Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1w1a
GeneSetHALLMARK_IL6_JAK_STAT3_SIGNALING
Enrichment Score (ES)0.61692506
Normalized Enrichment Score (NES)2.2074645
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_IL6_JAK_STAT3_SIGNALING   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CXCL11NACXCL11
Entrez,  Source
chemokine (C-X-C motif) ligand 1104.8720.0581Yes
2CXCL10NACXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 10164.6310.1125Yes
3IL6NAIL6
Entrez,  Source
interleukin 6 (interferon, beta 2)174.5960.1674Yes
4CRLF2NACRLF2
Entrez,  Source
cytokine receptor-like factor 2304.4500.2198Yes
5IL2RGNAIL2RG
Entrez,  Source
interleukin 2 receptor, gamma (severe combined immunodeficiency)573.9550.2655Yes
6IRF1NAIRF1
Entrez,  Source
interferon regulatory factor 11123.0670.2991Yes
7CNTFRNACNTFR
Entrez,  Source
ciliary neurotrophic factor receptor1632.6050.3274Yes
8IL12RB1NAIL12RB1
Entrez,  Source
interleukin 12 receptor, beta 11782.5090.3566Yes
9TNFRSF12ANATNFRSF12A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 12A2032.3870.3838Yes
10TNFRSF21NATNFRSF21
Entrez,  Source
tumor necrosis factor receptor superfamily, member 212332.2500.4090Yes
11CSF2RANACSF2RA
Entrez,  Source
colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)4311.6520.4178Yes
12IL1R2NAIL1R2
Entrez,  Source
interleukin 1 receptor, type II4921.5510.4330Yes
13IRF9NA5021.5370.4508Yes
14CD44NACD44
Entrez,  Source
CD44 molecule (Indian blood group)5151.5230.4683Yes
15IL15RANAIL15RA
Entrez,  Source
interleukin 15 receptor, alpha5401.4950.4848Yes
16IL4RNAIL4R
Entrez,  Source
interleukin 4 receptor5471.4860.5022Yes
17TGFB1NATGFB1
Entrez,  Source
transforming growth factor, beta 1 (Camurati-Engelmann disease)5931.4250.5168Yes
18JUNNAJUN
Entrez,  Source
jun oncogene7181.3120.5256Yes
19TNFRSF1ANATNFRSF1A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1A7551.2790.5388Yes
20IL1BNAIL1B
Entrez,  Source
interleukin 1, beta7791.2620.5526Yes
21IL7NAIL7
Entrez,  Source
interleukin 78571.2050.5627Yes
22IL6STNAIL6ST
Entrez,  Source
interleukin 6 signal transducer (gp130, oncostatin M receptor)10011.1180.5681Yes
23TNFNATNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)12101.0150.5687Yes
24OSMRNAOSMR
Entrez,  Source
oncostatin M receptor14900.9120.5642Yes
25FASNAFAS
Entrez,  Source
Fas (TNF receptor superfamily, member 6)16000.8810.5687Yes
26IL1R1NAIL1R1
Entrez,  Source
interleukin 1 receptor, type I16020.8800.5791Yes
27CSF1NACSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)16080.8800.5893Yes
28LTBRNALTBR
Entrez,  Source
lymphotoxin beta receptor (TNFR superfamily, member 3)17510.8380.5915Yes
29ACVRL1NAACVRL1
Entrez,  Source
activin A receptor type II-like 119820.7910.5882Yes
30IL10RBNAIL10RB
Entrez,  Source
interleukin 10 receptor, beta19970.7890.5968Yes
31IL18R1NAIL18R1
Entrez,  Source
interleukin 18 receptor 121610.7520.5968Yes
32BAK1NABAK1
Entrez,  Source
BCL2-antagonist/killer 123660.7090.5940Yes
33SOCS1NASOCS1
Entrez,  Source
suppressor of cytokine signaling 124850.6860.5956Yes
34IL2RANAIL2RA
Entrez,  Source
interleukin 2 receptor, alpha26050.6650.5970Yes
35MYD88NAMYD88
Entrez,  Source
myeloid differentiation primary response gene (88)27590.6380.5961Yes
36IFNAR1NAIFNAR1
Entrez,  Source
interferon (alpha, beta and omega) receptor 128070.6300.6010Yes
37STAT1NASTAT1
Entrez,  Source
signal transducer and activator of transcription 1, 91kDa28540.6220.6059Yes
38CD14NACD14
Entrez,  Source
CD14 molecule29180.6100.6097Yes
39STAM2NASTAM2
Entrez,  Source
signal transducing adaptor molecule (SH3 domain and ITAM motif) 229200.6100.6169Yes
40IFNGR1NAIFNGR1
Entrez,  Source
interferon gamma receptor 131510.5750.6111No
41STAT3NASTAT3
Entrez,  Source
signal transducer and activator of transcription 3 (acute-phase response factor)33050.5500.6092No
42PTPN1NAPTPN1
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 135730.5140.6005No
43IL17RANAIL17RA
Entrez,  Source
interleukin 17 receptor A39350.4700.5862No
44TNFRSF1BNATNFRSF1B
Entrez,  Source
