Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1gfp
GeneSetKEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS
Enrichment Score (ES)-0.43692514
Normalized Enrichment Score (NES)-1.7548372
Nominal p-value0.0
FDR q-value0.019075574
FWER p-Value0.164
Table: GSEA Results Summary



Fig 1: Enrichment plot: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TRIM21NATRIM21
Entrez,  Source
tripartite motif-containing 212022.3880.0224No
2FCGR3ANAFCGR3A
Entrez,  Source
Fc fragment of IgG, low affinity IIIa, receptor (CD16a)4131.6860.0345No
3H3F3CNA10151.1110.0168No
4C5NAC5
Entrez,  Source
complement component 511221.0550.0257No
5TNFNATNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)12101.0150.0352No
6C8GNAC8G
Entrez,  Source
complement component 8, gamma polypeptide14050.9450.0377No
7ACTN1NAACTN1
Entrez,  Source
actinin, alpha 117550.8380.0302No
8H3F3BNAH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)19720.7930.0293No
9HIST1H3BNAHIST1H3B
Entrez,  Source
histone cluster 1, H3b22730.7290.0230No
10HIST1H2BLNAHIST1H2BL
Entrez,  Source
histone cluster 1, H2bl22950.7250.0320No
11ACTN4NAACTN4
Entrez,  Source
actinin, alpha 423210.7190.0407No
12TROVE2NATROVE2
Entrez,  Source
TROVE domain family, member 225580.6740.0371No
13FCGR2ANAFCGR2A
Entrez,  Source
Fc fragment of IgG, low affinity IIa, receptor (CD32)26450.6580.0416No
14HIST2H2ACNAHIST2H2AC
Entrez,  Source
histone cluster 2, H2ac26690.6540.0495No
15H2AFXNAH2AFX
Entrez,  Source
H2A histone family, member X28490.6230.0484No
16HIST2H3ANAHIST2H3A
Entrez,  Source
histone cluster 2, H3a30740.5850.0442No
17HLA-DOBNAHLA-DOB
Entrez,  Source
major histocompatibility complex, class II, DO beta31370.5770.0489No
18HIST1H2ALNAHIST1H2AL
Entrez,  Source
histone cluster 1, H2al36970.4980.0249No
19C8ANAC8A
Entrez,  Source
complement component 8, alpha polypeptide46370.388-0.0217No
20HIST3H2BBNAHIST3H2BB
Entrez,  Source
histone cluster 3, H2bb49800.353-0.0357No
21HLA-DPA1NAHLA-DPA1
Entrez,  Source
major histocompatibility complex, class II, DP alpha 150820.343-0.0365No
22C2NAC2
Entrez,  Source
complement component 251390.338-0.0348No
23CD40LGNACD40LG
Entrez,  Source
CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome)55450.300-0.0530No
24C9NAC9
Entrez,  Source
complement component 956650.290-0.0556No
25HLA-DRB4NAHLA-DRB4
Entrez,  Source
major histocompatibility complex, class II, DR beta 457330.284-0.0553No
26HIST1H2AJNAHIST1H2AJ
Entrez,  Source
histone cluster 1, H2aj57950.278-0.0547No
27H2AFYNAH2AFY
Entrez,  Source
H2A histone family, member Y62030.245-0.0739No
28HIST1H4GNAHIST1H4G
Entrez,  Source
histone cluster 1, H4g68260.194-0.1056No
29HIST1H2AKNAHIST1H2AK
Entrez,  Source
histone cluster 1, H2ak69010.188-0.1071No
