public class QueryProcessor
extends java.lang.Object
Modifier | Constructor and Description |
---|---|
protected |
QueryProcessor(java.util.List<java.lang.String> cTab1Copy,
java.util.List<java.lang.String> cTab2Copy,
java.lang.String[] signArray,
int neighbor_bondnum_A,
int set_bondnum_A,
java.util.List<java.lang.Integer> i_bond_neighborsA,
java.util.List<java.lang.String> c_bond_neighborsA,
int mappingSize,
java.util.List<java.lang.Integer> i_bond_setA,
java.util.List<java.lang.String> c_bond_setA)
Query molecule
|
Modifier and Type | Method and Description |
---|---|
protected int |
getBondNumA() |
protected int |
getNeighborBondNumA() |
protected void |
process(org.openscience.cdk.interfaces.IAtomContainer query,
org.openscience.cdk.interfaces.IAtomContainer target,
java.util.List<java.lang.Integer> unmapped_atoms_molA,
java.util.List<java.lang.Integer> mapped_atoms,
int counter) |
protected void |
process(int setNumA,
int setNumB,
java.util.List<java.lang.Integer> i_bond_setA,
java.util.List<java.lang.Integer> i_bond_setB,
java.util.List<java.lang.Integer> unmapped_atoms_molA,
java.util.List<java.lang.Integer> new_Mapping,
int counter) |
protected void |
process(org.openscience.cdk.isomorphism.matchers.IQueryAtomContainer query,
org.openscience.cdk.interfaces.IAtomContainer target,
java.util.List<java.lang.Integer> unmapped_atoms_molA,
java.util.List<java.lang.Integer> mapped_atoms,
int counter) |
protected QueryProcessor(java.util.List<java.lang.String> cTab1Copy, java.util.List<java.lang.String> cTab2Copy, java.lang.String[] signArray, int neighbor_bondnum_A, int set_bondnum_A, java.util.List<java.lang.Integer> i_bond_neighborsA, java.util.List<java.lang.String> c_bond_neighborsA, int mappingSize, java.util.List<java.lang.Integer> i_bond_setA, java.util.List<java.lang.String> c_bond_setA)
cTab1Copy
- cTab2Copy
- signArray
- neighbor_bondnum_A
- set_bondnum_A
- i_bond_neighborsA
- c_bond_neighborsA
- mappingSize
- i_bond_setA
- c_bond_setA
- protected void process(org.openscience.cdk.interfaces.IAtomContainer query, org.openscience.cdk.interfaces.IAtomContainer target, java.util.List<java.lang.Integer> unmapped_atoms_molA, java.util.List<java.lang.Integer> mapped_atoms, int counter)
query
- target
- unmapped_atoms_molA
- mapped_atoms
- counter
- protected void process(org.openscience.cdk.isomorphism.matchers.IQueryAtomContainer query, org.openscience.cdk.interfaces.IAtomContainer target, java.util.List<java.lang.Integer> unmapped_atoms_molA, java.util.List<java.lang.Integer> mapped_atoms, int counter)
query
- target
- unmapped_atoms_molA
- mapped_atoms
- counter
- protected void process(int setNumA, int setNumB, java.util.List<java.lang.Integer> i_bond_setA, java.util.List<java.lang.Integer> i_bond_setB, java.util.List<java.lang.Integer> unmapped_atoms_molA, java.util.List<java.lang.Integer> new_Mapping, int counter)
setNumA
- setNumB
- i_bond_setA
- i_bond_setB
- unmapped_atoms_molA
- new_Mapping
- counter
- protected int getNeighborBondNumA()
protected int getBondNumA()