Installation

PyPi Install

1) Install XPRESStools and associated dependencies via pip:

$ pip install xpresstools

Conda Install

This feature is not yet available…

1) Install XPRESStools and associated dependencies via conda:

$ conda install -y -c bioconda xpresstools

Manual install

1) Or download XPRESStools manually:

$ git clone https://github.com/XPRESSyourself/xpresstools.git
$ cd XPRESStools
$ cd python setup.py install

2) Or, to download specific version:

$ tag='v0.0.1-beta'
$ wget https://github.com/XPRESSyourself/XPRESStools/archive/$tag.zip
$ unzip xpresstools-${tag:1}.zip
$ mv xpresstools-${tag:1} xpresstools
$ cd xpresstools
$ cd python setup.py install

3) At the end of the installation instructions, an installation location will be given. Add this to your $PATH:

...
Installing xpresstools script to /Users/$USERNAME/anaconda3/bin

Installed /Users/$USERNAME/anaconda3/lib/python3.6/site-packages/xpresstools-0.0.1b0-py3.6.egg
Processing dependencies for XPRESStools==0.0.1b0
Finished processing dependencies for XPRESStools==0.0.1b0

$ echo "export PATH='/Users/$USERNAME/anaconda3/bin:$PATH' >> ~/.bash_profile