Enrichment in phenotype: ago1w6a (3 samples)
- 26 / 50 gene sets are upregulated in phenotype ago1w6a
- 17 gene sets are significant at FDR < 25%
- 13 gene sets are significantly enriched at nominal pvalue < 1%
- 16 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Enrichment in phenotype: ago1gfp (3 samples)
- 24 / 50 gene sets are upregulated in phenotype ago1gfp
- 14 gene sets are significantly enriched at FDR < 25%
- 8 gene sets are significantly enriched at nominal pvalue < 1%
- 11 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Dataset details
- The dataset has 13835 features (genes)
- No probe set => gene symbol collapsing was requested, so all 13835 features were used
Gene set details
- Gene set size filters (min=15, max=500) resulted in filtering out 0 / 50 gene sets
- The remaining 50 gene sets were used in the analysis
- List of gene sets used and their sizes (restricted to features in the specified dataset)
Gene markers for the ago1w6a versus ago1gfp comparison
- The dataset has 13835 features (genes)
- # of markers for phenotype ago1w6a: 6866 (49.6% ) with correlation area 46.8%
- # of markers for phenotype ago1gfp: 6969 (50.4% ) with correlation area 53.2%
- Detailed rank ordered gene list for all features in the dataset
- Heat map and gene list correlation profile for all features in the dataset
Global statistics and plots
Comments
- There were duplicate row identifiers in the specified dataset. One id was arbitarilly choosen. Details are below
Generally, this is OK, but if you want to avoid this automagic, edit your dataset so that all row ids are unique
# of row ids in original dataset: 13848
# of row UNIQUE ids in original dataset: 13835
# The duplicates were
ARHGAP11B
ARL17B
CC2D2B
RPP21
GTF2H2
RYBP
LCOR
CTAGE5
ERCC6
UVSSA
DCDC1
NBPF11
NHSL2
