
TreeMix v. 1.12
$Revision: 231 $

npop:27 nsnp:399801
Estimating covariance matrix in 399801 blocks of size 1
SEED: 1501162288
Starting from:
(RO-7:0.000754913,(CZE-5:0.000522279,Unknown-5:0.000150117):0.000754913);
Adding SK-5 [4/27]
ln(likelihood): -20084.407 
(RO-7:0.00078187,(Unknown-5:0.000176787,(CZE-5:0.000489513,SK-5:5.37314e-05):6.56629e-05):0.00078187);
Adding PL-5 [5/27]
ln(likelihood): -30900.948 
(RO-7:0.000830451,(Unknown-5:0.000185867,(SK-5:6.30996e-05,(CZE-5:0.000485777,PL-5:0.00010442):1.38419e-05):7.50813e-05):0.000830451);
Adding Unknown-1 [6/27]
ln(likelihood): -36290.839 
(RO-7:0,((Unknown-5:9.36394e-05,(SK-5:1.29865e-05,(CZE-5:0.000435509,PL-5:5.45767e-05):1.45868e-05):1.95097e-05):0.000962839,Unknown-1:0.0328619):0);
Adding SE-4 [7/27]
ln(likelihood): -44620.896 
(RO-7:0,((((CZE-5:0.000441384,(PL-5:1.84516e-05,SE-4:0.000458728):4.51045e-05):5.31045e-06,Unknown-5:7.44336e-05):1.47379e-05,SK-5:1.98456e-05):0.00105961,Unknown-1:0.0328838):0);
Adding HYB [8/27]
ln(likelihood): -18722.777 
((Unknown-1:0.031859,HYB:0.00204227):0.00103229,((((CZE-5:0.000386912,(PL-5:0,SE-4:0.00042489):3.07301e-05):6.03909e-06,Unknown-5:2.14421e-05):2.04033e-05,SK-5:0):0.000252799,RO-7:0.000113746):0.00103229);
Adding FI-9 [9/27]
ln(likelihood): -15616.897 
((Unknown-1:0.0320457,(HYB:0.00164467,FI-9:8.28224e-05):0.00060179):0.000920923,((((CZE-5:0.000387738,(PL-5:0,SE-4:0.000429379):3.36246e-05):6.91303e-06,Unknown-5:2.34347e-05):2.14712e-05,SK-5:0):0.000330736,RO-7:0.000152478):0.000920923);
Adding SE-9 [10/27]
ln(likelihood): -16048.866 
(((((CZE-5:0.000398393,(PL-5:0,SE-4:0.000438095):4.05266e-05):7.51214e-06,Unknown-5:3.48929e-05):2.06286e-05,SK-5:0):0.000440623,RO-7:0.000221762):0.000748153,((Unknown-1:0.032024,(HYB:0.00164308,FI-9:9.12489e-05):0.000528963):0.00031033,SE-9:1.42418e-05):0.000748153);
Adding Omorika-1 [11/27]
ln(likelihood): -15260.861 
(((((CZE-5:0.000389535,(PL-5:0,SE-4:0.000434271):3.6781e-05):8.19378e-06,Unknown-5:2.62669e-05):2.27938e-05,SK-5:0):0.000295851,RO-7:0.000127408):0.000698115,(((HYB:0.00122002,(Unknown-1:0.0158095,Omorika-1:0.0358456):0.0164075):0.000824647,FI-9:0.000352814):0.000589373,SE-9:0):0.000698115);
Adding Unknown-6 [12/27]
ln(likelihood): -16922.148 
((((HYB:0.00122488,(Unknown-1:0.0158148,Omorika-1:0.0358502):0.0164091):0.000830759,FI-9:0.000357525):0.000641229,SE-9:1.85683e-05):0.00059825,(((((CZE-5:0.000386538,(PL-5:0,SE-4:0.000434535):3.60425e-05):8.34161e-06,Unknown-5:2.3705e-05):2.38269e-05,SK-5:0):0.000355164,RO-7:0.000161615):9.97261e-05,Unknown-6:4.77005e-05):0.00059825);
Adding SE-3 [13/27]
ln(likelihood): -19586.158 
