Supplementary Table S3 https://doi.org/10.5281/zenodo.15790791

The following two tab-separated tables list:
	the arbitrary haplotype number;
	the GenBank or BOLD reference number;
	the number of base pairs read, included any read as partly ambiguous;
	the species (based on our own anatomical identifications or on the position in the phylogenetic tree: identifications
		in GenBank or BOLD may differ; names after a slash are obsolete, but help to clarify the specimen).

The table is repeated, first ordered according to the tree in Figs 3 and 4, then ordered by haplotype number.
Note that haplotype no. 3 is not used.

196	MT827967.1	655	Krynickillus melanocephalus
94	MT827964.1	655	Deroceras reticulatum
89	PV478724.1	655	Eumilax intermittens
90	PV478725.1	648	Eumilax brandti
115	PV478726.1	654	Svanetia caucasica
85	PV478727.1	397	Gigantomilax majoricensis
86	PV478728.1	655	Gigantomilax koenigi
88	PV478730.1	655	Turcomilax turkestanus
179	FJ606483.1	654	Limax
180	JX435826.1	647	Limax
185	ON123541.1	655	Limax
186	FJ606477.1	654	Limax
190	JX435858.1	572	Limax
191	JX435865.1	450	Limax
192	FJ606481.1	653	Limax
195	PV478729.1	593	Limax cinereoniger
193	JX435873.1	593	Limax
194	MT975672.1	655	Limax
188	JX435879.1	631	Limax
189	JX435841.1	653	Limax
181	GQ145508.1	606	Limax
182	GQ145505.1	613	Limax
183	HQ203064.1	655	Limax
184	GQ145502.1	613	Limax
176	GQ145519.1	613	Limax
177	GQ145573.1	615	Limax
187	JX435824.1	649	Limax
118	JN248294.2	655	Limax
178	GQ145572.1	615	Limax
174	GQ145553.1	613	Limax
175	PQ676334.1	655	Limax
172	GQ145539.1	612	Limax
173	GQ145575.1	615	Limax
97	MF034732.1	616	Limacus flavus
96	MT947692.1	655	Limacus flavus
106	OP663291.1	655	Limacus flavus
98	MF983173.1	655	Limacus flavus
99	OP663293.1	655	Limacus flavus
100	FJ606457.1	645	Limacus flavus
104	KF894366.1	620	Limacus flavus
168	MF983181.1	655	Limacus flavus
170	MF983058.1	655	Limacus flavus
209	MF983087.1	655	Limacus flavus
210	MF983062.1	654	Limacus flavus
211	MF983060.1	654	Limacus flavus
169	MF983109.1	655	Limacus flavus
171	MF983097.1	655	Limacus flavus
95	PV478731.1	637	Limacus maculatus
105	KF894318.1	620	Limacus maculatus
107	ON756107.1	655	Limacus maculatus
101	AM259712.1	527	Limacus maculatus
102	MT947694.1	655	Limacus maculatus
103	AM259714.1	554	Limacus maculatus
116	MT975665.1	655	Weltersia obscura
117	MT975667.1	655	Weltersia obscura
113	PV478732.1	594	Malacolimax mrazeki
114	PV478733.1	647	Malacolimax mrazeki
139	ON123498.1	655	Malacolimax mrazeki
110	MT975674.1	655	Malacolimax tenellus
218	FBGAS392-11	655	Malacolimax tenellus
108	ON123492.1	655	Malacolimax tenellus
109	MT975673.1	655	Malacolimax tenellus
111	KF894349.1	620	Malacolimax tenellus
112	JX435836.1	654	Malacolimax tenellus
134	ON123490.1	655	Malacolimax tenellus
135	ON123491.1	655	Malacolimax tenellus
137	ON123496.1	655	Malacolimax tenellus
138	ON123497.1	655	Malacolimax tenellus
140	ON123499.1	655	Malacolimax tenellus
141	ON123500.1	655	Malacolimax tenellus
146	ON123521.1	624	Malacolimax tenellus
