Datasetw1a_vs_wt_vs_wt.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp.w1a_vs_wt.cls
#ago1w1a_versus_ago1gfp_repos
Phenotypew1a_vs_wt.cls#ago1w1a_versus_ago1gfp_repos
Upregulated in classago1gfp
GeneSetHALLMARK_BILE_ACID_METABOLISM
Enrichment Score (ES)-0.35718802
Normalized Enrichment Score (NES)-1.4158156
Nominal p-value0.016620498
FDR q-value0.08618684
FWER p-Value0.297
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_BILE_ACID_METABOLISM   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1BCAR3NABCAR3
Entrez,  Source
breast cancer anti-estrogen resistance 37911.254-0.0206No
2GCLMNAGCLM
Entrez,  Source
glutamate-cysteine ligase, modifier subunit8121.2380.0011No
3RXRGNARXRG
Entrez,  Source
retinoid X receptor, gamma8941.1790.0185No
4DIO1NADIO1
Entrez,  Source
deiodinase, iodothyronine, type I12271.0090.0187No
5NPC1NANPC1
Entrez,  Source
Niemann-Pick disease, type C113660.9570.0288No
6ABCA5NAABCA5
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 515230.9040.0368No
7PEX16NAPEX16
Entrez,  Source
peroxisomal biogenesis factor 1618640.8160.0331No
8ABCD1NAABCD1
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 122740.7290.0239No
9CYP7A1NACYP7A1
Entrez,  Source
cytochrome P450, family 7, subfamily A, polypeptide 126190.6630.0171No
10RETSATNARETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)28020.6300.0187No
11RXRANARXRA
Entrez,  Source
retinoid X receptor, alpha28350.6260.0284No
12ARNAAR
Entrez,  Source
androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)28500.6230.0392No
13ABCG4NAABCG4
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 430760.5850.0375No
14SLC27A2NASLC27A2
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 234930.5230.0242No
15NEDD4NANEDD4
Entrez,  Source
neural precursor cell expressed, developmentally down-regulated 436910.4980.0224No
16NR0B2NANR0B2
Entrez,  Source
nuclear receptor subfamily 0, group B, member 236960.4980.0314No
17ALDH8A1NAALDH8A1
Entrez,  Source
aldehyde dehydrogenase 8 family, member A138280.4830.0331No
18ABCA6NAABCA6
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 638340.4820.0417No
19SLC29A1NASLC29A1
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 141910.4350.0300No
20FADS2NAFADS2
Entrez,  Source
fatty acid desaturase 243200.4200.0307No
21AMACRNAAMACR
Entrez,  Source
alpha-methylacyl-CoA racemase44800.4020.0293No
22CYP46A1NACYP46A1
Entrez,  Source
cytochrome P450, family 46, subfamily A, polypeptide 147980.3720.0187No
23BBOX1NABBOX1
Entrez,  Source
butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 148600.3660.0220No
24PEX12NAPEX12
Entrez,  Source
peroxisomal biogenesis factor 1248990.3620.0266No
25PAOXNAPAOX
Entrez,  Source
polyamine oxidase (exo-N4-amino)50890.3420.0225No
26MLYCDNAMLYCD
Entrez,  Source
malonyl-CoA decarboxylase50930.3420.0286No
27HSD17B6NAHSD17B6
Entrez,  Source
hydroxysteroid (17-beta) dehydrogenase 651260.3390.0331No
28OPTNNAOPTN
Entrez,  Source
optineurin52600.3260.0318No
29LONP2NA52950.3230.0359No
30SULT1B1NASULT1B1
Entrez,  Source
sulfotransferase family, cytosolic, 1B, member 155350.3010.0282No
31PEX1NAPEX1
Entrez,  Source
peroxisome biogenesis factor 156820.2880.0255No
32HAO1NAHAO1
Entrez,  Source
hydroxyacid oxidase (glycolate oxidase) 161730.2480.0029No
33LCKNALCK
Entrez,  Source
lymphocyte-specific protein tyrosine kinase66350.208-0.0188No
34CYP8B1NACYP8B1
Entrez,  Source
cytochrome P450, family 8, subfamily B, polypeptide 168650.191-0.0280No
35CROTNACROT
Entrez,  Source
carnitine O-octanoyltransferase69030.188-0.0265No
36ACSL5NAACSL5
Entrez,  Source
acyl-CoA synthetase long-chain family member 569330.185-0.0247No
