F3
HMX1	1.285	HMX1
CUX1	1.279	CUX1
GATA3	1.233	GATA3
HOXB8	1.221	HOXB8
PITX1	1.211	PITX1
WT1_MTF1_ZBTB7B	1.194	WT1 MTF1 ZBTB7B
DDIT3	1.185	DDIT3
ISL1	1.174	ISL1
OLIG1	1.160	OLIG1
NKX6-2	1.155	NKX6-2
SOX5	1.133	SOX5
PITX3	1.131	PITX3
SOX6	1.131	SOX6
ATF5	1.115	ATF5
ZNF384	1.107	ZNF384
ISX	1.104	ISX
POU2F1	1.098	POU2F1
PBX3	1.078	PBX3
EZH2	1.064	EZH2
FOXQ1	1.056	FOXQ1
NR4A2	1.044	NR4A2
LEF1	1.009	LEF1
OLIG2_NEUROD1_ATOH1	0.961	OLIG2 NEUROD1 ATOH1
HMBOX1	0.954	HMBOX1
TFAP4_MSC	0.949	TFAP4 MSC
NR1D1	0.935	NR1D1
NR3C1	0.931	NR3C1
MYBL2	0.925	MYBL2
RXRA_NR2F6_NR2C2	0.908	RXRA NR2F6 NR2C2
LHX6	0.901	LHX6
EN1_ESX1_GBX1	0.889	EN1 ESX1 GBX1
PTF1A	0.883	PTF1A
HOXC11	0.865	HOXC11
CREB5_CREM_JUNB	0.860	CREB5 CREM JUNB
MEF2D_MEF2A	0.832	MEF2D MEF2A
OVOL1	0.825	OVOL1
NOTO_VSX2_DLX2_DLX6_NKX6-1	0.799	NOTO VSX2 DLX2 DLX6 NKX6-1
FOXA2_FOXJ3	0.790	FOXA2 FOXJ3
NR1I3	0.779	NR1I3
HMX2	0.778	HMX2
HIF1A	0.775	HIF1A
ARID5B	0.770	ARID5B
TFAP2B	0.768	TFAP2B
HOXA2_HOXB1	0.764	HOXA2 HOXB1
HMGA1	0.758	HMGA1
HOXD4	0.753	HOXD4
MECOM	0.749	MECOM
HOMEZ	0.744	HOMEZ
FOXL1	0.731	FOXL1
MAX_TFEB	0.719	MAX TFEB
E4F1	0.719	E4F1
CUX2	0.718	CUX2
OSR1_OSR2	0.716	OSR1 OSR2
HNF4G	0.708	HNF4G
ZNF333	0.708	ZNF333
NANOG	0.694	NANOG
NR2F2	0.687	NR2F2
PLAG1	0.680	PLAG1
SMAD3	0.679	SMAD3
ZBTB33_CHD2	0.665	ZBTB33 CHD2
PGR	0.654	PGR
UGUGCUU	0.639	hsa-miR-218-5p
MEF2C	0.625	MEF2C
PATZ1_KLF4	0.622	PATZ1 KLF4
SOX18	0.617	SOX18
MAFF_MAFG	0.617	MAFF MAFG
LHX3	0.608	LHX3
ZNF282	0.603	ZNF282
DBP	0.603	DBP
BRCA1	0.601	BRCA1
TP73	0.556	TP73
STAT1_STAT3_BCL6	0.553	STAT1 STAT3 BCL6
GLI2	0.548	GLI2
SREBF1_TFE3	0.534	SREBF1 TFE3
HMGA2	0.530	HMGA2
HOXA13	0.528	HOXA13
SMAD2	0.525	SMAD2
SIX5_SMARCC2_HCFC1	0.519	SIX5 SMARCC2 HCFC1
MEIS1	0.517	MEIS1
RXRG	0.507	RXRG
FOXC1	0.503	FOXC1
HAND1	0.499	HAND1
BBX	0.499	BBX
XBP1	0.499	XBP1
HSFY2	0.488	HSFY2
KLF13	0.483	KLF13