(((((HYB:0.00121339,(Unknown-1:0.0158037,Omorika-1:0.0358395):0.0164165):0.000832174,FI-9:0.000348409):0.000522798,SE-9:0):0.000756461,(((((CZE-5:0.000396745,(PL-5:0,SE-4:0.000442849):4.22979e-05):8.96364e-06,Unknown-5:3.45546e-05):2.28167e-05,SK-5:0):0.000358398,RO-7:0.000172718):0.000196481,Unknown-6:0.000107469):0.0004431):0,SE-3:0);
Adding RUS-3 [14/27]
ln(likelihood): -20314.409 
(((((((CZE-5:0.000396287,(PL-5:0,SE-4:0.000445941):4.41175e-05):9.95738e-06,Unknown-5:3.50258e-05):2.36897e-05,SK-5:0):0.000364473,RO-7:0.000172828):0.000199531,Unknown-6:0.00010811):0.000403788,((((HYB:0.00121407,(Unknown-1:0.0158055,Omorika-1:0.0358414):0.016432):0.000822614,FI-9:0.000355575):0.000510019,SE-9:0):0.000166042,RUS-3:0.000394679):0.000650575):0,SE-3:0);
Adding DE-4 [15/27]
ln(likelihood): -19886.668 
(((((((CZE-5:0.000388315,(PL-5:0,(SE-4:6.60268e-05,DE-4:0.000122724):0.000397289):4.62302e-05):3.82715e-07,Unknown-5:1.81943e-05):3.31806e-05,SK-5:0):0.000386797,RO-7:0.000152058):0.000203146,Unknown-6:7.44519e-05):0.000180314,SE-3:0):0.000386411,((((HYB:0.00123028,(Unknown-1:0.015821,Omorika-1:0.0358562):0.0164175):0.000832384,FI-9:0.000365642):0.000518453,SE-9:0):0.00029337,RUS-3:0.000480402):0.000386411);
Adding Unknown-7 [16/27]
ln(likelihood): -17394.986 
((((RO-7:0.000143788,((((CZE-5:0.000395241,(PL-5:0,(SE-4:7.26638e-05,DE-4:0.000130167):0.000394765):4.82888e-05):5.84475e-09,Unknown-5:2.50927e-05):3.23773e-05,SK-5:0):0.000304555,Unknown-7:0.000522591):7.25288e-05):0.000239062,Unknown-6:7.20656e-05):0.000224636,SE-3:0):0.000385047,((((HYB:0.00122771,(Unknown-1:0.0158181,Omorika-1:0.0358528):0.0164105):0.000843836,FI-9:0.000359316):0.000524935,SE-9:0):0.000250125,RUS-3:0.000448045):0.000385047);
Adding SE-8 [17/27]
ln(likelihood): -20334.155 
(((Unknown-6:9.86354e-05,((RO-7:0.000154134,((((CZE-5:0.000406403,Unknown-5:3.53057e-05):0,(PL-5:0,(SE-4:8.48784e-05,DE-4:0.000144131):0.000383377):4.77635e-05):2.84728e-05,SK-5:0):0.000297033,Unknown-7:0.000533271):6.70964e-05):0.000233782,SE-8:0.000281483):6.24818e-05):0.000237789,SE-3:0):0.00036858,((((HYB:0.00122957,(Unknown-1:0.0158202,Omorika-1:0.0358546):0.0164114):0.000846284,FI-9:0.000361213):0.00052822,SE-9:0):0.000218587,RUS-3:0.000436557):0.00036858);
Adding Unknown-4 [18/27]
ln(likelihood): -21041.577 
(((Unknown-6:7.09047e-05,((RO-7:0.000147786,((((CZE-5:0.00040737,(PL-5:0,(DE-4:0.000158306,(SE-4:5.49582e-05,Unknown-4:4.34902e-06):4.6938e-05):0.00039179):5.25639e-05):0,Unknown-5:3.50266e-05):3.32305e-05,SK-5:0):0.000307746,Unknown-7:0.000522891):8.19612e-05):0.000211162,SE-8:0.000246141):9.27381e-05):0.000320364,SE-3:0):0.000372902,((((HYB:0.00122529,(Unknown-1:0.0158151,Omorika-1:0.035849):0.0163977):0.000857145,FI-9:0.00035093):0.000539356,SE-9:0):0.00014075,RUS-3:0.000379731):0.000372902);
Adding DK-4 [19/27]
ln(likelihood): -22076.908 