37HSD3B7NAHSD3B7
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 778190.121-0.0715No
38PEX6NAPEX6
Entrez,  Source
peroxisomal biogenesis factor 678870.116-0.0731No
39RBP1NARBP1
Entrez,  Source
retinol binding protein 1, cellular79480.111-0.0743No
40AKR1D1NAAKR1D1
Entrez,  Source
aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)79650.110-0.0732No
41GNPATNAGNPAT
Entrez,  Source
glyceronephosphate O-acyltransferase80280.105-0.0747No
42ABCA4NAABCA4
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 480690.102-0.0750No
43DIO2NADIO2
Entrez,  Source
deiodinase, iodothyronine, type II81000.099-0.0749No
44TTRNATTR
Entrez,  Source
transthyretin (prealbumin, amyloidosis type I)81770.094-0.0773No
45DHCR24NADHCR24
Entrez,  Source
24-dehydrocholesterol reductase82330.091-0.0787No
46SLC23A2NASLC23A2
Entrez,  Source
solute carrier family 23 (nucleobase transporters), member 282580.089-0.0784No
47PHYHNAPHYH
Entrez,  Source
phytanoyl-CoA 2-hydroxylase83680.081-0.0829No
48GSTK1NAGSTK1
Entrez,  Source
glutathione S-transferase kappa 185110.071-0.0895No
49CYP27A1NACYP27A1
Entrez,  Source
cytochrome P450, family 27, subfamily A, polypeptide 187770.052-0.1032No
50ABCD2NAABCD2
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 289920.035-0.1144No
51SLC35B2NASLC35B2
Entrez,  Source
solute carrier family 35, member B289970.035-0.1140No
52PEX11ANAPEX11A
Entrez,  Source
peroxisomal biogenesis factor 11A90430.032-0.1159No
53ABCA8NAABCA8
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 894220.005-0.1367No
54PRDX5NAPRDX5
Entrez,  Source
peroxiredoxin 594700.003-0.1393No
55CYP7B1NACYP7B1
Entrez,  Source
cytochrome P450, family 7, subfamily B, polypeptide 19823-0.008-0.1586No
56PXMP2NAPXMP2
Entrez,  Source
peroxisomal membrane protein 2, 22kDa9908-0.013-0.1630No
57SERPINA6NASERPINA6
Entrez,  Source
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 69983-0.018-0.1668No
58PEX19NAPEX19
Entrez,  Source
peroxisomal biogenesis factor 1910008-0.018-0.1678No
59HSD17B11NA10104-0.026-0.1725No
60GNMTNAGNMT
Entrez,  Source
glycine N-methyltransferase10117-0.027-0.1727No
61FDXRNAFDXR
Entrez,  Source
ferredoxin reductase10185-0.030-0.1759No
62LIPENALIPE
Entrez,  Source
lipase, hormone-sensitive10196-0.031-0.1758No
63CH25HNACH25H
Entrez,  Source
cholesterol 25-hydroxylase10820-0.066-0.2091No
64PNPLA8NAPNPLA8
Entrez,  Source
patatin-like phospholipase domain containing 810963-0.075-0.2156No
65ABCG8NAABCG8
Entrez,  Source
ATP-binding cassette, sub-family G (WHITE), member 8 (sterolin 2)11094-0.084-0.2213No
66SLCO1A2NASLCO1A2
Entrez,  Source
solute carrier organic anion transporter family, member 1A211123-0.086-0.2212No
67GCNAGC
Entrez,  Source
group-specific component (vitamin D binding protein)11249-0.095-0.2264No
68ABCA9NAABCA9
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 911865-0.145-0.2578No
69SLC27A5NASLC27A5
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 511946-0.151-0.2594No
70FADS1NAFADS1
Entrez,  Source
fatty acid desaturase 112002-0.156-0.2596No
71ALDH1A1NAALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A112537-0.205-0.2854No
72TFCP2L1NATFCP2L1
Entrez,  Source
transcription factor CP2-like 112640-0.214-0.2871No
73KLF1NAKLF1
Entrez,  Source
Kruppel-like factor 1 (erythroid)12670-0.217-0.2847No
74SOAT2NASOAT2
Entrez,  Source
sterol O-acyltransferase 212762-0.225-0.2855No
75PEX26NAPEX26
Entrez,  Source
peroxisome biogenesis factor 2612776-0.226-0.2821No
76APOA1NAAPOA1
Entrez,  Source
apolipoprotein A-I13168-0.259-0.2990No
77HACL1NAHACL1
Entrez,  Source
2-hydroxyacyl-CoA lyase 113173-0.260-0.2944No