PPARD	0.477	PPARD
CEBPA	0.471	CEBPA
ZSCAN4	0.466	ZSCAN4
HNF1A_HNF1B	0.459	HNF1A HNF1B
E2F8	0.448	E2F8
STAT6	0.445	STAT6
AUGGCAC	0.444	hsa-miR-183-5p.1
HLF_TEF	0.444	HLF TEF
BPTF	0.429	BPTF
THRB	0.427	THRB
SOX17	0.420	SOX17
HOXD1	0.413	HOXD1
NR2F1	0.413	NR2F1
E2F3	0.412	E2F3
MLXIPL	0.405	MLXIPL
MSX1	0.398	MSX1
SREBF2	0.396	SREBF2
ZNF423	0.390	ZNF423
TLX2	0.390	TLX2
PAX8	0.384	PAX8
BARHL1	0.376	BARHL1
SP4_PML	0.371	SP4 PML
RARG	0.366	RARG
HES1	0.366	HES1
UGGCACU	0.363
OTX1	0.352	OTX1
SHOX2_HOXC5	0.345	SHOX2 HOXC5
NFATC4	0.345	NFATC4
FOXA3_FOXC2	0.343	FOXA3 FOXC2
NFATC2_NFATC3	0.342	NFATC2 NFATC3
TBX5	0.338	TBX5
UAAGACG	0.337	hsa-miR-208a-3p hsa-miR-208b-3p
REST	0.335	REST
HINFP1	0.334
SOX11	0.331	SOX11
GATA1_GATA4	0.328	GATA1 GATA4
SIX4	0.327	SIX4
NKX2-5	0.325	NKX2-5
ETV4_ETS2	0.325	ETV4 ETS2
CPEB1	0.317	CPEB1
UAUUGCU	0.314	hsa-miR-137
THRA_RXRB	0.309	THRA RXRB
ZBTB18	0.291	ZBTB18
EVX2	0.289	EVX2
OTX2_CRX	0.284	OTX2 CRX
ESR1	0.272	ESR1
HOXD11_HOXA11	0.271	HOXD11 HOXA11
SIX1_SIX3_SIX2	0.263	SIX1 SIX3 SIX2
KLF15	0.262	KLF15
CTCF_CTCFL	0.262	CTCF CTCFL
ZIC1	0.259	ZIC1
T	0.253	T
DLX1_HOXA3_BARX2	0.247	DLX1 HOXA3 BARX2
NR1H2	0.246	NR1H2
ZIC2_GLI1	0.243	ZIC2 GLI1
GFI1B	0.243	GFI1B
DLX3_EVX1_MEOX1	0.240	DLX3 EVX1 MEOX1
AR_NR3C2	0.238	AR NR3C2
GMEB1	0.231	GMEB1
NKX3-1	0.231	NKX3-1
IRX2	0.223	IRX2
NR4A3	0.222	NR4A3
DLX5	0.215	DLX5
POU6F2	0.208	POU6F2
PBX2	0.207	PBX2
PBX1	0.207	PBX1
UAAGACU	0.206	hsa-miR-499a-5p
SOX1	0.199	SOX1
EBF1	0.197	EBF1
ALX1_ARX	0.194	ALX1 ARX
TFCP2L1	0.187	TFCP2L1
HDX	0.176	HDX
FOXO3_FOXD2	0.174	FOXO3 FOXD2
ZNF263	0.173	ZNF263
ZBTB3	0.172	ZBTB3
HOXA1	0.170	HOXA1
DMC1	0.166	DMC1
GATA5	0.165	GATA5
POU1F1	0.163	POU1F1
AAUCUCU	0.163	hsa-miR-216b-5p
NFAT5	0.163	NFAT5
ZEB1	0.154	ZEB1
ZKSCAN1	0.154	ZKSCAN1
SOX8	0.151	SOX8
GGAGUGU	0.147	hsa-miR-122-5p
CCAGCAU	0.146	hsa-miR-338-3p
UBP1	0.146	UBP1
