XPRESStools

About

XPRESStools is a part of the XPRESSyourself suite of sequencing tools. XPRESStools is a Python toolkit for navigating and analyzing gene expression (Microarray or RNAseq) datasets. Features include the ability to import GEO-accessible datasets and metadata or your own datasets, clean, normalize, and analyze sequence data.

XPRESStools and the XPRESSyourself suite is developed and maintained by Jordan Berg in the Rutter Lab @ the University of Utah, along with other collaborators.

Table of contents

• Wait! I’ve never programmed before!
• Installation
• General Usage
• Retrieving Data
• Normalization and Quality Control
• Analysis
• Reference Building

License

XPRESStools is freely available under a GNU General Public License (v3.0).

Questions?

If you have questions, requests, or bugs to report, please use the Github issues forum.