
! inlist_project 

! contains the parameters controlling this job

! for the sake of future readers of this (yourself included),
! ONLY include the controls you are actually using.
! DO NOT include all of the other controls that
! simply have their default values.



&star_job

      mesa_data_dir = '/Users/bpaxton/mesa/data'                                  ! << edit this
      
      
      create_pre_main_sequence_model = .true.

      change_net = .true. ! switch nuclear reaction network
      new_net_name = 'o18_and_ne22.net'

      eos_file_prefix = 'mesa'
      kappa_file_prefix = 'gs98'
      
      pgstar_flag = .true.

/ !end of star_job

&controls

   !max_model_number = 15
   
  ! starting specifications
      initial_mass = 3d0 ! in Msun units
      initial_Z = 0.0
      initial_Y = 0.25
   
   ! output to files and terminal
      photostep = 50
      profile_interval = 50
      log_cnt = 1
      terminal_cnt = 10
      write_header_frequency = 10

  ! mass gain or loss
      RGB_wind_scheme = 'Reimers'
      AGB_wind_scheme = 'Blocker'
      RGB_to_AGB_wind_switch = 1d-4
      Reimers_wind_eta = 0.8d0  
      Blocker_wind_eta = 0.5d0  

  ! when to stop
      xa_central_lower_limit_species(1) = 'he4'
      xa_central_lower_limit(1) = 1d-12
         ! stop when the center abundance by mass of he4 drops below this limit.

/


&pgstar
         
      ! top level controls

         !pause = .true. 
            ! if true, the code waits for user to enter a RETURN on the command line
      
      ! main window
      
         MAIN_win_flag = .true.
         
         show_TRho_Profile_with_main = .true.
      
         show_HR_TRho_with_main = .true. ! if false, use aspect ratio > 1
         MAIN_win_width = 8
         MAIN_win_aspect_ratio = 1.2 ! aspect_ratio = height/width
      
         xaxis_by = 'by_mass' ! select xaxis for main window
            
         show_main_win_text_info = .true.
         
         ! xaxis limits -- to override system default selections
         !main_xmin = -12 !0.4
         !main_xmax = 0.5
         
         logxq_cutoff = -12.1 ! min value when using logxm for xaxis
         !main_logL_max = 7
         !main_logL_min = 0
         
         ! control for plot showing abundances
         log_mass_frac_ymax = 0.7 ! making this > 0 helps readability
         log_mass_frac_ymin = -7.5
         num_abundance_line_labels = 5
      
         log_abund_vary = 0.1 ! don't show species if it would vary by < this in plot
      
         ! file output
         !MAIN_file_flag = .true.
         MAIN_file_dir = 'png'
         MAIN_file_prefix = 'main'
         MAIN_file_cnt = 2 ! output when mod(model_number,main_file_cnt)==0
               
               
      ! TRho Profile window -- current model in T-Rho plane
      
         TRho_Profile_win_flag = .false.

         TRho_Profile_win_width = 7.5
         TRho_Profile_win_aspect_ratio = 0.618 ! aspect_ratio = height/width
            
         show_TRho_Profile_text_info = .false.
         show_TRho_Profile_legend = .true.
         show_HR_TRho_with_TRho_Profile = .false.
         show_TRho_Profile_burn_labels = .true.
         TRho_Profile_show_logQ_limit = .true.
         !show_TRho_Profile_cross_hair = .true.
         show_TRho_Profile_mass_locs = .false.

         show_TRho_Profile_kap_regions = .false.
         show_TRho_Profile_eos_regions = .true.
         show_TRho_Profile_degeneracy_line = .true.
         show_TRho_Profile_Pgas_Prad_line = .true.
         show_TRho_Profile_burn_lines = .true.

         !show_TRho_Profile_annotation1 = .true.
         !show_TRho_Profile_annotation2 = .true.
         !show_TRho_Profile_annotation3 = .true.
      
         ! axis limits
         TRho_Profile_xmin = -10
         TRho_Profile_xmax = 10
         TRho_Profile_ymin = 3.0
         TRho_Profile_ymax = 10
         
         ! file output
         !TRho_Profile_file_flag = .true.
         TRho_Profile_file_dir = 'png'
         TRho_Profile_file_prefix = 'trho_profile'
         TRho_Profile_file_cnt = 2 ! output when mod(model_number,TRho_Profile_file_cnt)==0
      
      
      ! Profile window
      
         Profile_win_flag = .false.

         Profile_win_width = 7.5
         Profile_win_aspect_ratio = 0.618 ! aspect_ratio = height/width
            
         show_Profile_legend = .false.
         Profile_legend_coord = 0.65
         Profile_legend_fjust = 0.0
         Profile_legend_disp1 = -7.5
         Profile_legend_del_disp = -1.5
         Profile_show_mass_locs = .false.
         Profile_show_decorated_line = .false.
         
         show_HR_TRho_with_Profile = .false.
         show_Profile_text_info = .false.
         Profile_text_info_xfac = 0.78 ! controls x location
         Profile_text_info_dxfac = 0.02 ! controls x spacing to value from text
         Profile_text_info_yfac = 0.95 ! controls y location of 1st line
         Profile_text_info_dyfac = -0.04 ! controls line spacing
         show_Profile_cross_hair = .false.

         show_Profile_annotation1 = .false.
         show_Profile_annotation2 = .false.
         show_Profile_annotation3 = .false.
         