HOXC6_HOXA7	0.145	HOXC6 HOXA7
NR2E1	0.145	NR2E1
HNF4A	0.137	HNF4A
MAF_NRL	0.136	MAF NRL
AGGUAGU	0.133	hsa-miR-196a-5p hsa-miR-196b-5p
ZNF8	0.128	ZNF8 ZNF8
GCM2	0.121	GCM2
PRDM14	0.119	PRDM14
SOX30	0.114	SOX30
DMBX1	0.111	DMBX1
DUXA	0.110	DUXA
GLIS1	0.108	GLIS1
ISL2	0.107	ISL2
FOXD1_FOXO1_FOXO6_FOXG1_FOXP1	0.104	FOXD1 FOXO1 FOXO6 FOXG1 FOXP1
MSX2	0.100	MSX2
GMEB2	0.099	GMEB2
POU4F2	0.099	POU4F2
EBF3	0.098	EBF3
NR6A1	0.097	NR6A1
NR1I2	0.094	NR1I2
TWIST1_SNAI1	0.091	TWIST1 SNAI1
SOX14	0.087	SOX14
SOX21	0.084	SOX21
AACAGUC	0.082	hsa-miR-132-3p hsa-miR-212-3p
PRDM4	0.081	PRDM4
VSX1	0.073	VSX1
E2F4	0.069	E2F4
CCUUGGC	0.063	hsa-miR-212-5p
BARX1	0.059	BARX1
CREB3L1_CREB3	0.053	CREB3L1 CREB3
ATF7	0.053	ATF7
CGUACCG	0.050	hsa-miR-126-3p.1
ZBTB12	0.050	ZBTB12
ETV6	0.049	ETV6
GLIS2	0.048	GLIS2
UGCAUAG	0.048	hsa-miR-153-3p
GCUGGUG	0.044	hsa-miR-138-5p
UGACAUC	0.043	hsa-miR-489-3p
POU6F1	0.042	POU6F1
HOXA9	0.041	HOXA9
PAX4	0.040	PAX4
AGAUCAG	0.038	hsa-miR-383-5p.2
ETV2	0.037	ETV2
IRX5	0.036	IRX5
NKX1-1	0.034	NKX1-1
AAUCUCA	0.033	hsa-miR-216a-5p
PRDM1	0.031	PRDM1
MNT_HEY1_HEY2	0.029	MNT HEY1 HEY2
CGUGUCU	0.026	hsa-miR-187-3p
DBX2_HLX	0.025	DBX2 HLX
ACUGGCC	0.024	hsa-miR-193a-3p hsa-miR-193b-3p
GGAAGAC	0.021	hsa-miR-7-5p
CDC5L	0.021	CDC5L
PITX2	0.017	PITX2
AUGUGCC	0.014	hsa-miR-455-5p
UGAAAUG	0.007
ZNF784	0.005	ZNF784
GAUCAGA	0.002	hsa-miR-383-5p.1
UUUUUGC	0.002	hsa-miR-129-5p
ZNF35	0.001	ZNF35
GUACCGU	-0.000	hsa-miR-126-3p.2
ACUGCAU	-0.001	hsa-miR-217 hsa-miR-6807-3p
TCF7	-0.002	TCF7
UGCAGUC	-0.003	hsa-miR-455-3p.2
MYBL1	-0.004	MYBL1
CDX1	-0.004	CDX1
CACCUCC	-0.005	hsa-miR-1306-5p
GAGAACU	-0.006	hsa-miR-146a-5p hsa-miR-146b-5p hsa-miR-7153-5p
WRNIP1	-0.007	WRNIP1
BCL6B	-0.008	BCL6B
ONECUT1	-0.009	ONECUT1
PDX1	-0.015	PDX1
AGUGGUU	-0.016	hsa-miR-140-5p
UGUGCGU	-0.017	hsa-miR-210-3p
GGACGGA	-0.017	hsa-miR-184