((((HYB:0.00125444,(Unknown-1:0.0158435,Omorika-1:0.0358771):0.0163856):0.000867135,FI-9:0.000374738):0.000587184,SE-9:0):0.000164009,(RUS-3:0.000482771,((Unknown-6:3.09138e-05,((RO-7:0.000128833,((((CZE-5:0.000409873,(PL-5:0,((DE-4:0.000164444,(SE-4:6.08576e-05,Unknown-4:1.04105e-05):4.4889e-05):0.000126655,DK-4:0.000117909):0.000284949):4.81088e-05):0,Unknown-5:3.62397e-05):3.09465e-05,SK-5:0):0.000307664,Unknown-7:0.000503557):9.20231e-05):0.000197563,SE-8:0.000205829):0.000111492):0.0003115,SE-3:0):0.000525304):0.000164009);
Adding Obovata-2 [20/27]
ln(likelihood): -37084.138 
(((Unknown-6:8.3238e-06,((RO-7:0.000113094,((((CZE-5:0.00039762,(PL-5:0,((DE-4:0.000150011,(SE-4:4.84597e-05,Unknown-4:0):4.53505e-05):0.000132218,DK-4:0.000103659):0.000287466):4.82059e-05):0,Unknown-5:2.45911e-05):3.28982e-05,SK-5:0):0.000317514,Unknown-7:0.000489238):0.00010055):0.000239821,SE-8:0.000175795):0.000106692):0.000249004,SE-3:0):0.00041138,(RUS-3:0.000246659,(((HYB:0.000456218,((Unknown-1:0.0158874,Omorika-1:0.0359221):0.0139082,Obovata-2:0.00364025):0.00171823):0.00147685,FI-9:2.91048e-05):0.000724332,SE-9:0):0.000322922):0.00041138);
Adding PL-6 [21/27]
ln(likelihood): -44173.588 
((SE-3:0,((Unknown-6:1.96755e-05,((RO-7:0.000121502,((((CZE-5:0.000403969,(PL-5:0,((DE-4:0.000156584,(SE-4:5.32684e-05,Unknown-4:2.60647e-06):4.70087e-05):0.000132203,DK-4:0.000110143):0.000287902):4.93537e-05):0,Unknown-5:3.14035e-05):3.24334e-05,SK-5:0):0.000314643,Unknown-7:0.000497094):9.79177e-05):0.000220471,SE-8:0.000191121):0.000110866):0.000174471,PL-6:0):0.000149557):0.000396347,(RUS-3:0.000231291,(((HYB:0.000458906,((Unknown-1:0.0158902,Omorika-1:0.0359255):0.0139071,Obovata-2:0.00364348):0.00171942):0.00147511,FI-9:3.22658e-05):0.000719703,SE-9:0):0.000286268):0.000396347);
Adding LAV-3 [22/27]
ln(likelihood): -44912.803 
((SE-3:0,((Unknown-6:2.34193e-05,((RO-7:0.000123092,((((CZE-5:0.000405869,Unknown-5:3.2841e-05):0,(PL-5:0,((DE-4:0.000157796,(SE-4:5.45683e-05,Unknown-4:3.80079e-06):4.74725e-05):0.000132456,DK-4:0.000111486):0.000290363):5.0575e-05):3.33282e-05,SK-5:0):0.000317683,Unknown-7:0.000498409):9.8668e-05):0.000206198,SE-8:0.000198652):0.000117411):0.000168017,PL-6:0):0.000150405):0.0003386,((((HYB:0.000461208,((Unknown-1:0.0158868,Omorika-1:0.0359229):0.0139259,Obovata-2:0.00363906):0.00171756):0.00146225,FI-9:3.76891e-05):0.000705929,SE-9:0):0.000408942,(RUS-3:0.000305196,LAV-3:0.00144867):0):0.0003386);
Adding Unknown-9 [23/27]
ln(likelihood): -54109.1 