148	ON123526.1	655	Malacolimax tenellus
149	ON123527.1	655	Malacolimax tenellus
206	ON123536.1	655	Malacolimax tenellus
136	ON123494.1	655	Malacolimax tenellus
142	ON123504.1	655	Malacolimax tenellus
2	PV478736.1	654	Lehmannia brunneri
16	PV478735.1	490	Lehmannia brunneri
15	PV478756.1	397	Lehmannia brunneri
17	PV478737.1	655	Lehmannia brunneri
10	PV478738.1	655	Lehmannia brunneri
6	PV478739.1	646	Lehmannia szigethyae/ohridiana
9	PV478758.1	518	Lehmannia szigethyae
4	PV478740.1	655	Lehmannia szigethyae
5	PV478757.1	600	Lehmannia szigethyae
11	PQ669219.1	647	Lehmannia macroflagellata
153	ON602091.1	655	Lehmannia macroflagellata
154	ON602092.1	655	Lehmannia macroflagellata
12	PV478741.1	655	Lehmannia horezia
49	MT975669.1	655	Lehmannia marginata
51	MT975668.1	655	Lehmannia marginata
46	PV478760.1	649	Lehmannia marginata
47	PV490881.1	655	Lehmannia marginata
53	MF982946.1	655	Lehmannia marginata
54	MF982959.1	655	Lehmannia marginata
55	MF982961.1	655	Lehmannia marginata
57	MF982963.1	655	Lehmannia marginata
58	MF982965.1	655	Lehmannia marginata
60	MF982987.1	655	Lehmannia marginata
63	MF983027.1	654	Lehmannia marginata
64	MF983028.1	655	Lehmannia marginata
76	KF894329.1	620	Lehmannia marginata
145	ON123508.1	655	Lehmannia marginata
151	ON123532.1	655	Lehmannia marginata
155	ON602093.1	655	Lehmannia marginata
158	PP592760.1	655	Lehmannia marginata
159	PP592761.1	655	Lehmannia marginata
215	MOSK042-22	655	Lehmannia marginata
157	PP592759.1	655	Lehmannia marginata
162	PP592764.1	655	Lehmannia marginata
124	ON123428.1	655	Lehmannia marginata
126	ON123434.1	655	Lehmannia marginata
56	MF982962.1	655	Lehmannia marginata
59	MF982973.1	644	Lehmannia marginata
44	PV478761.1	655	Lehmannia marginata
125	ON123429.1	655	Lehmannia marginata
130	ON123444.1	655	Lehmannia marginata
132	ON123471.1	655	Lehmannia marginata
133	ON123487.1	655	Lehmannia marginata
152	ON123535.1	655	Lehmannia marginata
156	ON602095.1	655	Lehmannia marginata
205	ON123525.1	636	Lehmannia marginata
212	FBGAS099-10	639	Lehmannia marginata
213	FBGAS066-10	655	Lehmannia marginata
160	PP592762.1	655	Lehmannia marginata
161	PP592763.1	655	Lehmannia marginata
45	PV478759.1	655	Lehmannia marginata
66	MF983031.1	655	Lehmannia marginata
67	MF983037.1	655	Lehmannia marginata
68	MF983041.1	655	Lehmannia marginata
69	MF983042.1	655	Lehmannia marginata
75	KF894292.1	620	Lehmannia marginata
74	KF894234.1	620	Lehmannia marginata
48	PV478743.1	655	Lehmannia marginata/islandica
65	MF983029.1	655	Lehmannia rupicola
52	MF982945.1	655	Lehmannia rupicola
61	MF983010.1	655	Lehmannia rupicola
62	MF983016.1	655	Lehmannia rupicola
127	ON123436.1	655	Lehmannia rupicola
214	LPRCM036-19	653	Lehmannia rupicola
120	ON123419.1	655	Lehmannia rupicola
122	ON123423.1	655	Lehmannia rupicola
123	ON123424.1	655	Lehmannia rupicola
144	ON123507.1	655	Lehmannia rupicola
121	ON123420.1	655	Lehmannia rupicola
129	ON123439.1	655	Lehmannia rupicola
150	ON123531.1	655	Lehmannia rupicola