CCACAGG	-0.019	hsa-miR-140-3p.1
NKX2-4	-0.020	NKX2-4
MYOD1	-0.021	MYOD1
HOXA6	-0.025	HOXA6
GAUAUGU	-0.027	hsa-miR-190a-5p hsa-miR-190b
RUNX1_RUNX2	-0.028	RUNX1 RUNX2
AUGACAC	-0.028	hsa-miR-425-5p
AIRE	-0.029	AIRE
EN2_GBX2_LBX2	-0.030	EN2 GBX2 LBX2
ZBTB49	-0.030	ZBTB49
FOXJ2	-0.031	FOXJ2
ACCCGUA	-0.034	hsa-miR-99a-5p hsa-miR-99b-5p hsa-miR-100-5p
VAX2_RHOXF2	-0.039	VAX2 RHOXF2
UGACCUA	-0.042	hsa-miR-192-5p hsa-miR-215-5p
AAGGCAC	-0.044	hsa-miR-124-3p.1
PAX1_PAX9	-0.046	PAX1 PAX9
PAX3	-0.052	PAX3
GFI1	-0.054	GFI1
AACCGUU	-0.056	hsa-miR-451a
TBX21_TBR1	-0.057	TBX21 TBR1
HSF1	-0.057	HSF1
AACGGAA	-0.057	hsa-miR-191-5p
HOXA5	-0.059	HOXA5
CUGGCUG	-0.064	hsa-miR-3064-5p hsa-miR-6504-5p
HMX3	-0.071	HMX3
LMX1B_MNX1_RAX2	-0.079	LMX1B MNX1 RAX2
KLF3	-0.083	KLF3
ZNF410	-0.093	ZNF410
RORA	-0.098	RORA
EMX1	-0.099	EMX1
CAGUCCA	-0.100	hsa-miR-455-3p.1
IKZF1	-0.100	IKZF1
DRGX_PROP1	-0.105	DRGX PROP1
TBX4	-0.109	TBX4
ALX3	-0.111	ALX3
NKX1-2_RAX	-0.111	NKX1-2 RAX
AGCACCA	-0.112	hsa-miR-29a-3p hsa-miR-29b-3p hsa-miR-29c-3p
ARNT	-0.113	ARNT
SPIB	-0.122	SPIB
BACH1_NFE2_NFE2L2	-0.128	BACH1 NFE2 NFE2L2
SOX13_SOX12	-0.129	SOX13 SOX12
AACCUGG	-0.130	hsa-miR-490-3p
NKX2-3	-0.141	NKX2-3
CAGUAGU	-0.144	hsa-miR-199a-3p hsa-miR-199b-3p hsa-miR-3129-5p
GCCUGUC	-0.146	hsa-miR-214-5p
ZBED1	-0.146	ZBED1 ZBED1
CCUUCAU	-0.148	hsa-miR-205-5p
TP63	-0.148	TP63
CENPB	-0.150	CENPB
ZFHX3	-0.152	ZFHX3
IRX6_IRX4	-0.152	IRX6 IRX4
UUGGCAA	-0.161	hsa-miR-182-5p
CUACAGU	-0.164	hsa-miR-139-5p
UCCCUUU	-0.172	hsa-miR-204-5p hsa-miR-211-5p
UGCAUUG	-0.173	hsa-miR-33a-5p hsa-miR-33b-5p
TBX20	-0.176	TBX20
AGCUUAU	-0.177	hsa-miR-21-5p hsa-miR-590-5p
SOX10_SOX15	-0.178	SOX10 SOX15
PKNOX2	-0.188	PKNOX2
RELB	-0.199	RELB
TLX1_NFIC	-0.204	TLX1 NFIC
MXI1_MYC_MYCN	-0.207	MXI1 MYC MYCN
NR4A1	-0.208	NR4A1
GAUUGUC	-0.214	hsa-miR-219a-5p hsa-miR-4782-3p hsa-miR-6766-3p