((SE-3:0,((Unknown-6:2.35091e-05,((RO-7:0.000121075,((((CZE-5:0.000403567,(PL-5:0,((DE-4:0.000154909,(SE-4:5.17981e-05,Unknown-4:9.42539e-07):4.84182e-05):0.000133584,DK-4:0.000108796):0.000291295):5.07985e-05):0,Unknown-5:3.08736e-05):3.36783e-05,SK-5:0):0.000318156,Unknown-7:0.000496397):9.91134e-05):0.000209513,SE-8:0.000195512):0.000110774):0.000166867,PL-6:0):0.000136127):0.000310813,((RUS-3:0.000346907,LAV-3:0.00149219):0,((((HYB:0.000478238,((Unknown-1:0.0158945,Omorika-1:0.0359313):0.0139562,Obovata-2:0.00364473):0.00171015):0.00144541,FI-9:5.80145e-05):0.000696462,SE-9:0):0.000139923,Unknown-9:0):0.000339944):0.000310813);
Adding BY-3 [24/27]
ln(likelihood): -67658.299 
(((SE-3:0,((Unknown-6:3.61964e-05,((RO-7:0.00016222,SE-8:0.000197221):0,(((((PL-5:1.89774e-05,CZE-5:0.000400976):0,((DE-4:0.000164092,(SE-4:6.10599e-05,Unknown-4:1.00609e-05):4.85107e-05):0.00013402,DK-4:0.000117961):0.000322543):1.66589e-05,Unknown-5:3.81449e-05):3.82545e-05,SK-5:0):0.000319215,Unknown-7:0.000506091):0.000196885):0.000209681):0.000160584,PL-6:0):0.00019532):0.0001047,((LAV-3:0.00146835,((((HYB:0.000472361,((Unknown-1:0.0158857,Omorika-1:0.035923):0.0139662,Obovata-2:0.00363545):0.00171055):0.00143828,FI-9:5.42015e-05):0.000688591,SE-9:0):0.000136198,Unknown-9:0):0.000298529):0,RUS-3:0.000323561):0.000506733):0,BY-3:0);
Adding LT-3 [25/27]
ln(likelihood): -70991.586 
((((SE-3:0,((Unknown-6:4.5142e-05,((RO-7:0.000136789,(((((PL-5:2.37832e-05,CZE-5:0.000405445):0,((DE-4:0.000168892,(SE-4:6.59585e-05,Unknown-4:1.47806e-05):4.86255e-05):0.000133137,DK-4:0.000122902):0.000323376):1.63654e-05,Unknown-5:4.2935e-05):3.74115e-05,SK-5:0):0.000316719,Unknown-7:0.000511814):9.75892e-05):0.00018152,SE-8:0.000221671):0.000114676):0.000152727,PL-6:0):0.000163271):0,LT-3:0.000694186):0.000186805,((LAV-3:0.00147019,((((HYB:0.000474106,((Unknown-1:0.0158875,Omorika-1:0.0359242):0.013968,Obovata-2:0.00363679):0.00171249):0.00143358,FI-9:5.73295e-05):0.000683718,SE-9:0):0.000134435,Unknown-9:0):0.00029502):0,RUS-3:0.000326001):0.000471454):0,BY-3:0);
Adding Unknown-3 [26/27]
ln(likelihood): -79656.717 
((((LAV-3:0.00147371,((((HYB:0.000477066,((Unknown-1:0.0158887,Omorika-1:0.0359263):0.0139733,Obovata-2:0.00363803):0.00171353):0.00142866,FI-9:6.17771e-05):0.000677516,SE-9:0):0.000132206,Unknown-9:0):0.000290709):0,RUS-3:0.000329505):0.000444617,(((SE-3:0,((Unknown-6:5.32744e-05,((RO-7:0.000172116,SE-8:0.000216803):0,(((((PL-5:2.85302e-05,CZE-5:0.000409848):0,((DE-4:0.00017354,(SE-4:7.05809e-05,Unknown-4:1.94507e-05):4.86065e-05):0.000132981,DK-4:0.000127562):0.00032404):1.66742e-05,Unknown-5:4.75602e-05):3.66484e-05,SK-5:1.80296e-06):0.000314847,Unknown-7:0.000517301):0.000181925):0.000198336):0.000146183,PL-6:0):0.000154101):0,LT-3:0.000707087):0.000100982,Unknown-3:0):0.000132035):0,BY-3:0);
Adding Unknown-8 [27/27]
ln(likelihood): -92815.706 