147	ON123524.1	636	Lehmannia rupicola
131	ON123458.1	655	Lehmannia rupicola
128	ON123437.1	655	Lehmannia rupicola
1	PV478745.1	653	Lehmannia rupicola
0	PV478744.1	646	Lehmannia rupicola
8	PV478763.1	184	Lehmannia horezia
14	PV478746.1	655	Lehmannia carpatica
163	PP592765.1	655	Lehmannia carpatica
13	PV478762.1	655	Lehmannia carpatica
164	PP592766.1	655	Lehmannia carpatica
91	PV478747.1	655	Bielzia coerulans
92	JX435825.1	654	Bielzia coerulans
93	JX435829.1	654	Bielzia coerulans
166	PQ428074.1	655	Bielzia coerulans
167	PQ428077.1	655	Bielzia coerulans
87	PV478748.1	655	Ambigolimax/Malacolimax sp.
165	PV478749.1	655	Ambigolimax/Malacolimax wiktori
143	ON123505.1	655	Ambigolimax sp.
26	PV478765.1	655	Ambigolimax waterstoni
24	PV478750.1	655	Ambigolimax waterstoni
25	PV478764.1	655	Ambigolimax waterstoni
216	LPRCM001-19	652	Ambigolimax waterstoni
217	LPRCM002-19	652	Ambigolimax waterstoni
80	OQ198715.1	655	Ambigolimax valentianus
36	PV478766.1	655	Ambigolimax valentianus
37	PV478767.1	655	Ambigolimax valentianus
38	MF982944.1	655	Ambigolimax valentianus
39	PV478768.1	655	Ambigolimax valentianus
41	PV478770.1	655	Ambigolimax valentianus
42	PV478771.1	655	Ambigolimax valentianus
50	PV478773.1	636	Ambigolimax valentianus
77	LC433884.1	459	Ambigolimax valentianus
82	MG747681.1	655	Ambigolimax valentianus
84	MG799145.1	655	Ambigolimax valentianus
199	OP663298.1	655	Ambigolimax valentianus
202	MG747678.1	655	Ambigolimax valentianus
207	OQ642085.1	630	Ambigolimax valentianus
7	MF982907.1	655	Ambigolimax valentianus
119	PV478774.1	431	Ambigolimax valentianus
200	MF982908.1	655	Ambigolimax valentianus
204	PV478775.1	596	Ambigolimax valentianus
208	OQ642086.1	635	Ambigolimax valentianus
79	LC433889.1	459	Ambigolimax valentianus
81	LC433892.1	459	Ambigolimax valentianus
198	PV478776.1	655	Ambigolimax valentianus
203	KF894281.1	620	Ambigolimax valentianus
40	PV478769.1	655	Ambigolimax valentianus
43	PV478772.1	655	Ambigolimax valentianus
78	LC433887.1	459	Ambigolimax valentianus
19	PV478778.1	442	Ambigolimax melitensis
21	PV478780.1	631	Ambigolimax melitensis
22	PV478753.1	655	Ambigolimax melitensis
23	PV478781.1	655	Ambigolimax melitensis
18	PV478777.1	655	Ambigolimax melitensis
20	PV478779.1	655	Ambigolimax melitensis
32	PV478784.1	655	Ambigolimax parvipenis
35	OP663296.1	655	Ambigolimax parvipenis
27	PV478755.1	655	Ambigolimax parvipenis
28	PV478782.1	655	Ambigolimax parvipenis
197	PV478786.1	655	Ambigolimax parvipenis
31	PV478754.1	655	Ambigolimax parvipenis
83	MG747684.1	588	Ambigolimax parvipenis
70	MG747671.1	655	Ambigolimax parvipenis
71	MG747672.1	655	Ambigolimax parvipenis
73	MG747682.1	655	Ambigolimax parvipenis
34	PP592758.1	655	Ambigolimax parvipenis
29	ON123502.1	655	Ambigolimax parvipenis
30	PV478783.1	655	Ambigolimax parvipenis
201	MG856342.1	655	Ambigolimax parvipenis
33	PV478785.1	655	Ambigolimax parvipenis
72	MG747673.1	655	Ambigolimax parvipenis
219	PQ327558.1	655	Ambigolimax parvipenis

Reordered by haplotype number:
			