         ! axis choices
            ! to get a list of axis identifiers, edit your star_job controls
               ! to set show_profile_column_numbers = .true.
            ! you can use any identifier for x or y
         Profile_xaxis_name = 'logxm'
         Profile_xaxis_reversed = .true.
         Profile_xmin = -12 ! only used if > -100
         !Profile_xmax = 1.2 !-101 ! only used if > -100
         
         Profile_yaxis_name = 'entropy' !'grada'
         Profile_yaxis_reversed = .false.
         Profile_ymin = -111 !5.4 ! only used if > -100
         Profile_ymax = -111 !8.6 ! only used if > -100    
         Profile_dymin = 0.025    
         
         Profile_other_yaxis_name = 'logL'
         Profile_other_yaxis_reversed = .false.
         Profile_other_ymin = -101 ! only used if > -100
         Profile_other_ymax = -101 ! only used if > -100        
         
         ! file output
         !Profile_file_flag = .true.
         Profile_file_dir = 'png'
         Profile_file_prefix = 'profile'
         Profile_file_cnt = 5 ! output when mod(model_number,Profile_file_cnt)==0
      
      
      ! Convection window -- history of convection and more.
      
         CONV_win_flag = .true.
      
         CONV_win_width = 9
         CONV_win_aspect_ratio = 0.62 ! aspect_ratio = height/width
      
         ! axis limits
         CONV_xmax = -1 ! step number.  negative means use default.
         CONV_xmin = -1 ! step number.  negative means use default.
         CONV_max_width = 0 ! only used if > 0.  causes xmin to move with xmax.
         CONV_mmax = -1 ! (Msun units) negative means use start initial mass
         CONV_mmin = 0 ! (Msun units)
         CONV_lgLmax = -101 ! only used if > -100; (L in Lsun units)
         CONV_lgLmin = -2 ! only used if > -100; (L in Lsun units)

         CONV_show_burn = .true.
         CONV_show_mixing = .true.
         CONV_show_log_radius = .true.
         CONV_show_luminosities = .true.
         CONV_show_mass_boundaries = .true.

         show_CONV_annotation1 = .false.
         show_CONV_annotation2 = .false.
         show_CONV_annotation3 = .false.
         
         ! file output
         CONV_file_flag = .false.
         CONV_file_dir = 'pgstar_out'
         CONV_file_prefix = 'conv'
         CONV_file_cnt = 5 ! output when mod(model_number,CONV_file_cnt)==0
         CONV_file_width = -1 ! negative means use same value as for window
         CONV_file_aspect_ratio = -1 ! negative means use same value as for window
      
      
         
         
      ! Surface History window
      
         Surf_Hist_win_flag = .true.
      
         Surf_Hist_win_width = 6
         Surf_Hist_win_aspect_ratio = 1.5 ! aspect_ratio = height/width
      
         ! axis limits
         Surf_Hist_xmax = -1 ! step number.  negative means use default.
         Surf_Hist_xmin = -1 ! step number.  negative means use default.
         Surf_Hist_max_width = 0 ! only used if > 0.  causes xmin to move with xmax.
         
         ! abundance limits
         Surf_Hist_mass_frac_min = 0
         Surf_Hist_mass_frac_max = 1.1 ! > 0 helps legibility

         show_Surf_Hist_annotation1 = .false.
         show_Surf_Hist_annotation2 = .false.
         show_Surf_Hist_annotation3 = .false.
         
         ! file output
         Surf_Hist_file_flag = .false.
         Surf_Hist_file_dir = 'pgstar_out'
         Surf_Hist_file_prefix = 'conv'
         Surf_Hist_file_cnt = 5 ! output when mod(model_number,Surf_Hist_file_cnt)==0
         Surf_Hist_file_width = -1 ! negative means use same value as for window
         Surf_Hist_file_aspect_ratio = -1 ! negative means use same value as for window
      
         
         
      ! Power window
      
         Power_win_flag = .false.
      
         Power_win_width = 7.5
         Power_win_aspect_ratio = 0.618 ! aspect_ratio = height/width
      
         Power_xaxis_by = 'by_mass' ! select xaxis
         
         ! power xaxis limits -- to override system default selections
         Power_xmin = -101 ! only used if > -100
         Power_xmax = -101 ! only used if > -100
         
         ! power yaxis limits -- to override system default selections
         Power_ymin = -101 ! only used if > -100
         Power_ymax = -101 ! only used if > -100

         show_Power_cross_hair = .false.
         
         ! file output
         Power_file_flag = .false.
         Power_file_dir = 'pgstar_out'
         Power_file_prefix = 'power'
         Power_file_cnt = 5 ! output when mod(model_number,Power_file_cnt)==0
         Power_file_width = -1 ! negative means use same value as for window
         Power_file_aspect_ratio = -1 ! negative means use same value as for window
         
         
      ! Abundance window
      
         Abundance_win_flag = .true.
      
         Abundance_win_width = 9.0
         Abundance_win_aspect_ratio = 0.5 ! aspect_ratio = height/width
      
         Abundance_xaxis_by = 'by_logR'
         
         ! power xaxis limits -- to override system default selections
         Abundance_xmin = -101 ! only used if > -100
         Abundance_xmax = -101 ! only used if > -100
         
         ! power yaxis limits -- to override system default selections
         Abundance_log_mass_frac_min = 1 ! only used if < 0
         Abundance_log_mass_frac_max = 1 ! only used if < 0

         show_Abundance_cross_hair = .false.
         
         ! file output
         Abundance_file_flag = .false.
         Abundance_file_dir = 'pgstar_out'
         Abundance_file_prefix = 'abund'
         Abundance_file_cnt = 5 ! output when mod(model_number,Abundance_file_cnt)==0
         Abundance_file_width = -1 ! negative means use same value as for window
         Abundance_file_aspect_ratio = -1 ! negative means use same value as for window
         
         


/ ! end of pgstar namelist
