Cross-species validation summary
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DE table: results/without_sample2/02_edger/edgeR_results_non_paired.csv
Selection: direction=up, FDR≤0.05, |logFC|≥1

miR family table: resources/miR_Family_Info.txt.zip
Human species_id=9606 Mouse species_id=10090

Targeting mode: seedscan_utr
Mouse genome: mm10
Site types: 8mer,7mer-m8 ; min_sites=1

Counts:
  Total selected miRNAs: 131
  Selected miRNAs mapped to family table (human): 131
  Selected miRNAs with Seed+m8 available: 131
  Selected miRNAs with ≥1 mouse miRNA sharing the same seed: 28
  Selected miRNAs with ≥1 mouse target gene (seedscan): 131
  Union of mouse target genes (SYMBOL) used for enrichment: 18320

Outputs:
  - Mapping TSV: results/without_sample2/08_cross_species_mouse_seedscan/tables/human_miRNA_familytable_mapping.tsv
  - Missing miRNAs TXT: results/without_sample2/08_cross_species_mouse_seedscan/tables/human_miRNAs_not_found_in_familytable.txt
  - CSV seed/targets: results/without_sample2/08_cross_species_mouse_seedscan/tables/seed_conservation_and_mouse_targets.csv
  - CSV target genes: results/without_sample2/08_cross_species_mouse_seedscan/tables/mouse_target_genes_used_for_enrichment.csv
  - CSV enrichment full: results/without_sample2/08_cross_species_mouse_seedscan/tables/mouse_enrichment_GO_BP_REAC_full.csv
  - CSV enrichment immune-only: results/without_sample2/08_cross_species_mouse_seedscan/tables/mouse_enrichment_GO_BP_REAC_immune_only.csv
  - PDF figure: results/without_sample2/08_cross_species_mouse_seedscan/figures/cross_species_seed_conservation_and_mouse_enrichment.pdf
