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offsetBondDistanceProportion
- Variable in class uk.ac.ebi.reactionblast.graphics.direct.
Params
ofValue(int)
- Static method in enum uk.ac.ebi.reactionblast.tools.rxnfile.
MDLV2000Writer.SPIN_MULTIPLICITY
Create a SPIN_MULTIPLICITY instance for the specified value.
opaqueHighlightColor
- Variable in class uk.ac.ebi.reactionblast.graphics.direct.
AbstractHighlightDrawer
or(MolFingerprint)
- Method in class uk.ac.ebi.reactionblast.fingerprints.
MolFingerprint
orderAtomArray(List<IAtom>)
- Method in class uk.ac.ebi.reactionblast.mechanism.
BEMatrix
This method performs the sorting of the atoms of the BEMatrix according to the ArrayList passed as parameter.
org.openscience.cdk.smiles
- package org.openscience.cdk.smiles
org.openscience.smsd
- package org.openscience.smsd
org.openscience.smsd.algorithm.matchers
- package org.openscience.smsd.algorithm.matchers
org.openscience.smsd.algorithm.mcgregor
- package org.openscience.smsd.algorithm.mcgregor
org.openscience.smsd.algorithm.mcsplus
- package org.openscience.smsd.algorithm.mcsplus
org.openscience.smsd.algorithm.rgraph
- package org.openscience.smsd.algorithm.rgraph
org.openscience.smsd.algorithm.single
- package org.openscience.smsd.algorithm.single
org.openscience.smsd.algorithm.vflib
- package org.openscience.smsd.algorithm.vflib
org.openscience.smsd.algorithm.vflib.builder
- package org.openscience.smsd.algorithm.vflib.builder
org.openscience.smsd.algorithm.vflib.interfaces
- package org.openscience.smsd.algorithm.vflib.interfaces
org.openscience.smsd.algorithm.vflib.map
- package org.openscience.smsd.algorithm.vflib.map
org.openscience.smsd.algorithm.vflib.query
- package org.openscience.smsd.algorithm.vflib.query
org.openscience.smsd.algorithm.vflib.seeds
- package org.openscience.smsd.algorithm.vflib.seeds
org.openscience.smsd.algorithm.vflib.substructure
- package org.openscience.smsd.algorithm.vflib.substructure
org.openscience.smsd.filters
- package org.openscience.smsd.filters
org.openscience.smsd.helper
- package org.openscience.smsd.helper
org.openscience.smsd.interfaces
- package org.openscience.smsd.interfaces
org.openscience.smsd.mcss
- package org.openscience.smsd.mcss
org.openscience.smsd.ring
- package org.openscience.smsd.ring
org.openscience.smsd.tools
- package org.openscience.smsd.tools
orthonormalize(EBIMatrix)
- Method in class uk.ac.ebi.reactionblast.tools.
EBIMatrix
Orthonormalize the vectors of this matrix by Gram-Schmidt.
OTHER_RXN
- Static variable in class uk.ac.ebi.reactionblast.tools.
TestUtility
OutlineHighlighter
- Class in
uk.ac.ebi.reactionblast.graphics.direct
OutlineHighlighter(Params)
- Constructor for class uk.ac.ebi.reactionblast.graphics.direct.
OutlineHighlighter
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