TCF7L1	-0.218	TCF7L1
UAAUGCU	-0.219	hsa-miR-155-5p
ZNF691	-0.220	ZNF691
ZBTB4	-0.222	ZBTB4
AAUGCCC	-0.228	hsa-miR-365a-3p hsa-miR-365b-3p
ARID5A	-0.230	ARID5A
RARB	-0.232	RARB
ZKSCAN3	-0.237	ZKSCAN3
NR0B1	-0.237	NR0B1
SOX9	-0.244	SOX9
SP100	-0.250	SP100
FOXA1	-0.254	FOXA1
SOX4	-0.254	SOX4
TCF7L2	-0.257	TCF7L2
HOXB7	-0.259	HOXB7
OTP_PHOX2B_LHX1_LMX1A_LHX5_HOXC4	-0.263	OTP PHOX2B LHX1 LMX1A LHX5 HOXC4 HOXC4
NKX6-3	-0.263	NKX6-3
UACAGUA	-0.265	hsa-miR-101-3p.2
BATF3	-0.265	BATF3
EOMES	-0.268	EOMES
IKZF2	-0.269	IKZF2
CBFB	-0.272	CBFB
ZNF274	-0.274	ZNF274
FOXF2_FOXJ1	-0.274	FOXF2 FOXJ1
GAGAUGA	-0.277	hsa-miR-143-3p hsa-miR-4770 hsa-miR-6088
NKX2-1	-0.278	NKX2-1
GUCAGUU	-0.278	hsa-miR-223-3p
ERG	-0.279	ERG
RORC	-0.282	RORC
ACCCUGU	-0.284	hsa-miR-10a-5p hsa-miR-10b-5p
GCUACAU	-0.285	hsa-miR-221-3p hsa-miR-222-3p
HOXD10	-0.288	HOXD10
AUAAAGU	-0.292	hsa-miR-142-5p hsa-miR-5590-3p
UUGGCAC	-0.295	hsa-miR-96-5p hsa-miR-1271-5p
GSC_GSC2	-0.300	GSC GSC2
GLIS3	-0.303	GLIS3
HES7_HES5	-0.304	HES7 HES5
E2F7_E2F1	-0.308	E2F7 E2F1
FOXN1	-0.308	FOXN1
CXXC1	-0.311	CXXC1
ACCACAG	-0.316	hsa-miR-140-3p.2
HOXC13	-0.324	HOXC13
ATF4	-0.325	ATF4
NR2C1	-0.327	NR2C1
TBP	-0.338	TBP
RUNX3_BCL11A	-0.339	RUNX3 BCL11A
GCM1	-0.339	GCM1
HOXC12_HOXD12	-0.340	HOXC12 HOXD12
HESX1	-0.347	HESX1
GUAACAG	-0.350	hsa-miR-194-5p
RFX5	-0.350	RFX5
HOXB5	-0.359	HOXB5
CACAGUG	-0.361	hsa-miR-128-3p hsa-miR-216a-3p hsa-miR-3681-3p
VENTX	-0.364	VENTX
NFIL3	-0.368	NFIL3
HINFP	-0.371	HINFP
AGUGCAA	-0.380	hsa-miR-130a-3p hsa-miR-130b-3p hsa-miR-301a-3p hsa-miR-301b-3p hsa-miR-454-3p hsa-miR-3666 hsa-miR-4295
NKX3-2	-0.383	NKX3-2
HOXA10_HOXB9	-0.392	HOXA10 HOXB9
GUAGUGU	-0.401	hsa-miR-142-3p.1
HOXB3	-0.403	HOXB3
CREB1	-0.411	CREB1
PROX1	-0.414	PROX1
TFCP2	-0.414	TFCP2
SHOX	-0.427	SHOX SHOX
UUGUUCG	-0.430	hsa-miR-375
MEIS3_TGIF2LX	-0.431	MEIS3 TGIF2LX
ZNF232	-0.432	ZNF232
