Get Heat Tree Parameters

This function get's the parameters used for the get_heat_tree_plots function.

get_heat_tree_parameters(obj, title, treatment_no, ...)

Arguments

obj	A metacoder object.
title	The title used in the heat_tree plot.
treatment_no	The number of treatment groups in the data.
...	Any of the heat tree parameters list below can be used to change the way the heat_tree output is displayed. However, this function acts as a default list of parameters. The memebers of the default list will be overridden by the dot parameters. Any variable in obj$data$stats_tax_data can be used to manipulate the heat tree parameters. Function calls from the taxa package must be done explicitely on the metacoder object.

Value

A list used with do.call and the metacoder::heat_tree function.

See also

heat_tree

n_obs, taxon_names

list_modify

enquos, is_quosure, eval_tidy

Other Visualizations: alpha_diversity_plot, correlation_plot, get_correlation_data, get_correlation_plots, get_heat_tree_plots, get_plot_limits, melt_metacoder, ordination_plot, save_barplot, save_correlation_plots, save_heat_tree_plots, save_ordination_plots, top_coefficients_barplot