tumor necrosis factor receptor superfamily, member 1B41640.4390.5788No
45TLR2NATLR2
Entrez,  Source
toll-like receptor 246770.3850.5551No
46MAP3K8NAMAP3K8
Entrez,  Source
mitogen-activated protein kinase kinase kinase 847640.3760.5548No
47STAT2NASTAT2
Entrez,  Source
signal transducer and activator of transcription 2, 113kDa50310.3480.5442No
48HMOX1NAHMOX1
Entrez,  Source
heme oxygenase (decycling) 151180.3400.5435No
49ACVR1BNAACVR1B
Entrez,  Source
activin A receptor, type IB52070.3310.5426No
50PTPN2NAPTPN2
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 253430.3180.5390No
51SOCS3NASOCS3
Entrez,  Source
suppressor of cytokine signaling 354280.3100.5380No
52IL9RNAIL9R
Entrez,  Source
interleukin 9 receptor54680.3060.5395No
53CD38NACD38
Entrez,  Source
CD38 molecule64760.2230.4865No
54HAX1NAHAX1
Entrez,  Source
HCLS1 associated protein X-166180.2100.4812No
55IFNGR2NAIFNGR2
Entrez,  Source
interferon gamma receptor 2 (interferon gamma transducer 1)71180.1720.4556No
56CXCL13NACXCL13
Entrez,  Source
chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)78490.1190.4167No
57DNTTNADNTT
Entrez,  Source
deoxynucleotidyltransferase, terminal81630.0950.4005No
58LTBNALTB
Entrez,  Source
lymphotoxin beta (TNF superfamily, member 3)81970.0930.3998No
59CCL7NACCL7
Entrez,  Source
chemokine (C-C motif) ligand 782110.0920.4002No
60PF4NAPF4
Entrez,  Source
platelet factor 4 (chemokine (C-X-C motif) ligand 4)82630.0890.3984No
61CSF2RBNACSF2RB
Entrez,  Source
colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)84570.0750.3886No
62CSF2NACSF2
Entrez,  Source
colony stimulating factor 2 (granulocyte-macrophage)95750.0000.3269No
63PLA2G2ANAPLA2G2A
Entrez,  Source
phospholipase A2, group IIA (platelets, synovial fluid)10147-0.0290.2956No
64ITGA4NAITGA4
Entrez,  Source
integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)10392-0.0420.2826No
65CXCL9NACXCL9
Entrez,  Source
chemokine (C-X-C motif) ligand 910624-0.0550.2705No
66INHBENAINHBE
Entrez,  Source
inhibin, beta E10656-0.0580.2695No
67CXCL3NACXCL3
Entrez,  Source
chemokine (C-X-C motif) ligand 310925-0.0730.2555No
68PIK3R5NAPIK3R5
Entrez,  Source
phosphoinositide-3-kinase, regulatory subunit 5, p10111049-0.0810.2497No
69CXCL1NACXCL1
Entrez,  Source
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)11070-0.0820.2496No
70CSF3RNACSF3R
Entrez,  Source
colony stimulating factor 3 receptor (granulocyte)11935-0.1500.2036No
71IL13RA1NAIL13RA1
Entrez,  Source
interleukin 13 receptor, alpha 111942-0.1510.2050No
72TYK2NATYK2
Entrez,  Source
tyrosine kinase 212261-0.1780.1896No
73CBLNACBL
Entrez,  Source
Cas-Br-M (murine) ecotropic retroviral transforming sequence12715-0.2200.1672No
74IL3RANAIL3RA
Entrez,  Source
interleukin 3 receptor, alpha (low affinity)13810-0.3220.1105No
75GRB2NAGRB2
Entrez,  Source
growth factor receptor-bound protein 214005-0.3450.1039No
76PTPN11NAPTPN11
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 11 (Noonan syndrome 1)14759-0.4380.0675No
77ITGB3NAITGB3
Entrez,  Source
integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)14763-0.4380.0725No
78PDGFCNAPDGFC
Entrez,  Source
platelet derived growth factor C14827-0.4510.0744No
79EBI3NAEBI3
Entrez,  Source
Epstein-Barr virus induced gene 315157-0.4970.0622No
80IL17RBNAIL17RB
Entrez,  Source
interleukin 17 receptor B15607-0.5720.0442No
81CD9NACD9
Entrez,  Source
CD9 molecule16232-0.7150.0182No
82LEPRNALEPR
Entrez,  Source
leptin receptor16372-0.7550.0195No
83CD36NACD36
Entrez,  Source
CD36 molecule (thrombospondin receptor)17086-1.007-0.0079No
84PIM1NAPIM1
Entrez,  Source
pim-1 oncogene17087-1.0070.0041No
85CCR1NACCR1
Entrez,  Source
chemokine (C-C motif) receptor 117913-1.895-0.0189No
86A2MNAA2M
Entrez,  Source
alpha-2-macroglobulin18074-2.7600.0051No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_IL6_JAK_STAT3_SIGNALING   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_IL6_JAK_STAT3_SIGNALING: Random ES distribution   
Gene set null distribution of ES for HALLMARK_IL6_JAK_STAT3_SIGNALING