30HIST1H4KNAHIST1H4K
Entrez,  Source
histone cluster 1, H4k70550.176-0.1131No
31H2BFMNAH2BFM
Entrez,  Source
H2B histone family, member M70670.176-0.1112No
32HIST3H2ANAHIST3H2A
Entrez,  Source
histone cluster 3, H2a72100.166-0.1167No
33HIST2H3DNAHIST2H3D
Entrez,  Source
histone cluster 2, H3d72420.164-0.1161No
34HIST1H3FNAHIST1H3F
Entrez,  Source
histone cluster 1, H3f73460.156-0.1196No
35HIST1H2BANAHIST1H2BA
Entrez,  Source
histone cluster 1, H2ba73960.151-0.1202No
36HIST1H3INAHIST1H3I
Entrez,  Source
histone cluster 1, H3i75340.142-0.1258No
37FCGR3BNAFCGR3B
Entrez,  Source
Fc fragment of IgG, low affinity IIIb, receptor (CD16b)78610.118-0.1422No
38HIST4H4NAHIST4H4
Entrez,  Source
histone cluster 4, H478770.117-0.1414No
39ELANENA81710.095-0.1563No
40C4ANAC4A
Entrez,  Source
complement component 4A (Rodgers blood group)84550.075-0.1710No
41H2AFY2NAH2AFY2
Entrez,  Source
H2A histone family, member Y291460.024-0.2089No
42CD28NACD28
Entrez,  Source
CD28 molecule92470.017-0.2142No
43C1QCNAC1QC
Entrez,  Source
complement component 1, q subcomponent, C chain94370.004-0.2246No
44HLA-DRB5NAHLA-DRB5
Entrez,  Source
major histocompatibility complex, class II, DR beta 595370.000-0.2301No
45C1QANAC1QA
Entrez,  Source
complement component 1, q subcomponent, A chain95810.000-0.2324No
46HIST1H2ABNAHIST1H2AB
Entrez,  Source
histone cluster 1, H2ab96200.000-0.2346No
47HIST1H2BINAHIST1H2BI
Entrez,  Source
histone cluster 1, H2bi9896-0.012-0.2496No
48HIST1H2BENAHIST1H2BE
Entrez,  Source
histone cluster 1, H2be10042-0.021-0.2574No
49SNRPBNASNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B110059-0.023-0.2579No
50HIST3H3NAHIST3H3
Entrez,  Source
histone cluster 3, H310562-0.051-0.2850No
51HLA-DQB1NAHLA-DQB1
Entrez,  Source
major histocompatibility complex, class II, DQ beta 110613-0.055-0.2870No
52CD40NACD40
Entrez,  Source
CD40 molecule, TNF receptor superfamily member 510873-0.070-0.3004No
53HIST1H4JNAHIST1H4J
Entrez,  Source
histone cluster 1, H4j10883-0.070-0.2999No
54HLA-DRB1NAHLA-DRB1
Entrez,  Source
major histocompatibility complex, class II, DR beta 110903-0.071-0.3000No
55HIST1H2AHNAHIST1H2AH
Entrez,  Source
histone cluster 1, H2ah11022-0.079-0.3054No
56C8BNAC8B
Entrez,  Source
complement component 8, beta polypeptide11187-0.090-0.3132No
57ACTN3NAACTN3
Entrez,  Source
actinin, alpha 311241-0.094-0.3148No
58HIST1H4CNAHIST1H4C
Entrez,  Source
histone cluster 1, H4c11248-0.095-0.3138No
59HLA-DQA1NAHLA-DQA1
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 111431-0.108-0.3224No
60H2AFB2NAH2AFB2
Entrez,  Source
H2A histone family, member B211673-0.130-0.3339No
61HIST1H3CNAHIST1H3C
Entrez,  Source
histone cluster 1, H3c12074-0.162-0.3538No
62FCGR2BNAFCGR2B
Entrez,  Source