0	PV478744.1	646	Lehmannia rupicola
1	PV478745.1	653	Lehmannia rupicola
2	PV478736.1	654	Lehmannia brunneri
4	PV478740.1	655	Lehmannia szigethyae
5	PV478757.1	600	Lehmannia szigethyae
6	PV478739.1	646	Lehmannia szigethyae/ohridiana
7	MF982907.1	655	Ambigolimax valentianus
8	PV478763.1	184	Lehmannia horezia
9	PV478758.1	518	Lehmannia szigethyae
10	PV478738.1	655	Lehmannia brunneri
11	PQ669219.1	647	Lehmannia macroflagellata
12	PV478741.1	655	Lehmannia horezia
13	PV478762.1	655	Lehmannia carpatica
14	PV478746.1	655	Lehmannia carpatica
15	PV478756.1	397	Lehmannia brunneri
16	PV478735.1	490	Lehmannia brunneri
17	PV478737.1	655	Lehmannia brunneri
18	PV478777.1	655	Ambigolimax melitensis
19	PV478778.1	442	Ambigolimax melitensis
20	PV478779.1	655	Ambigolimax melitensis
21	PV478780.1	631	Ambigolimax melitensis
22	PV478753.1	655	Ambigolimax melitensis
23	PV478781.1	655	Ambigolimax melitensis
24	PV478750.1	655	Ambigolimax waterstoni
25	PV478764.1	655	Ambigolimax waterstoni
26	PV478765.1	655	Ambigolimax waterstoni
27	PV478755.1	655	Ambigolimax parvipenis
28	PV478782.1	655	Ambigolimax parvipenis
29	ON123502.1	655	Ambigolimax parvipenis
30	PV478783.1	655	Ambigolimax parvipenis
31	PV478754.1	655	Ambigolimax parvipenis
32	PV478784.1	655	Ambigolimax parvipenis
33	PV478785.1	655	Ambigolimax parvipenis
34	PP592758.1	655	Ambigolimax parvipenis
35	OP663296.1	655	Ambigolimax parvipenis
36	PV478766.1	655	Ambigolimax valentianus
37	PV478767.1	655	Ambigolimax valentianus
38	MF982944.1	655	Ambigolimax valentianus
39	PV478768.1	655	Ambigolimax valentianus
40	PV478769.1	655	Ambigolimax valentianus
41	PV478770.1	655	Ambigolimax valentianus
42	PV478771.1	655	Ambigolimax valentianus
43	PV478772.1	655	Ambigolimax valentianus
44	PV478761.1	655	Lehmannia marginata
45	PV478759.1	655	Lehmannia marginata
46	PV478760.1	649	Lehmannia marginata
47	PV490881.1	655	Lehmannia marginata
48	PV478743.1	655	Lehmannia marginata/islandica
49	MT975669.1	655	Lehmannia marginata
50	PV478773.1	636	Ambigolimax valentianus
51	MT975668.1	655	Lehmannia marginata
52	MF982945.1	655	Lehmannia rupicola
53	MF982946.1	655	Lehmannia marginata
54	MF982959.1	655	Lehmannia marginata
55	MF982961.1	655	Lehmannia marginata
56	MF982962.1	655	Lehmannia marginata
57	MF982963.1	655	Lehmannia marginata
58	MF982965.1	655	Lehmannia marginata
59	MF982973.1	644	Lehmannia marginata
60	MF982987.1	655	Lehmannia marginata
61	MF983010.1	655	Lehmannia rupicola
62	MF983016.1	655	Lehmannia rupicola
63	MF983027.1	654	Lehmannia marginata
64	MF983028.1	655	Lehmannia marginata
65	MF983029.1	655	Lehmannia rupicola
66	MF983031.1	655	Lehmannia marginata
67	MF983037.1	655	Lehmannia marginata
68	MF983041.1	655	Lehmannia marginata
69	MF983042.1	655	Lehmannia marginata
70	MG747671.1	655	Ambigolimax parvipenis