CREB3L2	-0.435	CREB3L2
NFIA	-0.437	NFIA
GRHL1	-0.437	GRHL1
MIXL1_GSX1_BSX_MEOX2_LHX4	-0.443	MIXL1 GSX1 BSX MEOX2 LHX4
TFAP2E	-0.447	TFAP2E
UCACAGU	-0.448	hsa-miR-27a-3p hsa-miR-27b-3p
RBPJ	-0.454	RBPJ
CLOCK	-0.456	CLOCK
GCAGCAU	-0.465	hsa-miR-103a-3p hsa-miR-107
BHLHE22_BHLHA15_BHLHE23	-0.466	BHLHE22 BHLHA15 BHLHE23
KLF14_SP8	-0.467	KLF14 SP8
HOXC9	-0.470	HOXC9
GZF1	-0.472	GZF1
UAAGGCA	-0.473	hsa-miR-124-3p.2 hsa-miR-506-3p
NR1H4	-0.480	NR1H4
AHR_ARNT2	-0.500	AHR ARNT2
GGCAGUG	-0.509	hsa-miR-34a-5p hsa-miR-34c-5p hsa-miR-449a hsa-miR-449b-5p
ACAGUAU	-0.510	hsa-miR-144-3p
HSF2	-0.510	HSF2
SCRT1_SCRT2	-0.514	SCRT1 SCRT2
TGIF1	-0.518	TGIF1
PKNOX1_TGIF2	-0.521	PKNOX1 TGIF2
GGCUCAG	-0.523	hsa-miR-24-3p
AAGGUGC	-0.523	hsa-miR-18a-5p hsa-miR-18b-5p hsa-miR-4735-3p
SPDEF	-0.524	SPDEF
HOXB13	-0.525	HOXB13
CCCUGAG	-0.526	hsa-miR-125a-5p hsa-miR-125b-5p hsa-miR-4319
EP300	-0.530	EP300
SPIC	-0.532	SPIC
HOXC10_HOXD13	-0.533	HOXC10 HOXD13
ONECUT2_ONECUT3	-0.535	ONECUT2 ONECUT3
TBX19	-0.535	TBX19
ZNF143	-0.536	ZNF143
FOSB	-0.539	FOSB
KLF7	-0.540	KLF7
PPARG	-0.544	PPARG
TBX3	-0.544	TBX3
AGCCCUU	-0.555	hsa-miR-129-1-3p hsa-miR-129-2-3p
HIVEP1	-0.555	HIVEP1
EMX2	-0.557	EMX2
HOXD9	-0.560	HOXD9
UGGUCCC	-0.569	hsa-miR-133a-3p.1
BHLHE40	-0.569	BHLHE40
NR2E3	-0.571	NR2E3
CDX2	-0.574	CDX2
GGCAAGA	-0.574	hsa-miR-31-5p
HOXA4	-0.574	HOXA4
STAT5B	-0.578	STAT5B
ZNF350	-0.585	ZNF350
ZBTB16	-0.588	ZBTB16
PAX6	-0.603	PAX6
TEAD3_TEAD1	-0.617	TEAD3 TEAD1
MAFA	-0.629	MAFA
NKX2-8	-0.632	NKX2-8
UCCAGUU	-0.634	hsa-miR-145-5p hsa-miR-5195-3p
AUGGCUU	-0.642	hsa-miR-135a-5p hsa-miR-135b-5p
GATA6	-0.644	GATA6
UUGGUCC	-0.644	hsa-miR-133a-3p.2 hsa-miR-133b
ATF2_ATF1_ATF3	-0.648	ATF2 ATF1 ATF3
AAUACUG	-0.656	hsa-miR-200b-3p hsa-miR-200c-3p hsa-miR-429
STAT5A	-0.684	STAT5A
SOX7	-0.693	SOX7 SOX7
ZBTB7A_ZBTB7C	-0.697	ZBTB7A ZBTB7C