Fc fragment of IgG, low affinity IIb, receptor (CD32)12103-0.164-0.3531No
63SNRPD1NASNRPD1
Entrez,  Source
small nuclear ribonucleoprotein D1 polypeptide 16kDa12116-0.166-0.3514No
64HIST1H4ANAHIST1H4A
Entrez,  Source
histone cluster 1, H4a12386-0.190-0.3636No
65HIST1H2BMNAHIST1H2BM
Entrez,  Source
histone cluster 1, H2bm12681-0.218-0.3769No
66HIST1H4INAHIST1H4I
Entrez,  Source
histone cluster 1, H4i12717-0.221-0.3757No
67C6NAC6
Entrez,  Source
complement component 613182-0.261-0.3978No
68FCGR1ANAFCGR1A
Entrez,  Source
Fc fragment of IgG, high affinity Ia, receptor (CD64)13208-0.263-0.3954No
69CD86NACD86
Entrez,  Source
CD86 molecule13386-0.280-0.4013No
70H2AFJNAH2AFJ
Entrez,  Source
H2A histone family, member J13544-0.295-0.4059No
71HIST1H4ENAHIST1H4E
Entrez,  Source
histone cluster 1, H4e13650-0.307-0.4074No
72C4BNAC4B
Entrez,  Source
complement component 4B (Childo blood group)13661-0.308-0.4036No
73HLA-DQA2NAHLA-DQA2
Entrez,  Source
major histocompatibility complex, class II, DQ alpha 213710-0.312-0.4019No
74HIST2H2BFNAHIST2H2BF
Entrez,  Source
histone cluster 2, H2bf13860-0.326-0.4055No
75H2AFVNAH2AFV
Entrez,  Source
H2A histone family, member V14238-0.372-0.4212No
76HIST1H3ENAHIST1H3E
Entrez,  Source
histone cluster 1, H3e14422-0.394-0.4258No
77HIST1H3ANAHIST1H3A
Entrez,  Source
histone cluster 1, H3a14487-0.404-0.4237No
78IFNGNAIFNG
Entrez,  Source
interferon, gamma14617-0.420-0.4249No
79HIST1H2BBNAHIST1H2BB
Entrez,  Source
histone cluster 1, H2bb14687-0.429-0.4227No
80HIST1H4BNAHIST1H4B
Entrez,  Source
histone cluster 1, H4b14844-0.454-0.4250No
81SSBNASSB
Entrez,  Source
Sjogren syndrome antigen B (autoantigen La)15061-0.484-0.4301Yes
82HIST1H2ADNAHIST1H2AD
Entrez,  Source
histone cluster 1, H2ad15153-0.496-0.4282Yes
83SNRPD3NASNRPD3
Entrez,  Source
small nuclear ribonucleoprotein D3 polypeptide 18kDa15227-0.506-0.4251Yes
84GRIN2ANAGRIN2A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2A15241-0.508-0.4187Yes
85HLA-DOANAHLA-DOA
Entrez,  Source
major histocompatibility complex, class II, DO alpha15257-0.511-0.4123Yes
86HIST1H2BNNAHIST1H2BN
Entrez,  Source
histone cluster 1, H2bn15302-0.515-0.4075Yes
87C7NAC7
Entrez,  Source
complement component 715400-0.532-0.4054Yes
88HIST1H3JNAHIST1H3J
Entrez,  Source
histone cluster 1, H3j15515-0.555-0.4040Yes
89HLA-DMBNAHLA-DMB
Entrez,  Source
major histocompatibility complex, class II, DM beta15525-0.556-0.3966Yes
90IL10NAIL10
Entrez,  Source
interleukin 1015556-0.562-0.3904Yes
91HIST2H2ABNAHIST2H2AB
Entrez,  Source
histone cluster 2, H2ab15581-0.568-0.3837Yes
92HIST1H3DNAHIST1H3D
Entrez,  Source
histone cluster 1, H3d15601-0.570-0.3768Yes
93GRIN2BNAGRIN2B
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate 2B15610-0.573-0.3692Yes
