adddrain (1) - add river basin to coordinate file
addheader (1) - add clm header to binary file
arr2clm (1) - convert 2-D float arrays into CLM file
asc2clm (1) - convert ARC/Info ASCII files to clm data files for LPJmL
backtrace (1) - print backtrace from core
bin2cdf (1) - convert binary output files into NetCDF files
cat2bsq (1) - concatenate output files from distributed LPJmL simulations
catclm (1) - concatenate LPJmL climate data files
cdf2bin(1) - convert NetCDF files into raw binary data
cdf2clm (1) - convert NetCDF files into CLM files
cdf2coord(1) - extract CLM grid file from NetCDF file
cdf2grid(1) - convert grid NetCDF file into grid CLM or raw file
cdf2soil (1) - convert NetCDF file into binary file
cft2clm (1) - convert binary landuse data files to CLM data files for LPJmL
clm2cdf (1) - convert CLM files into NetCDF files
cmpbin (1) - compare two binary output files
configure.sh (1) - configure LPJmL
country2cdf (1) - convert country/region code file into NetCDF file
cru2clm (1) - convert raw binary data files to CLM data files for LPJmL
cutclm (1) - cut LPJmL climate data files
cvrtclm (1) - convert version of CLM file to version 3 or 4
drainage2cdf (1) - convert CLM drainage file into NetCDF file
failonerror (3) - print error message and terminates program
fcloseoutput (3) - close LPJmL output files
flux_sum (3) - calculate global carbon and water fluxes
fopenoutput (3) - open LPJmL output files
fprintconfig (3) - print LPJmL configuration
fprintflux (3) - print global carbon and water fluxes
freeclimate (3) - close files and deallocate climate data
freeconfig (3) - deallocate memory for LPJmL configuration
freegrid (3) - deallocate memory of LPJmL grid
freeinput (3) - close files and deallocate input data
freelanduse (3) - close file and deallocate land use data
freepopdens (3) - close file and deallocate population density data
freewateruse (3) - close file and deallocate water use data
fwriterestart (3) - write restart file
getcellindex (1) - get cell index for coordinates in grid CLM file
getclimate (3) - get climate data for specified year
getco2 (3) - get atmospheric CO2 concentration
getcountry (1) - extract grid cells for specified countries
getlanduse (3) - get land use data
getpopdens (3) - get population density data
grid2clm (1) - convert grid data file to CLM data files for LPJmL
headersize (1) - print header size of CLM files
initclimate (3) - initialize climate data
initconfig (3) - initialize LPJmL configuration for the sequential version
initdrain (3) - initialize river routing network
initinput (3) - initialize input data
initlanduse (3) - initialize land use data
initmpiconfig (3) - initialize LPJmL configuration for the MPI version
initpopdens (3) - initialize population density data
initwateruse (3) - initialize water use data
isopen (3) - determine whether output file is open
isroot (3) - determine whether task is root task
iterate (3) - main time loop for LPJmL
iterateyear (3) - year time loop for LPJmL
lpjcat (1) - concatenate restart files from distributed LPJmL simulations.
lpjcheck (1) - check syntax of LPJmL configuration files
lpjfiles (1) - print list of input/output files of LPJmL
lpjml (1) - dynamic global vegetation model with managed land and river routing
lpjprint (1) - print contents of restart file of LPJmL model runs
lpjrun (1) - run parallel LPJmL program interactively.
lpjsubmit (1) - submit parallel LoadLeveler job for LPJmL simulation
printclm (1) - print contents of CLM files for LPJmL
printheader (1) - print header of CLM files for LPJmL
output_bsq (1) - concatenate all output files from distributed LPJmL simulations
lpj_paths.sh (1) - set environmental variables used by LPJmL
lpj_paths.csh (1) - set environmental variables used by LPJmL for C shell
clm (5) - input data files for LPJmL runs
manage2js (1) - convert management  *.par files to JSON file
mathclm (1) - perform mathematical operations with CLM files
mergeclm (1) - merge LPJmL climate data files
newgrid (3) - allocate LPJ grid cells
pnet_addconnect (3) - add connection to network
pnet_dup (3) - duplicate network
pnet_exchg (3) - exchange input and output data
pnet_free (3) - deallocate memory of Pnet struct
pnet_hi (3) - get upper bound for local sublattice
pnet_inindex (3) - get index for input buffer
pnet_init (3) - initialize Pnet datatypye
pnet_inlen (3) - get number of connections
pnet_input (3) - get pointer to input buffer
pnet_lo (3) - get lower bound for local sublattice
pnet_nodes (3) - get total number of nodes
pnet_outindex (3) - get index for output buffer
pnet_outlen (3) - get length of output buffer
pnet_output (3) - get pointer to output buffer
pnet_reverse (3) -  reverse direction of all connections
pnet_setup (3) - initialize communication pattern
pnet_strerror (3) - return string describing Pnet error
printflag (3) - print LPJmL compilation flags and compiler used
printglobal (1) - print global values for raw binary output files
printharvest (1) - print global harvested carbon for crops and managed grasslands
printlicense (3) - print LPJmL license
readconfig (3) - read LPJmL configuration
readpopdens (3) - read population density data
regridclm (1) - regrid CLM file to new grid
regridlpj (1) - regrid input data set for selected countries or specified grid file
regridsoil (1) - regrid soil file to new grid
setclm (1) - set value in header of CLM files for LPJmL
soil2cdf (1) - convert binary files into NetCDF files
statclm (1) - print statistics of CLM files
txt2grid (1) - convert text files to CLM grid data files for LPJmL
txt2clm (1) - convert CRU ASCII files to CLM data files for LPJmL
writecoords (3) - write coordinate file
writecountrycode (3) - write country code file