FOXD3_FOXI1_FOXF1	-0.701	FOXD3 FOXI1 FOXF1
VAX1_GSX2	-0.704	VAX1 GSX2
AGCUGCC	-0.709	hsa-miR-22-3p
SPI1	-0.711	SPI1
LHX2	-0.735	LHX2
ACAGUAC	-0.735	hsa-miR-101-3p.1
CEBPE_CEBPD	-0.740	CEBPE CEBPD
HBP1	-0.746	HBP1
NFE2L1	-0.746	NFE2L1
E2F2_E2F5	-0.747	E2F2 E2F5
GLI3	-0.761	GLI3
SIX6	-0.769	SIX6
JUN	-0.793	JUN
POU4F1_POU4F3	-0.798	POU4F1 POU4F3
ZNF740_ZNF219	-0.800	ZNF740 ZNF219
AGUGCUU	-0.801	hsa-miR-302c-3p.2 hsa-miR-520f-3p
ZNF652	-0.803	ZNF652
FUBP1	-0.812	FUBP1
FLI1	-0.820	FLI1
RREB1	-0.821	RREB1
NFATC1	-0.834	NFATC1
POU3F2	-0.845	POU3F2
MBD2	-0.846	MBD2
JUND	-0.863	JUND
ARID3A	-0.878	ARID3A
AGCAGCG	-0.885	hsa-miR-503-5p
TP53	-0.895	TP53
UCACAUU	-0.896	hsa-miR-23a-3p hsa-miR-23b-3p hsa-miR-23c hsa-miR-130a-5p
DLX4_HOXD8	-0.897	DLX4 HOXD8
KLF6	-0.901	KLF6
TCF21	-0.904	TCF21
GTF2I	-0.912	GTF2I
TBX2	-0.913	TBX2
FIGLA	-0.929	FIGLA
ZBTB14	-0.942	ZBTB14
CCAGUGU	-0.942	hsa-miR-199a-5p hsa-miR-199b-5p
AUUGCAC	-0.954	hsa-miR-25-3p hsa-miR-32-5p hsa-miR-92a-3p hsa-miR-92b-3p hsa-miR-363-3p hsa-miR-367-3p
SOX3_SOX2	-0.967	SOX3 SOX2
RARA	-0.974	RARA
TCF12_ASCL2	-0.983	TCF12 ASCL2
AACACUG	-1.004	hsa-miR-141-3p hsa-miR-200a-3p
STAT4	-1.026	STAT4
VDR	-1.038	VDR
ZIC3_ZIC4	-1.044	ZIC3 ZIC4
SRF	-1.050	SRF
HOXB4_LHX9	-1.052	HOXB4 LHX9
MESP1	-1.107	MESP1
JDP2	-1.117	JDP2
CEBPB	-1.118	CEBPB
RFX7_RFX4_RFX1	-1.123	RFX7 RFX4 RFX1
DPRX	-1.124	DPRX
MAFB	-1.131	MAFB
FOXM1_TBL1XR1	-1.132	FOXM1 TBL1XR1
BACH2	-1.137	BACH2
EGR3_EGR2	-1.143	EGR3 EGR2
UAGUGUU	-1.153
CEBPG	-1.172	CEBPG
HOXB2_UNCX_HOXD3	-1.177	HOXB2 UNCX HOXD3
CAGUGCA	-1.182	hsa-miR-148a-3p hsa-miR-148b-3p hsa-miR-152-3p
GGAAUGU	-1.186	hsa-miR-1-3p hsa-miR-206 hsa-miR-613
MEIS2	-1.208	MEIS2
IRX3	-1.213	IRX3
KLF1	-1.236	KLF1
PRRX1_ALX4_PHOX2A	-1.257	PRRX1 ALX4 PHOX2A
RHOXF1	-1.260	RHOXF1
CUUUGGU	-1.270	hsa-miR-9-5p
NFKB1	-1.280	NFKB1
ZNF711_TFAP2A_TFAP2D	-1.294	ZNF711 TFAP2A TFAP2D
