public class GameTheoryMatrix extends BaseGameTheory implements IGraphTheoryMatrix
Constructor and Description |
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GameTheoryMatrix(IMappingAlgorithm theory,
org.openscience.cdk.interfaces.IReaction reaction,
boolean removeHydrogen)
Creates a new instance of GameTheoryMatrix
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Modifier and Type | Method and Description |
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void |
Clear()
clears all the containers in this object
|
int |
getDelta() |
java.util.List<java.lang.String> |
getEductCounter() |
Holder |
getMatrixHolder() |
java.util.List<java.lang.String> |
getProductCounter() |
MoleculeMoleculeMapping |
getReactionMolMapping() |
void |
setReactionMolMapping(MoleculeMoleculeMapping reactionMolMapping) |
getSuffix, isPseudoAtoms, UpdateMatrix, UpdateMatrix
generateImage, printCliqueMatrix, printEnergyMatrix, printFlagMatrix, printFragmentMatrix, printGraphMatching, printMatrixAtomContainer, printSimMatrix, printSMILES, printStereoMatrix
printAtomAtomMapping, printAtoms, printMolecule, printReaction
public GameTheoryMatrix(IMappingAlgorithm theory, org.openscience.cdk.interfaces.IReaction reaction, boolean removeHydrogen) throws java.lang.Exception
theory
- reaction
- removeHydrogen
- java.lang.Exception
public void Clear() throws java.io.IOException
Clear
in interface IGraphTheoryMatrix
java.io.IOException
public java.util.List<java.lang.String> getEductCounter()
getEductCounter
in interface IGraphTheoryMatrix
public java.util.List<java.lang.String> getProductCounter()
getProductCounter
in interface IGraphTheoryMatrix
public Holder getMatrixHolder()
getMatrixHolder
in interface IGraphTheoryMatrix
public MoleculeMoleculeMapping getReactionMolMapping()
getReactionMolMapping
in interface IGameTheory
getReactionMolMapping
in interface IGraphTheoryMatrix
public int getDelta()
getDelta
in interface IGameTheory
getDelta
in interface IGraphTheoryMatrix
public void setReactionMolMapping(MoleculeMoleculeMapping reactionMolMapping)
setReactionMolMapping
in interface IGameTheory
setReactionMolMapping
in interface IGraphTheoryMatrix
reactionMolMapping
- the reactionMolMapping to set