 ComputeMatrixRx1_nodes | Computes rx1 matrix as in ComputeMatrixRx1_V2.m downloaded from |
| ST_Dstar | Calculate non-dimensional grain size D* |
| ST_d2phi | Convert sediment diameter (m) to phi |
| ST_erate | Calculate erosion rate in kg/(m^2-s) |
| ST_example | Example usage of Sediment Toolbox |
| ST_phi2d | Convert sediment grain size from phi to d (m) |
| ST_summary | Print summary for stats of particle diameter d (m) |
| ST_taucr | Calculate critical shear stress in Pascals (equivalent to N/m^2) |
| ST_wentworth | Report wentworth class of a particular grain size phi |
| ST_wset | Calculate settling velocity of particle diameter d (m) in m/s |
| SW_Density | SW_Density Density of sea water |
| SW_Kviscosity | Calculates the kinemtic viscosity [m^2/s] from the dynamic viscosity and |
| SW_Viscosity | SW_Viscosity Dynamic viscosity of seawater |
| Times2Datetime | TIMES2DATETIME Converts the 'Times' variable from a FVCOM output file to |
| Times2Matlab | TIMES2MATLAB Converts the 'Times' variable from a FVCOM output file to |
| calc_rad | Calculating instantaneous irradiance from cloud cover. |
| calc_scoord | %n=18;iesub=63;jesub=36; |
| catstruct | CATSTRUCT Concatenate or merge structures with different fieldnames |
| centroid | x and y must be non-scalar vectors of equal sizes defining a polygonal |
| check_wset | Calculate settling velocity of particle diameter d (m) in m/s |
| concat_by_struct | A function to concatenate data contained within a structure. |
| connectivity | CONNECTIVITY: Assemble connectivity data for a triangular mesh. |
| deg2utm | ------------------------------------------------------------------------- |
| densatp | densatp.m by: Edward T Peltzer, MBARI |
| depth2pressure | Pressure Computes pressure given the depth at some latitude |
| distance_along_BC | Calculates the distance from coast along the open boundary nodes |
| distance_to_coast | Calculates the distance from the coast in all mesh nodes |
| find_boundary_elements | Find the elements which fall along the boundary. |
| find_relaxation_boundary | Find the elements which fall along the boundary for a nested |
| fix_inside_boundary | Fix unstructured grid points inside the given boundary. |
| get_BADC_data | Child function to do the actual downloading from the BADC site via FTP. |
| get_NCEP_year | Extract the year from a give NCEP file name (either 'uwnd.sig995.YYYY.nc' |
| get_polcoms_fixed_vars | |
| get_polcoms_timeseriesv1 | ts_controlfile='/users/modellers/rito/Models/MEDINA/tseries.MEDI29' |
| get_runs | GET_RUNS Finds runs of continuous change in some value beyond some length |
| get_runs_test | Figure out a way to identify runs longer than some specified length for |
| ginput2 | GINPUT2 Graphical input from mouse with zoom, pan, plot and scaling. |
| greg2julian | This function converts the Gregorian dates to Julian dates. |
| greg2mjulian | mjulianday = greg2mjulian(yyyy,mm,dd,HH,MM,SS) |
| grid2fvcom | Interpolate regularly gridded surface forcing data onto a given FVCOM |
| grid_vert_interp | Child function to interpolate a given 3D array (x by y by sigma) values |
| gridvecs | clear all; close all; |
| inbox | determine if points lie in a box |
| inkmlbb | fname = 'Wet_Skagit_BB.kml'; |
| interpolate_near_coast | we should be using the law of the wall here s |
| interpolate_polcoms_timeseries_zet | % Testing for parallel matlab toolbox |
| isintriangle | determine if point (x0,y0) is in triangle defined by nodes (xt(3),yt(3)) |
| julian2greg | This function converts the Julian dates to Gregorian dates. |
| lanczosfilter | LANCZOSFILTER Filters a time series via Lanczos method (cosine filter). |
| lat_to_m | dy = lat_to_m(dlat,alat) |
| lon_to_m | dx = lon_to_m(dlon, alat) |
| m_ll2ll | M_ll2LL Converts LON,LAT to long,lat coordinates using the current projection |
| m_to_lat | |
| m_to_lon | |
| make_logo | Make the toolbox logo. Adapted from: |
| merge_bathymetry | Blend two sources of bathymetry |
| mjul2matlab | MJUL2MATLAB Convert a Modified Julian date to a Matlab Serial Date |
| mjul2str | Convert a modified Julian day to a Matlab datestr style string |
| mjul2str2 | Convert a modified Julian day to a Matlab datestr style string |
| mjulian2greg | Convert Modified Julian dates to Gregorian dates. |
| naut_2_cart | convert wind from nautical (speed,direction) to Cartesian (u,v) |
| pl64 | low pass filter (33 hr) |
| plot_fvcom_field | Plot an FVCOM field. This is somewhat similar to plot_field.m but is for |
| pp2nc | Child function to call the convsh program to convert the obscure pp |
| pp2nc_subset | Child function to call the convsh program to convert the PP format to a |
| pressure2depth | Depth Computes depth given the pressure at some latitude |
| qair2rh | Convert specific humitidy to relative humidity. |
| quiverwcolorbar | Melissa Day 5/24/2013 |
| read_FVCOM_river_file | function [Riv]=read_river_file(river_root,Mobj) |
| read_fvcom_mesh | Read fvcom mesh file into Matlab mesh object |
| read_kml | READ_KML reads a Google Earth kml file into Matlab |
| read_netCDF_FVCOM | Function to extract data from a Netcdf file output from FVCOM. |
| read_netcdf_vars | |
| read_netcdf_vars_xy | |
| read_polcoms_params | function to read polcoms parameters |
| read_scoord_params | function to read hc, cc, theta and bb from scoord_params.dat file |
| readdir | Read working directory with no arguments. Output depends on the function call |
| readzetUBVB | program to read POLCOMS output bin files dailymean |
| restrict_spatial_indices | Eliminates the FVCOM nodes and elements in the lists mask_nodes and |
| runmean | RUNMEAN - Very fast running mean (aka moving average) filter |
| show_sigma | plot a sigma distribution along a user-selected line |
| sigma_gen | Generate a generalised sigma coordinate distribution. |
| sigma_geo | Generate a geometric sigma coordinate distribution. |
| sigma_tanh | Generate a tanh sigma coordinate distribution. |
| surrounders | Return the IDs of the nodes surrounding node number `n'. |
| transect_nodes_screen | function to select and output index of nodes along a defined transect |
| tri_from_bndry | tesselate a triangular mesh using "triangle" from a single, unclosed boundary |
| turbine_area_sigma | Calculate the fraction of the rotor swept area is occupying each sigma layer |
| utm2deg | ------------------------------------------------------------------------- |
| wave_fric | wave friction using Soulsby page 80 |
| wgs2utm | ------------------------------------------------------------------------- |
| write_SMS_2dm | Output an SMS 2dm ASCII file from the triangulation given by tri, x and |
| write_SMS_cst | Export a set of points to a CST file which can be imported into SMS. |
| zero_to_nan | |
Master index