NRF1	-1.307	NRF1
ACAUUCA	-1.321	hsa-miR-181a-5p hsa-miR-181b-5p hsa-miR-181c-5p hsa-miR-181d-5p hsa-miR-4262
ELF3_EHF	-1.325	ELF3 EHF
RAD21_SMC3	-1.327	RAD21 SMC3
INSM1	-1.344	INSM1
NKX2-6	-1.455	NKX2-6
REL	-1.455	REL
AAGUGCU	-1.473	hsa-miR-302a-3p hsa-miR-302b-3p hsa-miR-302c-3p.1 hsa-miR-302d-3p hsa-miR-302e hsa-miR-372-3p hsa-miR-373-3p hsa-miR-520a-3p hsa-miR-520b hsa-miR-520c-3p hsa-miR-520d-3p hsa-miR-520e
ELK4_ETV5_ELK1_ELK3_ELF4	-1.476	ELK4 ETV5 ELK1 ELK3 ELF4
NFKB2	-1.561	NFKB2
PAX7_NOBOX	-1.612	PAX7 NOBOX
ATF6	-1.618	ATF6
ELF2_GABPA_ELF5	-1.627
MZF1	-1.675	MZF1
PAX5	-1.719	PAX5
TBX1	-1.735	TBX1
AGCAGCA	-1.745	hsa-miR-15a-5p hsa-miR-15b-5p hsa-miR-16-5p hsa-miR-195-5p hsa-miR-424-5p hsa-miR-497-5p hsa-miR-6838-5p
GUGCAAA	-1.757	hsa-miR-19a-3p hsa-miR-19b-3p
HSF4	-1.852	HSF4
ZNF148	-1.864	ZNF148
GAGGUAG	-1.902	hsa-let-7a-5p hsa-let-7b-5p hsa-let-7c-5p hsa-let-7d-5p hsa-let-7e-5p hsa-let-7f-5p hsa-let-7g-5p hsa-let-7i-5p hsa-miR-98-5p hsa-miR-4458 hsa-miR-4500
NKX2-2	-1.975	NKX2-2
GUAAACA	-2.174	hsa-miR-30a-5p hsa-miR-30b-5p hsa-miR-30c-5p hsa-miR-30d-5p hsa-miR-30e-5p
ETS1	-2.206	ETS1
EGR1_EGR4	-2.258	EGR1 EGR4
SMAD1	-2.275	SMAD1
MLX_USF2_USF1_PAX2	-2.276	MLX USF2 USF1 PAX2
E2F6	-2.315	E2F6
AAAGUGC	-2.361	hsa-miR-17-5p hsa-miR-20a-5p hsa-miR-20b-5p hsa-miR-93-5p hsa-miR-106a-5p hsa-miR-106b-5p hsa-miR-519d-3p hsa-miR-526b-3p
MECP2	-2.468	MECP2
MYB	-2.513	MYB
ZFX	-2.522	ZFX
FOSL2_SMARCC1	-2.673	FOSL2 SMARCC1
IRF6_IRF4_IRF5	-2.798	IRF6 IRF4 IRF5
IRF7	-2.864	IRF7
TAF1	-2.917	TAF1
TFDP1	-3.147	TFDP1
SP1	-3.405	SP1
SIN3A_CHD1	-3.507	SIN3A CHD1
BATF	-3.889	BATF
RELA	-3.917	RELA
IRF9	-4.450	IRF9
FOSL1	-4.540	FOSL1
IRF3	-8.227	IRF3
IRF2_STAT2_IRF8_IRF1	-14.895	IRF2 STAT2 IRF8 IRF1

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Sample name: hela.gfp.cas9.r3

Sorted z-values for every WM.