78PFKMNAPFKM
Entrez,  Source
phosphofructokinase, muscle13622-0.305-0.3136No
79PEX13NAPEX13
Entrez,  Source
peroxisome biogenesis factor 1313856-0.326-0.3204No
80EPHX2NAEPHX2
Entrez,  Source
epoxide hydrolase 2, cytoplasmic13870-0.327-0.3151No
81NR1H4NANR1H4
Entrez,  Source
nuclear receptor subfamily 1, group H, member 413880-0.328-0.3096No
82SOD1NASOD1
Entrez,  Source
superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))13992-0.344-0.3093No
83ALDH9A1NAALDH9A1
Entrez,  Source
aldehyde dehydrogenase 9 family, member A113994-0.345-0.3030No
84HSD17B4NAHSD17B4
Entrez,  Source
hydroxysteroid (17-beta) dehydrogenase 414216-0.369-0.3085No
85SLC22A18NASLC22A18
Entrez,  Source
solute carrier family 22 (organic cation transporter), member 1814235-0.370-0.3026No
86ISOC1NAISOC1
Entrez,  Source
isochorismatase domain containing 114630-0.422-0.3166No
87SCP2NASCP2
Entrez,  Source
sterol carrier protein 215228-0.506-0.3403No
88IDH1NAIDH1
Entrez,  Source
isocitrate dehydrogenase 1 (NADP+), soluble15361-0.527-0.3379No
89NR1I2NANR1I2
Entrez,  Source
nuclear receptor subfamily 1, group I, member 215389-0.531-0.3296No
90NUDT12NANUDT12
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 1215888-0.631-0.3455Yes
91PEX7NAPEX7
Entrez,  Source
peroxisomal biogenesis factor 715992-0.654-0.3391Yes
92ABCD3NAABCD3
Entrez,  Source
ATP-binding cassette, sub-family D (ALD), member 316108-0.682-0.3329Yes
93EFHC1NAEFHC1
Entrez,  Source
EF-hand domain (C-terminal) containing 116122-0.686-0.3209Yes
94BMP6NABMP6
Entrez,  Source
bone morphogenetic protein 616261-0.723-0.3152Yes
95ABCA3NAABCA3
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 316288-0.730-0.3032Yes
96ABCA2NAABCA2
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 216614-0.831-0.3058Yes
97NR3C2NANR3C2
Entrez,  Source
nuclear receptor subfamily 3, group C, member 216687-0.850-0.2941Yes
98PEX11GNAPEX11G
Entrez,  Source
peroxisomal biogenesis factor 11 gamma16923-0.936-0.2898Yes
99PECRNAPECR
Entrez,  Source
peroxisomal trans-2-enoyl-CoA reductase16941-0.944-0.2733Yes
100HSD3B1NAHSD3B1
Entrez,  Source
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 116953-0.949-0.2564Yes
101AQP9NAAQP9
Entrez,  Source
aquaporin 917009-0.974-0.2414Yes
102IDI1NAIDI1
Entrez,  Source
isopentenyl-diphosphate delta isomerase 117064-0.996-0.2260Yes
103CATNACAT
Entrez,  Source
catalase17167-1.043-0.2124Yes
104AGXTNAAGXT
Entrez,  Source
alanine-glyoxylate aminotransferase (oxalosis I; hyperoxaluria I; glycolicaciduria; serine-pyruvate aminotransferase)17227-1.076-0.1958Yes
105CYP39A1NACYP39A1
Entrez,  Source
cytochrome P450, family 39, subfamily A, polypeptide 117404-1.192-0.1835Yes
106SLC23A1NASLC23A1
Entrez,  Source
solute carrier family 23 (nucleobase transporters), member 117663-1.429-0.1714Yes
107ATXN1NAATXN1
Entrez,  Source
ataxin 117686-1.455-0.1457Yes
108SULT2B1NASULT2B1
Entrez,  Source
sulfotransferase family, cytosolic, 2B, member 117782-1.584-0.1217Yes
109PIPOXNAPIPOX
Entrez,  Source
pipecolic acid oxidase17785-1.592-0.0924Yes
110ACSL1NAACSL1
Entrez,  Source
acyl-CoA synthetase long-chain family member 117864-1.764-0.0641Yes
111IDH2NAIDH2
Entrez,  Source
isocitrate dehydrogenase 2 (NADP+), mitochondrial17869-1.770-0.0316Yes
112ABCA1NAABCA1
Entrez,  Source
ATP-binding cassette, sub-family A (ABC1), member 118056-2.6020.0061Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_BILE_ACID_METABOLISM   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_BILE_ACID_METABOLISM: Random ES distribution   
Gene set null distribution of ES for HALLMARK_BILE_ACID_METABOLISM