94ACTN2NAACTN2
Entrez,  Source
actinin, alpha 215627-0.577-0.3619Yes
95HIST1H2AGNAHIST1H2AG
Entrez,  Source
histone cluster 1, H2ag15683-0.587-0.3567Yes
96H2AFZNAH2AFZ
Entrez,  Source
H2A histone family, member Z15685-0.587-0.3486Yes
97HIST1H3HNAHIST1H3H
Entrez,  Source
histone cluster 1, H3h16379-0.758-0.3763Yes
98C3NAC3
Entrez,  Source
complement component 316387-0.761-0.3660Yes
99CD80NACD80
Entrez,  Source
CD80 molecule16598-0.825-0.3660Yes
100HIST2H2AA3NAHIST2H2AA3
Entrez,  Source
histone cluster 2, H2aa316667-0.844-0.3579Yes
101HIST2H4BNAHIST2H4B
Entrez,  Source
histone cluster 2, H4b16705-0.855-0.3479Yes
102HIST1H2AINAHIST1H2AI
Entrez,  Source
histone cluster 1, H2ai16706-0.856-0.3359Yes
103CTSGNACTSG
Entrez,  Source
cathepsin G16712-0.857-0.3241Yes
104HIST1H2BHNAHIST1H2BH
Entrez,  Source
histone cluster 1, H2bh16802-0.889-0.3166Yes
105HIST1H4DNAHIST1H4D
Entrez,  Source
histone cluster 1, H4d16833-0.900-0.3056Yes
106HIST1H2BKNAHIST1H2BK
Entrez,  Source
histone cluster 1, H2bk17001-0.968-0.3012Yes
107HLA-DPB1NAHLA-DPB1
Entrez,  Source
major histocompatibility complex, class II, DP beta 117189-1.052-0.2968Yes
108C1SNAC1S
Entrez,  Source
complement component 1, s subcomponent17205-1.061-0.2827Yes
109HIST1H3GNAHIST1H3G
Entrez,  Source
histone cluster 1, H3g17311-1.125-0.2727Yes
110HIST1H2BONAHIST1H2BO
Entrez,  Source
histone cluster 1, H2bo17423-1.203-0.2620Yes
111HIST1H2BJNAHIST1H2BJ
Entrez,  Source
histone cluster 1, H2bj17425-1.204-0.2451Yes
112HIST1H4HNAHIST1H4H
Entrez,  Source
histone cluster 1, H4h17454-1.222-0.2294Yes
113HIST1H2ACNAHIST1H2AC
Entrez,  Source
histone cluster 1, H2ac17490-1.251-0.2138Yes
114HIST1H2BDNAHIST1H2BD
Entrez,  Source
histone cluster 1, H2bd17578-1.319-0.2001Yes
115H3F3ANAH3F3A
Entrez,  Source
H3 histone, family 3A17585-1.328-0.1817Yes
116HIST1H2AMNAHIST1H2AM
Entrez,  Source
histone cluster 1, H2am17624-1.378-0.1644Yes
117HIST1H2AENAHIST1H2AE
Entrez,  Source
histone cluster 1, H2ae17737-1.512-0.1494Yes
118HIST1H2BGNAHIST1H2BG
Entrez,  Source
histone cluster 1, H2bg17786-1.593-0.1297Yes
119HIST1H2BFNAHIST1H2BF
Entrez,  Source
histone cluster 1, H2bf17879-1.799-0.1095Yes
120C1RNAC1R
Entrez,  Source
complement component 1, r subcomponent17902-1.865-0.0845Yes
121HIST1H2BCNAHIST1H2BC
Entrez,  Source
histone cluster 1, H2bc17920-1.910-0.0586Yes
122HIST2H2BENAHIST2H2BE
Entrez,  Source
histone cluster 2, H2be18004-2.281-0.0311Yes
123HLA-DMANAHLA-DMA
Entrez,  Source
major histocompatibility complex, class II, DM alpha18085-2.8490.0045Yes
Table: GSEA details [plain text format]



Fig 2: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS: Random ES distribution   
Gene set null distribution of ES for KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS