
TreeMix v. 1.12
$Revision: 231 $

npop:27 nsnp:399801
Estimating covariance matrix in 399801 blocks of size 1
SEED: 1501162417
Starting from:
(LT-3:0.000899366,(Unknown-7:0.000358623,Unknown-4:0.000418149):0.000899366);
Adding SE-8 [4/27]
ln(likelihood): -2910.6022 
(LT-3:0.00070037,(Unknown-4:0.000645597,(Unknown-7:0.000597247,SE-8:0.000234096):0):0.00070037);
Adding Unknown-5 [5/27]
ln(likelihood): -4531.2306 
(LT-3:0.000686866,((Unknown-7:0.000649151,SE-8:0.000293771):0,(Unknown-4:0.000449115,Unknown-5:7.86331e-05):0.00026873):0.000686866);
Adding FI-9 [6/27]
ln(likelihood): -4092.516 
(((SE-8:0.000367457,LT-3:0.000819199):0,(Unknown-7:0.000619188,(Unknown-4:0.000423256,Unknown-5:4.70907e-05):0.000277856):0.000144568):0.000648566,FI-9:0.000648566);
Adding SE-4 [7/27]
ln(likelihood): -4322.5671 
(((SE-8:0.000337564,(Unknown-7:0.00059729,(Unknown-5:3.52066e-05,(Unknown-4:2.09863e-05,SE-4:7.14192e-05):0.000421056):0.000291169):0.00015667):3.8345e-05,LT-3:0.00082401):0.000696838,FI-9:0.000696838);
Adding HYB [8/27]
ln(likelihood): -9979.2108 
(((SE-8:0.000310389,(Unknown-7:0.000570835,(Unknown-5:7.74236e-06,(Unknown-4:0,SE-4:4.73637e-05):0.000424366):0.000301384):0.000182141):5.87221e-05,LT-3:0.000801367):0.000696031,(FI-9:0.000779882,HYB:0.00235552):0.000696031);
Adding Obovata-2 [9/27]
ln(likelihood): -17756.229 
(((SE-8:0.000294301,(Unknown-7:0.000556626,(Unknown-5:0,(Unknown-4:0,SE-4:3.93041e-05):0.000427084):0.000313395):0.000222947):0.000615699,(FI-9:0,(HYB:0,Obovata-2:0.00407442):0.0021031):0.00194958):0,LT-3:0);
Adding BY-3 [10/27]
ln(likelihood): -34198.943 
(((FI-9:0,(HYB:0,Obovata-2:0.00408776):0.00210368):0.0019056,((SE-8:0.000294417,(Unknown-7:0.000554175,(Unknown-5:0,(Unknown-4:0,SE-4:3.78568e-05):0.000429994):0.000317446):0.000216651):0.000413784,BY-3:7.14207e-05):0.000227383):0,LT-3:0);
Adding DK-4 [11/27]
ln(likelihood): -36781.869 
(((FI-9:0,(HYB:0,Obovata-2:0.00409404):0.00211922):0.00188468,((SE-8:0.000264416,(Unknown-7:0.000546793,(Unknown-5:1.28492e-05,((Unknown-4:0,SE-4:4.32137e-05):0.000157712,DK-4:8.36023e-05):0.00031049):0.000311058):0.00021174):0.00045389,BY-3:3.42758e-05):0.000278743):0,LT-3:0);
Adding DE-4 [12/27]
ln(likelihood): -39882.687 
(((FI-9:0,(HYB:0,Obovata-2:0.00410199):0.00213552):0.00184721,((SE-8:0.00022584,(Unknown-7:0.000529063,(Unknown-5:7.15752e-06,(DK-4:0.00010509,((Unknown-4:0,SE-4:5.02526e-05):4.60587e-05,DE-4:0.000151978):0.000136827):0.000302617):0.000325558):0.000209495):0.000502664,BY-3:0):0.000344859):0,LT-3:0);
Adding CZE-5 [13/27]
ln(likelihood): -43358.304 
(((FI-9:0,(HYB:0,Obovata-2:0.00411175):0.00215203):0.00179853,((SE-8:0.000226582,(Unknown-7:0.000529982,((DK-4:0.000116211,((Unknown-4:8.52794e-06,SE-4:6.02131e-05):4.62957e-05,DE-4:0.000163072):0.000133705):0.000326452,(Unknown-5:3.39111e-05,CZE-5:0.000409753):0):0.000318529):0.000238168):0.000499819,BY-3:0):0.000412167):0,LT-3:0);
Adding RUS-3 [14/27]
ln(likelihood): -43695.729 
((((SE-8:0.000216934,(Unknown-7:0.000518272,((DK-4:0.000104791,((Unknown-4:0,SE-4:5.0285e-05):4.51367e-05,DE-4:0.000151701):0.000134951):0.000329178,(Unknown-5:2.28306e-05,CZE-5:0.000398554):0):0.000324057):0.000234303):0.000326083,LT-3:0.000774044):0.000125954,BY-3:0):0.000567126,((FI-9:0,(HYB:0,Obovata-2:0.00413222):0.0021436):0.0011577,RUS-3:0.000287703):0.000567126);
Adding Unknown-6 [15/27]
ln(likelihood): -44473.022 
((FI-9:0.000436181,(HYB:0,Obovata-2:0.00418159):0.00281541):0.000676485,(RUS-3:0.000611784,((LT-3:0.000747435,((SE-8:0.000195139,(Unknown-7:0.000492865,((DK-4:7.87013e-05,((Unknown-4:0,SE-4:3.57616e-05):3.19353e-05,DE-4:0.000125708):0.000134212):0.000330643,(Unknown-5:0,CZE-5:0.000372108):0):0.000320022):0.000218989):0.000178161,Unknown-6:7.06449e-05):0.000197343):0.000231465,BY-3:0):0.000115542):0.000676485);
Adding SK-5 [16/27]
ln(likelihood): -45656.797 
((FI-9:0.00030382,(HYB:0,Obovata-2:0.00419445):0.00269089):0.000708054,(RUS-3:0.000557115,((LT-3:0.000716866,((SE-8:0.000195521,(Unknown-7:0.000497001,(((CZE-5:0.000385753,(DK-4:9.42635e-05,((Unknown-4:0,SE-4:4.43417e-05):3.84236e-05,DE-4:0.00014133):0.00013141):0.000330194):0,Unknown-5:1.19298e-05):3.60273e-05,SK-5:0):0.00029834):0.000240854):0.000161997,Unknown-6:4.96921e-05):0.000214529):0.000245858,BY-3:0):0.000214911):0.000708054);
Adding LAV-3 [17/27]
ln(likelihood): -47622.764 
((FI-9:0.000255236,(HYB:0,Obovata-2:0.0042065):0.00260986):0.000697428,(RUS-3:0.000555333,(((LT-3:0.000721303,((SE-8:0.000200304,(Unknown-7:0.000497878,(((CZE-5:0.000387115,(DK-4:9.54256e-05,((Unknown-4:0,SE-4:4.50157e-05):3.9401e-05,DE-4:0.000142354):0.00013168):0.000333542):0,Unknown-5:1.28278e-05):3.72866e-05,SK-5:0):0.000302548):0.000230717):0.000168312,Unknown-6:5.16442e-05):0.000208601):0.000244047,BY-3:0):0.000266956,LAV-3:0.00169742):2.94583e-05):0.000697428);
Adding SE-9 [18/27]
ln(likelihood): -65911.939 
((FI-9:0.000288891,(HYB:0,Obovata-2:0.00421809):0.00260352):0.000590578,((((LT-3:0.000721139,((SE-8:0.000196552,(Unknown-7:0.00049602,(((CZE-5:0.000385097,Unknown-5:1.1123e-05):0,(DK-4:9.31028e-05,((Unknown-4:0,SE-4:4.37863e-05):3.89613e-05,DE-4:0.000139931):0.000133037):0.000334313):3.77474e-05,SK-5:0):0.000303829):0.000237771):0.000162205,Unknown-6:5.10036e-05):0.000207529):0.000242226,BY-3:0):0.000261729,LAV-3:0.00170019):0.000212987,(RUS-3:0.000530359,SE-9:0.000172066):0):0.000590578);
Adding RO-7 [19/27]
ln(likelihood): -71027.474 
((FI-9:0.000803431,((RUS-3:0.000426244,((BY-3:0,LAV-3:0.0016482):0,((Unknown-6:3.50171e-05,LT-3:0.000677975):0,((RO-7:0.000134025,SE-8:0.000174177):0,(Unknown-7:0.000469306,(((CZE-5:0.000359839,Unknown-5:0):0,(DK-4:6.79271e-05,((Unknown-4:0,SE-4:2.9864e-05):2.59701e-05,DE-4:0.000114941):0.00013232):0.000337736):3.92243e-05,SK-5:0):0.000307182):0.000187654):0.000325296):0.000481029):0.000403159):0.000204128,SE-9:8.41167e-06):1.67102e-06):0.00119575,(HYB:0.000676561,Obovata-2:0.00544286):0.00119575);
Adding Unknown-1 [20/27]
ln(likelihood): -70211.231 
((FI-9:0.000224127,(HYB:0.00029937,(Obovata-2:0.0038399,Unknown-1:0.0293567):0.00123999):0.00176005):0.000603581,(((BY-3:0,((Unknown-6:3.25233e-05,((RO-7:0.000114591,(Unknown-7:0.000482621,(((CZE-5:0.000373369,Unknown-5:0):0,(DK-4:8.11526e-05,((Unknown-4:0,SE-4:3.69075e-05):3.42239e-05,DE-4:0.000127683):0.000133912):0.000334862):3.91415e-05,SK-5:0):0.000310401):9.9145e-05):0.000191742,SE-8:0.000198657):0.000126384):0.00021462,LT-3:0.000687557):0.000245801):0.000494661,SE-9:0.000107599):0,(LAV-3:0.00160623,RUS-3:0.000464483):0):0.000603581);
Adding Unknown-9 [21/27]
ln(likelihood): -86463.368 
((FI-9:0.000220745,(HYB:0.000309173,(Obovata-2:0.00382445,Unknown-1:0.0293937):0.00125241):0.00172642):0.000528303,((LAV-3:0.00161812,((Unknown-9:6.01941e-05,SE-9:0.000107661):0,(BY-3:0,((Unknown-6:3.53985e-05,((RO-7:0.000115716,(Unknown-7:0.000483721,(((CZE-5:0.000374224,(DK-4:8.17885e-05,((Unknown-4:0,SE-4:3.72678e-05):3.54093e-05,DE-4:0.000128117):0.00013505):0.000335932):0,Unknown-5:8.9916e-07):3.94773e-05,SK-5:0):0.000311972):0.000100021):0.000196042,SE-8:0.00019859):0.000120435):0.000212359,LT-3:0.000691303):0.000241808):0.000506098):0):0.0001448,RUS-3:0.000423738):0.000528303);
Adding Unknown-8 [22/27]
ln(likelihood): -90736.88 
((FI-9:0.000493647,((Unknown-9:0,(((BY-3:0,((Unknown-6:3.62199e-05,((SE-8:0.000200192,Unknown-8:0.000290609):0,(RO-7:0.000110777,(Unknown-7:0.000478898,(((CZE-5:0.000369673,(DK-4:7.71063e-05,((Unknown-4:0,SE-4:3.46637e-05):3.21647e-05,DE-4:0.000123499):0.00013274):0.00032686):0,Unknown-5:0):3.61069e-05,SK-5:0):0.000301032):9.36953e-05):0.000227376):0.0001385):0.000202954,LT-3:0.000676392):0.000240653):0.000406563,RUS-3:0.000428686):0,LAV-3:0.00157187):0.000277984):0.000123636,SE-9:0):0.000417631):0.00095338,(HYB:0.000654419,(Obovata-2:0.00391216,Unknown-1:0.0295024):0.0015401):0.00095338);
Adding PL-5 [23/27]
ln(likelihood): -89455.018 
((FI-9:0.000272136,((Unknown-9:0,((RUS-3:0.000384847,(BY-3:0,((Unknown-6:3.67304e-05,((SE-8:0.000211751,Unknown-8:0.000302409):0,(RO-7:0.000131215,(Unknown-7:0.000505605,((((DK-4:0.000118772,((Unknown-4:1.05918e-05,SE-4:6.24068e-05):4.62444e-05,DE-4:0.000165205):0.000129832):0.000313391,(CZE-5:0.000401436,PL-5:1.79771e-05):0):1.34838e-05,Unknown-5:3.61929e-05):3.49639e-05,SK-5:0):0.000309698):9.15011e-05):0.000235666):0.000132155):0.00021243,LT-3:0.000667518):0.000247744):0.000432211):0,LAV-3:0.00152359):0.000297648):0.000140873,SE-9:0):0.000636703):0.000959579,(HYB:0.000383598,(Obovata-2:0.00386571,Unknown-1:0.0294521):0.00131463):0.000959579);
Adding PL-6 [24/27]
ln(likelihood): -97490.667 
((Obovata-2:0.00382928,Unknown-1:0.0294366):0.000854908,(HYB:0.000592822,(FI-9:0.000134386,((((BY-3:0,(LT-3:0.000678379,((Unknown-6:5.02664e-05,((SE-8:0.000228913,Unknown-8:0.000318889):0,(RO-7:0.000142333,(Unknown-7:0.000516277,((((CZE-5:0.000410585,(DK-4:0.00012818,((SE-4:7.18968e-05,Unknown-4:2.00598e-05):4.59764e-05,DE-4:0.000174704):0.000129826):0.000314891):0,PL-5:2.74338e-05):1.3337e-05,Unknown-5:4.58313e-05):3.43985e-05,SK-5:0):0.000307438):8.9293e-05):0.000216941):0.000133597):0.000147966,PL-6:0):9.76453e-05):0.00024011):0.000500003,RUS-3:0.000339021):0.000123751,Unknown-9:0):3.76248e-05,(LAV-3:0.00141518,SE-9:0):0):0.00093044):0.0015323):0.000854908);
Adding Unknown-3 [25/27]
ln(likelihood): -105254.65 
((Unknown-1:0.0291672,(HYB:0.000363835,(FI-9:3.66125e-05,(((((BY-3:0,((LT-3:0.000706861,((Unknown-6:7.35513e-05,((SE-8:0.000254078,Unknown-8:0.000343482):0,(RO-7:0.000162671,(Unknown-7:0.00053648,((((CZE-5:0.000429729,(DK-4:0.000147579,((DE-4:0.000181322,Unknown-4:6.88367e-05):0,SE-4:0.000120625):0.00014501):0.000315632):0,PL-5:4.69242e-05):1.3703e-05,Unknown-5:6.52034e-05):3.38627e-05,SK-5:1.91326e-05):0.0003055):8.82341e-05):0.00020238):0.00013279):0.000140556,PL-6:0):9.0876e-05):0.000130283,Unknown-3:0):0.000147661):0.000436909,RUS-3:0.000347042):0,LAV-3:0.00148454):0.000305647,Unknown-9:0):0.000153828,SE-9:0):0.000748167):0.00160797):0.00183122):0.00168048,Obovata-2:0.00168048);
Adding Omorika-1 [26/27]
ln(likelihood): -80572.631 
((BY-3:0,((LT-3:0.000694139,Unknown-3:0):0,((Unknown-6:6.52627e-05,((SE-8:0.000241523,Unknown-8:0.000331721):0,(RO-7:0.000152566,(Unknown-7:0.000527119,(((CZE-5:0.000431722,((DK-4:0.00013824,((Unknown-4:3.01962e-05,SE-4:8.11819e-05):4.77078e-05,DE-4:0.000184282):0.000130835):0.000283685,PL-5:1.58853e-05):4.94591e-05):0,Unknown-5:5.88863e-05):2.89464e-05,SK-5:1.00234e-05):0.000306304):9.0644e-05):0.00020973):0.000126903):0.00014298,PL-6:0):0.000152321):0.000204374):0.000219094,((RUS-3:0.000331069,LAV-3:0.00147569):0,(Unknown-9:0,(SE-9:0,(FI-9:5.94364e-05,(((Unknown-1:0.0158893,Omorika-1:0.0359273):0.0139659,Obovata-2:0.0036394):0.00171285,HYB:0.000475957):0.00143136):0.000685186):0.000133896):0.000284968):0.000219094);
Adding SE-3 [27/27]
ln(likelihood): -93201.853 
(BY-3:0,(((SE-3:0,(((Unknown-6:7.66216e-05,((SE-8:0.000255245,Unknown-8:0.00034562):0,(RO-7:0.00016139,(Unknown-7:0.000535995,((((PL-5:4.62828e-05,CZE-5:0.000428511):0,(DK-4:0.000146131,((DE-4:0.000178831,SE-4:0.000119631):0,Unknown-4:6.85394e-05):0.00014663):0.000315363):1.41436e-05,Unknown-5:6.42845e-05):3.41952e-05,SK-5:1.82216e-05):0.000304454):9.03857e-05):0.000194444):0.000128058):0.0001364,PL-6:0):0.000161473,Unknown-3:0):2.43558e-05):0,LT-3:0.000708264):0.000193096,((RUS-3:0.000326798,LAV-3:0.00147062):0,(Unknown-9:0,(SE-9:0,(FI-9:5.72218e-05,(((Unknown-1:0.0158838,Omorika-1:0.0359221):0.013972,Obovata-2:0.00363357):0.00171431,HYB:0.000472064):0.00142632):0.000679212):0.00013107):0.000278678):0.000426632):0);
Set root above Omorika-1
Targeting migration to vicinity of:
HYB Obovata-2
Obovata-2 RUS-3
FI-9 Obovata-2
Obovata-2 SE-9

FI-9 Obovata-2
HYB Obovata-2
SE-9 Obovata-2
FI-9 Obovata-2
HYB Obovata-2
Obovata-2 HYB
Obovata-2 RUS-3
Obovata-2 FI-9
Obovata-2 SE-9
Obovata-2 Unknown-9
Trying FI-9 Obovata-2
FI-9:5.72218e-05 Obovata-2:0.00363357
1->2 3.0968394e-07 -93201.853 -93201.853
2->1 0.1783606 -92668.916 -93201.853
p1->2 0.39786881 -93201.853 -92668.916
p2->1 0.081916168 -93170.405 -92668.916
Trying HYB Obovata-2
HYB:0.000462406 Obovata-2:0.00363979
1->2 0.85028756 -92165.782 -92668.916
2->1 0.32448745 -91984.677 -92165.782
p2->1 4.0751289e-05 -93201.854 -91984.677
Trying Obovata-2 FI-9
Obovata-2:0.00363357 FI-9:5.72218e-05
Trying Obovata-2 HYB
Obovata-2:0.00363357 HYB:0.000472172
Trying Obovata-2 RUS-3
Obovata-2:0.00363357 RUS-3:0.000326798
1->2 0.15915281 -86829.376 -91984.677
2->1 3.0968394e-07 -93201.855 -86829.376
p1->2 0.18752038 -87050.572 -86829.376
p2->1 3.0968394e-07 -93201.857 -86829.376
Obovata-2:0.00363357 (LAV-3:0.00147062,RUS-3:0.000326798):0
1->2 0.17886171 -85124.679 -86829.376
p1->2 0.19336008 -85129.25 -85124.679
p2->1 3.0968394e-07 -93201.856 -85124.679
Trying Obovata-2 SE-9
Obovata-2:0.00363357 SE-9:0
1->2 0.087457001 -90166.829 -85124.679
2->1 3.0968394e-07 -93201.855 -85124.679
p1->2 0.10772139 -90838.019 -85124.679
p2->1 3.0968394e-07 -93201.853 -85124.679
Trying Obovata-2 Unknown-9
Obovata-2:0.00363357 Unknown-9:0
1->2 0.11522258 -88459.016 -85124.679
2->1 3.0968394e-07 -93201.856 -85124.679
p1->2 0.14805986 -89049.412 -85124.679
p2->1 3.0968394e-07 -93201.855 -85124.679
Trying SE-9 Obovata-2
SE-9:0 Obovata-2:0.00363357
Migration added
Local updates around node 1: 0 ln(lk):-85124.679 
Local updates around node 2: 0 ln(lk):-85124.679 
Updates in migration position: 1 ln(lk):-84716.957 
Switches in migration direction: 0 ln(lk):-84716.957 
Local updates around node 1: 0 ln(lk):-84716.957 
Local updates around node 2: 0 ln(lk):-84716.957 
Switches in migration direction: 0 ln(lk):-84716.957 
Updates in migration position: 0 ln(lk):-84716.957 
Trying all local rearrangements
Local rearrangements: 1 ln(lk):-84713.283 
Local updates around node 1: 0 ln(lk):-84713.283 
Local updates around node 2: 0 ln(lk):-84713.283 
Switches in migration direction: 0 ln(lk):-84713.283 
Updates in migration position: 0 ln(lk):-84713.283 
Trying all local rearrangements
Local rearrangements: 0 ln(lk):-84713.283 
ln(likelihood):-84713.286 
Targeting migration to vicinity of:
HYB Obovata-2
FI-9 Obovata-2
Obovata-2 SE-9
Obovata-2 Unknown-9

FI-9 Obovata-2
HYB Obovata-2
SE-9 Obovata-2
FI-9 Obovata-2
HYB Obovata-2
Obovata-2 HYB
Obovata-2 FI-9
Obovata-2 SE-9
Obovata-2 Unknown-9
Obovata-2 SE-9
Obovata-2 Unknown-9
Trying FI-9 Obovata-2
FI-9:2.54421e-05 Obovata-2:0.0036336
1->2 3.0968394e-07 -84713.286 -84713.286
2->1 0.12080629 -84294.628 -84713.286
p1->2 0.39786881 -84713.286 -84294.628
p2->1 0.08699514 -84667.447 -84294.628
Trying HYB Obovata-2
HYB:0.00049549 Obovata-2:0.00364092
1->2 0.28780988 -84561.082 -84294.628
2->1 0.077877566 -84491.097 -84294.628
p1->2 0.39786881 -84713.286 -84294.628
p2->1 0.0034849585 -84713.166 -84294.628
Trying Obovata-2 FI-9
Obovata-2:0.00363343 FI-9:2.5581e-05
Trying Obovata-2 HYB
Obovata-2:0.00363343 HYB:0.000513988
Trying Obovata-2 SE-9
Obovata-2:0.00363343 SE-9:0
1->2 0.08943814 -81373.053 -84294.628
2->1 3.0968394e-07 -84713.288 -81373.053
p1->2 0.10924691 -82075.179 -81373.053
p2->1 3.0968394e-07 -84713.287 -81373.053
Trying Obovata-2 Unknown-9
Obovata-2:0.00363361 Unknown-9:0
1->2 0.10330293 -79693.004 -81373.053
2->1 3.0968394e-07 -84713.289 -79693.004
p1->2 0.13159256 -80384.032 -79693.004
p2->1 3.0968394e-07 -84713.288 -79693.004
Trying SE-9 Obovata-2
SE-9:0 Obovata-2:0.00363361
Migration added
Local updates around node 1: 0 ln(lk):-79693.004 
Local updates around node 2: 1 ln(lk):-79693.002 
Updates in migration position: 0 ln(lk):-79693.002 
Switches in migration direction: 0 ln(lk):-79693.002 
Local updates around node 1: 0 ln(lk):-79693.002 
Local updates around node 2: 1 ln(lk):-79690.65 
Switches in migration direction: 0 ln(lk):-79690.65 
Updates in migration position: 0 ln(lk):-79690.65 
Local updates around node 1: 0 ln(lk):-79690.65 
Local updates around node 2: 0 ln(lk):-79690.65 
Switches in migration direction: 0 ln(lk):-79690.65 
Updates in migration position: 0 ln(lk):-79690.65 
Trying all local rearrangements
Local rearrangements: 0 ln(lk):-79690.649 
ln(likelihood):-79690.65 