((BY-3:0,((LAV-3:0.00147063,((((HYB:0.000472073,((Unknown-1:0.0158838,Omorika-1:0.0359221):0.013972,Obovata-2:0.00363358):0.00171431):0.00142632,FI-9:5.72315e-05):0.000679211,SE-9:0):0.00013107,Unknown-9:0):0.000278679):0,RUS-3:0.000326808):0.000426632):6.87052e-05,(((SE-3:0,((Unknown-6:7.66313e-05,((((((((PL-5:4.62925e-05,CZE-5:0.000428521):0,((DE-4:0.000192186,(SE-4:8.91361e-05,Unknown-4:3.8044e-05):4.76641e-05):0.000130742,DK-4:0.000146141):0.000315363):1.41436e-05,Unknown-5:6.42941e-05):3.41952e-05,SK-5:1.82313e-05):0.000454833,SE-8:0.000234439):8.55065e-06,Unknown-8:0.000327892):0,Unknown-7:0.00060525):4.12802e-05,RO-7:0.000206362):0.000207073):0.0001364,PL-6:0):0.000146673):0,LT-3:0.000711789):9.55334e-05,Unknown-3:0):6.87052e-05);
Set root above Omorika-1
Targeting migration to vicinity of:
HYB Obovata-2
RUS-3 Obovata-2
FI-9 Obovata-2
SE-9 Obovata-2

HYB Obovata-2
FI-9 Obovata-2
SE-9 Obovata-2
HYB Obovata-2
FI-9 Obovata-2
Obovata-2 HYB
RUS-3 Obovata-2
FI-9 Obovata-2
SE-9 Obovata-2
Unknown-9 Obovata-2
Trying FI-9 Obovata-2
FI-9:5.72315e-05 Obovata-2:0.00363358
1->2 3.0968394e-07 -92815.707 -92815.706
2->1 0.17805146 -92286.953 -92815.706
p1->2 0.42117655 -92815.706 -92286.953
p2->1 0.081646942 -92784.35 -92286.953
Trying HYB Obovata-2
HYB:0.000462454 Obovata-2:0.00363976
1->2 0.85028756 -91779.295 -92286.953
2->1 0.32448745 -91598.943 -91779.295
p2->1 4.0751289e-05 -92815.707 -91598.943
Trying Obovata-2 HYB
Obovata-2:0.00363358 HYB:0.000472182
Trying RUS-3 Obovata-2
RUS-3:0.000326808 Obovata-2:0.00363358
1->2 3.0968394e-07 -92815.708 -91598.943
2->1 0.22692449 -85755.765 -91598.943
p1->2 3.0968394e-07 -92815.71 -85755.765
p2->1 0.23995672 -85773.151 -85755.765
Trying SE-9 Obovata-2
SE-9:0 Obovata-2:0.0037248
1->2 3.0968394e-07 -92815.708 -85755.765
2->1 0.087457001 -89785.968 -85755.765
p1->2 3.0968394e-07 -92815.707 -85755.765
p2->1 0.10751866 -90456.516 -85755.765
Trying Unknown-9 Obovata-2
Unknown-9:0 Obovata-2:0.00365204
1->2 3.0968394e-07 -92815.71 -85755.765
2->1 0.11522258 -88083.323 -85755.765
p1->2 3.0968394e-07 -92815.708 -85755.765
p2->1 0.1482245 -88672.223 -85755.765
Migration added
Local updates around node 1: 0 ln(lk):-85755.765 
Local updates around node 2: 1 ln(lk):-85755.762 
Updates in migration position: 1 ln(lk):-85483.606 
Switches in migration direction: 0 ln(lk):-85483.606 
Local updates around node 1: 0 ln(lk):-85483.606 
Local updates around node 2: 0 ln(lk):-85483.606 
Switches in migration direction: 0 ln(lk):-85483.606 
Updates in migration position: 0 ln(lk):-85483.606 
Trying all local rearrangements
Local rearrangements: 1 ln(lk):-85436.679 
Local updates around node 1: 0 ln(lk):-85436.679 
Local updates around node 2: 0 ln(lk):-85436.678 
Switches in migration direction: 0 ln(lk):-85436.678 
Updates in migration position: 0 ln(lk):-85436.678 
Trying all local rearrangements
Local rearrangements: 0 ln(lk):-85436.678 
ln(likelihood):-85436.679 