71	MG747672.1	655	Ambigolimax parvipenis
72	MG747673.1	655	Ambigolimax parvipenis
73	MG747682.1	655	Ambigolimax parvipenis
74	KF894234.1	620	Lehmannia marginata
75	KF894292.1	620	Lehmannia marginata
76	KF894329.1	620	Lehmannia marginata
77	LC433884.1	459	Ambigolimax valentianus
78	LC433887.1	459	Ambigolimax valentianus
79	LC433889.1	459	Ambigolimax valentianus
80	OQ198715.1	655	Ambigolimax valentianus
81	LC433892.1	459	Ambigolimax valentianus
82	MG747681.1	655	Ambigolimax valentianus
83	MG747684.1	588	Ambigolimax parvipenis
84	MG799145.1	655	Ambigolimax valentianus
85	PV478727.1	397	Gigantomilax majoricensis
86	PV478728.1	655	Gigantomilax koenigi
87	PV478748.1	655	Ambigolimax/Malacolimax sp.
88	PV478730.1	655	Turcomilax turkestanus
89	PV478724.1	655	Eumilax intermittens
90	PV478725.1	648	Eumilax brandti
91	PV478747.1	655	Bielzia coerulans
92	JX435825.1	654	Bielzia coerulans
93	JX435829.1	654	Bielzia coerulans
94	MT827964.1	655	Deroceras reticulatum
95	PV478731.1	637	Limacus maculatus
96	MT947692.1	655	Limacus flavus
97	MF034732.1	616	Limacus flavus
98	MF983173.1	655	Limacus flavus
99	OP663293.1	655	Limacus flavus
100	FJ606457.1	645	Limacus flavus
101	AM259712.1	527	Limacus maculatus
102	MT947694.1	655	Limacus maculatus
103	AM259714.1	554	Limacus maculatus
104	KF894366.1	620	Limacus flavus
105	KF894318.1	620	Limacus maculatus
106	OP663291.1	655	Limacus flavus
107	ON756107.1	655	Limacus maculatus
108	ON123492.1	655	Malacolimax tenellus
109	MT975673.1	655	Malacolimax tenellus
110	MT975674.1	655	Malacolimax tenellus
111	KF894349.1	620	Malacolimax tenellus
112	JX435836.1	654	Malacolimax tenellus
113	PV478732.1	594	Malacolimax mrazeki
114	PV478733.1	647	Malacolimax mrazeki
115	PV478726.1	654	Svanetia caucasica
116	MT975665.1	655	Weltersia obscura
117	MT975667.1	655	Weltersia obscura
118	JN248294.2	655	Limax
119	PV478774.1	431	Ambigolimax valentianus
120	ON123419.1	655	Lehmannia rupicola
121	ON123420.1	655	Lehmannia rupicola
122	ON123423.1	655	Lehmannia rupicola
123	ON123424.1	655	Lehmannia rupicola
124	ON123428.1	655	Lehmannia marginata
125	ON123429.1	655	Lehmannia marginata
126	ON123434.1	655	Lehmannia marginata
127	ON123436.1	655	Lehmannia rupicola
128	ON123437.1	655	Lehmannia rupicola
129	ON123439.1	655	Lehmannia rupicola
130	ON123444.1	655	Lehmannia marginata
131	ON123458.1	655	Lehmannia rupicola
132	ON123471.1	655	Lehmannia marginata
133	ON123487.1	655	Lehmannia marginata
134	ON123490.1	655	Malacolimax tenellus
135	ON123491.1	655	Malacolimax tenellus
136	ON123494.1	655	Malacolimax tenellus
137	ON123496.1	655	Malacolimax tenellus
138	ON123497.1	655	Malacolimax tenellus
139	ON123498.1	655	Malacolimax mrazeki
140	ON123499.1	655	Malacolimax tenellus
141	ON123500.1	655	Malacolimax tenellus
142	ON123504.1	655	Malacolimax tenellus
143	ON123505.1	655	Ambigolimax sp.
144	ON123507.1	655	Lehmannia rupicola
145	ON123508.1	655	Lehmannia marginata
146	ON123521.1	624	Malacolimax tenellus
147	ON123524.1	636	Lehmannia rupicola
148	ON123526.1	655	Malacolimax tenellus
149	ON123527.1	655	Malacolimax tenellus
150	ON123531.1	655	Lehmannia rupicola
151	ON123532.1	655	Lehmannia marginata
152	ON123535.1	655	Lehmannia marginata
153	ON602091.1	655	Lehmannia macroflagellata
154	ON602092.1	655	Lehmannia macroflagellata
155	ON602093.1	655	Lehmannia marginata
156	ON602095.1	655	Lehmannia marginata
157	PP592759.1	655	Lehmannia marginata
158	PP592760.1	655	Lehmannia marginata
159	PP592761.1	655	Lehmannia marginata
160	PP592762.1	655	Lehmannia marginata
161	PP592763.1	655	Lehmannia marginata
162	PP592764.1	655	Lehmannia marginata
163	PP592765.1	655	Lehmannia carpatica
164	PP592766.1	655	Lehmannia carpatica
165	PV478749.1	655	Ambigolimax/Malacolimax wiktori
166	PQ428074.1	655	Bielzia coerulans
167	PQ428077.1	655	Bielzia coerulans
168	MF983181.1	655	Limacus flavus
169	MF983109.1	655	Limacus flavus
170	MF983058.1	655	Limacus flavus
171	MF983097.1	655	Limacus flavus
172	GQ145539.1	612	Limax
173	GQ145575.1	615	Limax
174	GQ145553.1	613	Limax
175	PQ676334.1	655	Limax
176	GQ145519.1	613	Limax
177	GQ145573.1	615	Limax
178	GQ145572.1	615	Limax
179	FJ606483.1	654	Limax
180	JX435826.1	647	Limax
181	GQ145508.1	606	Limax
182	GQ145505.1	613	Limax
183	HQ203064.1	655	Limax
184	GQ145502.1	613	Limax
185	ON123541.1	655	Limax
186	FJ606477.1	654	Limax
187	JX435824.1	649	Limax
188	JX435879.1	631	Limax
189	JX435841.1	653	Limax
190	JX435858.1	572	Limax
191	JX435865.1	450	Limax
192	FJ606481.1	653	Limax
193	JX435873.1	593	Limax
194	MT975672.1	655	Limax
195	PV478729.1	593	Limax cinereoniger
196	MT827967.1	655	Krynickillus melanocephalus
197	PV478786.1	655	Ambigolimax parvipenis
198	PV478776.1	655	Ambigolimax valentianus
199	OP663298.1	655	Ambigolimax valentianus
200	MF982908.1	655	Ambigolimax valentianus
201	MG856342.1	655	Ambigolimax parvipenis
202	MG747678.1	655	Ambigolimax valentianus
203	KF894281.1	620	Ambigolimax valentianus
204	PV478775.1	596	Ambigolimax valentianus
205	ON123525.1	636	Lehmannia marginata
206	ON123536.1	655	Malacolimax tenellus
207	OQ642085.1	630	Ambigolimax valentianus
208	OQ642086.1	635	Ambigolimax valentianus
209	MF983087.1	655	Limacus flavus
210	MF983062.1	654	Limacus flavus
211	MF983060.1	654	Limacus flavus
212	FBGAS099-10	639	Lehmannia marginata
213	FBGAS066-10	655	Lehmannia marginata
214	LPRCM036-19	653	Lehmannia rupicola
215	MOSK042-22	655	Lehmannia marginata
216	LPRCM001-19	652	Ambigolimax waterstoni
217	LPRCM002-19	652	Ambigolimax waterstoni
218	FBGAS392-11	655	Malacolimax tenellus
219	PQ327558.1	655	Ambigolimax parvipenis

